Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
ANAPC7_chr12_110367900_110408708	110394669	C C	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02055.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0252 a0001c0001t0001g0252	1	298	0.0034	22	c.408 others(37): Show c.408+410_408+431dupTTTTTTTTTTTTTTTTTTTTTT	ANAPC7	ENSG00000196510.14	transcript	ENST00000455511.9	protein_coding	3/10			chr12	TogoVar
ANGPT2_chr8_6494632_6568245	6505501	A A	ACATATAG others(15): Show ACATATAGAATATATATATTCTT	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG04228.hp2 HG01891.hp2 HG04228.hp2	a0001 a0001	a0001c0001 a0001c0012 a0001c0001 a0001c0012	a0001c0001t0001 a0001c0012t0060 a0001c0001t0001 a0001c0012t0060	a0001c0001t0001g0120 a0001c0012t0060g0324 a0001c0001t0001g0120 a0001c0012t0060g0324	2	336	0.0060	22	c.132 others(41): Show c.1328-2241_1328-2240insAAGAATATATATATTCTATATG	ANGPT2	ENSG00000091879.14	transcript	ENST00000629816.3	protein_coding	8/8			chr8	TogoVar
ANGPT2_chr8_6494632_6568245	6559230	A A	AACACACA others(15): Show AACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG00621.hp2 HG01167.hp2 others(2): Show HG00621.hp1 HG00621.hp2 HG01167.hp2 HG01169.hp1 HG02886.hp2	a0001 a0001	a0001c0003 a0001c0013 a0001c0003 a0001c0013	a0001c0003t0001 a0001c0003t0007 a0001c0013t0019 a0001c0003t0001 a0001c0003t0007 a0001c0013t0019	a0001c0003t0001g0081 a0001c0003t0007g0080 a0001c0013t0019g0329 others(2): Show a0001c0003t0001g0081 a0001c0003t0007g0080 a0001c0013t0019g0329 a0001c0013t0019g0330 a0001c0013t0019g0331	5	336	0.0149	22	c.288 others(39): Show c.288+3395_288+3416dupGTGTGTGTGTGTGTGTGTGTGT	ANGPT2	ENSG00000091879.14	transcript	ENST00000629816.3	protein_coding	1/8			chr8	TogoVar
ANGPTL1_chr1_178844535_178876077	178856194	G G	GATATATA others(15): Show GATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03669.hp1 HG03669.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0060 a0001c0001t0010g0060	1	424	0.0024	22	c.824 others(39): Show c.824-2408_824-2407insATATATATATATATATATATAT	ANGPTL1	ENSG00000116194.13	transcript	ENST00000234816.7	protein_coding	3/5			chr1	TogoVar
ANGPTL1_chr1_178844535_178876077	178856198	G G	GATATATA others(15): Show GATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0006 a0001c0003t0006	a0001c0003t0006g0071 a0001c0003t0006g0071	1	424	0.0024	22	c.824 others(39): Show c.824-2412_824-2411insATATATATATATATATATATAT	ANGPTL1	ENSG00000116194.13	transcript	ENST00000234816.7	protein_coding	3/5			chr1	TogoVar
ANGPTL1_chr1_178844535_178876077	178856202	G G	GAGATATA others(15): Show GAGATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0006 a0001c0003t0006	a0001c0003t0006g0067 a0001c0003t0006g0067	1	424	0.0024	22	c.824 others(39): Show c.824-2416_824-2415insATATATATATATATATATATCT	ANGPTL1	ENSG00000116194.13	transcript	ENST00000234816.7	protein_coding	3/5			chr1	TogoVar
ANGPTL1_chr1_178844535_178876077	178856234	T T	TATATATA others(15): Show TATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG03516.hp2 HG02922.hp1 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0035 a0001c0001t0003g0035	2	424	0.0047	22	c.824 others(39): Show c.824-2448_824-2447insGTGTATATATATATATATATAT	ANGPTL1	ENSG00000116194.13	transcript	ENST00000234816.7	protein_coding	3/5			chr1	TogoVar
ANGPTL1_chr1_178844535_178876077	178856394	A A	ATTTTTTT others(15): Show ATTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG03486.hp1 NA20129.hp2 HG02572.hp1 HG03486.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0258 a0001c0001t0005g0267 a0001c0001t0005g0289 a0001c0001t0005g0258 a0001c0001t0005g0267 a0001c0001t0005g0289	3	424	0.0071	22	c.824 others(39): Show c.824-2629_824-2608dupAAAAAAAAAAAAAAAAAAAAAA	ANGPTL1	ENSG00000116194.13	transcript	ENST00000234816.7	protein_coding	3/5			chr1	TogoVar
ANGPTL1_chr1_178844535_178876077	178856425	T T	TTTTTTTT others(15): Show TTTTTTTTTTTTTTTTTTTTTTC	intron_variant intron_variant	MODIFIER	NA18966.hp2 NA18966.hp2	a0002 a0002	a0002c0006 a0002c0006	a0002c0006t0001 a0002c0006t0001	a0002c0006t0001g0315 a0002c0006t0001g0315	1	424	0.0024	22	c.824 others(39): Show c.824-2639_824-2638insGAAAAAAAAAAAAAAAAAAAAA	ANGPTL1	ENSG00000116194.13	transcript	ENST00000234816.7	protein_coding	3/5			chr1	TogoVar
ANGPTL5_chr11_101885674_101921522	101889124	T T	TAAGAAAG others(15): Show TAAGAAAGAAAGAAAGAAAGAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02257.hp1 HG03490.hp2 HG03492.hp2 HG02257.hp1 HG03490.hp2 HG03492.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0043 a0002c0002t0001g0186 a0002c0002t0001g0043 a0002c0002t0001g0186	3	422	0.0071	22	c.21 others(33): Show c.2154_*2155insTTTCTTTCTTTCTTTCTTTCTT	ANGPTL5	ENSG00000187151.7	transcript	ENST00000334289.7	protein_coding		1549		chr11	TogoVar
ANK1_chr8_41648225_41802622	41703450	A A	ATATATAT others(15): Show ATATATATTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0002 a0002	a0002c0007 a0002c0007	a0002c0007t0007 a0002c0007t0007	a0002c0007t0007g0028 a0002c0007t0007g0028	1	278	0.0036	22	c.229 others(39): Show c.2295+590_2295+591insAAAAAAAAAAAAAAAATATATA	ANK1	ENSG00000029534.22	transcript	ENST00000289734.13	protein_coding	20/42			chr8	TogoVar
ANK2_chr4_113044653_113388736	113149874	C C	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02040.hp1 HG02040.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0139 a0001c0001t0001g0139	1	178	0.0056	22	c.85- others(39): Show c.85-24537_85-24516dupAAAAAAAAAAAAAAAAAAAAAA	ANK2	ENSG00000145362.21	transcript	ENST00000357077.9	protein_coding	1/45		INFO_REALIGN_3_PRIME	chr4	TogoVar
ANK3_chr10_60021298_60394875	60100234	G G	GTTTTTTT others(15): Show GTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG03225.hp2 HG02258.hp1 HG03225.hp2	a0001 a0003 a0001 a0003	a0001c0043 a0003c0009 a0001c0043 a0003c0009	a0001c0043t0015 a0003c0009t0004 a0001c0043t0015 a0003c0009t0004	a0001c0043t0015g0187 a0003c0009t0004g0186 a0001c0043t0015g0187 a0003c0009t0004g0186	2	192	0.0104	22	c.332 others(41): Show c.3328+5649_3328+5670dupAAAAAAAAAAAAAAAAAAAAAA	ANK3	ENSG00000151150.22	transcript	ENST00000280772.7	protein_coding	28/43			chr10	TogoVar
ANK3_chr10_60021298_60394875	60104404	A A	AAGAAAAG others(15): Show AAGAAAAGAAAAGAAAAGAAAAG	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0013 a0013	a0013c0092 a0013c0092	a0013c0092t0006 a0013c0092t0006	a0013c0092t0006g0004 a0013c0092t0006g0004	1	192	0.0052	22	c.332 others(41): Show c.3328+1500_3328+1501insCTTTTCTTTTCTTTTCTTTTCT	ANK3	ENSG00000151150.22	transcript	ENST00000280772.7	protein_coding	28/43			chr10	TogoVar
ANK3_chr10_60021298_60394875	60288889	A A	AACACACA others(15): Show AACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0001 a0001	a0001c0056 a0001c0056	a0001c0056t0005 a0001c0056t0005	a0001c0056t0005g0039 a0001c0056t0005g0039	1	192	0.0052	22	c.115 others(39): Show c.115-9272_115-9251dupGTGTGTGTGTGTGTGTGTGTGT	ANK3	ENSG00000151150.22	transcript	ENST00000280772.7	protein_coding	1/43			chr10	TogoVar
ANK3_chr10_60021298_60394875	60306428	C C	CATATATA others(15): Show CATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0004 a0004	a0004c0044 a0004c0044	a0004c0044t0001 a0004c0044t0001	a0004c0044t0001g0083 a0004c0044t0001g0083	1	192	0.0052	22	c.115 others(41): Show c.115-26811_115-26790dupATATATATATATATATATATAT	ANK3	ENSG00000151150.22	transcript	ENST00000280772.7	protein_coding	1/43			chr10	TogoVar
ANKAR_chr2_189669670_189751647	189729695	C C	CGTGCGTG others(15): Show CGTGCGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02886.hp1 HG02630.hp1 HG02886.hp1	a0003 a0003	a0003c0010 a0003c0010	a0003c0010t0001 a0003c0010t0001	a0003c0010t0001g0280 a0003c0010t0001g0281 a0003c0010t0001g0280 a0003c0010t0001g0281	2	296	0.0068	22	c.319 others(39): Show c.3194-797_3194-796insCGTGTGTGTGTGTGTGTGTGTG	ANKAR	ENSG00000151687.15	transcript	ENST00000684021.1	protein_coding	15/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
ANKAR_chr2_189669670_189751647	189729695	C C	CGTGTGTG others(15): Show CGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02135.hp1 HG02257.hp1 HG02486.hp1 others(10): Show HG02135.hp1 HG02257.hp1 HG02486.hp1 HG02970.hp1 HG02976.hp2 HG03453.hp1 HG03490.hp1 HG03831.hp1 HG03834.hp1 NA18939.hp2 NA19000.hp1 NA19030.hp1 NA19080.hp1	a0003 a0004 a0003 a0004	a0003c0003 a0004c0006 a0004c0009 a0003c0003 a0004c0006 a0004c0009	a0003c0003t0001 a0004c0006t0001 a0004c0009t0001 a0003c0003t0001 a0004c0006t0001 a0004c0009t0001	a0003c0003t0001g0279 a0003c0003t0001g0282 a0003c0003t0001g0283 others(10): Show a0003c0003t0001g0279 a0003c0003t0001g0282 a0003c0003t0001g0283 a0003c0003t0001g0290 a0003c0003t0001g0291 a0003c0003t0001g0293 a0003c0003t0001g0294 a0003c0003t0001g0295 a0004c0006t0001g0285 a0004c0006t0001g0286 a0004c0009t0001g0284 a0004c0009t0001g0287 a0004c0009t0001g0288	13	296	0.0439	22	c.319 others(39): Show c.3194-779_3194-778insTGTGTGTGTGTGTGTGTGTGTG	ANKAR	ENSG00000151687.15	transcript	ENST00000684021.1	protein_coding	15/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
ANKAR_chr2_189669670_189751647	189729715	T T	TGTGTGTG others(15): Show TGTGTGTGTGTGTGTGTGTGTGG	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG02145.hp1 HG02258.hp1 others(6): Show HG01496.hp2 HG02145.hp1 HG02258.hp1 HG02723.hp2 HG02896.hp1 HG02897.hp2 HG03098.hp1 HG03130.hp2 NA19240.hp2	a0001 a0007 a0012 a0001 a0007 a0012	a0001c0001 a0007c0011 a0012c0013 a0001c0001 a0007c0011 a0012c0013	a0001c0001t0001 a0007c0011t0001 a0012c0013t0001 a0001c0001t0001 a0007c0011t0001 a0012c0013t0001	a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 others(6): Show a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0156 a0001c0001t0001g0170 a0001c0001t0001g0183 a0007c0011t0001g0161 a0007c0011t0001g0162 a0012c0013t0001g0157	9	296	0.0304	22	c.319 others(39): Show c.3194-779_3194-778insTGTGTGTGTGTGTGTGTGTGGG	ANKAR	ENSG00000151687.15	transcript	ENST00000684021.1	protein_coding	15/22		INFO_REALIGN_3_PRIME	chr2	TogoVar
ANKDD1A_chr15_64906902_64963691	64945607	C C	CATATATA others(15): Show CATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00597.hp2 HG00609.hp2 others(48): Show HG00558.hp1 HG00597.hp2 HG00609.hp2 HG00642.hp1 HG00673.hp2 HG00733.hp1 HG00735.hp2 HG01069.hp2 HG01167.hp1 HG01192.hp2 HG01496.hp1 HG01516.hp1 HG01978.hp1 HG01993.hp2 HG02027.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02129.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02630.hp2 HG02809.hp1 HG03041.hp1 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03486.hp2 HG03490.hp1 HG03516.hp1 NA18948.hp1 NA18951.hp2 NA18953.hp2 NA18955.hp1 NA18955.hp2 NA18975.hp1 NA18975.hp2 NA18990.hp2 NA18992.hp2 NA19002.hp1 NA19009.hp1 NA19030.hp1 NA19030.hp2 NA19065.hp2 NA19084.hp1 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19240.hp2	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0001c0002 a0001c0004 others(3): Show a0001c0001 a0001c0002 a0001c0004 a0001c0013 a0003c0008 a0004c0007	a0001c0001t0001 a0001c0001t0010 a0001c0002t0001 others(5): Show a0001c0001t0001 a0001c0001t0010 a0001c0002t0001 a0001c0002t0002 a0001c0004t0003 a0001c0013t0001 a0003c0008t0001 a0004c0007t0003	a0001c0001t0001g0015 a0001c0001t0001g0025 a0001c0001t0001g0044 others(45): Show a0001c0001t0001g0015 a0001c0001t0001g0025 a0001c0001t0001g0044 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0069 a0001c0001t0001g0082 a0001c0001t0001g0087 a0001c0001t0001g0090 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0113 a0001c0001t0001g0123 a0001c0001t0001g0134 a0001c0001t0001g0139 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0194 a0001c0001t0001g0207 a0001c0001t0001g0242 a0001c0001t0001g0243 a0001c0001t0001g0248 a0001c0001t0001g0281 a0001c0001t0001g0305 a0001c0001t0001g0308 a0001c0001t0010g0197 a0001c0002t0001g0020 a0001c0002t0001g0059 a0001c0002t0001g0061 a0001c0002t0001g0068 a0001c0002t0001g0132 a0001c0002t0001g0247 a0001c0002t0001g0276 a0001c0002t0002g0150 a0001c0002t0002g0151 a0001c0002t0002g0173 a0001c0002t0002g0260 a0001c0002t0002g0316 a0001c0002t0002g0322 a0001c0002t0002g0324 a0001c0004t0003g0001 a0001c0004t0003g0036 a0001c0004t0003g0039 a0001c0013t0001g0226 a0003c0008t0001g0064 a0004c0007t0003g0262	51	338	0.1509	22	c.116 others(39): Show c.1161+863_1161+884dupATATATATATATATATATATAT	ANKDD1A	ENSG00000166839.18	transcript	ENST00000319580.13	protein_coding	12/14		INFO_REALIGN_3_PRIME	chr15	TogoVar
ANKDD1A_chr15_64906902_64963691	64945607	C C	CTTATATA others(15): Show CTTATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01891.hp1 HG02486.hp2 others(3): Show HG01884.hp2 HG01891.hp1 HG02486.hp2 HG02723.hp2 HG03471.hp1 NA19043.hp1	a0001 a0010 a0001 a0010	a0001c0002 a0010c0014 a0001c0002 a0010c0014	a0001c0002t0004 a0010c0014t0002 a0001c0002t0004 a0010c0014t0002	a0001c0002t0004g0191 a0001c0002t0004g0192 a0001c0002t0004g0251 others(3): Show a0001c0002t0004g0191 a0001c0002t0004g0192 a0001c0002t0004g0251 a0001c0002t0004g0317 a0001c0002t0004g0319 a0010c0014t0002g0266	6	338	0.0178	22	c.116 others(39): Show c.1161+860_1161+861insTTATATATATATATATATATAT	ANKDD1A	ENSG00000166839.18	transcript	ENST00000319580.13	protein_coding	12/14			chr15	TogoVar
ANKDD1A_chr15_64906902_64963691	64953615	C C	CTTCTTCT others(15): Show CTTCTTCTTCTCCTTCTTCTTAG	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0003 a0001c0004t0003	a0001c0004t0003g0250 a0001c0004t0003g0250	1	338	0.0030	22	c.148 others(41): Show c.1484-3478_1484-3477insCCTTCTTCTTAGTTCTTCTTCT	ANKDD1A	ENSG00000166839.18	transcript	ENST00000319580.13	protein_coding	14/14		INFO_REALIGN_3_PRIME	chr15	TogoVar
ANKFN1_chr17_56148475_56522016	56170805	T T	TACACACA others(15): Show TACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG03017.hp2 HG03831.hp2 HG01496.hp2 HG03017.hp2 HG03831.hp2	a0002 a0003 a0002 a0003	a0002c0002 a0003c0006 a0002c0002 a0003c0006	a0002c0002t0001 a0003c0006t0018 a0002c0002t0001 a0003c0006t0018	a0002c0002t0001g0016 a0002c0002t0001g0028 a0003c0006t0018g0020 a0002c0002t0001g0016 a0002c0002t0001g0028 a0003c0006t0018g0020	3	112	0.0268	22	c.-71 others(41): Show c.-71+17276_-71+17277insCACACACACACACACACACACA	ANKFN1	ENSG00000153930.13	transcript	ENST00000682825.1	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr17	TogoVar
ANKFN1_chr17_56148475_56522016	56170807	T T	TACACACA others(15): Show TACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01934.hp2 HG01934.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0008 a0002c0002t0008	a0002c0002t0008g0019 a0002c0002t0008g0019	1	112	0.0089	22	c.-71 others(41): Show c.-71+17283_-71+17304dupCACACACACACACACACACACA	ANKFN1	ENSG00000153930.13	transcript	ENST00000682825.1	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr17	TogoVar
ANKFN1_chr17_56148475_56522016	56170807	T T	TATATACA others(15): Show TATATACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0005 a0005	a0005c0013 a0005c0013	a0005c0013t0004 a0005c0013t0004	a0005c0013t0004g0033 a0005c0013t0004g0033	1	112	0.0089	22	c.-71 others(41): Show c.-71+17278_-71+17279insTATACACACACACACACACACA	ANKFN1	ENSG00000153930.13	transcript	ENST00000682825.1	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr17	TogoVar
ANKFN1_chr17_56148475_56522016	56170807	T T	TATATATA others(15): Show TATATATATATATACACACACAC	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG02897.hp1 NA18906.hp1 HG02896.hp1 HG02897.hp1 NA18906.hp1	a0002 a0003 a0002 a0003	a0002c0012 a0003c0003 a0002c0012 a0003c0003	a0002c0012t0005 a0003c0003t0003 a0002c0012t0005 a0003c0003t0003	a0002c0012t0005g0081 a0002c0012t0005g0082 a0003c0003t0003g0089 a0002c0012t0005g0081 a0002c0012t0005g0082 a0003c0003t0003g0089	3	112	0.0268	22	c.-71 others(41): Show c.-71+17278_-71+17279insTATATATATATACACACACACA	ANKFN1	ENSG00000153930.13	transcript	ENST00000682825.1	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr17	TogoVar
ANKFN1_chr17_56148475_56522016	56189170	C C	CTTTTTTT others(15): Show CTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02886.hp2 NA18522.hp1 HG02886.hp2 NA18522.hp1	a0002 a0003 a0002 a0003	a0002c0002 a0003c0003 a0002c0002 a0003c0003	a0002c0002t0010 a0003c0003t0003 a0002c0002t0010 a0003c0003t0003	a0002c0002t0010g0034 a0003c0003t0003g0036 a0002c0002t0010g0034 a0003c0003t0003g0036	2	112	0.0179	22	c.-70 others(41): Show c.-70-23410_-70-23409insTTTTTTTTTTTTTTTTTTTTTT	ANKFN1	ENSG00000153930.13	transcript	ENST00000682825.1	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr17	TogoVar
ANKHD1_chr5_140396833_140544849	140458957	T T	TATATATA others(15): Show TATATATATATATATATATATGC	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0241 a0001c0001t0001g0241	1	322	0.0031	22	c.148 others(39): Show c.1480+115_1480+116insGCATATATATATATATATATAT	ANKHD1	ENSG00000131503.21	transcript	ENST00000360839.7	protein_coding	8/33		INFO_REALIGN_3_PRIME	chr5	TogoVar
ANKHD1_chr5_140396833_140544849	140485397	A A	AACACACA others(15): Show AACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0163 a0001c0001t0001g0163	1	322	0.0031	22	c.199 others(39): Show c.1998+158_1999-162dupACACACACACACACACACACAC	ANKHD1	ENSG00000131503.21	transcript	ENST00000360839.7	protein_coding	12/33		INFO_REALIGN_3_PRIME	chr5	TogoVar
ANKIB1_chr7_92240974_92406383	92309942	A A	AAAAAAAA others(15): Show AAAAAAAAAAAAAATATATATAT	intron_variant intron_variant	MODIFIER	NA18975.hp1 NA18975.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0246 a0001c0003t0002g0246	1	314	0.0032	22	c.486 others(39): Show c.486+2287_486+2288insAAAAAAAAAAAATATATATATA	ANKIB1	ENSG00000001629.10	transcript	ENST00000265742.8	protein_coding	3/19		INFO_REALIGN_3_PRIME	chr7	TogoVar
ANKIB1_chr7_92240974_92406383	92309942	A A	AAAAAAAA others(15): Show AAAAAAAAAAAATATATATATAT	intron_variant intron_variant	MODIFIER	NA18971.hp2 NA18971.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0253 a0001c0003t0002g0253	1	314	0.0032	22	c.486 others(39): Show c.486+2287_486+2288insAAAAAAAAAATATATATATATA	ANKIB1	ENSG00000001629.10	transcript	ENST00000265742.8	protein_coding	3/19		INFO_REALIGN_3_PRIME	chr7	TogoVar
ANKIB1_chr7_92240974_92406383	92309942	A A	AAAAAAAA others(15): Show AAAAAAAAAATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18939.hp2 NA18939.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0254 a0001c0003t0002g0254	1	314	0.0032	22	c.486 others(39): Show c.486+2287_486+2288insAAAAAAAATATATATATATATA	ANKIB1	ENSG00000001629.10	transcript	ENST00000265742.8	protein_coding	3/19		INFO_REALIGN_3_PRIME	chr7	TogoVar
ANKLE2_chr12_132720503_132766832	132746348	C C	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01243.hp1	a0004 a0004	a0004c0006 a0004c0006	a0004c0006t0001 a0004c0006t0001	a0004c0006t0001g0176 a0004c0006t0001g0176	1	350	0.0029	22	c.123 others(41): Show c.1230+1483_1230+1484insTTTTTTTTTTTTTTTTTTTTTT	ANKLE2	ENSG00000176915.15	transcript	ENST00000357997.10	protein_coding	5/12			chr12	TogoVar
ANKRD10_chr13_110873540_110920069	110892416	C C	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG02027.hp2 HG02129.hp2 others(6): Show HG00423.hp1 HG02027.hp2 HG02129.hp2 HG02976.hp2 NA18962.hp1 NA18974.hp1 NA18974.hp2 NA18986.hp2 NA19068.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0001 a0001c0001t0005	a0001c0001t0001g0084 a0001c0001t0001g0115 a0001c0001t0001g0120 others(6): Show a0001c0001t0001g0084 a0001c0001t0001g0115 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0133 a0001c0001t0001g0240 a0001c0001t0001g0245 a0001c0001t0001g0250 a0001c0001t0005g0142	9	362	0.0249	22	c.691 others(37): Show c.691+611_691+612insTTTTTTTTTTTTTTTTTTTTTT	ANKRD10	ENSG00000088448.14	transcript	ENST00000267339.6	protein_coding	4/5			chr13	TogoVar
ANKRD11_chr16_89262630_89495561	89290246	G G	GGGGGTAG others(15): Show GGGGGTAGGCTCAGGGCTCCAGC	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG02451.hp1 HG00639.hp2 HG02451.hp1	a0003 a0003	a0003c0017 a0003c0017	a0003c0017t0003 a0003c0017t0003	a0003c0017t0003g0028 a0003c0017t0003g0199 a0003c0017t0003g0028 a0003c0017t0003g0199	2	310	0.0065	22	c.601 others(37): Show c.601+378_601+379insGCTGGAGCCCTGAGCCTACCCC	ANKRD11	ENSG00000167522.17	transcript	ENST00000301030.10	protein_coding	6/12			chr16	TogoVar
ANKRD11_chr16_89262630_89495561	89384879	C C	CTTTTTTT others(15): Show CTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01070.hp1 NA19012.hp1 HG01070.hp1 NA19012.hp1	a0003 a0004 a0003 a0004	a0003c0015 a0004c0004 a0003c0015 a0004c0004	a0003c0015t0001 a0004c0004t0001 a0003c0015t0001 a0004c0004t0001	a0003c0015t0001g0006 a0004c0004t0001g0288 a0003c0015t0001g0006 a0004c0004t0001g0288	2	310	0.0065	22	c.-60 others(41): Show c.-60+33383_-60+33404dupAAAAAAAAAAAAAAAAAAAAAA	ANKRD11	ENSG00000167522.17	transcript	ENST00000301030.10	protein_coding	2/12			chr16	TogoVar
ANKRD11_chr16_89262630_89495561	89415829	C C	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01257.hp2 HG01358.hp2 HG03516.hp2 others(7): Show HG01257.hp2 HG01358.hp2 HG03516.hp2 HG03540.hp2 HG04115.hp1 NA18947.hp2 NA18993.hp1 NA19010.hp2 NA19067.hp1 NA19086.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0009	a0001c0001 a0002c0002 a0003c0003 others(2): Show a0001c0001 a0002c0002 a0003c0003 a0004c0004 a0009c0016	a0001c0001t0001 a0002c0002t0002 a0003c0003t0001 others(2): Show a0001c0001t0001 a0002c0002t0002 a0003c0003t0001 a0004c0004t0001 a0009c0016t0001	a0001c0001t0001g0181 a0001c0001t0001g0184 a0001c0001t0001g0187 others(7): Show a0001c0001t0001g0181 a0001c0001t0001g0184 a0001c0001t0001g0187 a0001c0001t0001g0198 a0002c0002t0002g0289 a0003c0003t0001g0202 a0004c0004t0001g0234 a0004c0004t0001g0257 a0004c0004t0001g0261 a0009c0016t0001g0308	10	310	0.0323	22	c.-60 others(39): Show c.-60+2454_-60+2455insTTTTTTTTTTTTTTTTTTTTTT	ANKRD11	ENSG00000167522.17	transcript	ENST00000301030.10	protein_coding	2/12			chr16	TogoVar
ANKRD12_chr18_9131781_9290985	9157579	G G	GTATATAT others(15): Show GTATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA19005.hp1 NA19081.hp2 NA19005.hp1 NA19081.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0004 a0004c0004t0036 a0004c0004t0004 a0004c0004t0036	a0004c0004t0004g0303 a0004c0004t0036g0293 a0004c0004t0004g0303 a0004c0004t0036g0293	2	318	0.0063	22	c.-52 others(41): Show c.-52+20615_-52+20616insATATATATATATATATATATAT	ANKRD12	ENSG00000101745.17	transcript	ENST00000262126.9	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr18	TogoVar
ANKRD12_chr18_9131781_9290985	9157585	G G	GTATATAT others(15): Show GTATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02132.hp2 HG02132.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0004 a0004c0004t0004	a0004c0004t0004g0288 a0004c0004t0004g0288	1	318	0.0031	22	c.-52 others(41): Show c.-52+20635_-52+20636insATATATATATATATATATATAT	ANKRD12	ENSG00000101745.17	transcript	ENST00000262126.9	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr18	TogoVar
ANKRD16_chr10_5856616_5894893	5881438	T T	TTATAAAT others(15): Show TTATAAATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG03209.hp2 HG03486.hp2 others(1): Show HG02630.hp1 HG03209.hp2 HG03486.hp2 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0026 a0001c0001t0001 a0001c0001t0002 a0001c0001t0026	a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0002g0262 others(1): Show a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0002g0262 a0001c0001t0026g0261	4	392	0.0102	22	c.850 others(39): Show c.850-1063_850-1062insTATATATATATATATATTTATA	ANKRD16	ENSG00000134461.16	transcript	ENST00000380094.10	protein_coding	5/7			chr10	TogoVar
ANKRD17_chr4_73068376_73263798	73086919	A A	AAAAAAAA others(15): Show AAAAAAAAAAAAAATATATATAT	intron_variant intron_variant	MODIFIER	HG01123.hp1 HG01192.hp1 HG01123.hp1 HG01192.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0022 a0001c0002t0002g0105 a0001c0002t0002g0022 a0001c0002t0002g0105	2	292	0.0069	22	c.696 others(41): Show c.6962-1474_6962-1473insATATATATATTTTTTTTTTTTT	ANKRD17	ENSG00000132466.20	transcript	ENST00000358602.9	protein_coding	29/33			chr4	TogoVar
ANKRD17_chr4_73068376_73263798	73086919	A A	AAAAAAAA others(15): Show AAAAAAAAAAAATATATATATAT	intron_variant intron_variant	MODIFIER	HG02056.hp2 HG02056.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0170 a0001c0002t0002g0170	1	292	0.0034	22	c.696 others(41): Show c.6962-1474_6962-1473insATATATATATATTTTTTTTTTT	ANKRD17	ENSG00000132466.20	transcript	ENST00000358602.9	protein_coding	29/33			chr4	TogoVar
ANKRD17_chr4_73068376_73263798	73086919	A A	AAAAAAAA others(15): Show AAAAAAAAAATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01099.hp2 HG01257.hp2 others(2): Show HG00738.hp1 HG01099.hp2 HG01257.hp2 NA18952.hp1 NA19068.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0002 a0001c0002t0001 a0001c0002t0002	a0001c0002t0001g0088 a0001c0002t0002g0050 a0001c0002t0002g0129 others(2): Show a0001c0002t0001g0088 a0001c0002t0002g0050 a0001c0002t0002g0129 a0001c0002t0002g0146 a0001c0002t0002g0292	5	292	0.0171	22	c.696 others(41): Show c.6962-1474_6962-1473insATATATATATATATTTTTTTTT	ANKRD17	ENSG00000132466.20	transcript	ENST00000358602.9	protein_coding	29/33			chr4	TogoVar
ANKRD17_chr4_73068376_73263798	73086919	A A	AAAAAAAA others(15): Show AAAAAAAATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01168.hp2 NA18999.hp2 NA21309.hp2 HG01168.hp2 NA18999.hp2 NA21309.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0002 a0001c0003t0003 a0001c0002t0002 a0001c0003t0003	a0001c0002t0002g0048 a0001c0002t0002g0128 a0001c0003t0003g0248 a0001c0002t0002g0048 a0001c0002t0002g0128 a0001c0003t0003g0248	3	292	0.0103	22	c.696 others(41): Show c.6962-1474_6962-1473insATATATATATATATATTTTTTT	ANKRD17	ENSG00000132466.20	transcript	ENST00000358602.9	protein_coding	29/33			chr4	TogoVar
ANKRD17_chr4_73068376_73263798	73086919	A A	AATATATA others(15): Show AATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0156 a0001c0001t0001g0156	1	292	0.0034	22	c.696 others(41): Show c.6962-1495_6962-1474dupATATATATATATATATATATAT	ANKRD17	ENSG00000132466.20	transcript	ENST00000358602.9	protein_coding	29/33			chr4	TogoVar
ANKRD17_chr4_73068376_73263798	73158186	A A	AAGAAAGA others(15): Show AAGAAAGAAAGAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	NA18979.hp1 NA18979.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0089 a0001c0002t0002g0089	1	292	0.0034	22	c.705 others(39): Show c.705-2021_705-2020insCTTTCTTTCTTTCTTTCTTTCT	ANKRD17	ENSG00000132466.20	transcript	ENST00000358602.9	protein_coding	3/33			chr4	TogoVar
ANKRD17_chr4_73068376_73263798	73171178	G G	GGAGAGAG others(15): Show GGAGAGAGAGAGAGAGAGAGAGA	intron_variant intron_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0079 a0001c0002t0002g0079	1	292	0.0034	22	c.547 others(39): Show c.547+6180_547+6201dupTCTCTCTCTCTCTCTCTCTCTC	ANKRD17	ENSG00000132466.20	transcript	ENST00000358602.9	protein_coding	2/33			chr4	TogoVar
ANKRD17_chr4_73068376_73263798	73191339	A A	ATGTGTGT others(15): Show ATGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0055 a0001c0001t0001g0055	1	292	0.0034	22	c.394 others(41): Show c.394-13807_394-13806insCACACACACACACACACACACA	ANKRD17	ENSG00000132466.20	transcript	ENST00000358602.9	protein_coding	1/33			chr4	TogoVar
ANKRD17_chr4_73068376_73263798	73191341	A A	ATATGTGT others(15): Show ATATGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01975.hp1 NA18956.hp2 NA20805.hp2 HG01975.hp1 NA18956.hp2 NA20805.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0006c0023 a0001c0001 a0006c0023	a0001c0001t0001 a0006c0023t0001 a0001c0001t0001 a0006c0023t0001	a0001c0001t0001g0044 a0001c0001t0001g0046 a0006c0023t0001g0231 a0001c0001t0001g0044 a0001c0001t0001g0046 a0006c0023t0001g0231	3	292	0.0103	22	c.394 others(41): Show c.394-13809_394-13808insCACACACACACACACACACATA	ANKRD17	ENSG00000132466.20	transcript	ENST00000358602.9	protein_coding	1/33			chr4	TogoVar
ANKRD17_chr4_73068376_73263798	73191341	A A	ATGTGTGT others(15): Show ATGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01515.hp2 HG02630.hp2 HG03017.hp2 others(1): Show HG01515.hp2 HG02630.hp2 HG03017.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0014 a0001c0001 a0001c0004 a0001c0014	a0001c0001t0001 a0001c0004t0001 a0001c0014t0001 a0001c0001t0001 a0001c0004t0001 a0001c0014t0001	a0001c0001t0001g0006 a0001c0004t0001g0064 a0001c0004t0001g0066 others(1): Show a0001c0001t0001g0006 a0001c0004t0001g0064 a0001c0004t0001g0066 a0001c0014t0001g0015	4	292	0.0137	22	c.394 others(41): Show c.394-13830_394-13809dupCACACACACACACACACACACA	ANKRD17	ENSG00000132466.20	transcript	ENST00000358602.9	protein_coding	1/33			chr4	TogoVar

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