Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LURAP1L_chr9_12770020_12828060	12788189	A A	AAGAAAGA others(15): Show AAGAAAGAAAGAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG01081.hp1 HG01255.hp1 others(12): Show HG00544.hp2 HG01081.hp1 HG01255.hp1 HG02165.hp2 HG03239.hp1 NA18939.hp1 NA18939.hp2 NA18957.hp1 NA18967.hp2 NA18969.hp2 NA18998.hp1 NA19001.hp2 NA19002.hp1 NA19064.hp1 NA19082.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0027 a0002c0002t0002	a0001c0001t0001g0015 a0001c0001t0001g0115 a0001c0001t0001g0197 others(12): Show a0001c0001t0001g0015 a0001c0001t0001g0115 a0001c0001t0001g0197 a0001c0001t0001g0227 a0001c0001t0001g0233 a0001c0001t0001g0254 a0001c0001t0002g0106 a0001c0001t0002g0180 a0001c0001t0002g0187 a0001c0001t0002g0252 a0001c0001t0003g0246 a0001c0001t0004g0261 a0001c0001t0027g0148 a0002c0002t0002g0057 a0002c0002t0002g0060	15	418	0.0359	22	c.312 others(41): Show c.312+12167_312+12168insGAAAGAAAGAAAGAAAGAGAAA	LURAP1L	ENSG00000153714.6	transcript	ENST00000319264.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr9	TogoVar
LUZP1_chr1_23079030_23173856	23117454	C C	CCTCTCTC others(15): Show CCTCTCTCTCTCTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0008 a0008	a0008c0008 a0008c0008	a0008c0008t0009 a0008c0008t0009	a0008c0008t0009g0166 a0008c0008t0009g0166	1	322	0.0031	22	c.-22 others(41): Show c.-225-8349_-225-8328dupAGAGAGAGAGAGAGAGAGAGAG	LUZP1	ENSG00000169641.15	transcript	ENST00000302291.9	protein_coding	1/3			chr1	TogoVar
LUZP2_chr11_24492053_25087638	24699678	T T	TATATACA others(15): Show TATATACACAGACATACACACAC	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01256.hp1 HG01258.hp1 others(10): Show HG01109.hp1 HG01256.hp1 HG01258.hp1 HG01891.hp2 HG02451.hp2 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG03017.hp1 HG03130.hp2 HG03540.hp1 NA18522.hp1 NA19030.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0002 a0001c0001 a0001c0003 a0002c0002	a0001c0001t0003 a0001c0001t0006 a0001c0001t0010 others(8): Show a0001c0001t0003 a0001c0001t0006 a0001c0001t0010 a0001c0001t0014 a0001c0001t0017 a0001c0001t0020 a0001c0001t0030 a0001c0001t0031 a0001c0001t0039 a0001c0003t0019 a0002c0002t0009	a0001c0001t0003g0036 a0001c0001t0003g0095 a0001c0001t0006g0035 others(10): Show a0001c0001t0003g0036 a0001c0001t0003g0095 a0001c0001t0006g0035 a0001c0001t0006g0115 a0001c0001t0010g0037 a0001c0001t0014g0044 a0001c0001t0017g0018 a0001c0001t0020g0097 a0001c0001t0030g0108 a0001c0001t0031g0109 a0001c0001t0039g0034 a0001c0003t0019g0096 a0002c0002t0009g0005	13	116	0.1121	22	c.63- others(39): Show c.63-29478_63-29477insTACACACACATATACACAGACA	LUZP2	ENSG00000187398.12	transcript	ENST00000336930.11	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr11	TogoVar
LUZP2_chr11_24492053_25087638	24742057	T T	TTATATAT others(15): Show TTATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03453.hp1 HG03453.hp1	a0002 a0002	a0002c0007 a0002c0007	a0002c0007t0028 a0002c0007t0028	a0002c0007t0028g0068 a0002c0007t0028g0068	1	116	0.0086	22	c.333 others(39): Show c.333+3774_333+3775insATATATATATATATATATATAT	LUZP2	ENSG00000187398.12	transcript	ENST00000336930.11	protein_coding	4/11		INFO_REALIGN_3_PRIME	chr11	TogoVar
LUZP2_chr11_24492053_25087638	24742057	T T	TTTTATAT others(15): Show TTTTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0032 a0001c0003t0032	a0001c0003t0032g0056 a0001c0003t0032g0056	1	116	0.0086	22	c.333 others(39): Show c.333+3756_333+3757insTTATATATATATATATATATAT	LUZP2	ENSG00000187398.12	transcript	ENST00000336930.11	protein_coding	4/11		INFO_REALIGN_3_PRIME	chr11	TogoVar
LUZP2_chr11_24492053_25087638	24764490	T T	TAAAAAAA others(15): Show TAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0065 a0001c0001t0002g0065	1	116	0.0086	22	c.396 others(39): Show c.396+1187_396+1208dupAAAAAAAAAAAAAAAAAAAAAA	LUZP2	ENSG00000187398.12	transcript	ENST00000336930.11	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr11	TogoVar
LUZP2_chr11_24492053_25087638	24774332	T T	TTCTCTCT others(15): Show TTCTCTCTCTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG03017.hp2 HG03017.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0023 a0002c0002t0023	a0002c0002t0023g0022 a0002c0002t0023g0022	1	116	0.0086	22	c.396 others(41): Show c.396+11034_396+11055dupCTCTCTCTCTCTCTCTCTCTCT	LUZP2	ENSG00000187398.12	transcript	ENST00000336930.11	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr11	TogoVar
LUZP2_chr11_24492053_25087638	24774362	C C	CTCTCTCT others(15): Show CTCTCTCTCTCTCTCTCTCTCTA	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0081 a0001c0001t0003g0081	1	116	0.0086	22	c.396 others(41): Show c.396+11055_396+11056insCTCTCTCTCTCTCTCTCTCTAT	LUZP2	ENSG00000187398.12	transcript	ENST00000336930.11	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr11	TogoVar
LUZP2_chr11_24492053_25087638	24984524	T T	TTATATAT others(15): Show TTATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02080.hp1 HG02165.hp2 HG02080.hp1 HG02165.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0012 a0001c0001t0007g0103 a0001c0001t0007g0012 a0001c0001t0007g0103	2	116	0.0172	22	c.765 others(39): Show c.765+1236_765+1257dupTATATATATATATATATATATA	LUZP2	ENSG00000187398.12	transcript	ENST00000336930.11	protein_coding	9/11		INFO_REALIGN_3_PRIME	chr11	TogoVar
LUZP2_chr11_24492053_25087638	24984549	T T	TATATATA others(15): Show TATATATATATATATATATATAA	intron_variant intron_variant	MODIFIER	HG01516.hp1 HG02280.hp1 HG03017.hp2 others(1): Show HG01516.hp1 HG02280.hp1 HG03017.hp2 HG03453.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0001c0001t0005 a0001c0001t0033 others(1): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0033 a0002c0002t0023	a0001c0001t0002g0040 a0001c0001t0005g0102 a0001c0001t0033g0112 others(1): Show a0001c0001t0002g0040 a0001c0001t0005g0102 a0001c0001t0033g0112 a0002c0002t0023g0022	4	116	0.0345	22	c.765 others(39): Show c.765+1257_765+1258insTATATATATATATATATATAAA	LUZP2	ENSG00000187398.12	transcript	ENST00000336930.11	protein_coding	9/11		INFO_REALIGN_3_PRIME	chr11	TogoVar
LUZP2_chr11_24492053_25087638	25040343	A A	ATTTTTTT others(15): Show ATTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01975.hp1 HG01975.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0002 a0001c0001t0014g0002	1	116	0.0086	22	c.766 others(39): Show c.766-9675_766-9674insTTTTTTTTTTTTTTTTTTTTTT	LUZP2	ENSG00000187398.12	transcript	ENST00000336930.11	protein_coding	9/11		INFO_REALIGN_3_PRIME	chr11	TogoVar
LVRN_chr5_115957475_116032606	115961323	A A	AACACACA others(15): Show AACACACACACACACACACACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01069.hp1 HG01071.hp1 HG02148.hp1 HG01069.hp1 HG01071.hp1 HG02148.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0134 a0001c0001t0001g0175 a0001c0001t0001g0189 a0001c0001t0001g0134 a0001c0001t0001g0175 a0001c0001t0001g0189	3	418	0.0072	22	c.-12 others(33): Show c.-1295_-1294insACACACACACACACACACACAC	LVRN	ENSG00000172901.21	transcript	ENST00000357872.9	protein_coding		1151		chr5	TogoVar
LY75_chr2_159798355_159909756	159848093	T T	TATACACA others(15): Show TATACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	NA18944.hp1 NA18944.hp2 NA18950.hp2 others(3): Show NA18944.hp1 NA18944.hp2 NA18950.hp2 NA18975.hp2 NA19009.hp2 NA20752.hp1	a0001 a0001	a0001c0003 a0001c0015 a0001c0003 a0001c0015	a0001c0003t0001 a0001c0003t0003 a0001c0015t0002 a0001c0003t0001 a0001c0003t0003 a0001c0015t0002	a0001c0003t0001g0269 a0001c0003t0003g0272 a0001c0015t0002g0278 others(3): Show a0001c0003t0001g0269 a0001c0003t0003g0272 a0001c0015t0002g0278 a0001c0015t0002g0288 a0001c0015t0002g0300 a0001c0015t0002g0302	6	330	0.0182	22	c.315 others(41): Show c.3150+1886_3150+1887insGTGTGTGTGTGTGTGTGTGTAT	LY75	ENSG00000054219.11	transcript	ENST00000263636.5	protein_coding	23/34			chr2	TogoVar
LY75_chr2_159798355_159909756	159850773	C C	CATATATA others(15): Show CATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01261.hp2 HG03453.hp1 HG00741.hp2 HG01261.hp2 HG03453.hp1	a0004 a0007 a0004 a0007	a0004c0005 a0004c0010 a0007c0051 a0004c0005 a0004c0010 a0007c0051	a0004c0005t0004 a0004c0010t0001 a0007c0051t0002 a0004c0005t0004 a0004c0010t0001 a0007c0051t0002	a0004c0005t0004g0139 a0004c0010t0001g0155 a0007c0051t0002g0156 a0004c0005t0004g0139 a0004c0010t0001g0155 a0007c0051t0002g0156	3	330	0.0091	22	c.288 others(39): Show c.2884-328_2884-307dupATATATATATATATATATATAT	LY75	ENSG00000054219.11	transcript	ENST00000263636.5	protein_coding	21/34			chr2	TogoVar
LY75_chr2_159798355_159909756	159850789	T T	TATATATA others(15): Show TATATATATATATATATATAAAA	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG03710.hp2 NA18973.hp1 others(8): Show HG00408.hp2 HG03710.hp2 NA18973.hp1 NA18975.hp1 NA18979.hp1 NA18981.hp2 NA18987.hp1 NA18990.hp1 NA18999.hp2 NA19085.hp1 NA19090.hp2	a0002 a0010 a0014 a0002 a0010 a0014	a0002c0002 a0002c0011 a0010c0013 others(1): Show a0002c0002 a0002c0011 a0010c0013 a0014c0041	a0002c0002t0002 a0002c0002t0013 a0002c0002t0014 others(3): Show a0002c0002t0002 a0002c0002t0013 a0002c0002t0014 a0002c0011t0002 a0010c0013t0001 a0014c0041t0003	a0002c0002t0002g0096 a0002c0002t0013g0090 a0002c0002t0014g0322 others(8): Show a0002c0002t0002g0096 a0002c0002t0013g0090 a0002c0002t0014g0322 a0002c0011t0002g0049 a0002c0011t0002g0051 a0002c0011t0002g0053 a0002c0011t0002g0054 a0002c0011t0002g0056 a0002c0011t0002g0057 a0010c0013t0001g0101 a0014c0041t0003g0052	11	330	0.0333	22	c.288 others(39): Show c.2884-323_2884-322insTTTTATATATATATATATATAT	LY75	ENSG00000054219.11	transcript	ENST00000263636.5	protein_coding	21/34			chr2	TogoVar
LY75_chr2_159798355_159909756	159850789	T T	TATATATA others(15): Show TATATATATATATATATATATAA	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG01943.hp1 NA18612.hp2 others(3): Show HG01192.hp2 HG01943.hp1 NA18612.hp2 NA18959.hp2 NA18982.hp2 NA19068.hp1	a0002 a0010 a0043 a0002 a0010 a0043	a0002c0002 a0010c0013 a0043c0045 a0002c0002 a0010c0013 a0043c0045	a0002c0002t0002 a0010c0013t0001 a0043c0045t0002 a0002c0002t0002 a0010c0013t0001 a0043c0045t0002	a0002c0002t0002g0061 a0010c0013t0001g0060 a0010c0013t0001g0075 others(3): Show a0002c0002t0002g0061 a0010c0013t0001g0060 a0010c0013t0001g0075 a0010c0013t0001g0079 a0010c0013t0001g0098 a0043c0045t0002g0102	6	330	0.0182	22	c.288 others(39): Show c.2884-323_2884-322insTTATATATATATATATATATAT	LY75	ENSG00000054219.11	transcript	ENST00000263636.5	protein_coding	21/34			chr2	TogoVar
LY75_chr2_159798355_159909756	159850791	T T	TATATATA others(15): Show TATATATATATATATATATAAAA	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01934.hp2 HG01975.hp2 others(2): Show HG01884.hp2 HG01934.hp2 HG01975.hp2 HG01993.hp1 HG02300.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0077 a0002c0002t0002g0089 a0002c0002t0002g0094 others(2): Show a0002c0002t0002g0077 a0002c0002t0002g0089 a0002c0002t0002g0094 a0002c0002t0002g0099 a0002c0002t0002g0103	5	330	0.0152	22	c.288 others(39): Show c.2884-325_2884-324insTTTTATATATATATATATATAT	LY75	ENSG00000054219.11	transcript	ENST00000263636.5	protein_coding	21/34			chr2	TogoVar
LY86_chr6_6583720_6659982	6585667	A A	ATATATAT others(15): Show ATATATATTATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19058.hp1 NA19058.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0196 a0001c0001t0001g0196	1	424	0.0024	22	c.-30 others(33): Show c.-3068_-3067insTATATATTATATATATATATAT	LY86	ENSG00000112799.9	transcript	ENST00000230568.5	protein_coding		3052		chr6	TogoVar
LY86_chr6_6583720_6659982	6585671	T T	TTATATAT others(15): Show TTATATATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00741.hp1 HG01070.hp2 HG01496.hp2 others(7): Show HG00741.hp1 HG01070.hp2 HG01496.hp2 HG02293.hp2 HG02615.hp2 HG03041.hp1 NA18966.hp2 NA18979.hp2 NA19010.hp1 NA19070.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0005 a0001c0001t0001g0177 a0001c0001t0001g0182 others(7): Show a0001c0001t0001g0005 a0001c0001t0001g0177 a0001c0001t0001g0182 a0001c0001t0001g0185 a0001c0001t0001g0191 a0001c0001t0001g0262 a0001c0001t0001g0263 a0001c0001t0001g0265 a0001c0001t0001g0388 a0002c0002t0001g0202	10	424	0.0236	22	c.-30 others(33): Show c.-3064_-3063insTATATATATATATATATATATA	LY86	ENSG00000112799.9	transcript	ENST00000230568.5	protein_coding		3048		chr6	TogoVar
LY96_chr8_73986392_74034079	74002093	T T	TTCTTTCT others(15): Show TTCTTTCTCTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	NA19005.hp2 NA19005.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0054 a0001c0001t0001g0054	1	314	0.0032	22	c.113 others(39): Show c.113-2700_113-2699insTTCTCTCTCTCTCTCTCTCTCT	LY96	ENSG00000154589.7	transcript	ENST00000284818.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr8	TogoVar
LY96_chr8_73986392_74034079	74002093	T T	TTCTTTCT others(15): Show TTCTTTCTTTCTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	NA19090.hp1 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0030 a0001c0001t0001g0030	1	314	0.0032	22	c.113 others(39): Show c.113-2700_113-2699insTTCTTTCTTTCTTTCTTTCTCT	LY96	ENSG00000154589.7	transcript	ENST00000284818.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr8	TogoVar
LY96_chr8_73986392_74034079	74002095	C C	CTTTCTTT others(15): Show CTTTCTTTCTTTCTTTCTTTCTT	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG03453.hp2 NA19083.hp2 HG02258.hp2 HG03453.hp2 NA19083.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0010 a0001c0001t0001g0033 a0001c0001t0001g0076 a0001c0001t0001g0010 a0001c0001t0001g0033 a0001c0001t0001g0076	3	314	0.0096	22	c.113 others(39): Show c.113-2700_113-2699insTTCTTTCTTTCTTTCTTTCTTT	LY96	ENSG00000154589.7	transcript	ENST00000284818.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr8	TogoVar
LYAR_chr4_4262701_4295154	4294872	C C	CGTGTATG others(15): Show CGTGTATGTGTGTGTGTGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18956.hp2 NA18956.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0054 a0001c0001t0003g0054	1	436	0.0023	22	c.-49 others(33): Show c.-4945_-4944insACACACACACACACACATACAC	LYAR	ENSG00000145220.14	transcript	ENST00000343470.9	protein_coding		4719		chr4	TogoVar
LYNX1_chr8_142766202_142782202	142777367	C C	CCCCGCCC others(15): Show CCCCGCCCCGGACCCGCCCCGGA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02523.hp1 HG02523.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0009 a0001c0001t0007g0009	1	444	0.0023	22	c.-42 others(31): Show c.-427_-426insTCCGGGGCGGGTCCGGGGCGGG	LYNX1	ENSG00000180155.20	transcript	ENST00000652477.1	protein_coding		166		chr8	TogoVar
LYN_chr8_55874835_56019169	55887575	T T	TATACACA others(15): Show TATACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	NA19012.hp2 NA19012.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0165 a0001c0001t0002g0165	1	288	0.0035	22	c.-6+ others(37): Show c.-6+7473_-6+7474insTACACACACACACACACACACA	LYN	ENSG00000254087.8	transcript	ENST00000519728.6	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr8	TogoVar
LYN_chr8_55874835_56019169	55911098	T T	TATATATA others(15): Show TATATATATATATATATACACAC	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0022 a0001c0002t0022	a0001c0002t0022g0005 a0001c0002t0022g0005	1	288	0.0035	22	c.-5- others(39): Show c.-5-30756_-5-30755insTATATATATATATATACACACA	LYN	ENSG00000254087.8	transcript	ENST00000519728.6	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr8	TogoVar
LYN_chr8_55874835_56019169	55942333	A A	ATATATAT others(15): Show ATATATATGTGTATATATATGTG	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0054 a0001c0001t0054	a0001c0001t0054g0131 a0001c0001t0054g0131	1	288	0.0035	22	c.132 others(37): Show c.132+349_132+350insGTGTATATATATGTGTATATAT	LYN	ENSG00000254087.8	transcript	ENST00000519728.6	protein_coding	2/12		INFO_REALIGN_3_PRIME	chr8	TogoVar
LYPD6B_chr2_149033699_149220262	149120383	A A	ATATATAT others(15): Show ATATATATATATATTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	264	0.0038	22	c.-66 others(41): Show c.-66-10499_-66-10498insATATATATATATTTTTTTTTTT	LYPD6B	ENSG00000150556.17	transcript	ENST00000409642.8	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
LYPD6B_chr2_149033699_149220262	149120383	A A	ATATATAT others(15): Show ATATATATATATTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0139 a0001c0001t0001g0139	1	264	0.0038	22	c.-66 others(41): Show c.-66-10499_-66-10498insATATATATATTTTTTTTTTTTT	LYPD6B	ENSG00000150556.17	transcript	ENST00000409642.8	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
LYPD6B_chr2_149033699_149220262	149120383	A A	ATATATAT others(15): Show ATATATATATTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02897.hp2 NA18906.hp2 HG02896.hp2 HG02897.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0135 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0135	3	264	0.0114	22	c.-66 others(41): Show c.-66-10499_-66-10498insATATATATTTTTTTTTTTTTTT	LYPD6B	ENSG00000150556.17	transcript	ENST00000409642.8	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
LYPD6B_chr2_149033699_149220262	149189342	T T	TTATATAT others(15): Show TTATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01123.hp1 HG01515.hp1 HG02258.hp2 others(5): Show HG01123.hp1 HG01515.hp1 HG02258.hp2 HG02818.hp1 HG02818.hp2 NA18970.hp2 NA18971.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0040 a0001c0001t0001g0050 a0001c0001t0001g0071 others(5): Show a0001c0001t0001g0040 a0001c0001t0001g0050 a0001c0001t0001g0071 a0001c0001t0001g0106 a0001c0001t0001g0114 a0001c0001t0001g0200 a0001c0001t0001g0249 a0001c0001t0001g0250	8	264	0.0303	22	c.78- others(39): Show c.78-15906_78-15885dupTATATATATATATATATATATA	LYPD6B	ENSG00000150556.17	transcript	ENST00000409642.8	protein_coding	3/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
LYPD6B_chr2_149033699_149220262	149189367	T T	TATATATA others(15): Show TATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG00621.hp1 HG01099.hp1 others(9): Show HG00609.hp2 HG00621.hp1 HG01099.hp1 HG01175.hp1 HG03688.hp2 HG04115.hp1 NA18950.hp1 NA18964.hp1 NA18984.hp2 NA18990.hp2 NA19062.hp2 NA19079.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0023 a0001c0001t0001g0036 a0001c0001t0001g0037 others(9): Show a0001c0001t0001g0023 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0042 a0001c0001t0001g0057 a0001c0001t0001g0115 a0001c0001t0001g0152 a0001c0001t0001g0155 a0001c0001t0001g0189 a0001c0001t0001g0224 a0001c0001t0001g0230 a0001c0001t0001g0235	12	264	0.0455	22	c.78- others(39): Show c.78-15885_78-15884insTATATATATATATATATATACA	LYPD6B	ENSG00000150556.17	transcript	ENST00000409642.8	protein_coding	3/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
LYPD8_chr1_248734415_248760759	248759962	G G	GTATATAT others(15): Show GTATATATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0273 a0001c0001t0008g0273	1	374	0.0027	22	c.-44 others(33): Show c.-4456_-4455insTATATATATATATATATATATA	LYPD8	ENSG00000259823.6	transcript	ENST00000590317.4	protein_coding		4204		chr1	TogoVar
LYPLA1_chr8_54041367_54106947	54084133	A A	AAAAAAAA others(15): Show AAAAAAAAAATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0034 a0001c0001t0002g0034	1	306	0.0033	22	c.101 others(41): Show c.101+16774_101+16775insATATATATATATATTTTTTTTT	LYPLA1	ENSG00000120992.18	transcript	ENST00000316963.8	protein_coding	2/8			chr8	TogoVar
LYPLAL1_chr1_219168878_219217858	219217379	G G	GGTGTGTG others(15): Show GGTGTGTGTGTGTGTGTGTGTGT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0166 a0001c0001t0002g0166	1	358	0.0028	22	c.56 others(33): Show c.5651_*5652insGTGTGTGTGTGTGTGTGTGTGT	LYPLAL1	ENSG00000143353.12	transcript	ENST00000366928.10	protein_coding		4522		chr1	TogoVar
LYRM1_chr16_20895771_20930006	20904691	T T	TTTTGTGT others(15): Show TTTTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	NA18950.hp2 NA19002.hp2 NA19012.hp1 NA18950.hp2 NA19002.hp2 NA19012.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0028 a0001c0001t0001g0078 a0001c0001t0001g0028 a0001c0001t0001g0078	3	382	0.0079	22	c.-1+ others(37): Show c.-1+3803_-1+3804insTTGTGTGTGTGTGTGTGTGTGT	LYRM1	ENSG00000102897.10	transcript	ENST00000567954.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr16	TogoVar
LYRM1_chr16_20895771_20930006	20927049	C C	CATATATA others(15): Show CATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00642.hp2 HG00735.hp2 HG00741.hp1 others(8): Show HG00642.hp2 HG00735.hp2 HG00741.hp1 HG01081.hp2 HG01358.hp1 HG01884.hp1 HG02280.hp2 HG03139.hp1 HG03195.hp2 HG04199.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0013 a0001c0001t0001g0026 others(8): Show a0001c0001t0001g0003 a0001c0001t0001g0013 a0001c0001t0001g0026 a0001c0001t0001g0041 a0001c0001t0001g0075 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0111 a0001c0001t0001g0127 a0001c0001t0001g0224	11	382	0.0288	22	c.29 others(33): Show c.2933_*2934insATATATATATATATATATATAT	LYRM1	ENSG00000102897.10	transcript	ENST00000567954.6	protein_coding		2044		chr16	TogoVar
LYRM4_chr6_5103419_5265950	5118094	A A	ATATATAT others(15): Show ATATATATATATATTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG01069.hp2 HG02027.hp2 others(3): Show HG00621.hp1 HG01069.hp2 HG02027.hp2 NA18940.hp2 NA18946.hp2 NA19057.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0051 a0001c0001t0001g0099 a0001c0001t0001g0129 others(3): Show a0001c0001t0001g0051 a0001c0001t0001g0099 a0001c0001t0001g0129 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0142	6	286	0.0210	22	c.208 others(39): Show c.208-8604_208-8603insAAAAAAAAAATATATATATATA	LYRM4	ENSG00000214113.11	transcript	ENST00000330636.9	protein_coding	2/2			chr6	TogoVar
LYRM4_chr6_5103419_5265950	5118094	A A	ATATATAT others(15): Show ATATATATATATTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG01261.hp2 HG01952.hp1 others(5): Show HG00558.hp1 HG01261.hp2 HG01952.hp1 HG02293.hp1 HG04184.hp2 NA19005.hp1 NA19082.hp2 NA19090.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0003 a0001c0001t0001 a0002c0002t0003	a0001c0001t0001g0056 a0001c0001t0001g0127 a0001c0001t0001g0128 others(5): Show a0001c0001t0001g0056 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0141 a0001c0001t0001g0146 a0001c0001t0001g0150 a0002c0002t0003g0201 a0002c0002t0003g0215	8	286	0.0280	22	c.208 others(39): Show c.208-8604_208-8603insAAAAAAAAAAAATATATATATA	LYRM4	ENSG00000214113.11	transcript	ENST00000330636.9	protein_coding	2/2			chr6	TogoVar
LYRM4_chr6_5103419_5265950	5118094	A A	ATATATAT others(15): Show ATATATATATTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18941.hp1 NA19063.hp2 NA20129.hp1 NA18941.hp1 NA19063.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0076 a0001c0001t0001g0126 a0001c0001t0001g0138 a0001c0001t0001g0076 a0001c0001t0001g0126 a0001c0001t0001g0138	3	286	0.0105	22	c.208 others(39): Show c.208-8604_208-8603insAAAAAAAAAAAAAATATATATA	LYRM4	ENSG00000214113.11	transcript	ENST00000330636.9	protein_coding	2/2			chr6	TogoVar
LYRM4_chr6_5103419_5265950	5138487	C C	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0018 a0002c0002t0018	a0002c0002t0018g0190 a0002c0002t0018g0190	1	286	0.0035	22	c.208 others(41): Show c.208-29018_208-28997dupTTTTTTTTTTTTTTTTTTTTTT	LYRM4	ENSG00000214113.11	transcript	ENST00000330636.9	protein_coding	2/2			chr6	TogoVar
LYRM7_chr5_131165944_131210428	131181302	A A	AAAAAAAA others(15): Show AAAAAAAATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG03669.hp1 HG00738.hp1 HG03669.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0017 a0001c0001t0013 a0001c0001t0017	a0001c0001t0013g0113 a0001c0001t0017g0242 a0001c0001t0013g0113 a0001c0001t0017g0242	2	300	0.0067	22	c.92- others(35): Show c.92-926_92-925insAAAAAATATATATATATATATA	LYRM7	ENSG00000186687.16	transcript	ENST00000379380.9	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr5	TogoVar
LYRM7_chr5_131165944_131210428	131181302	A A	AAAATATA others(15): Show AAAATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18962.hp2 NA18998.hp1 NA18962.hp2 NA18998.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0019 a0001c0001t0006 a0001c0001t0019	a0001c0001t0006g0266 a0001c0001t0019g0126 a0001c0001t0006g0266 a0001c0001t0019g0126	2	300	0.0067	22	c.92- others(35): Show c.92-926_92-925insAATATATATATATATATATATA	LYRM7	ENSG00000186687.16	transcript	ENST00000379380.9	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr5	TogoVar
LYRM7_chr5_131165944_131210428	131181302	A A	AATATATA others(15): Show AATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18949.hp2 NA18994.hp1 NA19068.hp2 NA18949.hp2 NA18994.hp1 NA19068.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0006 a0001c0001t0019 a0001c0001t0004 a0001c0001t0006 a0001c0001t0019	a0001c0001t0004g0190 a0001c0001t0006g0145 a0001c0001t0019g0146 a0001c0001t0004g0190 a0001c0001t0006g0145 a0001c0001t0019g0146	3	300	0.0100	22	c.92- others(35): Show c.92-912_92-911insTATATATATATATATATATATA	LYRM7	ENSG00000186687.16	transcript	ENST00000379380.9	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr5	TogoVar
LYRM7_chr5_131165944_131210428	131181316	T T	TATATATA others(15): Show TATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	NA19005.hp1 NA19005.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0124 a0001c0001t0001g0124	1	300	0.0033	22	c.92- others(35): Show c.92-912_92-911insTATATATATATATATATACACA	LYRM7	ENSG00000186687.16	transcript	ENST00000379380.9	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr5	TogoVar
LYSMD1_chr1_151154748_151170902	151160238	C C	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00140.hp2 HG03486.hp1 HG03688.hp2 HG00140.hp2 HG03486.hp1 HG03688.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0028 a0001c0001t0028	a0001c0001t0028g0097 a0001c0001t0028g0135 a0001c0001t0028g0145 a0001c0001t0028g0097 a0001c0001t0028g0135 a0001c0001t0028g0145	3	344	0.0087	22	c.64 others(31): Show c.643_*644insTTTTTTTTTTTTTTTTTTTTTT	LYSMD1	ENSG00000163155.12	transcript	ENST00000368908.10	protein_coding	3/3	643		chr1	TogoVar
LYSMD3_chr5_90510626_90534584	90514755	A A	AACACACA others(15): Show AACACACACACACACACACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00408.hp1 HG00639.hp1 HG01952.hp1 others(14): Show HG00408.hp1 HG00639.hp1 HG01952.hp1 HG02809.hp1 HG02896.hp2 HG02922.hp2 HG03453.hp1 NA18939.hp2 NA18941.hp2 NA18942.hp2 NA18951.hp1 NA18952.hp2 NA18990.hp2 NA19003.hp2 NA19056.hp2 NA19078.hp1 NA19081.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0012 a0001c0001t0003 a0001c0001t0004 a0001c0001t0012	a0001c0001t0003g0003 a0001c0001t0003g0007 a0001c0001t0003g0011 others(6): Show a0001c0001t0003g0003 a0001c0001t0003g0007 a0001c0001t0003g0011 a0001c0001t0003g0021 a0001c0001t0003g0087 a0001c0001t0003g0098 a0001c0001t0003g0099 a0001c0001t0004g0005 a0001c0001t0012g0029	17	410	0.0415	22	c.40 others(33): Show c.4063_*4064insGTGTGTGTGTGTGTGTGTGTGT	LYSMD3	ENSG00000176018.13	transcript	ENST00000315948.11	protein_coding		870		chr5	TogoVar
LYZL1_chr10_29284070_29316232	29306549	C C	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03209.hp1 NA20129.hp1 HG03209.hp1 NA20129.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0001 a0003c0004t0005 a0001c0001t0001 a0003c0004t0005	a0001c0001t0001g0173 a0003c0004t0005g0316 a0001c0001t0001g0173 a0003c0004t0005g0316	2	442	0.0045	22	c.299 others(39): Show c.299-3556_299-3535dupAAAAAAAAAAAAAAAAAAAAAA	LYZL1	ENSG00000120563.10	transcript	ENST00000649382.2	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr10	TogoVar
LYZL2_chr10_30606779_30634753	30617678	A A	AAAAAAAA others(15): Show AAAAAAAAAAAAAAAAAAAAAAG	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG01358.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0265 a0001c0001t0001g0265	1	456	0.0022	22	c.299 others(39): Show c.299-4779_299-4778insCTTTTTTTTTTTTTTTTTTTTT	LYZL2	ENSG00000151033.10	transcript	ENST00000647634.2	protein_coding	3/4			chr10	TogoVar
LZTS1_chr8_20241165_20308963	20274961	C C	CTGTGTGT others(15): Show CTGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG01891.hp2 HG02818.hp2 HG01106.hp2 HG01891.hp2 HG02818.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0009 a0001c0001t0021 a0002c0003t0050 a0001c0001t0009 a0001c0001t0021 a0002c0003t0050	a0001c0001t0009g0388 a0001c0001t0021g0393 a0002c0003t0050g0080 a0001c0001t0009g0388 a0001c0001t0021g0393 a0002c0003t0050g0080	3	406	0.0074	22	c.-13 others(43): Show c.-134-19668_-134-19647dupCACACACACACACACACACACA	LZTS1	ENSG00000061337.16	transcript	ENST00000381569.5	protein_coding	1/3			chr8	TogoVar

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