regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SH3GL2_chr9_17574066_17802124 | 17758561 | C | CAAAAAAA others(16): Show |
intron_variant | MODIFIER | HG02965.hp2 HG03579.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0021 | a0001c0001t0001g0235a0001c0001t0021g0258 | 2 | 260 | 0.0077 | 23 | c.115 others(40): Show |
SH3GL2 | ENSG00000107295.10 | transcript | ENST00000380607.5 | protein_coding | 2/8 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
SH3GLB1_chr1_86699576_86753184 | 86724880 | A | ATATATAT others(16): Show |
intron_variant | MODIFIER | HG02896.hp2 HG02897.hp2 |
a0001 | a0001c0001 | a0001c0001t0022 | a0001c0001t0022g0032 | 2 | 318 | 0.0063 | 23 | c.570 others(38): Show |
SH3GLB1 | ENSG00000097033.15 | transcript | ENST00000370558.8 | protein_coding | 5/8 | chr1 | TogoVar | ||||||
SH3GLB1_chr1_86699576_86753184 | 86724892 | A | AAAAAAAT others(16): Show |
intron_variant | MODIFIER | HG02735.hp2 | a0001 | a0001c0001 | a0001c0001t0032 | a0001c0001t0032g0116 | 1 | 318 | 0.0031 | 23 | c.570 others(38): Show |
SH3GLB1 | ENSG00000097033.15 | transcript | ENST00000370558.8 | protein_coding | 5/8 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
SH3KBP1_chrX_19528977_19892600 | 19531524 | C | CTTTTTTT others(16): Show |
downstream_gene_variant | MODIFIER | HG02559.hp1 | a0001 | a0001c0002 | a0001c0002t0012 | a0001c0002t0012g0186 | 1 | 204 | 0.0049 | 23 | c.*48 others(34): Show |
SH3KBP1 | ENSG00000147010.19 | transcript | ENST00000397821.8 | protein_coding | 2452 | chrX | TogoVar | ||||||
SH3KBP1_chrX_19528977_19892600 | 19551550 | C | CTTTTTTT others(16): Show |
intron_variant | MODIFIER | HG01070.hp1 HG02897.hp1 |
a0001 | a0001c0002a0001c0009 | a0001c0002t0002a0001c0009t0002 | a0001c0002t0002g0187a0001c0009t0002g0009 | 2 | 204 | 0.0098 | 23 | c.138 others(42): Show |
SH3KBP1 | ENSG00000147010.19 | transcript | ENST00000397821.8 | protein_coding | 13/17 | chrX | TogoVar | ||||||
SH3KBP1_chrX_19528977_19892600 | 19567551 | A | ATATATAT others(16): Show |
intron_variant | MODIFIER | NA19240.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0201 | 1 | 204 | 0.0049 | 23 | c.138 others(42): Show |
SH3KBP1 | ENSG00000147010.19 | transcript | ENST00000397821.8 | protein_coding | 13/17 | chrX | TogoVar | ||||||
SH3PXD2A_chr10_103589027_103860576 | 103608150 | T | TAAAAAAA others(16): Show |
intron_variant | MODIFIER | HG00140.hp2 HG00408.hp2 HG00438.hp2 others(57): Show |
a0001a0002a0009others(2): Show | a0001c0001a0001c0002a0001c0004others(7): Show | a0001c0001t0021a0001c0001t0045a0001c0001t0063others(33): Show | a0001c0001t0021g0150a0001c0001t0045g0098a0001c0001t0063g0017others(56): Show | 60 | 250 | 0.2400 | 23 | c.130 others(42): Show |
SH3PXD2A | ENSG00000107957.17 | transcript | ENST00000369774.9 | protein_coding | 13/14 | chr10 | TogoVar | ||||||
SH3PXD2A_chr10_103589027_103860576 | 103608150 | T | TAAAAAAA others(16): Show |
intron_variant | MODIFIER | HG01071.hp1 HG01074.hp2 HG02717.hp2 others(6): Show |
a0001 | a0001c0003a0001c0008 | a0001c0003t0072a0001c0008t0027a0001c0008t0051others(3): Show | a0001c0003t0072g0006a0001c0008t0027g0162a0001c0008t0027g0175others(6): Show | 9 | 250 | 0.0360 | 23 | c.130 others(42): Show |
SH3PXD2A | ENSG00000107957.17 | transcript | ENST00000369774.9 | protein_coding | 13/14 | chr10 | TogoVar | ||||||
SH3PXD2A_chr10_103589027_103860576 | 103608151 | A | AAAAAAAA others(16): Show |
intron_variant | MODIFIER | HG03041.hp2 HG03098.hp1 HG03225.hp2 others(1): Show |
a0001 | a0001c0001a0001c0005 | a0001c0001t0042a0001c0005t0016 | a0001c0001t0042g0097a0001c0005t0016g0209a0001c0005t0016g0210others(1): Show | 4 | 250 | 0.0160 | 23 | c.130 others(42): Show |
SH3PXD2A | ENSG00000107957.17 | transcript | ENST00000369774.9 | protein_coding | 13/14 | chr10 | TogoVar | ||||||
SH3PXD2A_chr10_103589027_103860576 | 103743566 | T | TATATGTT others(16): Show |
intron_variant | MODIFIER | HG01978.hp2 NA20805.hp1 |
a0001 | a0001c0002a0001c0004 | a0001c0002t0050a0001c0004t0020 | a0001c0002t0050g0124a0001c0004t0020g0104 | 2 | 250 | 0.0080 | 23 | c.230 others(40): Show |
SH3PXD2A | ENSG00000107957.17 | transcript | ENST00000369774.9 | protein_coding | 3/14 | chr10 | TogoVar | ||||||
SH3PXD2B_chr5_172328499_172459525 | 172329540 | C | CTTTTTTT others(16): Show |
downstream_gene_variant | MODIFIER | NA19012.hp2 | a0001 | a0001c0001 | a0001c0001t0009 | a0001c0001t0009g0156 | 1 | 280 | 0.0036 | 23 | c.*88 others(34): Show |
SH3PXD2B | ENSG00000174705.13 | transcript | ENST00000311601.6 | protein_coding | 3958 | chr5 | TogoVar | ||||||
SH3RF3_chr2_109124205_109509634 | 109495751 | C | CAGAGTGC others(16): Show |
intron_variant | MODIFIER | NA19062.hp2 | a0001 | a0001c0001 | a0001c0001t0007 | a0001c0001t0007g0139 | 1 | 172 | 0.0058 | 23 | c.248 others(42): Show |
SH3RF3 | ENSG00000172985.11 | transcript | ENST00000309415.8 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SHC4_chr15_48818741_48968919 | 48919295 | A | ATTTTTTT others(16): Show |
intron_variant | MODIFIER | HG00597.hp2 HG02273.hp1 NA18946.hp2 others(4): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0001a0001c0001t0002a0002c0003t0003 | a0001c0001t0001g0160a0001c0001t0001g0162a0001c0001t0001g0315others(4): Show | 7 | 384 | 0.0182 | 23 | c.656 others(40): Show |
SHC4 | ENSG00000185634.12 | transcript | ENST00000332408.9 | protein_coding | 2/11 | chr15 | TogoVar | ||||||
SHCBP1L_chr1_182894865_182958166 | 182924935 | G | GAAGAAGA others(16): Show |
intron_variant | MODIFIER | HG02970.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0266 | 1 | 302 | 0.0033 | 23 | c.118 others(42): Show |
SHCBP1L | ENSG00000157060.16 | transcript | ENST00000367547.8 | protein_coding | 6/9 | chr1 | TogoVar | ||||||
SHCBP1_chr16_46573591_46626379 | 46610544 | A | ATTTTTTT others(16): Show |
intron_variant | MODIFIER | HG02965.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0037 | 1 | 184 | 0.0054 | 23 | c.597 others(40): Show |
SHCBP1 | ENSG00000171241.9 | transcript | ENST00000303383.8 | protein_coding | 4/12 | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13004954 | A | AAAAAAAG others(16): Show |
intron_variant | MODIFIER | NA19000.hp1 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0086 | 1 | 214 | 0.0047 | 23 | c.691 others(42): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
SHISA9_chr16_12896598_13245416 | 13004962 | A | AAAAAGAA others(16): Show |
intron_variant | MODIFIER | HG00099.hp2 HG00280.hp2 HG00438.hp1 others(76): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(49): Show | a0001c0001t0001g0008a0001c0001t0001g0011a0001c0001t0001g0070others(76): Show | 79 | 214 | 0.3692 | 23 | c.691 others(42): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
SHISAL1_chr22_44238665_44317951 | 44290529 | C | CAAAAAAA others(16): Show |
intron_variant | MODIFIER | HG02717.hp1 | a0001 | a0001c0350 | a0001c0350t0024 | a0001c0350t0024g0030 | 1 | 380 | 0.0026 | 23 | c.282 others(40): Show |
SHISAL1 | ENSG00000138944.8 | transcript | ENST00000381176.5 | protein_coding | 3/4 | chr22 | TogoVar | ||||||
SHOX_chrX_625791_656584 | 636970 | A | ATATATAT others(16): Show |
intron_variant | MODIFIER | HG02922.hp2 | a0001 | a0001c0001 | a0001c0001t0024 | a0001c0001t0024g0160 | 1 | 220 | 0.0046 | 23 | c.486 others(40): Show |
SHOX | ENSG00000185960.15 | transcript | ENST00000686671.1 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
SHROOM2_chrX_9781429_9954443 | 9875080 | C | CAAAAAAA others(16): Show |
intron_variant | MODIFIER | HG03492.hp1 | a0003 | a0003c0004 | a0003c0004t0003 | a0003c0004t0003g0175 | 1 | 256 | 0.0039 | 23 | c.317 others(40): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
SHROOM3_chr4_76430229_76788253 | 76735868 | A | AAAAAAAT others(16): Show |
intron_variant | MODIFIER | NA19064.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0164 | 1 | 218 | 0.0046 | 23 | c.588 others(40): Show |
SHROOM3 | ENSG00000138771.16 | transcript | ENST00000296043.7 | protein_coding | 4/10 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
SHROOM3_chr4_76430229_76788253 | 76735868 | A | AAAAATAT others(16): Show |
intron_variant | MODIFIER | HG02293.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0021 | 1 | 218 | 0.0046 | 23 | c.588 others(40): Show |
SHROOM3 | ENSG00000138771.16 | transcript | ENST00000296043.7 | protein_coding | 4/10 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
SHTN1_chr10_116876477_117010187 | 116899506 | G | GTGTGTGT others(16): Show |
intron_variant | MODIFIER | HG00735.hp2 | a0001 | a0001c0002 | a0001c0002t0042 | a0001c0002t0042g0136 | 1 | 292 | 0.0034 | 23 | c.167 others(42): Show |
SHTN1 | ENSG00000187164.20 | transcript | ENST00000355371.9 | protein_coding | 16/16 | chr10 | TogoVar | ||||||
SIGIRR_chr11_400716_419999 | 401785 | G | GGCCCGCT others(16): Show |
downstream_gene_variant | MODIFIER | HG03834.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0023 | 1 | 242 | 0.0041 | 23 | c.*41 others(34): Show |
SIGIRR | ENSG00000185187.13 | transcript | ENST00000431843.7 | protein_coding | 3930 | chr11 | TogoVar | ||||||
SIGIRR_chr11_400716_419999 | 401971 | G | GACCCGCT others(16): Show |
downstream_gene_variant | MODIFIER | HG02615.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0040 | 1 | 242 | 0.0041 | 23 | c.*39 others(34): Show |
SIGIRR | ENSG00000185187.13 | transcript | ENST00000431843.7 | protein_coding | 3744 | chr11 | TogoVar | ||||||
SIGIRR_chr11_400716_419999 | 402045 | C | CGCTCACC others(16): Show |
downstream_gene_variant | MODIFIER | HG00099.hp2 HG00544.hp1 HG00735.hp1 others(14): Show |
a0001a0004 | a0001c0001a0004c0005 | a0001c0001t0001a0004c0005t0001 | a0001c0001t0001g0009a0001c0001t0001g0017a0001c0001t0001g0038others(14): Show | 17 | 242 | 0.0703 | 23 | c.*38 others(34): Show |
SIGIRR | ENSG00000185187.13 | transcript | ENST00000431843.7 | protein_coding | 3670 | chr11 | TogoVar | ||||||
SIGIRR_chr11_400716_419999 | 402115 | C | CGCTCACC others(16): Show |
downstream_gene_variant | MODIFIER | HG00558.hp1 HG01099.hp2 HG02897.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003 | a0001c0001t0001g0045a0001c0001t0001g0074a0001c0001t0003g0110 | 3 | 242 | 0.0124 | 23 | c.*37 others(34): Show |
SIGIRR | ENSG00000185187.13 | transcript | ENST00000431843.7 | protein_coding | 3600 | chr11 | TogoVar | ||||||
SIGIRR_chr11_400716_419999 | 402343 | G | GCCCCGCT others(16): Show |
downstream_gene_variant | MODIFIER | HG00558.hp1 HG00558.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0074a0001c0001t0001g0158 | 2 | 242 | 0.0083 | 23 | c.*35 others(34): Show |
SIGIRR | ENSG00000185187.13 | transcript | ENST00000431843.7 | protein_coding | 3372 | chr11 | TogoVar | ||||||
SIGIRR_chr11_400716_419999 | 402417 | C | CGCTCACC others(16): Show |
downstream_gene_variant | MODIFIER | HG00280.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0126 | 1 | 242 | 0.0041 | 23 | c.*34 others(34): Show |
SIGIRR | ENSG00000185187.13 | transcript | ENST00000431843.7 | protein_coding | 3298 | chr11 | TogoVar | ||||||
SIGIRR_chr11_400716_419999 | 402606 | G | GCCCCGCT others(16): Show |
downstream_gene_variant | MODIFIER | HG01358.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0094 | 1 | 242 | 0.0041 | 23 | c.*32 others(34): Show |
SIGIRR | ENSG00000185187.13 | transcript | ENST00000431843.7 | protein_coding | 3109 | chr11 | TogoVar | ||||||
SIGIRR_chr11_400716_419999 | 402659 | G | GCCCCGCT others(16): Show |
downstream_gene_variant | MODIFIER | HG03831.hp1 NA19065.hp1 |
a0005 | a0005c0009 | a0005c0009t0001 | a0005c0009t0001g0064a0005c0009t0001g0073 | 2 | 242 | 0.0083 | 23 | c.*32 others(34): Show |
SIGIRR | ENSG00000185187.13 | transcript | ENST00000431843.7 | protein_coding | 3056 | chr11 | TogoVar | ||||||
SIGIRR_chr11_400716_419999 | 402659 | G | GCCCCGCT others(16): Show |
downstream_gene_variant | MODIFIER | HG00280.hp1 HG00323.hp1 HG00323.hp2 others(62): Show |
a0001a0004a0005 | a0001c0001a0004c0005a0005c0013 | a0001c0001t0001a0001c0001t0003a0004c0005t0001others(1): Show | a0001c0001t0001g0003a0001c0001t0001g0007a0001c0001t0001g0008others(61): Show | 65 | 242 | 0.2686 | 23 | c.*32 others(34): Show |
SIGIRR | ENSG00000185187.13 | transcript | ENST00000431843.7 | protein_coding | 3056 | chr11 | TogoVar | ||||||
SIGLEC6_chr19_51512819_51536670 | 51526160 | T | TTCCAAGG others(16): Show |
intron_variant | MODIFIER | HG00597.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0074 | 1 | 418 | 0.0024 | 23 | c.118 others(42): Show |
SIGLEC6 | ENSG00000105492.16 | transcript | ENST00000425629.8 | protein_coding | 7/7 | chr19 | TogoVar | ||||||
SIK1_chr21_43409483_43432131 | 43410320 | T | TCCCTCTC others(16): Show |
downstream_gene_variant | MODIFIER | HG02109.hp1 HG02109.hp2 HG02280.hp1 others(9): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0002 | a0001c0001t0001a0001c0003t0007a0002c0002t0002others(1): Show | a0001c0001t0001g0002a0001c0003t0007g0006a0002c0002t0002g0001others(3): Show | 12 | 32 | 0.3750 | 23 | c.*64 others(34): Show |
SIK1 | ENSG00000142178.9 | transcript | ENST00000270162.8 | protein_coding | 4162 | chr21 | TogoVar | ||||||
SIK3_chr11_116838402_117103428 | 116842618 | C | CTTTTTTT others(16): Show |
downstream_gene_variant | MODIFIER | HG00099.hp2 HG00639.hp1 HG00735.hp1 others(13): Show |
a0001a0002 | a0001c0002a0001c0026a0002c0003 | a0001c0002t0003a0001c0002t0029a0001c0026t0003others(3): Show | a0001c0002t0003g0002a0001c0002t0003g0006a0001c0002t0003g0175others(13): Show | 16 | 366 | 0.0437 | 23 | c.*30 others(34): Show |
SIK3 | ENSG00000160584.17 | transcript | ENST00000445177.6 | protein_coding | 783 | chr11 | TogoVar | ||||||
SIK3_chr11_116838402_117103428 | 116890239 | G | GCCTCTCT others(16): Show |
intron_variant | MODIFIER | HG02015.hp1 | a0002 | a0002c0003 | a0002c0003t0007 | a0002c0003t0007g0311 | 1 | 366 | 0.0027 | 23 | c.865 others(40): Show |
SIK3 | ENSG00000160584.17 | transcript | ENST00000445177.6 | protein_coding | 6/24 | chr11 | TogoVar | ||||||
SIK3_chr11_116838402_117103428 | 116942545 | C | CAATGGGC others(16): Show |
intron_variant | MODIFIER | HG02257.hp1 | a0003 | a0003c0005 | a0003c0005t0005 | a0003c0005t0005g0019 | 1 | 366 | 0.0027 | 23 | c.454 others(42): Show |
SIK3 | ENSG00000160584.17 | transcript | ENST00000445177.6 | protein_coding | 3/24 | chr11 | TogoVar | ||||||
SIK3_chr11_116838402_117103428 | 116965753 | A | AACATGGT others(16): Show |
intron_variant | MODIFIER | HG00735.hp1 HG01256.hp2 HG01258.hp1 |
a0002 | a0002c0003 | a0002c0003t0007a0002c0003t0009 | a0002c0003t0007g0343a0002c0003t0009g0315a0002c0003t0009g0316 | 3 | 366 | 0.0082 | 23 | c.274 others(40): Show |
SIK3 | ENSG00000160584.17 | transcript | ENST00000445177.6 | protein_coding | 1/24 | chr11 | TogoVar | ||||||
SIK3_chr11_116838402_117103428 | 117013907 | G | GTGTGTGT others(16): Show |
intron_variant | MODIFIER | NA18945.hp2 | a0001 | a0001c0002 | a0001c0002t0003 | a0001c0002t0003g0301 | 1 | 366 | 0.0027 | 23 | c.274 others(42): Show |
SIK3 | ENSG00000160584.17 | transcript | ENST00000445177.6 | protein_coding | 1/24 | chr11 | TogoVar | ||||||
SIK3_chr11_116838402_117103428 | 117021928 | C | CAAAAAAA others(16): Show |
intron_variant | MODIFIER | HG01928.hp1 NA18970.hp2 |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0002a0002c0003t0007 | a0001c0001t0002g0216a0002c0003t0007g0307 | 2 | 366 | 0.0055 | 23 | c.274 others(42): Show |
SIK3 | ENSG00000160584.17 | transcript | ENST00000445177.6 | protein_coding | 1/24 | chr11 | TogoVar | ||||||
SIK3_chr11_116838402_117103428 | 117023615 | A | ATATATAT others(16): Show |
intron_variant | MODIFIER | HG01257.hp1 HG01258.hp2 |
a0002 | a0002c0004 | a0002c0004t0006 | a0002c0004t0006g0160a0002c0004t0006g0162 | 2 | 366 | 0.0055 | 23 | c.274 others(42): Show |
SIK3 | ENSG00000160584.17 | transcript | ENST00000445177.6 | protein_coding | 1/24 | chr11 | TogoVar | ||||||
SIK3_chr11_116838402_117103428 | 117023621 | A | AAAAAAAA others(16): Show |
intron_variant | MODIFIER | NA19090.hp2 | a0001 | a0001c0002 | a0001c0002t0029 | a0001c0002t0029g0298 | 1 | 366 | 0.0027 | 23 | c.274 others(42): Show |
SIK3 | ENSG00000160584.17 | transcript | ENST00000445177.6 | protein_coding | 1/24 | chr11 | TogoVar | ||||||
SIK3_chr11_116838402_117103428 | 117023621 | A | AAAAAAAA others(16): Show |
intron_variant | MODIFIER | NA19070.hp2 | a0001 | a0001c0002 | a0001c0002t0003 | a0001c0002t0003g0288 | 1 | 366 | 0.0027 | 23 | c.274 others(42): Show |
SIK3 | ENSG00000160584.17 | transcript | ENST00000445177.6 | protein_coding | 1/24 | chr11 | TogoVar | ||||||
SIK3_chr11_116838402_117103428 | 117023621 | A | AAAAAAAT others(16): Show |
intron_variant | MODIFIER | HG02165.hp2 NA18966.hp1 |
a0001a0002 | a0001c0002a0002c0004 | a0001c0002t0003a0002c0004t0006 | a0001c0002t0003g0286a0002c0004t0006g0294 | 2 | 366 | 0.0055 | 23 | c.274 others(42): Show |
SIK3 | ENSG00000160584.17 | transcript | ENST00000445177.6 | protein_coding | 1/24 | chr11 | TogoVar | ||||||
SIK3_chr11_116838402_117103428 | 117023621 | A | ATATATAT others(16): Show |
intron_variant | MODIFIER | HG00280.hp1 | a0002 | a0002c0004 | a0002c0004t0006 | a0002c0004t0006g0161 | 1 | 366 | 0.0027 | 23 | c.274 others(42): Show |
SIK3 | ENSG00000160584.17 | transcript | ENST00000445177.6 | protein_coding | 1/24 | chr11 | TogoVar | ||||||
SIL1_chr5_138941724_139203368 | 139169861 | C | CCCTCTTT others(16): Show |
intron_variant | MODIFIER | HG00323.hp2 HG00735.hp1 HG01069.hp2 others(47): Show |
a0001a0009 | a0001c0001a0001c0002a0001c0010others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(3): Show | a0001c0001t0001g0035a0001c0001t0001g0043a0001c0001t0001g0044others(47): Show | 50 | 200 | 0.2500 | 23 | c.-11 others(42): Show |
SIL1 | ENSG00000120725.13 | transcript | ENST00000394817.7 | protein_coding | 1/9 | chr5 | TogoVar | ||||||
SIM2_chr21_36694115_36754917 | 36737961 | C | CAAAAAAA others(16): Show |
intron_variant | MODIFIER | HG00621.hp1 HG00735.hp2 HG01256.hp1 others(13): Show |
a0001a0007 | a0001c0001a0001c0002a0007c0017 | a0001c0001t0004a0001c0002t0002a0001c0002t0006others(2): Show | a0001c0001t0004g0088a0001c0001t0004g0105a0001c0002t0002g0004others(12): Show | 16 | 410 | 0.0390 | 23 | c.851 others(40): Show |
SIM2 | ENSG00000159263.16 | transcript | ENST00000290399.11 | protein_coding | 7/10 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |||||
SIPA1L1_chr14_71315476_71746209 | 71417469 | C | CAAAAAAA others(16): Show |
intron_variant | MODIFIER | HG03239.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0040 | 1 | 174 | 0.0058 | 23 | c.-46 others(44): Show |
SIPA1L1 | ENSG00000197555.10 | transcript | ENST00000381232.8 | protein_coding | 2/23 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
SIPA1L2_chr1_232392965_232635133 | 232486791 | G | GAAAACAA others(16): Show |
intron_variant | MODIFIER | NA18978.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0183 | 1 | 292 | 0.0034 | 23 | c.180 others(42): Show |
SIPA1L2 | ENSG00000116991.12 | transcript | ENST00000674635.1 | protein_coding | 5/22 | chr1 | TogoVar | ||||||
SIPA1L2_chr1_232392965_232635133 | 232631983 | C | CAAAAAAA others(16): Show |
upstream_gene_variant | MODIFIER | HG02572.hp2 NA18522.hp2 |
a0001a0002 | a0001c0001a0002c0012 | a0001c0001t0010a0002c0012t0003 | a0001c0001t0010g0285a0002c0012t0003g0284 | 2 | 292 | 0.0069 | 23 | c.-24 others(34): Show |
SIPA1L2 | ENSG00000116991.12 | transcript | ENST00000674635.1 | protein_coding | 1851 | chr1 | TogoVar |