Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
COL21A1_chr6_56051590_56252580	56098172	G G	GATATATA others(15): Show GATATATAAATACATATATAAAT	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01167.hp2 HG01169.hp2 others(15): Show HG00741.hp1 HG01167.hp2 HG01169.hp2 HG01358.hp1 HG01884.hp1 HG02615.hp2 HG02622.hp2 HG02896.hp2 HG02897.hp2 HG02965.hp1 HG02965.hp2 HG02976.hp2 HG03139.hp2 HG03195.hp1 HG03225.hp2 HG03471.hp1 HG03540.hp1 HG04115.hp2	a0001 a0004 a0005 others(2): Show a0001 a0004 a0005 a0007 a0013	a0001c0007 a0004c0004 a0004c0016 others(3): Show a0001c0007 a0004c0004 a0004c0016 a0005c0009 a0007c0010 a0013c0023	a0001c0007t0002 a0001c0007t0004 a0004c0004t0002 others(6): Show a0001c0007t0002 a0001c0007t0004 a0004c0004t0002 a0004c0004t0004 a0004c0004t0013 a0004c0016t0004 a0005c0009t0004 a0007c0010t0003 a0013c0023t0010	a0001c0007t0002g0261 a0001c0007t0002g0262 a0001c0007t0004g0065 others(15): Show a0001c0007t0002g0261 a0001c0007t0002g0262 a0001c0007t0004g0065 a0001c0007t0004g0077 a0004c0004t0002g0103 a0004c0004t0002g0106 a0004c0004t0004g0026 a0004c0004t0004g0028 a0004c0004t0004g0088 a0004c0004t0013g0004 a0004c0004t0013g0005 a0004c0016t0004g0079 a0005c0009t0004g0055 a0005c0009t0004g0056 a0005c0009t0004g0072 a0007c0010t0003g0069 a0007c0010t0003g0070 a0013c0023t0010g0011	18	264	0.0682	22	c.181 others(41): Show c.1812+3299_1812+3300insATTTATATATGTATTTATATAT	COL21A1	ENSG00000124749.18	transcript	ENST00000244728.10	protein_coding	17/29			chr6	TogoVar
COL21A1_chr6_56051590_56252580	56098174	T T	TATATAAA others(15): Show TATATAAATACATATATAAATAG	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00544.hp2 HG01168.hp2 others(11): Show HG00408.hp2 HG00544.hp2 HG01168.hp2 HG01169.hp1 HG01346.hp1 HG01884.hp2 HG02886.hp1 HG03098.hp2 NA18948.hp2 NA18981.hp1 NA19000.hp2 NA19065.hp1 NA19066.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(3): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0008 a0001c0001t0011 a0001c0002t0001	a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0198 others(11): Show a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0198 a0001c0001t0001g0221 a0001c0001t0001g0241 a0001c0001t0003g0037 a0001c0001t0003g0085 a0001c0001t0003g0092 a0001c0001t0005g0155 a0001c0001t0008g0036 a0001c0001t0008g0061 a0001c0001t0011g0007 a0001c0001t0011g0008 a0001c0002t0001g0222	14	264	0.0530	22	c.181 others(41): Show c.1812+3297_1812+3298insCTATTTATATATGTATTTATAT	COL21A1	ENSG00000124749.18	transcript	ENST00000244728.10	protein_coding	17/29			chr6	TogoVar
COL21A1_chr6_56051590_56252580	56098658	T T	TATATATA others(15): Show TATATATATATAAATATATATAA	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00639.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0165 a0001c0001t0001g0165	1	264	0.0038	22	c.181 others(41): Show c.1812+2813_1812+2814insTTATATATATTTATATATATAT	COL21A1	ENSG00000124749.18	transcript	ENST00000244728.10	protein_coding	17/29			chr6	TogoVar
COL21A1_chr6_56051590_56252580	56121560	G G	GTATATAT others(15): Show GTATATATATATATGTATATGTA	intron_variant intron_variant	MODIFIER	HG03704.hp1 HG03834.hp1 HG03704.hp1 HG03834.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0248 a0001c0002t0002g0249 a0001c0002t0002g0248 a0001c0002t0002g0249	2	264	0.0076	22	c.175 others(41): Show c.1758+2480_1758+2501dupTACATATACATATATATATATA	COL21A1	ENSG00000124749.18	transcript	ENST00000244728.10	protein_coding	16/29			chr6	TogoVar
COL21A1_chr6_56051590_56252580	56148338	C C	CAGAGAGA others(15): Show CAGAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG02257.hp1 HG02647.hp1 others(7): Show HG01168.hp1 HG02257.hp1 HG02647.hp1 HG03098.hp1 HG03098.hp2 HG03195.hp2 HG03209.hp1 HG03704.hp2 NA18522.hp1 NA19065.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0018 a0001c0024 others(1): Show a0001c0001 a0001c0018 a0001c0024 a0002c0008	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(4): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0008 a0001c0018t0001 a0001c0024t0022 a0002c0008t0006	a0001c0001t0001g0102 a0001c0001t0001g0146 a0001c0001t0003g0029 others(7): Show a0001c0001t0001g0102 a0001c0001t0001g0146 a0001c0001t0003g0029 a0001c0001t0003g0037 a0001c0001t0003g0047 a0001c0001t0005g0227 a0001c0001t0008g0059 a0001c0018t0001g0136 a0001c0024t0022g0148 a0002c0008t0006g0021	10	264	0.0379	22	c.143 others(41): Show c.1435-6377_1435-6356dupCTCTCTCTCTCTCTCTCTCTCT	COL21A1	ENSG00000124749.18	transcript	ENST00000244728.10	protein_coding	10/29			chr6	TogoVar
COL22A1_chr8_138583235_138919041	138663012	T T	TCACACAC others(15): Show TCACACACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG02738.hp1 HG02886.hp2 HG03831.hp1 others(1): Show HG02738.hp1 HG02886.hp2 HG03831.hp1 NA19060.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0006 a0001c0001 a0001c0002 a0001c0006	a0001c0001t0001 a0001c0002t0001 a0001c0002t0005 others(1): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0005 a0001c0006t0001	a0001c0001t0001g0082 a0001c0002t0001g0049 a0001c0002t0005g0141 others(1): Show a0001c0001t0001g0082 a0001c0002t0001g0049 a0001c0002t0005g0141 a0001c0006t0001g0062	4	158	0.0253	22	c.318 others(39): Show c.3186+692_3186+693insTGTGTGTGTGTGTGTGTGTGTG	COL22A1	ENSG00000169436.18	transcript	ENST00000303045.11	protein_coding	42/64			chr8	TogoVar
COL23A1_chr5_178232618_178595393	178249716	A A	ACACACAC others(15): Show ACACACACACACACACTCTCTCT	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0123 a0001c0001t0003g0123	1	236	0.0042	22	c.105 others(39): Show c.1059+344_1059+345insAGAGAGAGTGTGTGTGTGTGTG	COL23A1	ENSG00000050767.18	transcript	ENST00000390654.8	protein_coding	18/28			chr5	TogoVar
COL23A1_chr5_178232618_178595393	178249716	A A	ACACACAC others(15): Show ACACACACACACTCACTCTCTCT	intron_variant intron_variant	MODIFIER	HG01168.hp2 HG01168.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0005 a0001c0004t0005	a0001c0004t0005g0060 a0001c0004t0005g0060	1	236	0.0042	22	c.105 others(39): Show c.1059+344_1059+345insAGAGAGAGTGAGTGTGTGTGTG	COL23A1	ENSG00000050767.18	transcript	ENST00000390654.8	protein_coding	18/28			chr5	TogoVar
COL23A1_chr5_178232618_178595393	178258262	T T	TATATATA others(15): Show TATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01071.hp2 HG01070.hp2 HG01071.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0004 a0002c0003t0004	a0002c0003t0004g0099 a0002c0003t0004g0100 a0002c0003t0004g0099 a0002c0003t0004g0100	2	236	0.0085	22	c.730 others(37): Show c.730-696_730-695insGTGTATATATATATATATATAT	COL23A1	ENSG00000050767.18	transcript	ENST00000390654.8	protein_coding	12/28			chr5	TogoVar
COL23A1_chr5_178232618_178595393	178258262	T T	TATATATA others(15): Show TATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG01952.hp1 HG01952.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0025 a0002c0002t0001g0025	1	236	0.0042	22	c.730 others(37): Show c.730-696_730-695insGTATATATATATATATATATAT	COL23A1	ENSG00000050767.18	transcript	ENST00000390654.8	protein_coding	12/28			chr5	TogoVar
COL24A1_chr1_85724233_86161772	85799211	A A	AAAAAAGA others(15): Show AAAAAAGAAAGAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	NA18984.hp1 NA18984.hp1	a0006 a0006	a0006c0017 a0006c0017	a0006c0017t0006 a0006c0017t0006	a0006c0017t0006g0009 a0006c0017t0006g0009	1	238	0.0042	22	c.395 others(43): Show c.3952-12751_3952-12750insCTTTCTTTCTTTCTTTCTTTTT	COL24A1	ENSG00000171502.15	transcript	ENST00000370571.7	protein_coding	47/59			chr1	TogoVar
COL24A1_chr1_85724233_86161772	85906264	C C	CTTTTTTT others(15): Show CTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG00741.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0003 a0001c0005t0003	a0001c0005t0003g0060 a0001c0005t0003g0060	1	238	0.0042	22	c.277 others(39): Show c.2778+929_2778+930insAAAAAAAAAAAAAAAAAAAAAA	COL24A1	ENSG00000171502.15	transcript	ENST00000370571.7	protein_coding	28/59			chr1	TogoVar
COL24A1_chr1_85724233_86161772	86011018	T T	TGAGGACA others(15): Show TGAGGACAGGACAGAAAGGTAGG	intron_variant intron_variant	MODIFIER	NA19004.hp1 NA19004.hp1	a0005 a0005	a0005c0004 a0005c0004	a0005c0004t0002 a0005c0004t0002	a0005c0004t0002g0187 a0005c0004t0002g0187	1	238	0.0042	22	c.231 others(41): Show c.2310+6111_2310+6132dupCCTACCTTTCTGTCCTGTCCTC	COL24A1	ENSG00000171502.15	transcript	ENST00000370571.7	protein_coding	19/59			chr1	TogoVar
COL25A1_chr4_108803725_109307658	108835861	C C	CTTTTTTT others(15): Show CTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG02965.hp2 HG03195.hp2 HG00558.hp1 HG02965.hp2 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0002 a0001c0001t0004	a0001c0001t0002g0058 a0001c0001t0002g0088 a0001c0001t0004g0007 a0001c0001t0002g0058 a0001c0001t0002g0088 a0001c0001t0004g0007	3	130	0.0231	22	c.165 others(41): Show c.1657-3450_1657-3429dupAAAAAAAAAAAAAAAAAAAAAA	COL25A1	ENSG00000188517.17	transcript	ENST00000399132.6	protein_coding	31/37			chr4	TogoVar
COL25A1_chr4_108803725_109307658	108999209	C C	CTATCCAT others(15): Show CTATCCATCTGACAAAGGGCTAA	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00323.hp1 others(92): Show HG00140.hp1 HG00140.hp2 HG00323.hp1 HG00558.hp1 HG00558.hp2 HG00639.hp1 HG00735.hp2 HG00741.hp1 HG00741.hp2 HG01071.hp1 HG01071.hp2 HG01109.hp2 HG01167.hp1 HG01167.hp2 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01258.hp1 HG01346.hp1 HG01346.hp2 HG01361.hp1 HG01361.hp2 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02109.hp1 HG02109.hp2 HG02145.hp2 HG02165.hp1 HG02165.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02602.hp2 HG02622.hp2 HG02630.hp2 HG02717.hp2 HG02723.hp2 HG02809.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG03139.hp1 HG03195.hp1 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp2 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp2 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18941.hp1 NA18941.hp2 NA18952.hp1 NA18952.hp2 NA18998.hp1 NA18998.hp2 NA19030.hp1 NA19043.hp1 NA19062.hp1 NA19062.hp2 NA19079.hp1 NA19079.hp2 NA19086.hp1 NA19086.hp2 NA20129.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0003 others(6): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0007 a0001c0009 a0002c0011 a0003c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(37): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0011 a0001c0001t0012 a0001c0001t0016 a0001c0001t0017 a0001c0001t0019 a0001c0001t0020 a0001c0001t0027 a0001c0002t0001 a0001c0002t0003 a0001c0002t0004 a0001c0002t0005 a0001c0002t0007 a0001c0002t0008 a0001c0002t0009 a0001c0002t0010 a0001c0002t0013 a0001c0002t0022 a0001c0002t0025 a0001c0003t0001 a0001c0003t0004 a0001c0003t0008 a0001c0003t0023 a0001c0004t0001 a0001c0004t0002 a0001c0004t0003 a0001c0004t0004 a0001c0004t0029 a0001c0005t0002 a0001c0005t0005 a0001c0007t0018 a0001c0009t0002 a0002c0011t0007 a0003c0008t0003	a0001c0001t0001g0037 a0001c0001t0001g0048 a0001c0001t0001g0059 others(92): Show a0001c0001t0001g0037 a0001c0001t0001g0048 a0001c0001t0001g0059 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0074 a0001c0001t0001g0079 a0001c0001t0001g0099 a0001c0001t0001g0103 a0001c0001t0001g0114 a0001c0001t0001g0121 a0001c0001t0002g0075 a0001c0001t0002g0085 a0001c0001t0002g0091 a0001c0001t0002g0094 a0001c0001t0002g0102 a0001c0001t0002g0104 a0001c0001t0002g0105 a0001c0001t0002g0111 a0001c0001t0002g0113 a0001c0001t0002g0116 a0001c0001t0002g0117 a0001c0001t0002g0120 a0001c0001t0002g0126 a0001c0001t0002g0129 a0001c0001t0003g0002 a0001c0001t0003g0005 a0001c0001t0003g0016 a0001c0001t0003g0018 a0001c0001t0003g0020 a0001c0001t0003g0021 a0001c0001t0003g0025 a0001c0001t0003g0032 a0001c0001t0003g0033 a0001c0001t0004g0004 a0001c0001t0004g0007 a0001c0001t0005g0077 a0001c0001t0005g0078 a0001c0001t0006g0064 a0001c0001t0006g0076 a0001c0001t0007g0090 a0001c0001t0011g0044 a0001c0001t0011g0047 a0001c0001t0012g0106 a0001c0001t0016g0009 a0001c0001t0017g0003 a0001c0001t0019g0023 a0001c0001t0020g0035 a0001c0001t0027g0086 a0001c0002t0001g0038 a0001c0002t0001g0052 a0001c0002t0001g0089 a0001c0002t0001g0093 a0001c0002t0001g0098 a0001c0002t0001g0101 a0001c0002t0001g0110 a0001c0002t0001g0125 a0001c0002t0003g0010 a0001c0002t0004g0011 a0001c0002t0004g0024 a0001c0002t0004g0028 a0001c0002t0004g0031 a0001c0002t0005g0042 a0001c0002t0005g0112 a0001c0002t0007g0115 a0001c0002t0008g0060 a0001c0002t0008g0087 a0001c0002t0009g0006 a0001c0002t0009g0029 a0001c0002t0010g0013 a0001c0002t0010g0030 a0001c0002t0013g0067 a0001c0002t0013g0070 a0001c0002t0022g0073 a0001c0002t0025g0050 a0001c0003t0001g0055 a0001c0003t0001g0057 a0001c0003t0001g0107 a0001c0003t0004g0026 a0001c0003t0008g0036 a0001c0003t0023g0127 a0001c0004t0001g0040 a0001c0004t0001g0043 a0001c0004t0001g0128 a0001c0004t0002g0083 a0001c0004t0003g0014 a0001c0004t0004g0027 a0001c0004t0029g0095 a0001c0005t0002g0123 a0001c0005t0002g0124 a0001c0005t0005g0122 a0001c0007t0018g0015 a0001c0009t0002g0097 a0002c0011t0007g0061 a0003c0008t0003g0034	95	130	0.7308	22	c.438 others(41): Show c.438+11127_438+11148dupTTAGCCCTTTGTCAGATGGATA	COL25A1	ENSG00000188517.17	transcript	ENST00000399132.6	protein_coding	6/37			chr4	TogoVar
COL25A1_chr4_108803725_109307658	109019375	C C	CATATATA others(15): Show CATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG01346.hp2 HG00323.hp1 HG01346.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0008 a0001c0003t0023 a0001c0003t0008 a0001c0003t0023	a0001c0003t0008g0036 a0001c0003t0023g0127 a0001c0003t0008g0036 a0001c0003t0023g0127	2	130	0.0154	22	c.421 others(39): Show c.421-9022_421-9001dupATATATATATATATATATATAT	COL25A1	ENSG00000188517.17	transcript	ENST00000399132.6	protein_coding	5/37			chr4	TogoVar
COL25A1_chr4_108803725_109307658	109250369	T T	TACACACA others(15): Show TACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01258.hp2 HG01884.hp2 others(4): Show HG00741.hp2 HG01258.hp2 HG01884.hp2 HG02717.hp1 HG03516.hp2 HG03942.hp2 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0011 a0001c0001t0012 others(4): Show a0001c0001t0001 a0001c0001t0011 a0001c0001t0012 a0001c0001t0014 a0001c0001t0028 a0001c0002t0005 a0001c0002t0021	a0001c0001t0001g0121 a0001c0001t0011g0044 a0001c0001t0012g0106 others(4): Show a0001c0001t0001g0121 a0001c0001t0011g0044 a0001c0001t0012g0106 a0001c0001t0014g0012 a0001c0001t0028g0084 a0001c0002t0005g0112 a0001c0002t0021g0082	7	130	0.0539	22	c.367 others(41): Show c.367+50192_367+50213dupGTGTGTGTGTGTGTGTGTGTGT	COL25A1	ENSG00000188517.17	transcript	ENST00000399132.6	protein_coding	3/37			chr4	TogoVar
COL25A1_chr4_108803725_109307658	109254469	T T	TTATATAT others(15): Show TTATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02895.hp1 HG02896.hp2 others(1): Show HG02622.hp1 HG02895.hp1 HG02896.hp2 NA19062.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0001 a0001c0002t0022 a0001c0001t0002 a0001c0002t0001 a0001c0002t0022	a0001c0001t0002g0071 a0001c0002t0001g0038 a0001c0002t0001g0093 others(1): Show a0001c0001t0002g0071 a0001c0002t0001g0038 a0001c0002t0001g0093 a0001c0002t0022g0073	4	130	0.0308	22	c.367 others(41): Show c.367+46092_367+46113dupTATATATATATATATATATATA	COL25A1	ENSG00000188517.17	transcript	ENST00000399132.6	protein_coding	3/37			chr4	TogoVar
COL25A1_chr4_108803725_109307658	109254505	A A	ATATATAT others(15): Show ATATATATATATATATATATATG	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01109.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0053 a0001c0003t0001g0053	1	130	0.0077	22	c.367 others(41): Show c.367+46077_367+46078insCATATATATATATATATATATA	COL25A1	ENSG00000188517.17	transcript	ENST00000399132.6	protein_coding	3/37			chr4	TogoVar
COL26A1_chr7_101357875_101564024	101385367	G G	GTATATAT others(15): Show GTATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG00733.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0001 a0002c0004t0001	a0002c0004t0001g0063 a0002c0004t0001g0063	1	174	0.0058	22	c.158 others(41): Show c.158+22196_158+22197insATATATATATATATATATATAT	COL26A1	ENSG00000160963.14	transcript	ENST00000313669.12	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr7	TogoVar
COL26A1_chr7_101357875_101564024	101510027	C C	CTTTTTTT others(15): Show CTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0120 a0001c0001t0011g0120	1	174	0.0058	22	c.386 others(41): Show c.386-23041_386-23040insTTTTTTTTTTTTTTTTTTTTTT	COL26A1	ENSG00000160963.14	transcript	ENST00000313669.12	protein_coding	3/12		INFO_REALIGN_3_PRIME	chr7	TogoVar
COL26A1_chr7_101357875_101564024	101520633	T T	TACACACA others(15): Show TACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG03492.hp1 NA19005.hp2 HG02615.hp2 HG03492.hp1 NA19005.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0004 a0001c0001 a0001c0002 a0002c0004	a0001c0001t0002 a0001c0002t0006 a0002c0004t0001 a0001c0001t0002 a0001c0002t0006 a0002c0004t0001	a0001c0001t0002g0111 a0001c0002t0006g0041 a0002c0004t0001g0145 a0001c0001t0002g0111 a0001c0002t0006g0041 a0002c0004t0001g0145	3	174	0.0172	22	c.386 others(41): Show c.386-12440_386-12419dupACACACACACACACACACACAC	COL26A1	ENSG00000160963.14	transcript	ENST00000313669.12	protein_coding	3/12		INFO_REALIGN_3_PRIME	chr7	TogoVar
COL26A1_chr7_101357875_101564024	101520655	C C	CACACACC others(15): Show CACACACCACACACACACACACG	intron_variant intron_variant	MODIFIER	NA19054.hp1 NA19054.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0062 a0001c0001t0002g0062	1	174	0.0058	22	c.386 others(41): Show c.386-12421_386-12420insCACACACACACACACGACACAC	COL26A1	ENSG00000160963.14	transcript	ENST00000313669.12	protein_coding	3/12		INFO_REALIGN_3_PRIME	chr7	TogoVar
COL27A1_chr9_114150537_114317511	114253296	A A	AAAGAAAG others(15): Show AAAGAAAGAAAGAAAGAAGAAAG	intron_variant intron_variant	MODIFIER	NA19062.hp1 NA19062.hp1	a0006 a0006	a0006c0004 a0006c0004	a0006c0004t0005 a0006c0004t0005	a0006c0004t0005g0113 a0006c0004t0005g0113	1	308	0.0033	22	c.314 others(39): Show c.3141+381_3141+382insGAAAGAAGAAAGAAAGAAAGAA	COL27A1	ENSG00000196739.15	transcript	ENST00000356083.8	protein_coding	27/60		INFO_REALIGN_3_PRIME	chr9	TogoVar
COL2A1_chr12_47967967_48009476	48008121	G G	GAAAGAAA others(15): Show GAAAGAAAGAAAGGAAGAAAGAA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19005.hp1 NA19005.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0002 a0002c0001t0002	a0002c0001t0002g0015 a0002c0001t0002g0015	1	414	0.0024	22	c.-38 others(33): Show c.-3801_-3800insTTCTTTCTTCCTTTCTTTCTTT	COL2A1	ENSG00000139219.19	transcript	ENST00000380518.8	protein_coding		3646		chr12	TogoVar
COL4A1_chr13_110143963_110312157	110198078	G G	GGTGTGTG others(15): Show GGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0019 a0001c0001t0001g0019	1	344	0.0029	22	c.128 others(39): Show c.1285+367_1285+388dupACACACACACACACACACACAC	COL4A1	ENSG00000187498.16	transcript	ENST00000375820.10	protein_coding	21/51			chr13	TogoVar
COL4A1_chr13_110143963_110312157	110219682	A A	ATATATGT others(15): Show ATATATGTATATATGTATATATG	intron_variant intron_variant	MODIFIER	HG01346.hp2 HG03139.hp2 HG03209.hp2 others(1): Show HG01346.hp2 HG03139.hp2 HG03209.hp2 NA20300.hp1	a0001 a0002 a0001 a0002	a0001c0033 a0001c0051 a0002c0004 a0001c0033 a0001c0051 a0002c0004	a0001c0033t0001 a0001c0051t0001 a0002c0004t0001 a0001c0033t0001 a0001c0051t0001 a0002c0004t0001	a0001c0033t0001g0098 a0001c0033t0001g0099 a0001c0051t0001g0114 others(1): Show a0001c0033t0001g0098 a0001c0033t0001g0099 a0001c0051t0001g0114 a0002c0004t0001g0182	4	344	0.0116	22	c.145 others(39): Show c.145-5668_145-5667insCATATATACATATATACATATA	COL4A1	ENSG00000187498.16	transcript	ENST00000375820.10	protein_coding	2/51			chr13	TogoVar
COL4A1_chr13_110143963_110312157	110219688	A A	ATGTATAT others(15): Show ATGTATATATATGTATATATATG	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00558.hp1 HG00621.hp1 others(24): Show HG00280.hp2 HG00558.hp1 HG00621.hp1 HG00738.hp2 HG01074.hp2 HG01123.hp2 HG01167.hp1 HG01169.hp1 HG01256.hp2 HG01516.hp1 HG01952.hp2 HG01975.hp2 HG02004.hp2 HG02083.hp1 HG03225.hp1 NA18747.hp2 NA18953.hp1 NA18955.hp1 NA18957.hp2 NA18964.hp1 NA18968.hp1 NA18970.hp2 NA18981.hp2 NA18992.hp1 NA19009.hp1 NA19074.hp1 NA19079.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0006	a0001c0001 a0001c0003 a0001c0006 others(15): Show a0001c0001 a0001c0003 a0001c0006 a0001c0013 a0001c0052 a0001c0055 a0001c0056 a0001c0058 a0001c0066 a0002c0002 a0002c0011 a0002c0024 a0002c0093 a0002c0097 a0003c0012 a0003c0014 a0004c0071 a0006c0042	a0001c0001t0001 a0001c0001t0005 a0001c0003t0001 others(16): Show a0001c0001t0001 a0001c0001t0005 a0001c0003t0001 a0001c0006t0001 a0001c0013t0001 a0001c0052t0001 a0001c0055t0001 a0001c0056t0003 a0001c0058t0001 a0001c0066t0001 a0002c0002t0002 a0002c0011t0002 a0002c0024t0002 a0002c0093t0003 a0002c0097t0006 a0003c0012t0002 a0003c0014t0001 a0004c0071t0001 a0006c0042t0002	a0001c0001t0001g0044 a0001c0001t0001g0071 a0001c0001t0001g0129 others(24): Show a0001c0001t0001g0044 a0001c0001t0001g0071 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0005g0020 a0001c0003t0001g0059 a0001c0006t0001g0143 a0001c0006t0001g0147 a0001c0013t0001g0030 a0001c0052t0001g0149 a0001c0055t0001g0064 a0001c0056t0003g0126 a0001c0058t0001g0102 a0001c0066t0001g0151 a0002c0002t0002g0265 a0002c0002t0002g0269 a0002c0002t0002g0275 a0002c0002t0002g0320 a0002c0011t0002g0309 a0002c0011t0002g0310 a0002c0024t0002g0276 a0002c0093t0003g0217 a0002c0097t0006g0294 a0003c0012t0002g0279 a0003c0014t0001g0212 a0004c0071t0001g0084 a0006c0042t0002g0278	27	344	0.0785	22	c.145 others(39): Show c.145-5674_145-5673insCATATATATACATATATATACA	COL4A1	ENSG00000187498.16	transcript	ENST00000375820.10	protein_coding	2/51			chr13	TogoVar
COL4A1_chr13_110143963_110312157	110219688	A A	ATGTATAT others(15): Show ATGTATATATATGTGTATATATG	intron_variant intron_variant	MODIFIER	NA18952.hp2 NA18971.hp2 NA18972.hp2 NA18952.hp2 NA18971.hp2 NA18972.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0001c0019 a0004c0005 a0001c0001 a0001c0019 a0004c0005	a0001c0001t0001 a0001c0019t0001 a0004c0005t0001 a0001c0001t0001 a0001c0019t0001 a0004c0005t0001	a0001c0001t0001g0039 a0001c0019t0001g0066 a0004c0005t0001g0045 a0001c0001t0001g0039 a0001c0019t0001g0066 a0004c0005t0001g0045	3	344	0.0087	22	c.145 others(39): Show c.145-5674_145-5673insCATATATACACATATATATACA	COL4A1	ENSG00000187498.16	transcript	ENST00000375820.10	protein_coding	2/51			chr13	TogoVar
COL4A1_chr13_110143963_110312157	110219690	G G	GTATATAT others(15): Show GTATATATATGTATATATATGTA	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG01515.hp1 HG02129.hp1 others(13): Show HG00544.hp1 HG01515.hp1 HG02129.hp1 HG02165.hp2 HG02723.hp1 HG02896.hp1 HG02897.hp2 HG02922.hp1 HG03490.hp1 HG04184.hp1 NA18952.hp1 NA18953.hp2 NA18963.hp1 NA18972.hp1 NA18984.hp1 NA19074.hp2	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0011	a0001c0001 a0001c0003 a0001c0006 others(9): Show a0001c0001 a0001c0003 a0001c0006 a0001c0013 a0001c0079 a0002c0002 a0002c0011 a0002c0018 a0002c0048 a0002c0112 a0004c0005 a0011c0087	a0001c0001t0001 a0001c0003t0001 a0001c0006t0001 others(10): Show a0001c0001t0001 a0001c0003t0001 a0001c0006t0001 a0001c0013t0001 a0001c0079t0001 a0002c0002t0002 a0002c0002t0003 a0002c0011t0001 a0002c0018t0001 a0002c0048t0001 a0002c0112t0002 a0004c0005t0001 a0011c0087t0011	a0001c0001t0001g0011 a0001c0001t0001g0040 a0001c0003t0001g0088 others(13): Show a0001c0001t0001g0011 a0001c0001t0001g0040 a0001c0003t0001g0088 a0001c0006t0001g0025 a0001c0006t0001g0163 a0001c0013t0001g0122 a0001c0079t0001g0121 a0002c0002t0002g0297 a0002c0002t0003g0195 a0002c0011t0001g0216 a0002c0018t0001g0234 a0002c0048t0001g0186 a0002c0048t0001g0187 a0002c0112t0002g0273 a0004c0005t0001g0003 a0011c0087t0011g0289	16	344	0.0465	22	c.145 others(39): Show c.145-5676_145-5675insTACATATATATACATATATATA	COL4A1	ENSG00000187498.16	transcript	ENST00000375820.10	protein_coding	2/51			chr13	TogoVar
COL4A1_chr13_110143963_110312157	110252675	A A	AATATGTA others(15): Show AATATGTATATATACATATAATT	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG03209.hp2 HG03453.hp1 others(1): Show HG02976.hp1 HG03209.hp2 HG03453.hp1 NA19030.hp1	a0001 a0002 a0001 a0002	a0001c0010 a0001c0051 a0002c0004 a0001c0010 a0001c0051 a0002c0004	a0001c0010t0001 a0001c0051t0001 a0002c0004t0001 others(1): Show a0001c0010t0001 a0001c0051t0001 a0002c0004t0001 a0002c0004t0007	a0001c0010t0001g0113 a0001c0051t0001g0114 a0002c0004t0001g0193 others(1): Show a0001c0010t0001g0113 a0001c0051t0001g0114 a0002c0004t0001g0193 a0002c0004t0007g0174	4	344	0.0116	22	c.85- others(37): Show c.85-9963_85-9942dupAATTATATGTATATATACATAT	COL4A1	ENSG00000187498.16	transcript	ENST00000375820.10	protein_coding	1/51			chr13	TogoVar
COL4A2_chr13_110302284_110518209	110509245	T T	TTATATAT others(15): Show TTATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA18612.hp1 NA18961.hp2 NA18612.hp1 NA18961.hp2	a0001 a0001	a0001c0003 a0001c0005 a0001c0003 a0001c0005	a0001c0003t0001 a0001c0005t0002 a0001c0003t0001 a0001c0005t0002	a0001c0003t0001g0165 a0001c0005t0002g0297 a0001c0003t0001g0165 a0001c0005t0002g0297	2	372	0.0054	22	c.488 others(41): Show c.4881+1029_4881+1050dupTATATATATATATATATATATA	COL4A2	ENSG00000134871.19	transcript	ENST00000360467.7	protein_coding	47/47		INFO_REALIGN_3_PRIME	chr13	TogoVar
COL4A2_chr13_110302284_110518209	110509270	T T	TATATATA others(15): Show TATATATATATATATACACACAC	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0003 a0003	a0003c0067 a0003c0067	a0003c0067t0050 a0003c0067t0050	a0003c0067t0050g0151 a0003c0067t0050g0151	1	372	0.0027	22	c.488 others(41): Show c.4881+1050_4881+1051insTATATATATATATACACACACA	COL4A2	ENSG00000134871.19	transcript	ENST00000360467.7	protein_coding	47/47		INFO_REALIGN_3_PRIME	chr13	TogoVar
COL4A3_chr2_227159624_227319792	227202747	A A	AATATATA others(15): Show AATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA20752.hp1 NA20752.hp1	a0003 a0003	a0003c0002 a0003c0002	a0003c0002t0003 a0003c0002t0003	a0003c0002t0003g0107 a0003c0002t0003g0107	1	344	0.0029	22	c.88- others(39): Show c.88-35221_88-35220insATATATATATATATATATATAT	COL4A3	ENSG00000169031.21	transcript	ENST00000396578.8	protein_coding	1/51			chr2	TogoVar
COL4A3_chr2_227159624_227319792	227203196	C C	CACATATA others(15): Show CACATATATGTGTATATATGTGT	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01361.hp1 HG01516.hp1 others(7): Show HG01099.hp2 HG01361.hp1 HG01516.hp1 HG01943.hp1 HG02258.hp2 HG02523.hp1 HG03017.hp2 HG03927.hp2 NA18971.hp2 NA19010.hp2	a0001 a0005 a0017 a0001 a0005 a0017	a0001c0001 a0005c0005 a0017c0019 a0001c0001 a0005c0005 a0017c0019	a0001c0001t0002 a0005c0005t0001 a0005c0005t0007 others(1): Show a0001c0001t0002 a0005c0005t0001 a0005c0005t0007 a0017c0019t0019	a0001c0001t0002g0344 a0005c0005t0001g0176 a0005c0005t0001g0177 others(7): Show a0001c0001t0002g0344 a0005c0005t0001g0176 a0005c0005t0001g0177 a0005c0005t0001g0243 a0005c0005t0007g0114 a0005c0005t0007g0162 a0005c0005t0007g0215 a0005c0005t0007g0280 a0005c0005t0007g0298 a0017c0019t0019g0178	10	344	0.0291	22	c.88- others(39): Show c.88-34771_88-34770insCATATATGTGTATATATGTGTA	COL4A3	ENSG00000169031.21	transcript	ENST00000396578.8	protein_coding	1/51		INFO_REALIGN_3_PRIME	chr2	TogoVar
COL4A3_chr2_227159624_227319792	227203316	C C	CACATATA others(15): Show CACATATATGTGTATATATGTGT	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG03098.hp2 HG02630.hp1 HG03098.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0011 a0001c0001 a0003c0011	a0001c0001t0002 a0003c0011t0001 a0001c0001t0002 a0003c0011t0001	a0001c0001t0002g0266 a0003c0011t0001g0090 a0001c0001t0002g0266 a0003c0011t0001g0090	2	344	0.0058	22	c.88- others(39): Show c.88-34651_88-34650insCATATATGTGTATATATGTGTA	COL4A3	ENSG00000169031.21	transcript	ENST00000396578.8	protein_coding	1/51		INFO_REALIGN_3_PRIME	chr2	TogoVar
COL4A3_chr2_227159624_227319792	227203317	A A	ACACATAT others(15): Show ACACATATGTGTATATATGTGTG	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0020 a0020	a0020c0050 a0020c0050	a0020c0050t0011 a0020c0050t0011	a0020c0050t0011g0061 a0020c0050t0011g0061	1	344	0.0029	22	c.88- others(39): Show c.88-34651_88-34650insCACATATGTGTATATATGTGTG	COL4A3	ENSG00000169031.21	transcript	ENST00000396578.8	protein_coding	1/51			chr2	TogoVar
COL4A3_chr2_227159624_227319792	227203363	A A	ACACATAT others(15): Show ACACATATGTGTATATATGTGTG	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG03098.hp2 HG02630.hp1 HG03098.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0011 a0001c0001 a0003c0011	a0001c0001t0002 a0003c0011t0001 a0001c0001t0002 a0003c0011t0001	a0001c0001t0002g0266 a0003c0011t0001g0090 a0001c0001t0002g0266 a0003c0011t0001g0090	2	344	0.0058	22	c.88- others(39): Show c.88-34605_88-34604insCACATATGTGTATATATGTGTG	COL4A3	ENSG00000169031.21	transcript	ENST00000396578.8	protein_coding	1/51			chr2	TogoVar
COL4A3_chr2_227159624_227319792	227203763	A A	ATGTGTAT others(15): Show ATGTGTATATATACATATATGTG	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG01167.hp2 HG01169.hp1 others(14): Show HG00609.hp2 HG01167.hp2 HG01169.hp1 HG01433.hp2 HG02015.hp1 HG02129.hp2 HG02523.hp2 HG03209.hp1 NA18962.hp1 NA18979.hp2 NA18992.hp2 NA19010.hp1 NA19030.hp1 NA19077.hp1 NA19085.hp2 NA19091.hp1 NA19240.hp1	a0001 a0003 a0004 others(3): Show a0001 a0003 a0004 a0006 a0007 a0009	a0001c0001 a0003c0002 a0004c0003 others(5): Show a0001c0001 a0003c0002 a0004c0003 a0006c0010 a0006c0016 a0006c0031 a0007c0006 a0009c0008	a0001c0001t0001 a0001c0001t0002 a0003c0002t0003 others(6): Show a0001c0001t0001 a0001c0001t0002 a0003c0002t0003 a0004c0003t0004 a0006c0010t0006 a0006c0016t0006 a0006c0031t0006 a0007c0006t0005 a0009c0008t0001	a0001c0001t0001g0119 a0001c0001t0001g0219 a0001c0001t0001g0284 others(14): Show a0001c0001t0001g0119 a0001c0001t0001g0219 a0001c0001t0001g0284 a0001c0001t0002g0307 a0003c0002t0003g0088 a0004c0003t0004g0201 a0006c0010t0006g0113 a0006c0016t0006g0267 a0006c0031t0006g0081 a0007c0006t0005g0149 a0007c0006t0005g0169 a0007c0006t0005g0200 a0007c0006t0005g0283 a0007c0006t0005g0297 a0007c0006t0005g0306 a0009c0008t0001g0211 a0009c0008t0001g0270	17	344	0.0494	22	c.88- others(39): Show c.88-34201_88-34180dupGTATATATACATATATGTGTGT	COL4A3	ENSG00000169031.21	transcript	ENST00000396578.8	protein_coding	1/51		INFO_REALIGN_3_PRIME	chr2	TogoVar
COL4A3_chr2_227159624_227319792	227218080	C C	CTATATAT others(15): Show CTATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp1	a0003 a0003	a0003c0002 a0003c0002	a0003c0002t0003 a0003c0002t0003	a0003c0002t0003g0312 a0003c0002t0003g0312	1	344	0.0029	22	c.88- others(39): Show c.88-19887_88-19866dupTATATATATATATATATATATA	COL4A3	ENSG00000169031.21	transcript	ENST00000396578.8	protein_coding	1/51		INFO_REALIGN_3_PRIME	chr2	TogoVar
COL4A3_chr2_227159624_227319792	227249230	A A	ATATATAT others(15): Show ATATATATATATATATATATATT	intron_variant intron_variant	MODIFIER	HG02129.hp1 HG02129.hp1	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0009 a0005c0005t0009	a0005c0005t0009g0116 a0005c0005t0009g0116	1	344	0.0029	22	c.546 others(37): Show c.546+711_546+712insATATATATATATATATATATTT	COL4A3	ENSG00000169031.21	transcript	ENST00000396578.8	protein_coding	9/51		INFO_REALIGN_3_PRIME	chr2	TogoVar
COL4A3_chr2_227159624_227319792	227249230	A A	ATATATAT others(15): Show ATATATATATATATATATTTTTT	intron_variant intron_variant	MODIFIER	NA19086.hp1 NA19086.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0152 a0001c0001t0001g0152	1	344	0.0029	22	c.546 others(37): Show c.546+711_546+712insATATATATATATATATTTTTTT	COL4A3	ENSG00000169031.21	transcript	ENST00000396578.8	protein_coding	9/51		INFO_REALIGN_3_PRIME	chr2	TogoVar
COL4A3_chr2_227159624_227319792	227249230	A A	ATATATAT others(15): Show ATATATATATTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0048 a0001c0001t0016g0048	1	344	0.0029	22	c.546 others(37): Show c.546+711_546+712insATATATATTTTTTTTTTTTTTT	COL4A3	ENSG00000169031.21	transcript	ENST00000396578.8	protein_coding	9/51		INFO_REALIGN_3_PRIME	chr2	TogoVar
COL4A3_chr2_227159624_227319792	227249230	A A	ATATATAT others(15): Show ATATATATTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0006 a0006	a0006c0010 a0006c0010	a0006c0010t0003 a0006c0010t0003	a0006c0010t0003g0245 a0006c0010t0003g0245	1	344	0.0029	22	c.546 others(37): Show c.546+711_546+712insATATATTTTTTTTTTTTTTTTT	COL4A3	ENSG00000169031.21	transcript	ENST00000396578.8	protein_coding	9/51		INFO_REALIGN_3_PRIME	chr2	TogoVar
COL4A3_chr2_227159624_227319792	227274260	A A	AATAAATA others(15): Show AATAAATAAATAAATAAATAAAT	intron_variant intron_variant	MODIFIER	HG02129.hp1 HG02129.hp1	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0009 a0005c0005t0009	a0005c0005t0009g0116 a0005c0005t0009g0116	1	344	0.0029	22	c.192 others(41): Show c.1927+1157_1927+1158insAAATAAATATAAATAAATAAAT	COL4A3	ENSG00000169031.21	transcript	ENST00000396578.8	protein_coding	26/51		INFO_REALIGN_3_PRIME	chr2	TogoVar
COL4A3_chr2_227159624_227319792	227302677	C C	CAAAAAAA others(15): Show CAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG01981.hp2 NA18994.hp2 HG01496.hp2 HG01981.hp2 NA18994.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0026 a0001c0001t0001g0035 a0001c0001t0001g0205 a0001c0001t0001g0026 a0001c0001t0001g0035 a0001c0001t0001g0205	3	344	0.0087	22	c.388 others(39): Show c.3883-353_3883-332dupAAAAAAAAAAAAAAAAAAAAAA	COL4A3	ENSG00000169031.21	transcript	ENST00000396578.8	protein_coding	43/51		INFO_REALIGN_3_PRIME	chr2	TogoVar
COL4A4_chr2_226997714_227169205	227041838	A A	AAGAGAGA others(15): Show AAGAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG01071.hp1 HG01071.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0117 a0001c0001t0001g0117	1	284	0.0035	22	c.350 others(39): Show c.3505+309_3505+310insCTCTCTCTCTCTCTCTCTCTCT	COL4A4	ENSG00000081052.14	transcript	ENST00000396625.5	protein_coding	37/47			chr2	TogoVar
COL4A4_chr2_226997714_227169205	227041848	G G	GAGAAAGA others(15): Show GAGAAAGAAAGAGAAAGAAAGAA	intron_variant intron_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0005 a0005	a0005c0045 a0005c0045	a0005c0045t0003 a0005c0045t0003	a0005c0045t0003g0061 a0005c0045t0003g0061	1	284	0.0035	22	c.350 others(39): Show c.3505+299_3505+300insTTCTTTCTTTCTCTTTCTTTCT	COL4A4	ENSG00000081052.14	transcript	ENST00000396625.5	protein_coding	37/47			chr2	TogoVar
COL4A4_chr2_226997714_227169205	227041848	G G	GAGAGAGA others(15): Show GAGAGAGAGAGAGAGAGAAAGAA	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0194 a0001c0001t0001g0194	1	284	0.0035	22	c.350 others(39): Show c.3505+299_3505+300insTTCTTTCTCTCTCTCTCTCTCT	COL4A4	ENSG00000081052.14	transcript	ENST00000396625.5	protein_coding	37/47			chr2	TogoVar
COL4A4_chr2_226997714_227169205	227045929	A A	ATATATGT others(15): Show ATATATGTATATATGTATATATG	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02818.hp1 NA18906.hp1 others(1): Show HG02451.hp1 HG02818.hp1 NA18906.hp1 NA21309.hp1	a0020 a0035 a0036 a0020 a0035 a0036	a0020c0041 a0020c0054 a0035c0037 others(1): Show a0020c0041 a0020c0054 a0035c0037 a0036c0055	a0020c0041t0010 a0020c0054t0010 a0035c0037t0016 others(1): Show a0020c0041t0010 a0020c0054t0010 a0035c0037t0016 a0036c0055t0029	a0020c0041t0010g0028 a0020c0054t0010g0020 a0035c0037t0016g0003 others(1): Show a0020c0041t0010g0028 a0020c0054t0010g0020 a0035c0037t0016g0003 a0036c0055t0029g0174	4	284	0.0141	22	c.328 others(41): Show c.3289+1524_3289+1545dupCATATATACATATATACATATA	COL4A4	ENSG00000081052.14	transcript	ENST00000396625.5	protein_coding	35/47			chr2	TogoVar

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