view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LCLAT1_chr2_30442246_30649225 | 30521489 | C | CTTTTTTT others(15): Show |
intron_variant | MODIFIER | HG03041.hp1 NA19001.hp1 NA19074.hp1 |
a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0092 a0001c0001t0005g0093 a0001c0001t0005g0106 |
3 | 366 | 0.0082 | 22 | c.-4- others(37): Show |
LCLAT1 | ENSG00000172954.14 | transcript | ENST00000379509.8 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
LCMT1_chr16_25106742_25183228 | 25135284 | A | AAAATATA others(15): Show |
intron_variant | MODIFIER | NA19240.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0024 | 1 | 348 | 0.0029 | 22 | c.327 others(39): Show |
LCMT1 | ENSG00000205629.12 | transcript | ENST00000399069.8 | protein_coding | 3/10 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
LCMT2_chr15_43318649_43335573 | 43334633 | T | TTATATAT others(15): Show |
upstream_gene_variant | MODIFIER | HG00558.hp1 HG00642.hp2 HG01106.hp1 others(31): Show |
a0001a0004 | a0001c0001a0001c0002a0001c0004others(1): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(13): Show | a0001c0001t0002g0000 a0001c0001t0003g0000 a0001c0001t0004g0000 others(13): Show |
34 | 410 | 0.0829 | 22 | c.-41 others(33): Show |
LCMT2 | ENSG00000168806.8 | transcript | ENST00000305641.7 | protein_coding | 4061 | chr15 | TogoVar | |||||||
LCOR_chr10_96827298_97000956 | 96989695 | A | ATATATAT others(15): Show |
3_prime_UTR_variant | MODIFIER | NA20300.hp2 | a0008 | a0008c0013 | a0008c0013t0141 | a0008c0013t0141g0175 | 1 | 288 | 0.0035 | 22 | c.*45 others(33): Show |
LCOR | ENSG00000196233.14 | transcript | ENST00000421806.4 | protein_coding | 8/8 | 4563 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
LCP2_chr5_170241233_170302777 | 170289647 | T | TTCTTTCT others(15): Show |
intron_variant | MODIFIER | HG02559.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0300 | 1 | 384 | 0.0026 | 22 | c.142 others(39): Show |
LCP2 | ENSG00000043462.13 | transcript | ENST00000046794.10 | protein_coding | 2/20 | chr5 | TogoVar | |||||||
LCTL_chr15_66542532_66570998 | 66544724 | T | TTGTGTGT others(15): Show |
downstream_gene_variant | MODIFIER | HG04184.hp2 HG04199.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0006 | a0001c0001t0001g0193 a0001c0001t0006g0245 |
2 | 434 | 0.0046 | 22 | c.*37 others(33): Show |
LCTL | ENSG00000188501.12 | transcript | ENST00000695545.1 | protein_coding | 2807 | chr15 | TogoVar | |||||||
LCTL_chr15_66542532_66570998 | 66544724 | T | TTTTTTTT others(15): Show |
downstream_gene_variant | MODIFIER | HG01361.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0212 | 1 | 434 | 0.0023 | 22 | c.*37 others(33): Show |
LCTL | ENSG00000188501.12 | transcript | ENST00000695545.1 | protein_coding | 2807 | chr15 | TogoVar | |||||||
LCTL_chr15_66542532_66570998 | 66544724 | T | TTTTTTTT others(15): Show |
downstream_gene_variant | MODIFIER | HG00733.hp1 HG01257.hp2 HG01346.hp2 others(12): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0004 | a0001c0001t0001a0002c0002t0001a0003c0004t0001 | a0001c0001t0001g0082 a0002c0002t0001g0008 a0002c0002t0001g0092 others(5): Show |
15 | 434 | 0.0346 | 22 | c.*37 others(33): Show |
LCTL | ENSG00000188501.12 | transcript | ENST00000695545.1 | protein_coding | 2807 | chr15 | TogoVar | |||||||
LCTL_chr15_66542532_66570998 | 66544724 | T | TTTTTTTT others(15): Show |
downstream_gene_variant | MODIFIER | HG01943.hp2 NA18971.hp1 NA18975.hp1 others(2): Show |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0008 a0002c0002t0001g0200 a0002c0002t0001g0204 others(2): Show |
5 | 434 | 0.0115 | 22 | c.*37 others(33): Show |
LCTL | ENSG00000188501.12 | transcript | ENST00000695545.1 | protein_coding | 2807 | chr15 | TogoVar | |||||||
LCT_chr2_135782850_135842184 | 135835976 | G | GTATATAA others(15): Show |
intron_variant | MODIFIER | HG03098.hp1 | a0003 | a0003c0007 | a0003c0007t0001 | a0003c0007t0001g0104 | 1 | 366 | 0.0027 | 22 | c.640 others(37): Show |
LCT | ENSG00000115850.10 | transcript | ENST00000264162.7 | protein_coding | 1/16 | chr2 | TogoVar | |||||||
LDAF1_chr16_21153674_21185616 | 21168912 | T | TTATTTAT others(15): Show |
intron_variant | MODIFIER | HG01934.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0175 | 1 | 390 | 0.0026 | 22 | c.97- others(37): Show |
LDAF1 | ENSG00000011638.11 | transcript | ENST00000233047.9 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
LDAH_chr2_20679031_20828101 | 20716720 | G | GTATATAT others(15): Show |
intron_variant | MODIFIER | HG01358.hp2 HG02071.hp2 HG02165.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003a0001c0001t0005 | a0001c0001t0002g0112 a0001c0001t0003g0104 a0001c0001t0003g0200 others(2): Show |
5 | 258 | 0.0194 | 22 | c.704 others(41): Show |
LDAH | ENSG00000118961.15 | transcript | ENST00000237822.8 | protein_coding | 5/6 | chr2 | TogoVar | |||||||
LDB2_chr4_16496541_16903645 | 16763439 | T | TACACACA others(15): Show |
intron_variant | MODIFIER | NA19240.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0053 | 1 | 162 | 0.0062 | 22 | c.133 others(39): Show |
LDB2 | ENSG00000169744.13 | transcript | ENST00000304523.10 | protein_coding | 1/7 | chr4 | TogoVar | |||||||
LDB2_chr4_16496541_16903645 | 16812582 | T | TTATATAT others(15): Show |
intron_variant | MODIFIER | NA20300.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0033 | 1 | 162 | 0.0062 | 22 | c.133 others(41): Show |
LDB2 | ENSG00000169744.13 | transcript | ENST00000304523.10 | protein_coding | 1/7 | chr4 | TogoVar | |||||||
LDHAL6A_chr11_18450856_18484601 | 18467898 | T | TATATATA others(15): Show |
intron_variant | MODIFIER | HG02717.hp2 HG03486.hp1 |
a0001 | a0001c0001 | a0001c0001t0040a0001c0001t0043 | a0001c0001t0040g0285 a0001c0001t0043g0310 |
2 | 420 | 0.0048 | 22 | c.418 others(39): Show |
LDHAL6A | ENSG00000166800.11 | transcript | ENST00000280706.3 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
LDHA_chr11_18389563_18413425 | 18401955 | C | CTCTCTTT others(15): Show |
intron_variant | MODIFIER | HG06807.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0158 | 1 | 390 | 0.0026 | 22 | c.419 others(37): Show |
LDHA | ENSG00000134333.15 | transcript | ENST00000422447.8 | protein_coding | 4/7 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
LDHC_chr11_18407318_18457063 | 18444604 | G | GTATATAT others(15): Show |
intron_variant | MODIFIER | NA18964.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0072 | 1 | 348 | 0.0029 | 22 | c.711 others(39): Show |
LDHC | ENSG00000166796.12 | transcript | ENST00000541669.6 | protein_coding | 6/7 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
LDLRAD3_chr11_35939062_36237136 | 36075303 | G | GCCTTTTT others(15): Show |
intron_variant | MODIFIER | HG00099.hp1 HG00558.hp1 HG00597.hp1 others(143): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0002a0002c0003others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(29): Show | a0001c0001t0001g0005 a0001c0001t0001g0020 a0001c0001t0001g0022 others(143): Show |
146 | 236 | 0.6186 | 22 | c.194 others(39): Show |
LDLRAD3 | ENSG00000179241.13 | transcript | ENST00000315571.6 | protein_coding | 2/5 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
LDLRAD3_chr11_35939062_36237136 | 36140992 | T | TTCTCTCT others(15): Show |
intron_variant | MODIFIER | HG01515.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0114 | 1 | 236 | 0.0042 | 22 | c.454 others(41): Show |
LDLRAD3 | ENSG00000179241.13 | transcript | ENST00000315571.6 | protein_coding | 4/5 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
LDLRAD4_chr18_13213760_13657751 | 13578827 | C | CTTTTTTT others(15): Show |
intron_variant | MODIFIER | HG00099.hp2 HG02280.hp1 NA18964.hp1 |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0065 | a0001c0001t0003g0137 a0001c0001t0003g0147 a0001c0001t0065g0113 |
3 | 178 | 0.0169 | 22 | c.182 others(41): Show |
LDLRAD4 | ENSG00000168675.19 | transcript | ENST00000359446.11 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | ||||||
LDLRAD4_chr18_13213760_13657751 | 13610305 | T | TTTTTTTT others(15): Show |
intron_variant | MODIFIER | HG02922.hp1 | a0001 | a0001c0001 | a0001c0001t0010 | a0001c0001t0010g0055 | 1 | 178 | 0.0056 | 22 | c.182 others(41): Show |
LDLRAD4 | ENSG00000168675.19 | transcript | ENST00000359446.11 | protein_coding | 4/6 | chr18 | TogoVar | |||||||
LEF1_chr4_108042548_108173932 | 108086829 | T | TACACACA others(15): Show |
intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00280.hp1 others(33): Show |
a0001a0005 | a0001c0001a0001c0007a0005c0009 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(4): Show | a0001c0001t0001g0187 a0001c0001t0001g0201 a0001c0001t0002g0010 others(33): Show |
36 | 264 | 0.1364 | 22 | c.547 others(39): Show |
LEF1 | ENSG00000138795.10 | transcript | ENST00000265165.6 | protein_coding | 4/11 | chr4 | TogoVar | |||||||
LEF1_chr4_108042548_108173932 | 108115846 | T | TACACACA others(15): Show |
intron_variant | MODIFIER | HG01255.hp1 HG02004.hp2 HG02895.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0021 | a0001c0001t0001g0243 a0001c0001t0003g0241 a0001c0001t0003g0242 others(2): Show |
5 | 264 | 0.0189 | 22 | c.415 others(41): Show |
LEF1 | ENSG00000138795.10 | transcript | ENST00000265165.6 | protein_coding | 3/11 | chr4 | TogoVar | |||||||
LEF1_chr4_108042548_108173932 | 108149458 | C | CAAAAAAA others(15): Show |
intron_variant | MODIFIER | HG00642.hp2 HG01243.hp2 HG02895.hp2 others(6): Show |
a0001a0003a0004 | a0001c0001a0003c0004a0004c0005 | a0001c0001t0003a0001c0001t0006a0001c0001t0022others(3): Show | a0001c0001t0003g0238 a0001c0001t0003g0239 a0001c0001t0003g0241 others(6): Show |
9 | 264 | 0.0341 | 22 | c.414 others(41): Show |
LEF1 | ENSG00000138795.10 | transcript | ENST00000265165.6 | protein_coding | 3/11 | chr4 | TogoVar | |||||||
LEMD3_chr12_65164583_65253355 | 65212046 | A | ACTCACAG others(15): Show |
intron_variant | MODIFIER | HG02809.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0215 | 1 | 398 | 0.0025 | 22 | c.156 others(41): Show |
LEMD3 | ENSG00000174106.3 | transcript | ENST00000308330.3 | protein_coding | 2/12 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
LEO1_chr15_51933025_51976778 | 51934711 | C | CAAAAAAA others(15): Show |
downstream_gene_variant | MODIFIER | HG01928.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0012 | 1 | 388 | 0.0026 | 22 | c.*34 others(33): Show |
LEO1 | ENSG00000166477.13 | transcript | ENST00000299601.10 | protein_coding | 3313 | chr15 | TogoVar | |||||||
LEPROT_chr1_65415668_65441007 | 65417064 | C | CTATATAT others(15): Show |
upstream_gene_variant | MODIFIER | HG01884.hp1 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0039 | 1 | 402 | 0.0025 | 22 | c.-36 others(33): Show |
LEPROT | ENSG00000213625.9 | transcript | ENST00000371065.9 | protein_coding | 3603 | chr1 | TogoVar | |||||||
LEPROT_chr1_65415668_65441007 | 65417065 | C | CATATATA others(15): Show |
upstream_gene_variant | MODIFIER | HG01168.hp1 HG01433.hp2 HG02451.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0035a0001c0001t0037 | a0001c0001t0004g0019 a0001c0001t0004g0034 a0001c0001t0004g0039 others(4): Show |
7 | 402 | 0.0174 | 22 | c.-36 others(33): Show |
LEPROT | ENSG00000213625.9 | transcript | ENST00000371065.9 | protein_coding | 3602 | chr1 | TogoVar | |||||||
LEPR_chr1_65415668_65646559 | 65417065 | C | CATATATA others(15): Show |
upstream_gene_variant | MODIFIER | HG01168.hp1 HG01433.hp2 HG02451.hp2 others(3): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0025a0003c0006others(1): Show | a0001c0001t0003a0001c0001t0011a0002c0025t0025others(2): Show | a0001c0001t0003g0061 a0001c0001t0003g0074 a0001c0001t0011g0013 others(3): Show |
6 | 216 | 0.0278 | 22 | c.-37 others(33): Show |
LEPR | ENSG00000116678.20 | transcript | ENST00000349533.11 | protein_coding | 3602 | chr1 | TogoVar | |||||||
LEPR_chr1_65415668_65646559 | 65472411 | A | AACACACA others(15): Show |
intron_variant | MODIFIER | HG02809.hp2 HG02922.hp2 |
a0005 | a0005c0007 | a0005c0007t0003 | a0005c0007t0003g0092 a0005c0007t0003g0101 |
2 | 216 | 0.0093 | 22 | c.-21 others(41): Show |
LEPR | ENSG00000116678.20 | transcript | ENST00000349533.11 | protein_coding | 2/19 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
LEPR_chr1_65415668_65646559 | 65488114 | T | TTTCCCTC others(15): Show |
intron_variant | MODIFIER | HG03225.hp1 | a0002 | a0002c0002 | a0002c0002t0005 | a0002c0002t0005g0151 | 1 | 216 | 0.0046 | 22 | c.-21 others(41): Show |
LEPR | ENSG00000116678.20 | transcript | ENST00000349533.11 | protein_coding | 2/19 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
LEPR_chr1_65415668_65646559 | 65488214 | C | CTTTCTTT others(15): Show |
intron_variant | MODIFIER | HG00280.hp1 | a0003 | a0003c0005 | a0003c0005t0007 | a0003c0005t0007g0194 | 1 | 216 | 0.0046 | 22 | c.-21 others(41): Show |
LEPR | ENSG00000116678.20 | transcript | ENST00000349533.11 | protein_coding | 2/19 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
LEPR_chr1_65415668_65646559 | 65488222 | C | CTTTCTTT others(15): Show |
intron_variant | MODIFIER | HG01361.hp1 | a0004 | a0004c0003 | a0004c0003t0014 | a0004c0003t0014g0086 | 1 | 216 | 0.0046 | 22 | c.-21 others(41): Show |
LEPR | ENSG00000116678.20 | transcript | ENST00000349533.11 | protein_coding | 2/19 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
LEPR_chr1_65415668_65646559 | 65488226 | C | CTTTCTTT others(15): Show |
intron_variant | MODIFIER | HG00642.hp1 HG01496.hp1 |
a0002a0004 | a0002c0002a0004c0003 | a0002c0002t0001a0004c0003t0004 | a0002c0002t0001g0070 a0004c0003t0004g0179 |
2 | 216 | 0.0093 | 22 | c.-21 others(41): Show |
LEPR | ENSG00000116678.20 | transcript | ENST00000349533.11 | protein_coding | 2/19 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
LEPR_chr1_65415668_65646559 | 65518873 | T | TTCTTTCT others(15): Show |
intron_variant | MODIFIER | NA19081.hp2 | a0003 | a0003c0005 | a0003c0005t0032 | a0003c0005t0032g0007 | 1 | 216 | 0.0046 | 22 | c.-20 others(41): Show |
LEPR | ENSG00000116678.20 | transcript | ENST00000349533.11 | protein_coding | 2/19 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
LETM1_chr4_1806479_1861156 | 1860697 | A | ATATATAT others(15): Show |
upstream_gene_variant | MODIFIER | HG01975.hp1 HG03540.hp2 |
a0005 | a0005c0005 | a0005c0005t0004a0005c0005t0018 | a0005c0005t0004g0003 a0005c0005t0018g0019 |
2 | 200 | 0.0100 | 22 | c.-47 others(33): Show |
LETM1 | ENSG00000168924.15 | transcript | ENST00000302787.3 | protein_coding | 4542 | chr4 | TogoVar | |||||||
LFNG_chr7_2514774_2533429 | 2527618 | G | GGGGTACC others(15): Show |
3_prime_UTR_variant | MODIFIER | HG02055.hp1 | a0001 | a0001c0001 | a0001c0001t0016 | a0001c0001t0016g0001 | 1 | 414 | 0.0024 | 22 | c.*40 others(31): Show |
LFNG | ENSG00000106003.14 | transcript | ENST00000222725.10 | protein_coding | 8/8 | 429 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
LGALS16_chr19_39650913_39665647 | 39663851 | T | TATATATA others(15): Show |
downstream_gene_variant | MODIFIER | HG03195.hp2 HG03225.hp2 |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0008 | 2 | 442 | 0.0045 | 22 | c.*33 others(33): Show |
LGALS16 | ENSG00000249861.4 | transcript | ENST00000392051.4 | protein_coding | 3205 | chr19 | TogoVar | |||||||
LGALS8_chr1_236518982_236557981 | 236533917 | T | TAGCTCCC others(15): Show |
intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00280.hp2 others(171): Show |
a0001a0003 | a0001c0001a0001c0004a0001c0007others(4): Show | a0001c0001t0001a0001c0001t0007a0001c0001t0010others(17): Show | a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0007 others(126): Show |
174 | 450 | 0.3867 | 22 | c.46- others(37): Show |
LGALS8 | ENSG00000116977.19 | transcript | ENST00000366584.9 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
LGALS8_chr1_236518982_236557981 | 236536981 | G | GCAGCTAT others(15): Show |
intron_variant | MODIFIER | HG01515.hp1 HG02055.hp2 |
a0003 | a0003c0003 | a0003c0003t0024a0003c0003t0044 | a0003c0003t0024g0122 a0003c0003t0044g0279 |
2 | 450 | 0.0044 | 22 | c.46- others(35): Show |
LGALS8 | ENSG00000116977.19 | transcript | ENST00000366584.9 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
LGALS9B_chr17_20444395_20472539 | 20455425 | T | TGAGGAGA others(15): Show |
intron_variant | MODIFIER | HG02055.hp2 HG02976.hp2 HG03139.hp2 others(1): Show |
a0002 | a0002c0011 | a0002c0011t0001 | a0002c0011t0001g0033 a0002c0011t0001g0034 |
4 | 433 | 0.0092 | 22 | c.445 others(35): Show |
LGALS9B | ENSG00000170298.16 | transcript | ENST00000423676.8 | protein_coding | 4/10 | chr17 | TogoVar | |||||||
LGR4_chr11_27360961_27477790 | 27474121 | C | CAAAAAAA others(15): Show |
upstream_gene_variant | MODIFIER | NA18994.hp1 | a0001 | a0001c0002 | a0001c0002t0020 | a0001c0002t0020g0004 | 1 | 244 | 0.0041 | 22 | c.-18 others(33): Show |
LGR4 | ENSG00000205213.14 | transcript | ENST00000379214.9 | protein_coding | 1332 | chr11 | TogoVar | |||||||
LGR5_chr12_71434798_71591310 | 71448084 | A | AACACACA others(15): Show |
intron_variant | MODIFIER | HG01243.hp1 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0007 | 1 | 200 | 0.0050 | 22 | c.212 others(39): Show |
LGR5 | ENSG00000139292.13 | transcript | ENST00000266674.10 | protein_coding | 1/17 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
LGR5_chr12_71434798_71591310 | 71548301 | C | CTGTGTGT others(15): Show |
intron_variant | MODIFIER | HG00280.hp2 HG01346.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0128 a0001c0002t0001g0016 |
2 | 200 | 0.0100 | 22 | c.429 others(39): Show |
LGR5 | ENSG00000139292.13 | transcript | ENST00000266674.10 | protein_coding | 4/17 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
LGR5_chr12_71434798_71591310 | 71565422 | C | CTATATAT others(15): Show |
intron_variant | MODIFIER | HG02486.hp1 HG02970.hp2 HG03139.hp1 |
a0004a0009 | a0004c0005a0009c0017 | a0004c0005t0011a0004c0005t0019a0009c0017t0018 | a0004c0005t0011g0199 a0004c0005t0019g0181 a0009c0017t0018g0004 |
3 | 200 | 0.0150 | 22 | c.858 others(37): Show |
LGR5 | ENSG00000139292.13 | transcript | ENST00000266674.10 | protein_coding | 8/17 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
LHCGR_chr2_48681774_48760724 | 48752991 | G | GGGGGGGG others(15): Show |
intron_variant | MODIFIER | HG02523.hp1 HG03017.hp2 |
a0001a0003 | a0001c0001a0003c0004 | a0001c0001t0001a0003c0004t0001 | a0001c0001t0001g0299 a0003c0004t0001g0333 |
2 | 374 | 0.0054 | 22 | c.161 others(39): Show |
LHCGR | ENSG00000138039.15 | transcript | ENST00000294954.12 | protein_coding | 1/10 | chr2 | TogoVar | |||||||
LHFPL2_chr5_78480230_78653772 | 78651583 | C | CAAAAAAA others(15): Show |
upstream_gene_variant | MODIFIER | HG00280.hp2 HG03704.hp2 NA18962.hp2 others(2): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0004a0001c0002t0002a0001c0002t0003 | a0001c0001t0004g0047 a0001c0002t0002g0021 a0001c0002t0002g0077 others(2): Show |
5 | 254 | 0.0197 | 22 | c.-34 others(33): Show |
LHFPL2 | ENSG00000145685.14 | transcript | ENST00000380345.7 | protein_coding | 2812 | chr5 | TogoVar | |||||||
LHFPL3_chr7_104323603_104913561 | 104666512 | C | CTTTTTTT others(15): Show |
intron_variant | MODIFIER | HG00621.hp1 | a0001 | a0001c0001 | a0001c0001t0006 | a0001c0001t0006g0013 | 1 | 86 | 0.0116 | 22 | c.446 others(41): Show |
LHFPL3 | ENSG00000187416.13 | transcript | ENST00000424859.7 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
LHFPL4_chr3_9493361_9558822 | 9556116 | T | TCACACAC others(15): Show |
upstream_gene_variant | MODIFIER | HG02004.hp1 HG02071.hp2 NA18970.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0007 | a0001c0001t0003g0019 a0001c0001t0003g0021 a0001c0001t0003g0042 others(4): Show |
7 | 360 | 0.0194 | 22 | c.-26 others(33): Show |
LHFPL4 | ENSG00000156959.9 | transcript | ENST00000287585.8 | protein_coding | 2295 | chr3 | TogoVar | |||||||
LHFPL4_chr3_9493361_9558822 | 9556778 | G | GAGAGAGA others(15): Show |
upstream_gene_variant | MODIFIER | HG03453.hp2 | a0001 | a0001c0001 | a0001c0001t0024 | a0001c0001t0024g0144 | 1 | 360 | 0.0028 | 22 | c.-32 others(33): Show |
LHFPL4 | ENSG00000156959.9 | transcript | ENST00000287585.8 | protein_coding | 2957 | chr3 | TogoVar |