Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LAMC3_chr9_131004174_131099473	131022215	A A	AACACACA others(15): Show AACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01346.hp1 HG02135.hp2 HG02886.hp2 others(3): Show HG01346.hp1 HG02135.hp2 HG02886.hp2 HG03704.hp2 NA18961.hp1 NA19070.hp1	a0002 a0019 a0020 others(2): Show a0002 a0019 a0020 a0031 a0085	a0002c0001 a0019c0160 a0020c0006 others(3): Show a0002c0001 a0019c0160 a0020c0006 a0020c0169 a0031c0025 a0085c0170	a0002c0001t0001 a0019c0160t0002 a0020c0006t0017 others(3): Show a0002c0001t0001 a0019c0160t0002 a0020c0006t0017 a0020c0169t0003 a0031c0025t0001 a0085c0170t0037	a0002c0001t0001g0246 a0019c0160t0002g0091 a0020c0006t0017g0281 others(3): Show a0002c0001t0001g0246 a0019c0160t0002g0091 a0020c0006t0017g0281 a0020c0169t0003g0277 a0031c0025t0001g0276 a0085c0170t0037g0089	6	360	0.0167	22	c.374 others(39): Show c.374-4062_374-4041dupCACACACACACACACACACACA	LAMC3	ENSG00000050555.19	transcript	ENST00000361069.9	protein_coding	1/27		INFO_REALIGN_3_PRIME	chr9	TogoVar
LAMC3_chr9_131004174_131099473	131032535	T T	TCTCTCTC others(15): Show TCTCTCTCTCTTGCTCTCTCTCG	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp2 HG00642.hp1 others(68): Show HG00099.hp2 HG00280.hp2 HG00642.hp1 HG00738.hp1 HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp2 HG01169.hp2 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01258.hp1 HG01261.hp2 HG01346.hp2 HG01358.hp2 HG01361.hp1 HG01515.hp2 HG01516.hp1 HG01517.hp1 HG01517.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp2 HG01978.hp2 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02145.hp2 HG02280.hp1 HG02572.hp2 HG02602.hp1 HG02615.hp1 HG02698.hp2 HG02717.hp1 HG02965.hp1 HG03130.hp2 HG03239.hp2 HG03486.hp2 HG03516.hp2 HG03540.hp2 HG03654.hp2 HG03704.hp1 HG03710.hp2 HG03831.hp2 HG03927.hp1 HG03942.hp1 HG04115.hp1 HG04199.hp1 HG04204.hp2 NA18747.hp2 NA18906.hp2 NA18952.hp2 NA18971.hp1 NA18979.hp2 NA18986.hp1 NA19009.hp1 NA19030.hp1 NA19030.hp2 NA19058.hp1 NA19064.hp1 NA19070.hp2 NA19090.hp1 NA19091.hp1 NA19240.hp2 NA20129.hp2 NA20752.hp1 NA20905.hp2	a0001 a0003 a0004 others(29): Show a0001 a0003 a0004 a0005 a0006 a0007 a0008 a0009 a0012 a0014 a0019 a0021 a0022 a0023 a0028 a0030 a0031 a0032 a0037 a0038 a0042 a0047 a0050 a0060 a0066 a0067 a0074 a0079 a0082 a0083 a0091 a0095	a0001c0004 a0001c0011 a0001c0013 others(47): Show a0001c0004 a0001c0011 a0001c0013 a0003c0021 a0004c0002 a0005c0007 a0005c0016 a0005c0029 a0005c0175 a0006c0047 a0006c0048 a0006c0097 a0007c0028 a0007c0055 a0007c0179 a0008c0032 a0009c0008 a0009c0030 a0009c0187 a0012c0017 a0012c0053 a0012c0204 a0014c0049 a0019c0164 a0021c0052 a0021c0195 a0022c0056 a0022c0191 a0023c0044 a0023c0136 a0028c0144 a0030c0100 a0031c0025 a0032c0220 a0032c0221 a0037c0118 a0037c0129 a0038c0177 a0042c0054 a0047c0140 a0050c0106 a0060c0186 a0066c0190 a0067c0091 a0074c0192 a0079c0102 a0082c0198 a0083c0197 a0091c0193 a0095c0194	a0001c0004t0001 a0001c0011t0001 a0001c0013t0001 others(49): Show a0001c0004t0001 a0001c0011t0001 a0001c0013t0001 a0003c0021t0002 a0004c0002t0001 a0005c0007t0003 a0005c0016t0003 a0005c0016t0017 a0005c0029t0003 a0005c0175t0003 a0006c0047t0002 a0006c0048t0002 a0006c0097t0002 a0007c0028t0001 a0007c0055t0001 a0007c0179t0002 a0008c0032t0002 a0008c0032t0021 a0009c0008t0002 a0009c0030t0002 a0009c0187t0002 a0012c0017t0001 a0012c0053t0001 a0012c0204t0001 a0014c0049t0016 a0019c0164t0002 a0021c0052t0002 a0021c0195t0001 a0022c0056t0002 a0022c0191t0002 a0023c0044t0003 a0023c0136t0018 a0028c0144t0001 a0030c0100t0001 a0031c0025t0006 a0032c0220t0002 a0032c0221t0002 a0037c0118t0005 a0037c0129t0005 a0038c0177t0005 a0042c0054t0008 a0047c0140t0001 a0050c0106t0025 a0060c0186t0002 a0066c0190t0002 a0067c0091t0015 a0074c0192t0015 a0079c0102t0005 a0082c0198t0003 a0083c0197t0001 a0091c0193t0006 a0095c0194t0009	a0001c0004t0001g0344 a0001c0011t0001g0213 a0001c0011t0001g0216 others(68): Show a0001c0004t0001g0344 a0001c0011t0001g0213 a0001c0011t0001g0216 a0001c0011t0001g0217 a0001c0013t0001g0055 a0001c0013t0001g0125 a0001c0013t0001g0173 a0003c0021t0002g0156 a0004c0002t0001g0050 a0005c0007t0003g0300 a0005c0016t0003g0287 a0005c0016t0003g0299 a0005c0016t0003g0311 a0005c0016t0017g0286 a0005c0029t0003g0262 a0005c0029t0003g0263 a0005c0175t0003g0093 a0006c0047t0002g0215 a0006c0048t0002g0056 a0006c0097t0002g0214 a0007c0028t0001g0313 a0007c0028t0001g0314 a0007c0028t0001g0315 a0007c0055t0001g0098 a0007c0179t0002g0096 a0008c0032t0002g0025 a0008c0032t0002g0034 a0008c0032t0021g0033 a0009c0008t0002g0317 a0009c0008t0002g0319 a0009c0030t0002g0289 a0009c0030t0002g0318 a0009c0030t0002g0330 a0009c0187t0002g0076 a0012c0017t0001g0102 a0012c0017t0001g0301 a0012c0017t0001g0316 a0012c0017t0001g0320 a0012c0053t0001g0288 a0012c0053t0001g0292 a0012c0204t0001g0334 a0014c0049t0016g0346 a0019c0164t0002g0267 a0021c0052t0002g0293 a0021c0052t0002g0328 a0021c0195t0001g0331 a0022c0056t0002g0305 a0022c0191t0002g0099 a0023c0044t0003g0109 a0023c0136t0018g0211 a0028c0144t0001g0084 a0030c0100t0001g0243 a0031c0025t0006g0090 a0032c0220t0002g0032 a0032c0221t0002g0027 a0037c0118t0005g0203 a0037c0129t0005g0019 a0038c0177t0005g0304 a0042c0054t0008g0341 a0042c0054t0008g0342 a0047c0140t0001g0247 a0050c0106t0025g0001 a0060c0186t0002g0294 a0066c0190t0002g0312 a0067c0091t0015g0222 a0074c0192t0015g0104 a0079c0102t0005g0108 a0082c0198t0003g0285 a0083c0197t0001g0323 a0091c0193t0006g0103 a0095c0194t0009g0343	71	360	0.1972	22	c.809 others(37): Show c.809+385_809+406dupCTCTCTCTTGCTCTCTCTCGCT	LAMC3	ENSG00000050555.19	transcript	ENST00000361069.9	protein_coding	3/27		INFO_REALIGN_3_PRIME	chr9	TogoVar
LAMC3_chr9_131004174_131099473	131046518	A A	ATTTTTTT others(15): Show ATTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00323.hp1 HG01070.hp2 others(3): Show HG00099.hp1 HG00323.hp1 HG01070.hp2 HG01081.hp2 NA19065.hp1 NA20905.hp1	a0005 a0010 a0020 a0005 a0010 a0020	a0005c0007 a0010c0005 a0010c0042 others(2): Show a0005c0007 a0010c0005 a0010c0042 a0010c0132 a0020c0006	a0005c0007t0003 a0010c0005t0003 a0010c0042t0011 others(2): Show a0005c0007t0003 a0010c0005t0003 a0010c0042t0011 a0010c0132t0029 a0020c0006t0003	a0005c0007t0003g0335 a0010c0005t0003g0145 a0010c0042t0011g0015 others(3): Show a0005c0007t0003g0335 a0010c0005t0003g0145 a0010c0042t0011g0015 a0010c0132t0029g0140 a0020c0006t0003g0332 a0020c0006t0003g0333	6	360	0.0167	22	c.151 others(39): Show c.1519+863_1519+884dupTTTTTTTTTTTTTTTTTTTTTT	LAMC3	ENSG00000050555.19	transcript	ENST00000361069.9	protein_coding	8/27		INFO_REALIGN_3_PRIME	chr9	TogoVar
LAMC3_chr9_131004174_131099473	131047165	C C	CTTTTTTT others(15): Show CTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02896.hp2 HG03041.hp1 others(3): Show HG02559.hp2 HG02896.hp2 HG03041.hp1 NA18984.hp1 NA18986.hp2 NA18994.hp2	a0001 a0014 a0018 a0001 a0014 a0018	a0001c0015 a0014c0022 a0014c0125 others(2): Show a0001c0015 a0014c0022 a0014c0125 a0018c0009 a0018c0084	a0001c0015t0001 a0014c0022t0002 a0014c0125t0002 others(2): Show a0001c0015t0001 a0014c0022t0002 a0014c0125t0002 a0018c0009t0001 a0018c0084t0001	a0001c0015t0001g0124 a0014c0022t0002g0196 a0014c0022t0002g0201 others(3): Show a0001c0015t0001g0124 a0014c0022t0002g0196 a0014c0022t0002g0201 a0014c0125t0002g0132 a0018c0009t0001g0259 a0018c0084t0001g0241	6	360	0.0167	22	c.151 others(41): Show c.1519+1522_1519+1523insTTTTTTTTTTTTTTTTTTTTTT	LAMC3	ENSG00000050555.19	transcript	ENST00000361069.9	protein_coding	8/27		INFO_REALIGN_3_PRIME	chr9	TogoVar
LAMP3_chr3_183117215_183167734	183149574	A A	AAAAAATA others(15): Show AAAAAATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18945.hp1 NA18945.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0066 a0001c0003t0002g0066	1	372	0.0027	22	c.888 others(39): Show c.888+2800_888+2801insATATATATATATATATATTTTT	LAMP3	ENSG00000078081.8	transcript	ENST00000265598.8	protein_coding	3/5			chr3	TogoVar
LAMP5_chr20_9509590_9535524	9517621	A A	ATGTGTGT others(15): Show ATGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00544.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0339 a0002c0002t0001g0339	1	448	0.0022	22	c.476 others(37): Show c.476-404_476-403insGTGTGTGTGTGTGTGTGTGTGT	LAMP5	ENSG00000125869.10	transcript	ENST00000246070.3	protein_coding	4/5		INFO_REALIGN_3_PRIME	chr20	TogoVar
LAP3_chr4_17572198_17612970	17573730	G G	GTGTGTGT others(15): Show GTGTGTGTGTGTGTGTATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03579.hp2 NA18998.hp2 NA19056.hp1 HG03579.hp2 NA18998.hp2 NA19056.hp1	a0001 a0001	a0001c0001 a0001c0008 a0001c0001 a0001c0008	a0001c0001t0004 a0001c0008t0002 a0001c0001t0004 a0001c0008t0002	a0001c0001t0004g0016 a0001c0008t0002g0217 a0001c0001t0004g0016 a0001c0008t0002g0217	3	300	0.0100	22	c.-37 others(33): Show c.-3736_-3735insTGTGTGTGTGTGTGTATATATA	LAP3	ENSG00000002549.13	transcript	ENST00000226299.9	protein_coding		3467		chr4	TogoVar
LAP3_chr4_17572198_17612970	17573730	G G	GTGTGTGT others(15): Show GTGTGTGTGTGTGTGTGTATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19000.hp2 NA19058.hp2 NA19000.hp2 NA19058.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0221 a0001c0001t0004g0226 a0001c0001t0004g0221 a0001c0001t0004g0226	2	300	0.0067	22	c.-37 others(33): Show c.-3736_-3735insTGTGTGTGTGTGTGTGTATATA	LAP3	ENSG00000002549.13	transcript	ENST00000226299.9	protein_coding		3467		chr4	TogoVar
LAPTM4B_chr8_97770788_97858013	97781278	C C	CTTTTTTT others(15): Show CTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG02809.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0008 a0001c0001t0006g0008	1	380	0.0026	22	c.99+ others(37): Show c.99+5191_99+5192insTTTTTTTTTTTTTTTTTTTTTT	LAPTM4B	ENSG00000104341.17	transcript	ENST00000521545.7	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr8	TogoVar
LAPTM4B_chr8_97770788_97858013	97834144	G G	GAAAAAAA others(15): Show GAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01934.hp1 HG01934.hp2 HG01981.hp1 others(7): Show HG01934.hp1 HG01934.hp2 HG01981.hp1 HG02273.hp2 HG02976.hp2 HG03540.hp2 NA18977.hp1 NA18988.hp2 NA18995.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0007 a0001c0001t0001 a0001c0001t0005 a0001c0001t0007	a0001c0001t0001g0061 a0001c0001t0001g0069 a0001c0001t0001g0102 others(7): Show a0001c0001t0001g0061 a0001c0001t0001g0069 a0001c0001t0001g0102 a0001c0001t0001g0104 a0001c0001t0001g0112 a0001c0001t0001g0263 a0001c0001t0005g0007 a0001c0001t0005g0145 a0001c0001t0005g0159 a0001c0001t0007g0172	10	380	0.0263	22	c.603 others(39): Show c.603+9005_603+9006insAAAAAAAAAAAAAAAAAAAAAA	LAPTM4B	ENSG00000104341.17	transcript	ENST00000521545.7	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr8	TogoVar
LAPTM4B_chr8_97770788_97858013	97850465	G G	GGGGTGTG others(15): Show GGGGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0018 a0001c0002t0018	a0001c0002t0018g0166 a0001c0002t0018g0166	1	380	0.0026	22	c.604 others(37): Show c.604-931_604-930insGGTGTGTGTGTGTGTGTGTGTG	LAPTM4B	ENSG00000104341.17	transcript	ENST00000521545.7	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr8	TogoVar
LAPTM4B_chr8_97770788_97858013	97850474	G G	GTGTGTGT others(15): Show GTGTGTGTGTGTGTGTGTGTGTA	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG00609.hp1 HG00642.hp1 others(55): Show HG00558.hp2 HG00609.hp1 HG00642.hp1 HG00733.hp2 HG01099.hp1 HG01167.hp2 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01243.hp2 HG01515.hp1 HG01952.hp2 HG01978.hp1 HG02015.hp2 HG02027.hp2 HG02056.hp1 HG02132.hp1 HG02451.hp2 HG02615.hp1 HG02895.hp2 HG03130.hp2 HG03239.hp2 HG03471.hp1 HG03710.hp1 HG03831.hp2 HG03942.hp1 NA18747.hp2 NA18939.hp1 NA18940.hp1 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp2 NA18960.hp2 NA18975.hp1 NA18977.hp2 NA18982.hp1 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18986.hp1 NA18988.hp1 NA18995.hp2 NA18999.hp1 NA19005.hp1 NA19010.hp1 NA19054.hp1 NA19067.hp1 NA19077.hp1 NA19079.hp1 NA19088.hp1 NA20129.hp1 NA20129.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0001t0007 a0001c0001t0024 others(5): Show a0001c0001t0003 a0001c0001t0007 a0001c0001t0024 a0001c0001t0031 a0001c0001t0032 a0001c0001t0036 a0001c0002t0009 a0001c0002t0020	a0001c0001t0003g0001 a0001c0001t0003g0033 a0001c0001t0003g0060 others(55): Show a0001c0001t0003g0001 a0001c0001t0003g0033 a0001c0001t0003g0060 a0001c0001t0003g0065 a0001c0001t0003g0070 a0001c0001t0003g0085 a0001c0001t0003g0086 a0001c0001t0003g0091 a0001c0001t0003g0138 a0001c0001t0003g0139 a0001c0001t0003g0141 a0001c0001t0003g0149 a0001c0001t0003g0155 a0001c0001t0003g0160 a0001c0001t0003g0257 a0001c0001t0003g0267 a0001c0001t0003g0274 a0001c0001t0003g0278 a0001c0001t0003g0281 a0001c0001t0003g0285 a0001c0001t0003g0286 a0001c0001t0003g0296 a0001c0001t0003g0297 a0001c0001t0003g0308 a0001c0001t0003g0311 a0001c0001t0003g0314 a0001c0001t0003g0315 a0001c0001t0003g0323 a0001c0001t0003g0324 a0001c0001t0003g0327 a0001c0001t0003g0331 a0001c0001t0003g0334 a0001c0001t0003g0342 a0001c0001t0003g0347 a0001c0001t0003g0354 a0001c0001t0003g0356 a0001c0001t0007g0032 a0001c0001t0007g0171 a0001c0001t0007g0179 a0001c0001t0007g0183 a0001c0001t0007g0185 a0001c0001t0007g0196 a0001c0001t0007g0210 a0001c0001t0007g0229 a0001c0001t0007g0370 a0001c0001t0024g0201 a0001c0001t0024g0202 a0001c0001t0031g0031 a0001c0001t0032g0318 a0001c0001t0036g0123 a0001c0002t0009g0169 a0001c0002t0009g0251 a0001c0002t0009g0252 a0001c0002t0009g0375 a0001c0002t0009g0377 a0001c0002t0009g0378 a0001c0002t0020g0376 a0001c0002t0020g0379	58	380	0.1526	22	c.604 others(37): Show c.604-908_604-907insGTGTGTATGTGTGTGTGTGTGT	LAPTM4B	ENSG00000104341.17	transcript	ENST00000521545.7	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr8	TogoVar
LAPTM4B_chr8_97770788_97858013	97850476	G G	GTGTGTGT others(15): Show GTGTGTGTGTGTGTGTGTGTGTA	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00280.hp2 HG00323.hp1 others(80): Show HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00423.hp2 HG00438.hp2 HG00544.hp1 HG00609.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp2 HG00673.hp2 HG00738.hp1 HG01070.hp2 HG01081.hp1 HG01081.hp2 HG01106.hp2 HG01123.hp1 HG01175.hp2 HG01192.hp1 HG01256.hp2 HG01358.hp1 HG01361.hp1 HG01433.hp2 HG01496.hp1 HG01884.hp1 HG01952.hp1 HG01993.hp2 HG02109.hp1 HG02129.hp1 HG02257.hp1 HG02258.hp1 HG02486.hp2 HG02559.hp1 HG02818.hp2 HG02895.hp1 HG02896.hp1 HG02897.hp1 HG02976.hp1 HG03041.hp2 HG03098.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp1 HG03453.hp2 HG03540.hp1 HG03654.hp1 HG03710.hp2 HG03942.hp2 HG04184.hp1 HG04204.hp2 HG04228.hp1 NA18612.hp2 NA18747.hp1 NA18906.hp2 NA18942.hp2 NA18944.hp1 NA18953.hp1 NA18954.hp1 NA18959.hp1 NA18960.hp1 NA18962.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18971.hp1 NA19005.hp2 NA19010.hp2 NA19011.hp1 NA19030.hp1 NA19054.hp2 NA19058.hp1 NA19060.hp1 NA19065.hp1 NA19065.hp2 NA19070.hp1 NA19084.hp2 NA19085.hp2 NA19087.hp1 NA19090.hp2 NA19091.hp1 NA20300.hp1 NA20752.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0002 a0001c0001t0010 a0001c0001t0011 others(7): Show a0001c0001t0002 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0016 a0001c0001t0023 a0001c0001t0028 a0001c0002t0017 a0001c0002t0019 a0001c0004t0012	a0001c0001t0002g0004 a0001c0001t0002g0010 a0001c0001t0002g0039 others(80): Show a0001c0001t0002g0004 a0001c0001t0002g0010 a0001c0001t0002g0039 a0001c0001t0002g0043 a0001c0001t0002g0068 a0001c0001t0002g0080 a0001c0001t0002g0082 a0001c0001t0002g0117 a0001c0001t0002g0118 a0001c0001t0002g0121 a0001c0001t0002g0122 a0001c0001t0002g0140 a0001c0001t0002g0150 a0001c0001t0002g0152 a0001c0001t0002g0157 a0001c0001t0002g0259 a0001c0001t0002g0260 a0001c0001t0002g0261 a0001c0001t0002g0265 a0001c0001t0002g0266 a0001c0001t0002g0268 a0001c0001t0002g0269 a0001c0001t0002g0271 a0001c0001t0002g0277 a0001c0001t0002g0283 a0001c0001t0002g0284 a0001c0001t0002g0287 a0001c0001t0002g0288 a0001c0001t0002g0290 a0001c0001t0002g0299 a0001c0001t0002g0301 a0001c0001t0002g0303 a0001c0001t0002g0304 a0001c0001t0002g0305 a0001c0001t0002g0310 a0001c0001t0002g0312 a0001c0001t0002g0316 a0001c0001t0002g0322 a0001c0001t0002g0326 a0001c0001t0002g0328 a0001c0001t0002g0329 a0001c0001t0002g0332 a0001c0001t0002g0336 a0001c0001t0002g0340 a0001c0001t0002g0345 a0001c0001t0002g0348 a0001c0001t0002g0358 a0001c0001t0002g0359 a0001c0001t0002g0360 a0001c0001t0002g0364 a0001c0001t0002g0366 a0001c0001t0002g0367 a0001c0001t0002g0368 a0001c0001t0002g0369 a0001c0001t0010g0180 a0001c0001t0010g0181 a0001c0001t0010g0187 a0001c0001t0010g0195 a0001c0001t0010g0203 a0001c0001t0011g0034 a0001c0001t0011g0058 a0001c0001t0011g0073 a0001c0001t0011g0110 a0001c0001t0011g0280 a0001c0001t0011g0282 a0001c0001t0011g0349 a0001c0001t0012g0130 a0001c0001t0012g0131 a0001c0001t0012g0194 a0001c0001t0012g0357 a0001c0001t0016g0135 a0001c0001t0016g0276 a0001c0001t0016g0339 a0001c0001t0016g0352 a0001c0001t0023g0211 a0001c0001t0023g0221 a0001c0001t0028g0363 a0001c0002t0017g0239 a0001c0002t0017g0240 a0001c0002t0019g0165 a0001c0002t0019g0247 a0001c0004t0012g0219 a0001c0004t0012g0238	83	380	0.2184	22	c.604 others(37): Show c.604-908_604-907insGTGTGTGTATGTGTGTGTGTGT	LAPTM4B	ENSG00000104341.17	transcript	ENST00000521545.7	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr8	TogoVar
LARGE1_chr22_33267509_33925476	33396463	C C	CAGAGAGA others(15): Show CAGAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0076 a0001c0001t0005g0076	1	110	0.0091	22	c.893 others(41): Show c.893-12181_893-12160dupCTCTCTCTCTCTCTCTCTCTCT	LARGE1	ENSG00000133424.22	transcript	ENST00000397394.8	protein_coding	7/14			chr22	TogoVar
LARGE1_chr22_33267509_33925476	33651225	C C	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG03516.hp1 HG02486.hp2 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0007 a0001c0002t0001 a0001c0001t0007 a0001c0002t0001	a0001c0001t0007g0046 a0001c0002t0001g0039 a0001c0001t0007g0046 a0001c0002t0001g0039	2	110	0.0182	22	c.107 others(37): Show c.107-558_107-557insTTTTTTTTTTTTTTTTTTTTTT	LARGE1	ENSG00000133424.22	transcript	ENST00000397394.8	protein_coding	2/14			chr22	TogoVar
LARGE1_chr22_33267509_33925476	33865832	C C	CTTTTTTT others(15): Show CTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02647.hp2 HG02055.hp1 HG02647.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0007 a0001c0001t0001 a0001c0001t0007	a0001c0001t0001g0072 a0001c0001t0007g0070 a0001c0001t0001g0072 a0001c0001t0007g0070	2	110	0.0182	22	c.-83 others(41): Show c.-83+54141_-83+54162dupAAAAAAAAAAAAAAAAAAAAAA	LARGE1	ENSG00000133424.22	transcript	ENST00000397394.8	protein_coding	1/14			chr22	TogoVar
LARGE1_chr22_33267509_33925476	33878129	C C	CTTTTTTT others(15): Show CTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG00741.hp2	a0001 a0001	a0001c0014 a0001c0014	a0001c0014t0012 a0001c0014t0012	a0001c0014t0012g0086 a0001c0014t0012g0086	1	110	0.0091	22	c.-83 others(41): Show c.-83+41844_-83+41865dupAAAAAAAAAAAAAAAAAAAAAA	LARGE1	ENSG00000133424.22	transcript	ENST00000397394.8	protein_coding	1/14			chr22	TogoVar
LARP1B_chr4_128056312_128216988	128098747	G G	GTGTATAT others(15): Show GTGTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0002 a0002	a0002c0012 a0002c0012	a0002c0012t0005 a0002c0012t0005	a0002c0012t0005g0098 a0002c0012t0005g0098	1	336	0.0030	22	c.813 others(37): Show c.813+418_813+419insGTATATATATATATATATATAT	LARP1B	ENSG00000138709.20	transcript	ENST00000326639.11	protein_coding	8/19		INFO_REALIGN_3_PRIME	chr4	TogoVar
LARP1B_chr4_128056312_128216988	128098747	G G	GTGTGTAT others(15): Show GTGTGTATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02630.hp2 NA18941.hp2 HG02630.hp2 NA18941.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0179 a0001c0001t0001g0190 a0001c0001t0001g0179 a0001c0001t0001g0190	2	336	0.0060	22	c.813 others(37): Show c.813+418_813+419insGTGTATATATATATATATATAT	LARP1B	ENSG00000138709.20	transcript	ENST00000326639.11	protein_coding	8/19		INFO_REALIGN_3_PRIME	chr4	TogoVar
LARP1B_chr4_128056312_128216988	128098747	G G	GTGTGTGT others(15): Show GTGTGTGTATATATATATATATA	intron_variant intron_variant	MODIFIER	NA20129.hp2 NA21309.hp1 NA20129.hp2 NA21309.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0007 a0001c0001 a0004c0007	a0001c0001t0001 a0004c0007t0009 a0001c0001t0001 a0004c0007t0009	a0001c0001t0001g0170 a0004c0007t0009g0204 a0001c0001t0001g0170 a0004c0007t0009g0204	2	336	0.0060	22	c.813 others(37): Show c.813+418_813+419insGTGTGTATATATATATATATAT	LARP1B	ENSG00000138709.20	transcript	ENST00000326639.11	protein_coding	8/19		INFO_REALIGN_3_PRIME	chr4	TogoVar
LARP1B_chr4_128056312_128216988	128098747	G G	GTGTGTGT others(15): Show GTGTGTGTGTATATATATATATA	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0133 a0001c0001t0007g0133	1	336	0.0030	22	c.813 others(37): Show c.813+418_813+419insGTGTGTGTATATATATATATAT	LARP1B	ENSG00000138709.20	transcript	ENST00000326639.11	protein_coding	8/19		INFO_REALIGN_3_PRIME	chr4	TogoVar
LARP1B_chr4_128056312_128216988	128110676	C C	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01256.hp2 HG01258.hp1 HG03471.hp1 others(3): Show HG01256.hp2 HG01258.hp1 HG03471.hp1 HG03471.hp2 NA18969.hp1 NA19240.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0023 a0002c0002t0002g0041 a0002c0002t0002g0052 others(3): Show a0002c0002t0002g0023 a0002c0002t0002g0041 a0002c0002t0002g0052 a0002c0002t0002g0075 a0002c0002t0002g0076 a0002c0002t0002g0078	6	336	0.0179	22	c.988 others(39): Show c.988+3380_988+3381insAAAAAAAAAAAAAAAAAAAAAA	LARP1B	ENSG00000138709.20	transcript	ENST00000326639.11	protein_coding	9/19		INFO_REALIGN_3_PRIME	chr4	TogoVar
LARP1B_chr4_128056312_128216988	128129164	C C	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18959.hp2 NA18959.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0011 a0002c0002t0011	a0002c0002t0011g0042 a0002c0002t0011g0042	1	336	0.0030	22	c.152 others(41): Show c.1524+6995_1524+7016dupAAAAAAAAAAAAAAAAAAAAAA	LARP1B	ENSG00000138709.20	transcript	ENST00000326639.11	protein_coding	11/19		INFO_REALIGN_3_PRIME	chr4	TogoVar
LARP1B_chr4_128056312_128216988	128143796	G G	GGTGTGTG others(15): Show GGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG01074.hp1 HG01256.hp1 others(14): Show HG00673.hp1 HG01074.hp1 HG01256.hp1 HG01258.hp2 HG02074.hp1 HG02523.hp1 HG02647.hp1 HG02965.hp1 HG06807.hp2 NA18943.hp2 NA18945.hp1 NA18946.hp1 NA18959.hp1 NA18964.hp1 NA18991.hp2 NA19012.hp1 NA19066.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0002 a0001c0001t0001g0110 a0001c0001t0001g0143 others(14): Show a0001c0001t0001g0002 a0001c0001t0001g0110 a0001c0001t0001g0143 a0001c0001t0001g0145 a0001c0001t0001g0148 a0001c0001t0001g0154 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0181 a0001c0001t0001g0185 a0001c0001t0001g0188 a0001c0001t0001g0198 a0001c0001t0001g0263 a0001c0001t0001g0274 a0001c0001t0003g0232 a0001c0001t0003g0241 a0001c0001t0003g0243	17	336	0.0506	22	c.152 others(43): Show c.1525-18397_1525-18376dupGTGTGTGTGTGTGTGTGTGTGT	LARP1B	ENSG00000138709.20	transcript	ENST00000326639.11	protein_coding	11/19		INFO_REALIGN_3_PRIME	chr4	TogoVar
LARP1B_chr4_128056312_128216988	128178035	G G	GATATATA others(15): Show GATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18955.hp2 NA18955.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0312 a0001c0001t0004g0312	1	336	0.0030	22	c.168 others(39): Show c.1685-392_1685-371dupTATATATATATATATATATATA	LARP1B	ENSG00000138709.20	transcript	ENST00000326639.11	protein_coding	13/19		INFO_REALIGN_3_PRIME	chr4	TogoVar
LARP1_chr5_154750377_154822605	154796084	A A	ATATATAT others(15): Show ATATATATATTTTATATATTTAT	intron_variant intron_variant	MODIFIER	HG01978.hp1 HG01978.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0150 a0001c0001t0001g0150	1	304	0.0033	22	c.137 others(39): Show c.1377+766_1377+787dupTATATATATTTTATATATTTAT	LARP1	ENSG00000155506.19	transcript	ENST00000518297.6	protein_coding	8/18		INFO_REALIGN_3_PRIME	chr5	TogoVar
LARP4_chr12_50395885_50485004	50420947	C C	CTTTTTTT others(15): Show CTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02258.hp2 NA18906.hp2 HG02258.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0146 a0001c0001t0005g0148 a0001c0001t0005g0146 a0001c0001t0005g0148	2	318	0.0063	22	c.19- others(37): Show c.19-6798_19-6797insTTTTTTTTTTTTTTTTTTTTTT	LARP4	ENSG00000161813.23	transcript	ENST00000398473.7	protein_coding	1/15		INFO_REALIGN_3_PRIME	chr12	TogoVar
LARP4_chr12_50395885_50485004	50446429	A A	ATATATAT others(15): Show ATATATATATATATATATATTTT	intron_variant intron_variant	MODIFIER	NA19011.hp2 NA19011.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0225 a0001c0001t0001g0225	1	318	0.0031	22	c.804 others(39): Show c.804+4787_804+4788insATATATATATATATATATTTTT	LARP4	ENSG00000161813.23	transcript	ENST00000398473.7	protein_coding	8/15		INFO_REALIGN_3_PRIME	chr12	TogoVar
LARS2_chr3_45383576_45554407	45484618	A A	AATATATA others(15): Show AATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02155.hp1 NA19009.hp2 HG02155.hp1 NA19009.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0004 a0001c0002t0001 a0001c0002t0004	a0001c0002t0001g0042 a0001c0002t0004g0165 a0001c0002t0001g0042 a0001c0002t0004g0165	2	242	0.0083	22	c.101 others(41): Show c.1019-1073_1019-1072insTATATATATATATATATATATA	LARS2	ENSG00000011376.12	transcript	ENST00000645846.2	protein_coding	10/21		INFO_REALIGN_3_PRIME	chr3	TogoVar
LARS2_chr3_45383576_45554407	45484620	A A	AATATATA others(15): Show AATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02897.hp1 HG02896.hp2 HG02897.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0142 a0001c0002t0003g0162 a0001c0002t0003g0142 a0001c0002t0003g0162	2	242	0.0083	22	c.101 others(41): Show c.1019-1071_1019-1070insTATATATATATATATATATATA	LARS2	ENSG00000011376.12	transcript	ENST00000645846.2	protein_coding	10/21		INFO_REALIGN_3_PRIME	chr3	TogoVar
LARS2_chr3_45383576_45554407	45484622	A A	AATATATA others(15): Show AATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01952.hp2 HG03491.hp2 HG01952.hp2 HG03491.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0039 a0001c0002t0001g0230 a0001c0001t0001g0039 a0001c0002t0001g0230	2	242	0.0083	22	c.101 others(41): Show c.1019-1069_1019-1068insTATATATATATATATATATATA	LARS2	ENSG00000011376.12	transcript	ENST00000645846.2	protein_coding	10/21		INFO_REALIGN_3_PRIME	chr3	TogoVar
LARS2_chr3_45383576_45554407	45484626	A A	AATATATA others(15): Show AATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02273.hp1 HG02273.hp1	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0001 a0001c0008t0001	a0001c0008t0001g0053 a0001c0008t0001g0053	1	242	0.0041	22	c.101 others(41): Show c.1019-1065_1019-1064insTATATATATATATATATATATA	LARS2	ENSG00000011376.12	transcript	ENST00000645846.2	protein_coding	10/21		INFO_REALIGN_3_PRIME	chr3	TogoVar
LARS2_chr3_45383576_45554407	45484628	A A	AATATATA others(15): Show AATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01261.hp1 NA18954.hp1 NA20752.hp2 HG01261.hp1 NA18954.hp1 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0001 a0001c0001t0003 a0001c0001t0004	a0001c0001t0001g0196 a0001c0001t0003g0143 a0001c0001t0004g0174 a0001c0001t0001g0196 a0001c0001t0003g0143 a0001c0001t0004g0174	3	242	0.0124	22	c.101 others(41): Show c.1019-1063_1019-1062insTATATATATATATATATATATA	LARS2	ENSG00000011376.12	transcript	ENST00000645846.2	protein_coding	10/21		INFO_REALIGN_3_PRIME	chr3	TogoVar
LARS2_chr3_45383576_45554407	45484630	A A	AAAAAATA others(15): Show AAAAAATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA20129.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0036 a0001c0001t0001g0036	1	242	0.0041	22	c.101 others(41): Show c.1019-1061_1019-1060insAAAATATATATATATATATATA	LARS2	ENSG00000011376.12	transcript	ENST00000645846.2	protein_coding	10/21		INFO_REALIGN_3_PRIME	chr3	TogoVar
LARS2_chr3_45383576_45554407	45484630	A A	AATATATA others(15): Show AATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG02976.hp2 HG00609.hp2 HG02976.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0014 a0001c0003t0005 a0001c0001t0014 a0001c0003t0005	a0001c0001t0014g0148 a0001c0003t0005g0205 a0001c0001t0014g0148 a0001c0003t0005g0205	2	242	0.0083	22	c.101 others(41): Show c.1019-1044_1019-1043insATATATATATATATATATATAT	LARS2	ENSG00000011376.12	transcript	ENST00000645846.2	protein_coding	10/21		INFO_REALIGN_3_PRIME	chr3	TogoVar
LASP1_chr17_38865058_38926770	38875056	C C	CGTGTGTG others(15): Show CGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG02129.hp2 HG02922.hp1 others(4): Show HG00438.hp1 HG02129.hp2 HG02922.hp1 HG03579.hp2 NA18966.hp1 NA18967.hp2 NA19057.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0006 a0001c0007	a0001c0001t0014 a0001c0002t0002 a0001c0002t0003 others(3): Show a0001c0001t0014 a0001c0002t0002 a0001c0002t0003 a0001c0003t0001 a0001c0006t0005 a0001c0007t0002	a0001c0001t0014g0269 a0001c0002t0002g0232 a0001c0002t0002g0233 others(4): Show a0001c0001t0014g0269 a0001c0002t0002g0232 a0001c0002t0002g0233 a0001c0002t0003g0252 a0001c0003t0001g0230 a0001c0006t0005g0231 a0001c0007t0002g0270	7	396	0.0177	22	c.70- others(37): Show c.70-3018_70-2997dupTGTGTGTGTGTGTGTGTGTGTG	LASP1	ENSG00000002834.19	transcript	ENST00000318008.11	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr17	TogoVar
LASP1_chr17_38865058_38926770	38875071	G G	GTGTGTGT others(15): Show GTGTGTGTGTGTGTGTGTGTGTA	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG01884.hp2 HG01934.hp1 others(4): Show HG00733.hp1 HG01884.hp2 HG01934.hp1 HG02145.hp1 HG03486.hp1 HG03654.hp2 NA18994.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0013 a0001c0001 a0001c0002 a0001c0013	a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 others(3): Show a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 a0001c0002t0003 a0001c0002t0004 a0001c0013t0016	a0001c0001t0001g0390 a0001c0001t0003g0030 a0001c0001t0003g0031 others(4): Show a0001c0001t0001g0390 a0001c0001t0003g0030 a0001c0001t0003g0031 a0001c0002t0001g0369 a0001c0002t0003g0343 a0001c0002t0004g0259 a0001c0013t0016g0094	7	396	0.0177	22	c.70- others(37): Show c.70-2997_70-2996insTGTATGTGTGTGTGTGTGTGTG	LASP1	ENSG00000002834.19	transcript	ENST00000318008.11	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr17	TogoVar
LAT2_chr7_74205006_74234834	74214377	A A	AATATATA others(15): Show AATATATATATATATATATGAAC	intron_variant intron_variant	MODIFIER	HG02602.hp2 HG02602.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0247 a0001c0001t0001g0247	1	344	0.0029	22	c.-21 others(39): Show c.-218-434_-218-433insTATATATGAACATATATATATA	LAT2	ENSG00000086730.17	transcript	ENST00000460943.6	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr7	TogoVar
LATS2_chr13_20968036_21066586	21059516	A A	ACAGGAGA others(15): Show ACAGGAGAGAGGTTGCAGAGTTG	intron_variant intron_variant	MODIFIER	NA19058.hp2 NA19058.hp2	a0002 a0002	a0002c0006 a0002c0006	a0002c0006t0004 a0002c0006t0004	a0002c0006t0004g0164 a0002c0006t0004g0164	1	316	0.0032	22	c.-20 others(41): Show c.-205+1829_-205+1830insCAACTCTGCAACCTCTCTCCTG	LATS2	ENSG00000150457.9	transcript	ENST00000382592.5	protein_coding	1/7			chr13	TogoVar
LAX1_chr1_203760183_203781372	203770429	A A	AAGAGAGA others(15): Show AAGAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG01975.hp2 HG01975.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0399 a0001c0001t0003g0399	1	422	0.0024	22	c.90- others(35): Show c.90-396_90-395insGAGAGAGAGAGAGAGAGAGAGA	LAX1	ENSG00000122188.13	transcript	ENST00000442561.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr1	TogoVar
LAX1_chr1_203760183_203781372	203770433	A A	AAGAGAGA others(15): Show AAGAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01257.hp2 HG02027.hp2 others(7): Show HG01106.hp1 HG01257.hp2 HG02027.hp2 NA18612.hp1 NA18952.hp2 NA18965.hp2 NA18977.hp1 NA18983.hp2 NA19060.hp1 NA19064.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0190 a0001c0001t0001g0201 a0001c0001t0001g0218 others(7): Show a0001c0001t0001g0190 a0001c0001t0001g0201 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0227 a0001c0001t0001g0242 a0001c0001t0001g0263 a0001c0001t0001g0264 a0001c0001t0004g0236 a0001c0001t0004g0271	10	422	0.0237	22	c.90- others(35): Show c.90-374_90-373insGAGAGAGAGAGAGAGAGAGAGA	LAX1	ENSG00000122188.13	transcript	ENST00000442561.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr1	TogoVar
LAX1_chr1_203760183_203781372	203770557	G G	GAAGGAAA others(15): Show GAAGGAAAGAAAGAAAGAAAGAA	intron_variant intron_variant	MODIFIER	HG02083.hp2 NA19004.hp1 HG02083.hp2 NA19004.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0180 a0001c0001t0001g0234 a0001c0001t0001g0180 a0001c0001t0001g0234	2	422	0.0047	22	c.90- others(35): Show c.90-269_90-268insGGAAAGAAAGAAAGAAAGAAAA	LAX1	ENSG00000122188.13	transcript	ENST00000442561.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr1	TogoVar
LBH_chr2_30226534_30265028	30237432	C C	CGCTTCGA others(15): Show CGCTTCGAGGCATCCTCGATGAT	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02486.hp2 HG02622.hp1 others(10): Show HG02055.hp1 HG02486.hp2 HG02622.hp1 HG02647.hp1 HG02895.hp1 HG02895.hp2 HG02897.hp2 HG03017.hp2 HG03490.hp2 HG03540.hp1 HG03579.hp2 HG03669.hp1 HG03834.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0010 a0001c0001t0021 a0001c0002t0009	a0001c0001t0001g0042 a0001c0001t0001g0065 a0001c0001t0001g0066 others(10): Show a0001c0001t0001g0042 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0068 a0001c0001t0001g0286 a0001c0001t0002g0149 a0001c0001t0003g0168 a0001c0001t0003g0287 a0001c0001t0010g0150 a0001c0001t0010g0291 a0001c0001t0021g0293 a0001c0002t0009g0067 a0001c0002t0009g0069	13	396	0.0328	22	c.129 others(39): Show c.129+2934_129+2935insCATCCTCGATGATGCTTCGAGG	LBH	ENSG00000213626.13	transcript	ENST00000395323.9	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr2	TogoVar
LBH_chr2_30226534_30265028	30237433	G G	GCTTCGAG others(15): Show GCTTCGAGGCATCCTCGATGATA	intron_variant intron_variant	MODIFIER	HG02165.hp1 HG04184.hp2 NA18950.hp2 others(10): Show HG02165.hp1 HG04184.hp2 NA18950.hp2 NA18960.hp1 NA18972.hp1 NA18978.hp1 NA18984.hp1 NA18994.hp1 NA19003.hp1 NA19003.hp2 NA19079.hp2 NA19080.hp1 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0001c0001t0008 a0001c0001t0014	a0001c0001t0001g0175 a0001c0001t0001g0178 a0001c0001t0001g0179 others(10): Show a0001c0001t0001g0175 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0182 a0001c0001t0001g0187 a0001c0001t0001g0234 a0001c0001t0001g0288 a0001c0001t0002g0180 a0001c0001t0007g0181 a0001c0001t0007g0183 a0001c0001t0007g0184 a0001c0001t0008g0050 a0001c0001t0014g0177	13	396	0.0328	22	c.129 others(39): Show c.129+2934_129+2935insCATCCTCGATGATACTTCGAGG	LBH	ENSG00000213626.13	transcript	ENST00000395323.9	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr2	TogoVar
LBX1_chr10_101221994_101234463	101223601	C C	CCGGGTGC others(15): Show CCGGGTGCTAGTCCAGGCAGAGT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02523.hp1 HG03834.hp1 HG02523.hp1 HG03834.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	2	432	0.0046	22	c.36 others(33): Show c.3668_*3669insACTCTGCCTGGACTAGCACCCG	LBX1	ENSG00000138136.7	transcript	ENST00000370193.4	protein_coding		3392		chr10	TogoVar
LCA5L_chr21_39400728_39450778	39428578	T T	TTATATAT others(15): Show TTATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01943.hp1 HG02293.hp2 others(1): Show HG01070.hp2 HG01943.hp1 HG02293.hp2 HG03704.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0020 a0001c0001t0001g0048 a0001c0001t0001g0102 others(1): Show a0001c0001t0001g0020 a0001c0001t0001g0048 a0001c0001t0001g0102 a0001c0001t0001g0130	4	340	0.0118	22	c.-10 others(35): Show c.-10-76_-10-75insTATATATATATATATATATATA	LCA5L	ENSG00000157578.14	transcript	ENST00000288350.8	protein_coding	4/10			chr21	TogoVar
LCA5L_chr21_39400728_39450778	39428598	A A	ATATATAT others(15): Show ATATATATATATATATATATTTT	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01081.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0090 a0001c0001t0001g0090	1	340	0.0029	22	c.-10 others(35): Show c.-10-96_-10-95insAAAATATATATATATATATATA	LCA5L	ENSG00000157578.14	transcript	ENST00000288350.8	protein_coding	4/10			chr21	TogoVar
LCE2D_chr1_152658380_152669659	152669430	T T	TTGTGTGT others(15): Show TTGTGTGTGTGTGTGTGTGTGTG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA20300.hp2 NA20300.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0003 a0001c0003t0002g0003	1	374	0.0027	22	c.49 others(33): Show c.4992_*4993insTGTGTGTGTGTGTGTGTGTGTG	LCE2D	ENSG00000187223.4	transcript	ENST00000368784.2	protein_coding		4772		chr1	TogoVar
LCK_chr1_32246265_32291165	32272621	G G	GAGAGAGA others(15): Show GAGAGAGAAGAGAGAGAGAGAGA	intron_variant intron_variant	MODIFIER	NA18944.hp1 NA18944.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0151 a0001c0001t0001g0151	1	274	0.0037	22	c.-5- others(37): Show c.-5-1703_-5-1702insGAGAGAAGAGAGAGAGAGAGAA	LCK	ENSG00000182866.18	transcript	ENST00000336890.10	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr1	TogoVar
LCLAT1_chr2_30442246_30649225	30461770	C C	CCTTTTTT others(15): Show CCTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG00673.hp2 HG01346.hp2 others(22): Show HG00597.hp1 HG00673.hp2 HG01346.hp2 HG01928.hp1 HG01975.hp2 HG01978.hp1 HG02074.hp1 HG02572.hp2 HG02615.hp1 HG02622.hp2 HG03130.hp1 HG03579.hp1 HG03710.hp2 HG04228.hp2 NA18963.hp2 NA18984.hp2 NA18991.hp1 NA19010.hp2 NA19056.hp2 NA19060.hp1 NA19074.hp2 NA19077.hp2 NA19079.hp1 NA19084.hp2 NA19088.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0009 a0002c0002t0010 others(7): Show a0002c0002t0002 a0002c0002t0009 a0002c0002t0010 a0002c0002t0023 a0002c0002t0024 a0002c0002t0025 a0002c0002t0033 a0002c0002t0035 a0002c0002t0039 a0002c0002t0043	a0002c0002t0002g0032 a0002c0002t0002g0047 a0002c0002t0002g0049 others(21): Show a0002c0002t0002g0032 a0002c0002t0002g0047 a0002c0002t0002g0049 a0002c0002t0002g0050 a0002c0002t0002g0052 a0002c0002t0002g0053 a0002c0002t0002g0054 a0002c0002t0002g0056 a0002c0002t0002g0076 a0002c0002t0002g0077 a0002c0002t0002g0078 a0002c0002t0002g0086 a0002c0002t0002g0122 a0002c0002t0002g0123 a0002c0002t0009g0055 a0002c0002t0010g0001 a0002c0002t0010g0128 a0002c0002t0023g0084 a0002c0002t0024g0081 a0002c0002t0025g0057 a0002c0002t0033g0080 a0002c0002t0035g0048 a0002c0002t0039g0079 a0002c0002t0043g0051	25	366	0.0683	22	c.-5+ others(39): Show c.-5+14387_-5+14388insCTTTTTTTTTTTTTTTTTTTTT	LCLAT1	ENSG00000172954.14	transcript	ENST00000379509.8	protein_coding	1/5			chr2	TogoVar

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