Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
PRAMEF14_chr1_13336892_13352134	13349221	A A	AAAGAAAG others(16): Show AAAGAAAGAAAGAAAGAAAGAAAG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18962.hp1 NA18962.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0006 a0002c0002t0001g0006	1	256	0.0039	23	c.-21 others(34): Show c.-2191_-2190insCTTTCTTTCTTTCTTTCTTTCTT	PRAMEF14	ENSG00000204481.8	transcript	ENST00000334600.7	protein_coding		2088		chr1	TogoVar
PRAMEF14_chr1_13336892_13352134	13349244	G G	GAGAAAGA others(16): Show GAGAAAGAAAGAAAGAAAGAAAGA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01952.hp1 HG01952.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0003 a0001c0001t0002g0003	1	256	0.0039	23	c.-22 others(34): Show c.-2214_-2213insTCTTTCTTTCTTTCTTTCTTTCT	PRAMEF14	ENSG00000204481.8	transcript	ENST00000334600.7	protein_coding		2111		chr1	TogoVar
PRAMEF14_chr1_13336892_13352134	13349251	A A	AGAAAAAG others(16): Show AGAAAAAGAAAGAAAGAAAGAAAG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18991.hp2 NA18991.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0006 a0002c0002t0001g0006	1	256	0.0039	23	c.-22 others(34): Show c.-2221_-2220insCTTTCTTTCTTTCTTTCTTTTTC	PRAMEF14	ENSG00000204481.8	transcript	ENST00000334600.7	protein_coding		2118		chr1	TogoVar
PRAMEF14_chr1_13336892_13352134	13349272	A A	AAAGAAAG others(16): Show AAAGAAAGAAAGAAAGAAGAAAGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0005 a0002c0002t0001g0005	1	256	0.0039	23	c.-22 others(34): Show c.-2242_-2241insCCTTTCTTCTTTCTTTCTTTCTT	PRAMEF14	ENSG00000204481.8	transcript	ENST00000334600.7	protein_coding		2139		chr1	TogoVar
PRCC_chr1_156762535_156805815	156779129	T T	TATATATA others(16): Show TATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG06807.hp2 HG02965.hp1 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0315 a0001c0001t0001g0333 a0001c0001t0001g0315 a0001c0001t0001g0333	2	350	0.0057	23	c.469 others(40): Show c.469-3153_469-3152insATATATATATATATATATATATA	PRCC	ENSG00000143294.15	transcript	ENST00000271526.9	protein_coding	1/6			chr1	TogoVar
PRCC_chr1_156762535_156805815	156787650	C C	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02145.hp1 HG02647.hp1 others(3): Show HG01891.hp1 HG02145.hp1 HG02647.hp1 HG03209.hp1 HG03225.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0280 a0001c0001t0001g0283 a0001c0001t0001g0288 others(3): Show a0001c0001t0001g0280 a0001c0001t0001g0283 a0001c0001t0001g0288 a0001c0001t0001g0289 a0001c0001t0001g0290 a0001c0001t0001g0299	6	350	0.0171	23	c.108 others(40): Show c.1083+492_1083+493insTTTTTTTTTTTTTTTTTTTTTTT	PRCC	ENSG00000143294.15	transcript	ENST00000271526.9	protein_coding	3/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
PRCC_chr1_156762535_156805815	156792053	C C	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00408.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0013 a0001c0001t0001g0013	1	350	0.0029	23	c.117 others(40): Show c.1179+267_1179+289dupTTTTTTTTTTTTTTTTTTTTTTT	PRCC	ENSG00000143294.15	transcript	ENST00000271526.9	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
PRDM10_chr11_129894711_130007835	129963382	G G	GAAGAGAG others(16): Show GAAGAGAGAAGAGAAGAGAAGAGA	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00735.hp2	a0001 a0001	a0001c0012 a0001c0012	a0001c0012t0004 a0001c0012t0004	a0001c0012t0004g0145 a0001c0012t0004g0145	1	326	0.0031	23	c.-11 others(42): Show c.-118-2301_-118-2300insTCTCTTCTCTTCTCTTCTCTCTT	PRDM10	ENSG00000170325.16	transcript	ENST00000360871.8	protein_coding	1/20			chr11	TogoVar
PRDM10_chr11_129894711_130007835	129963382	G G	GAGAAGAG others(16): Show GAGAAGAGAAGAGAAGAGAAGAGA	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01175.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0002 a0002c0001t0002	a0002c0001t0002g0172 a0002c0001t0002g0172	1	326	0.0031	23	c.-11 others(42): Show c.-118-2301_-118-2300insTCTCTTCTCTTCTCTTCTCTTCT	PRDM10	ENSG00000170325.16	transcript	ENST00000360871.8	protein_coding	1/20			chr11	TogoVar
PRDM12_chr9_130659594_130687983	130680634	A A	ATATATAT others(16): Show ATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG04199.hp1 NA18961.hp2 NA18997.hp2 others(1): Show HG04199.hp1 NA18961.hp2 NA18997.hp2 NA19064.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0093 a0001c0002t0002g0098 a0001c0002t0002g0105 others(1): Show a0001c0002t0002g0093 a0001c0002t0002g0098 a0001c0002t0002g0105 a0001c0002t0002g0141	4	392	0.0102	23	c.683 others(38): Show c.683-614_683-613insTATATATATATATATATATATAT	PRDM12	ENSG00000130711.5	transcript	ENST00000253008.3	protein_coding	4/4			chr9	TogoVar
PRDM12_chr9_130659594_130687983	130680659	A A	ATATATAT others(16): Show ATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02165.hp1 HG02165.hp1	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0002 a0001c0009t0002	a0001c0009t0002g0176 a0001c0009t0002g0176	1	392	0.0026	23	c.683 others(38): Show c.683-588_683-587insATATATATATATATATATATATT	PRDM12	ENSG00000130711.5	transcript	ENST00000253008.3	protein_coding	4/4		INFO_REALIGN_3_PRIME	chr9	TogoVar
PRDM16_chr1_3064203_3443621	3409834	G G	GGTGTGTG others(16): Show GGTGTGTGGTGTGTGTATGTGCGT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00735.hp1 HG00741.hp1 others(69): Show HG00280.hp1 HG00735.hp1 HG00741.hp1 HG00741.hp2 HG01106.hp1 HG01109.hp2 HG01123.hp2 HG01243.hp1 HG01243.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG02004.hp2 HG02055.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02300.hp2 HG02572.hp1 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02647.hp2 HG02698.hp2 HG02717.hp2 HG02723.hp2 HG02735.hp1 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp2 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03540.hp1 HG03540.hp2 HG03579.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18906.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA20300.hp1 NA20300.hp2 NA21309.hp2	a0001 a0002 a0006 others(1): Show a0001 a0002 a0006 a0007	a0001c0001 a0001c0004 a0001c0006 others(9): Show a0001c0001 a0001c0004 a0001c0006 a0001c0012 a0001c0016 a0001c0022 a0001c0025 a0002c0003 a0002c0007 a0002c0015 a0006c0023 a0007c0024	a0001c0001t0001 a0001c0001t0004 a0001c0001t0007 others(48): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0007 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0020 a0001c0001t0022 a0001c0001t0023 a0001c0001t0028 a0001c0001t0042 a0001c0001t0045 a0001c0001t0046 a0001c0001t0056 a0001c0001t0077 a0001c0001t0083 a0001c0004t0004 a0001c0004t0007 a0001c0004t0010 a0001c0004t0025 a0001c0004t0029 a0001c0004t0055 a0001c0004t0063 a0001c0004t0073 a0001c0004t0081 a0001c0006t0011 a0001c0006t0013 a0001c0006t0024 a0001c0006t0039 a0001c0012t0009 a0001c0016t0020 a0001c0022t0057 a0001c0025t0044 a0002c0003t0001 a0002c0003t0002 a0002c0003t0004 a0002c0003t0006 a0002c0003t0007 a0002c0003t0009 a0002c0003t0013 a0002c0003t0029 a0002c0003t0059 a0002c0003t0075 a0002c0007t0001 a0002c0007t0002 a0002c0007t0019 a0002c0007t0024 a0002c0015t0014 a0006c0023t0025 a0007c0024t0007	a0001c0001t0001g0006 a0001c0001t0001g0029 a0001c0001t0001g0125 others(69): Show a0001c0001t0001g0006 a0001c0001t0001g0029 a0001c0001t0001g0125 a0001c0001t0001g0201 a0001c0001t0001g0203 a0001c0001t0004g0046 a0001c0001t0007g0054 a0001c0001t0011g0022 a0001c0001t0011g0047 a0001c0001t0012g0041 a0001c0001t0012g0129 a0001c0001t0013g0002 a0001c0001t0014g0132 a0001c0001t0020g0105 a0001c0001t0022g0040 a0001c0001t0022g0061 a0001c0001t0023g0072 a0001c0001t0028g0111 a0001c0001t0028g0126 a0001c0001t0042g0124 a0001c0001t0045g0024 a0001c0001t0046g0042 a0001c0001t0056g0204 a0001c0001t0077g0036 a0001c0001t0083g0027 a0001c0004t0004g0051 a0001c0004t0007g0038 a0001c0004t0007g0063 a0001c0004t0007g0071 a0001c0004t0010g0032 a0001c0004t0010g0034 a0001c0004t0010g0130 a0001c0004t0010g0174 a0001c0004t0025g0205 a0001c0004t0029g0044 a0001c0004t0055g0004 a0001c0004t0063g0016 a0001c0004t0073g0143 a0001c0004t0081g0031 a0001c0006t0011g0039 a0001c0006t0011g0065 a0001c0006t0013g0133 a0001c0006t0024g0026 a0001c0006t0039g0140 a0001c0012t0009g0113 a0001c0012t0009g0193 a0001c0016t0020g0108 a0001c0022t0057g0139 a0001c0025t0044g0109 a0002c0003t0001g0018 a0002c0003t0001g0107 a0002c0003t0001g0142 a0002c0003t0002g0102 a0002c0003t0004g0048 a0002c0003t0004g0068 a0002c0003t0004g0123 a0002c0003t0004g0127 a0002c0003t0004g0128 a0002c0003t0006g0066 a0002c0003t0007g0103 a0002c0003t0009g0078 a0002c0003t0013g0137 a0002c0003t0029g0106 a0002c0003t0059g0037 a0002c0003t0075g0084 a0002c0007t0001g0001 a0002c0007t0002g0045 a0002c0007t0019g0020 a0002c0007t0024g0070 a0002c0015t0014g0073 a0006c0023t0025g0007 a0007c0024t0007g0173	72	210	0.3429	23	c.118 others(42): Show c.1187-1538_1187-1537insTGTATGTGCGTGTGTGTGGTGTG	PRDM16	ENSG00000142611.17	transcript	ENST00000270722.10	protein_coding	8/16		INFO_REALIGN_3_PRIME	chr1	TogoVar
PRDM5_chr4_120686915_120927726	120872150	C C	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01358.hp2 NA19062.hp2 HG01358.hp2 NA19062.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0129 a0001c0001t0001g0290 a0001c0001t0001g0129 a0001c0001t0001g0290	2	298	0.0067	23	c.178 others(42): Show c.178-18633_178-18611dupTTTTTTTTTTTTTTTTTTTTTTT	PRDM5	ENSG00000138738.11	transcript	ENST00000264808.8	protein_coding	2/15			chr4	TogoVar
PRDX1_chr1_45506051_45526884	45515598	C C	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02027.hp1 HG02027.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0064 a0001c0001t0001g0064	1	364	0.0028	23	c.260 others(36): Show c.260+33_260+55dupTTTTTTTTTTTTTTTTTTTTTTT	PRDX1	ENSG00000117450.15	transcript	ENST00000319248.13	protein_coding	3/5			chr1	TogoVar
PRDX4_chrX_23662493_23691397	23665838	A A	AAAAAAAA others(16): Show AAAAAAAAAAAAAAAAAAAAACAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp1 HG00558.hp1 HG00558.hp2 others(27): Show HG00323.hp1 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00735.hp1 HG00741.hp1 HG01070.hp1 HG01071.hp1 HG01515.hp1 HG02486.hp1 HG02523.hp1 HG03516.hp1 HG03669.hp2 NA18940.hp1 NA18942.hp1 NA18943.hp1 NA18946.hp1 NA18957.hp2 NA18970.hp1 NA18980.hp1 NA18989.hp1 NA18997.hp1 NA19010.hp2 NA19012.hp1 NA19070.hp1 NA19074.hp2 NA19078.hp2 NA19086.hp1 NA19087.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(21): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0011 a0001c0001t0001g0013 a0001c0001t0001g0026 a0001c0001t0001g0039 a0001c0001t0001g0045 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0052 a0001c0001t0001g0057 a0001c0001t0001g0060 a0001c0001t0001g0066 a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0001g0087 a0001c0001t0001g0095 a0001c0001t0001g0098 a0001c0001t0001g0109 a0001c0001t0001g0115 a0001c0001t0001g0170 a0001c0001t0001g0183	30	349	0.0860	23	c.-17 others(34): Show c.-1733_-1732insAAAAAAAAAAAAAAAAAAAACAG	PRDX4	ENSG00000123131.13	transcript	ENST00000379341.9	protein_coding		1654		chrX	TogoVar
PRELID3A_chr18_12402929_12437234	12405848	A A	AAAGAAAG others(16): Show AAAGAAAGAAAGAAAGAAAGAAAG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18969.hp2 NA18969.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0136 a0001c0001t0001g0136	1	394	0.0025	23	c.-21 others(34): Show c.-2128_-2127insAAGAAAGAAAGAAAGAAAGAAAG	PRELID3A	ENSG00000141391.14	transcript	ENST00000440960.6	protein_coding		2080		chr18	TogoVar
PREX1_chr20_48619252_48832999	48661444	A A	AAAAAAAA others(16): Show AAAAAAAAAAATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18960.hp2 NA18960.hp2	a0004 a0004	a0004c0007 a0004c0007	a0004c0007t0001 a0004c0007t0001	a0004c0007t0001g0221 a0004c0007t0001g0221	1	268	0.0037	23	c.173 others(42): Show c.1739-1384_1739-1383insATATATATATATATTTTTTTTTT	PREX1	ENSG00000124126.14	transcript	ENST00000371941.4	protein_coding	15/39			chr20	TogoVar
PREX1_chr20_48619252_48832999	48661444	A A	AAAAAAAT others(16): Show AAAAAAATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG04115.hp2 HG04115.hp2	a0012 a0012	a0012c0038 a0012c0038	a0012c0038t0001 a0012c0038t0001	a0012c0038t0001g0192 a0012c0038t0001g0192	1	268	0.0037	23	c.173 others(42): Show c.1739-1384_1739-1383insATATATATATATATATATTTTTT	PREX1	ENSG00000124126.14	transcript	ENST00000371941.4	protein_coding	15/39			chr20	TogoVar
PRF1_chr10_70592348_70607741	70601840	A A	AAAAAAAA others(16): Show AAAAAAAAGAGAAAGAAAAAAAAG	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02895.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0045 a0001c0001t0005g0045	1	442	0.0023	23	c.-31 others(38): Show c.-31+804_-31+805insCTTTTTTTTCTTTCTCTTTTTTT	PRF1	ENSG00000180644.8	transcript	ENST00000441259.2	protein_coding	1/2			chr10	TogoVar
PRG4_chr1_186291279_186319567	186311829	T T	TTTCTGGT others(16): Show TTTCTGGTCAGCTGATAGAAGTCA	intron_variant intron_variant	MODIFIER	NA18961.hp1 NA18961.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0104 a0001c0001t0001g0104	1	428	0.0023	23	c.379 others(40): Show c.3793+235_3793+236insCTGGTCAGCTGATAGAAGTCATT	PRG4	ENSG00000116690.13	transcript	ENST00000445192.7	protein_coding	10/12		INFO_REALIGN_3_PRIME	chr1	TogoVar
PRIM2_chr6_57312630_57651850	57418383	G G	GGTTTTTT others(16): Show GGTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0235 a0001c0001t0002g0235	1	300	0.0033	23	c.693 others(42): Show c.693+36215_693+36216insGTTTTTTTTTTTTTTTTTTTTTT	PRIM2	ENSG00000146143.19	transcript	ENST00000615550.5	protein_coding	7/13			chr6	TogoVar
PRIM2_chr6_57312630_57651850	57446418	C C	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG02071.hp2 NA18944.hp1 others(1): Show HG00423.hp1 HG02071.hp2 NA18944.hp1 NA19084.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0002 a0001c0001t0003	a0001c0001t0002g0141 a0001c0001t0002g0144 a0001c0001t0003g0193 others(1): Show a0001c0001t0002g0141 a0001c0001t0002g0144 a0001c0001t0003g0193 a0001c0001t0003g0195	4	300	0.0133	23	c.694 others(42): Show c.694-60954_694-60953insTTTTTTTTTTTTTTTTTTTTTTT	PRIM2	ENSG00000146143.19	transcript	ENST00000615550.5	protein_coding	7/13		INFO_REALIGN_3_PRIME	chr6	TogoVar
PRIM2_chr6_57312630_57651850	57542939	A A	ATTTTTTT others(16): Show ATTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03490.hp2 HG03490.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0168 a0001c0001t0002g0168	1	300	0.0033	23	c.102 others(42): Show c.1020+5333_1020+5334insTTTTTTTTTTTTTTTTTTTTTTT	PRIM2	ENSG00000146143.19	transcript	ENST00000615550.5	protein_coding	10/13		INFO_REALIGN_3_PRIME	chr6	TogoVar
PRIMPOL_chr4_184644738_184699952	184651290	C C	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02970.hp1 HG03130.hp2 NA18906.hp1 HG02970.hp1 HG03130.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0059 a0001c0001t0003g0060 a0001c0001t0003g0061 a0001c0001t0003g0059 a0001c0001t0003g0060 a0001c0001t0003g0061	3	328	0.0092	23	c.-13 others(40): Show c.-137-725_-137-724insAAAAAAAAAAAAAAAAAAAAAAA	PRIMPOL	ENSG00000164306.11	transcript	ENST00000314970.11	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr4	TogoVar
PRKAA2_chr1_56640314_56720335	56655280	A A	ATATATAT others(16): Show ATATATATATATATATATTTTTTT	intron_variant intron_variant	MODIFIER	HG02602.hp1 HG02602.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0069 a0001c0002t0069	a0001c0002t0069g0041 a0001c0002t0069g0041	1	412	0.0024	23	c.94+ others(38): Show c.94+9800_94+9801insATATATATATATATATTTTTTTT	PRKAA2	ENSG00000162409.12	transcript	ENST00000371244.9	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr1	TogoVar
PRKAA2_chr1_56640314_56720335	56655280	A A	ATATATAT others(16): Show ATATATATATATATTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG02165.hp2 NA19004.hp2 HG00544.hp2 HG02165.hp2 NA19004.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0039 a0001c0002t0076 a0001c0002t0039 a0001c0002t0076	a0001c0002t0039g0121 a0001c0002t0039g0122 a0001c0002t0076g0123 a0001c0002t0039g0121 a0001c0002t0039g0122 a0001c0002t0076g0123	3	412	0.0073	23	c.94+ others(38): Show c.94+9800_94+9801insATATATATATATTTTTTTTTTTT	PRKAA2	ENSG00000162409.12	transcript	ENST00000371244.9	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr1	TogoVar
PRKAA2_chr1_56640314_56720335	56655280	A A	ATATATAT others(16): Show ATATATATATATTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19002.hp1 NA19002.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0040 a0001c0002t0040	a0001c0002t0040g0125 a0001c0002t0040g0125	1	412	0.0024	23	c.94+ others(38): Show c.94+9800_94+9801insATATATATATTTTTTTTTTTTTT	PRKAA2	ENSG00000162409.12	transcript	ENST00000371244.9	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr1	TogoVar
PRKAA2_chr1_56640314_56720335	56697012	A A	ATTTTTTT others(16): Show ATTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG03540.hp2 HG01109.hp1 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0060 a0001c0001t0107 a0001c0001t0060 a0001c0001t0107	a0001c0001t0060g0303 a0001c0001t0107g0356 a0001c0001t0060g0303 a0001c0001t0107g0356	2	412	0.0049	23	c.788 others(38): Show c.788+868_788+869insTTTTTTTTTTTTTTTTTTTTTTT	PRKAA2	ENSG00000162409.12	transcript	ENST00000371244.9	protein_coding	6/8		INFO_REALIGN_3_PRIME	chr1	TogoVar
PRKCB_chr16_23830983_24225611	24182902	T T	TGTGTGTG others(16): Show TGTGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG00738.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0018 a0001c0002t0018	a0001c0002t0018g0002 a0001c0002t0018g0002	1	148	0.0068	23	c.153 others(42): Show c.1533+1974_1533+1975insGTGTGTGTGTGTGTGTGTGTGTG	PRKCB	ENSG00000166501.14	transcript	ENST00000643927.1	protein_coding	13/16			chr16	TogoVar
PRKCE_chr2_45646675_46192990	45751809	A A	ATTTTTTT others(16): Show ATTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00280.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0007 a0001c0001t0001g0007	1	168	0.0060	23	c.349 others(42): Show c.349-91187_349-91165dupTTTTTTTTTTTTTTTTTTTTTTT	PRKCE	ENSG00000171132.14	transcript	ENST00000306156.8	protein_coding	1/14		INFO_REALIGN_3_PRIME	chr2	TogoVar
PRKCE_chr2_45646675_46192990	45941065	T T	TAAAAAAA others(16): Show TAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01516.hp1 HG01516.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0018 a0001c0002t0001g0018	1	168	0.0060	23	c.413 others(42): Show c.413-35342_413-35341insAAAAAAAAAAAAAAAAAAAAAAA	PRKCE	ENSG00000171132.14	transcript	ENST00000306156.8	protein_coding	2/14		INFO_REALIGN_3_PRIME	chr2	TogoVar
PRKCE_chr2_45646675_46192990	46123214	C C	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG01109.hp1 HG03579.hp2 HG00642.hp1 HG01109.hp1 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0012 a0001c0001t0002 a0001c0001t0005 a0001c0001t0012	a0001c0001t0002g0058 a0001c0001t0005g0149 a0001c0001t0012g0023 a0001c0001t0002g0058 a0001c0001t0005g0149 a0001c0001t0012g0023	3	168	0.0179	23	c.159 others(44): Show c.1593-21872_1593-21850dupTTTTTTTTTTTTTTTTTTTTTTT	PRKCE	ENSG00000171132.14	transcript	ENST00000306156.8	protein_coding	11/14		INFO_REALIGN_3_PRIME	chr2	TogoVar
PRKCG_chr19_53877197_53912652	53878650	A A	AAAAAAAT others(16): Show AAAAAAATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG06807.hp1 HG06807.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0002 a0001c0004t0002	a0001c0004t0002g0353 a0001c0004t0002g0353	1	362	0.0028	23	c.-38 others(34): Show c.-3845_-3844insAAAAAATATATATATATATATAT	PRKCG	ENSG00000126583.12	transcript	ENST00000263431.4	protein_coding		3546		chr19	TogoVar
PRKD1_chr14_29571479_29932847	29885804	T T	TAAAAAAA others(16): Show TAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18971.hp2 NA18971.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0140 a0001c0001t0003g0140	1	156	0.0064	23	c.264 others(42): Show c.264+41422_264+41444dupTTTTTTTTTTTTTTTTTTTTTTT	PRKD1	ENSG00000184304.17	transcript	ENST00000331968.11	protein_coding	1/17			chr14	TogoVar
PRKD2_chr19_46669316_46722114	46680946	A A	ATATATAT others(16): Show ATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01346.hp2 HG01934.hp1 HG01975.hp2 HG01346.hp2 HG01934.hp1 HG01975.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0007 a0001c0001t0001 a0001c0001t0007	a0001c0001t0001g0046 a0001c0001t0001g0105 a0001c0001t0007g0316 a0001c0001t0001g0046 a0001c0001t0001g0105 a0001c0001t0007g0316	3	378	0.0079	23	c.207 others(40): Show c.2070+703_2070+704insATATATATATATATATATATATA	PRKD2	ENSG00000105287.13	transcript	ENST00000291281.9	protein_coding	15/17			chr19	TogoVar
PRKD2_chr19_46669316_46722114	46680946	A A	ATATATAT others(16): Show ATATATATATATATATATATATTT	intron_variant intron_variant	MODIFIER	HG01517.hp1 NA18992.hp2 NA18993.hp1 HG01517.hp1 NA18992.hp2 NA18993.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0094 a0001c0001t0001g0172 a0001c0001t0002g0343 a0001c0001t0001g0094 a0001c0001t0001g0172 a0001c0001t0002g0343	3	378	0.0079	23	c.207 others(40): Show c.2070+703_2070+704insAAATATATATATATATATATATA	PRKD2	ENSG00000105287.13	transcript	ENST00000291281.9	protein_coding	15/17			chr19	TogoVar
PRKD2_chr19_46669316_46722114	46680947	T T	TATATATA others(16): Show TATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG01192.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0139 a0001c0001t0001g0139	1	378	0.0027	23	c.207 others(40): Show c.2070+702_2070+703insTATATATATATATATATATATAT	PRKD2	ENSG00000105287.13	transcript	ENST00000291281.9	protein_coding	15/17			chr19	TogoVar
PRKG1_chr10_51069487_52303350	51374093	A A	AAAAATAT others(16): Show AAAAATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0028 a0001c0001t0004g0028	1	64	0.0156	23	c.479 others(42): Show c.479-93629_479-93628insAAATATATATATATATATATATA	PRKG1	ENSG00000185532.20	transcript	ENST00000373980.11	protein_coding	2/17		INFO_REALIGN_3_PRIME	chr10	TogoVar
PRKG1_chr10_51069487_52303350	51374093	A A	AAATATAT others(16): Show AAATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00639.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0026 a0001c0001t0002g0026	1	64	0.0156	23	c.479 others(42): Show c.479-93629_479-93628insATATATATATATATATATATATA	PRKG1	ENSG00000185532.20	transcript	ENST00000373980.11	protein_coding	2/17		INFO_REALIGN_3_PRIME	chr10	TogoVar
PRKG1_chr10_51069487_52303350	51549120	C C	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0002 a0001c0005t0002	a0001c0005t0002g0037 a0001c0005t0002g0037	1	64	0.0156	23	c.592 others(42): Show c.592+81305_592+81306insTTTTTTTTTTTTTTTTTTTTTTT	PRKG1	ENSG00000185532.20	transcript	ENST00000373980.11	protein_coding	3/17		INFO_REALIGN_3_PRIME	chr10	TogoVar
PRKG1_chr10_51069487_52303350	52148957	C C	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0017 a0001c0002t0001g0017	1	64	0.0156	23	c.100 others(44): Show c.1002-12928_1002-12906dupTTTTTTTTTTTTTTTTTTTTTTT	PRKG1	ENSG00000185532.20	transcript	ENST00000373980.11	protein_coding	8/17		INFO_REALIGN_3_PRIME	chr10	TogoVar
PRKN_chr6_161342417_162732766	161874150	T T	TATATAAT others(16): Show TATATAATATATATTATATGTAAA	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG02922.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0027 a0001c0003t0003g0027	1	32	0.0313	23	c.735 others(42): Show c.735-88243_735-88242insTTTACATATAATATATATTATAT	PRKN	ENSG00000185345.25	transcript	ENST00000366898.6	protein_coding	6/11			chr6	TogoVar
PRKN_chr6_161342417_162732766	161897966	C C	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03704.hp2 HG03704.hp2	a0005 a0005	a0005c0011 a0005c0011	a0005c0011t0012 a0005c0011t0012	a0005c0011t0012g0009 a0005c0011t0012g0009	1	32	0.0313	23	c.734 others(42): Show c.734+75335_734+75336insTTTTTTTTTTTTTTTTTTTTTTT	PRKN	ENSG00000185345.25	transcript	ENST00000366898.6	protein_coding	6/11			chr6	TogoVar
PRKN_chr6_161342417_162732766	161897984	A A	AAAAAAAA others(16): Show AAAAAAAAAAAAAAAAAAAAAAAT	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0021 a0001c0001t0003g0021	1	32	0.0313	23	c.734 others(42): Show c.734+75317_734+75318insATTTTTTTTTTTTTTTTTTTTTT	PRKN	ENSG00000185345.25	transcript	ENST00000366898.6	protein_coding	6/11			chr6	TogoVar
PRKN_chr6_161342417_162732766	161902553	T T	TCTATCTA others(16): Show TCTATCTATCTATCTATTTATCTA	intron_variant intron_variant	MODIFIER	HG02897.hp1 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0022 a0001c0001t0003g0022	1	32	0.0313	23	c.734 others(42): Show c.734+70748_734+70749insTAGATAAATAGATAGATAGATAG	PRKN	ENSG00000185345.25	transcript	ENST00000366898.6	protein_coding	6/11			chr6	TogoVar
PRKN_chr6_161342417_162732766	162011442	T T	TTATAATA others(16): Show TTATAATATATAATATATTATATA	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0010 a0001c0008t0010	a0001c0008t0010g0014 a0001c0008t0010g0014	1	32	0.0313	23	c.619 others(42): Show c.619-38026_619-38025insTATATAATATATTATATATTATA	PRKN	ENSG00000185345.25	transcript	ENST00000366898.6	protein_coding	5/11			chr6	TogoVar
PRKN_chr6_161342417_162732766	162235969	G G	GAAAAAGA others(16): Show GAAAAAGAAAGAAAGAAAGAAAGA	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0007 a0001c0001t0002g0007	1	32	0.0313	23	c.412 others(42): Show c.412+26555_412+26556insTCTTTCTTTCTTTCTTTCTTTTT	PRKN	ENSG00000185345.25	transcript	ENST00000366898.6	protein_coding	3/11			chr6	TogoVar
PRKX_chrX_3599340_3718649	3637019	A A	AAAGGAAA others(16): Show AAAGGAAAAGGAAAGGAAGAAGGG	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00738.hp1 HG01496.hp1 others(2): Show HG00735.hp1 HG00738.hp1 HG01496.hp1 HG03491.hp2 NA20805.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0002c0004 a0001c0001 a0002c0003 a0002c0004	a0001c0001t0022 a0002c0003t0011 a0002c0003t0116 others(2): Show a0001c0001t0022 a0002c0003t0011 a0002c0003t0116 a0002c0003t0127 a0002c0004t0128	a0001c0001t0022g0154 a0002c0003t0011g0216 a0002c0003t0116g0195 others(2): Show a0001c0001t0022g0154 a0002c0003t0011g0216 a0002c0003t0116g0195 a0002c0003t0127g0185 a0002c0004t0128g0200	5	227	0.0220	23	c.719 others(40): Show c.719+4810_719+4832dupCCCTTCTTCCTTTCCTTTTCCTT	PRKX	ENSG00000183943.6	transcript	ENST00000262848.6	protein_coding	4/8			chrX	TogoVar
PRLR_chr5_35050702_35235487	35127454	G G	GAAGTCAT others(16): Show GAAGTCATTTTTATTATCAATACT	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01243.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0026 a0001c0001t0026	a0001c0001t0026g0175 a0001c0001t0026g0175	1	214	0.0047	23	c.-10 others(42): Show c.-105-9355_-105-9333dupAGTATTGATAATAAAAATGACTT	PRLR	ENSG00000113494.17	transcript	ENST00000618457.5	protein_coding	1/9			chr5	TogoVar
PRMT3_chr11_20382716_20514338	20513531	T T	TCTTGGGA others(16): Show TCTTGGGATTCCTTAATGCCTTCC	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19079.hp2 NA19079.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0032 a0001c0001t0002g0032	1	380	0.0026	23	c.51 others(34): Show c.5118_*5119insCTTGGGATTCCTTAATGCCTTCC	PRMT3	ENSG00000185238.13	transcript	ENST00000331079.11	protein_coding		4194		chr11	TogoVar

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