Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
TRIM2_chr4_153199443_153344317	153273270	C C	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0047 a0001c0002t0004g0047	1	268	0.0037	23	c.216 others(40): Show c.216-2622_216-2600dupTTTTTTTTTTTTTTTTTTTTTTT	TRIM2	ENSG00000109654.16	transcript	ENST00000338700.10	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr4	TogoVar
TRIM33_chr1_114387790_114516203	114413578	A A	AAAGAAAA others(16): Show AAAGAAAAGAAAAAGACTTTTTCT	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG02451.hp1 HG02895.hp1 HG00741.hp2 HG02451.hp1 HG02895.hp1	a0001 a0004 a0001 a0004	a0001c0002 a0004c0007 a0001c0002 a0004c0007	a0001c0002t0018 a0004c0007t0001 a0001c0002t0018 a0004c0007t0001	a0001c0002t0018g0145 a0001c0002t0018g0146 a0004c0007t0001g0014 a0001c0002t0018g0145 a0001c0002t0018g0146 a0004c0007t0001g0014	3	208	0.0144	23	c.206 others(42): Show c.2062-3263_2062-3262insAGAAAAAGTCTTTTTCTTTTCTT	TRIM33	ENSG00000197323.12	transcript	ENST00000358465.7	protein_coding	11/19			chr1	TogoVar
TRIM36_chr5_115119772_115174908	115128758	C C	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03654.hp1 HG04115.hp2 HG03654.hp1 HG04115.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0010 a0001c0001t0001 a0002c0002t0010	a0001c0001t0001g0159 a0002c0002t0010g0332 a0001c0001t0001g0159 a0002c0002t0010g0332	2	408	0.0049	23	c.179 others(42): Show c.1796+1811_1796+1833dupTTTTTTTTTTTTTTTTTTTTTTT	TRIM36	ENSG00000152503.10	transcript	ENST00000513154.6	protein_coding	9/9			chr5	TogoVar
TRIM37_chr17_58993202_59111880	59042443	A A	ATATATAT others(16): Show ATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19070.hp2 NA19070.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0016 a0001c0001t0003g0016	1	342	0.0029	23	c.166 others(40): Show c.1668-546_1668-545insATATATATATATATATATATATA	TRIM37	ENSG00000108395.14	transcript	ENST00000262294.12	protein_coding	16/23			chr17	TogoVar
TRIM37_chr17_58993202_59111880	59056716	C C	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03492.hp2 HG03492.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0298 a0001c0001t0001g0298	1	342	0.0029	23	c.119 others(40): Show c.1199+136_1199+158dupTTTTTTTTTTTTTTTTTTTTTTT	TRIM37	ENSG00000108395.14	transcript	ENST00000262294.12	protein_coding	13/23			chr17	TogoVar
TRIM56_chr7_101080481_101102967	101091766	C C	CTCTCCCT others(16): Show CTCTCCCTCTCCCTCTCCCCACGG	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03130.hp1 HG03225.hp2 HG03471.hp1 others(2): Show HG03130.hp1 HG03225.hp2 HG03471.hp1 HG03486.hp2 HG03579.hp1	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0044 a0001c0008t0121 a0001c0008t0122 others(1): Show a0001c0008t0044 a0001c0008t0121 a0001c0008t0122 a0001c0008t0123	a0001c0008t0044g0010 a0001c0008t0044g0021 a0001c0008t0121g0010 others(2): Show a0001c0008t0044g0010 a0001c0008t0044g0021 a0001c0008t0121g0010 a0001c0008t0122g0020 a0001c0008t0123g0010	5	420	0.0119	23	c.21 others(34): Show c.2196_*2218dupCCCTCTCCCCACGGTCTCCCTCT	TRIM56	ENSG00000169871.13	transcript	ENST00000306085.11	protein_coding	3/3	2219	INFO_REALIGN_3_PRIME	chr7	TogoVar
TRIM61_chr4_164963281_164982657	164978709	T T	TATTTATT others(16): Show TATTTATTTTTTTTTTTATTTTTA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0004 a0003c0004t0004	a0003c0004t0004g0058 a0003c0004t0004g0058	1	408	0.0025	23	c.-16 others(34): Show c.-1655_-1654insTAAAAATAAAAAAAAAAATAAAT	TRIM61	ENSG00000183439.10	transcript	ENST00000710271.1	protein_coding		1053		chr4	TogoVar
TRIM66_chr11_8607040_8687665	8628636	A A	AAAAAAAA others(16): Show AAAAAAAAAAAAAAAAAGAGAGAG	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00735.hp2 HG01071.hp2 others(16): Show HG00099.hp1 HG00735.hp2 HG01071.hp2 HG01099.hp1 HG01255.hp2 HG01496.hp1 HG02056.hp2 HG02083.hp1 HG03017.hp1 HG03704.hp1 HG03834.hp1 NA18999.hp2 NA19004.hp1 NA19005.hp2 NA19011.hp1 NA19054.hp2 NA19056.hp1 NA19064.hp2 NA20805.hp1	a0004 a0015 a0004 a0015	a0004c0004 a0015c0014 a0004c0004 a0015c0014	a0004c0004t0004 a0004c0004t0016 a0004c0004t0033 others(1): Show a0004c0004t0004 a0004c0004t0016 a0004c0004t0033 a0015c0014t0004	a0004c0004t0004g0020 a0004c0004t0004g0106 a0004c0004t0004g0172 others(16): Show a0004c0004t0004g0020 a0004c0004t0004g0106 a0004c0004t0004g0172 a0004c0004t0004g0300 a0004c0004t0004g0304 a0004c0004t0004g0309 a0004c0004t0004g0312 a0004c0004t0004g0332 a0004c0004t0004g0335 a0004c0004t0004g0339 a0004c0004t0004g0345 a0004c0004t0004g0351 a0004c0004t0004g0366 a0004c0004t0016g0313 a0004c0004t0016g0317 a0004c0004t0033g0355 a0015c0014t0004g0305 a0015c0014t0004g0308 a0015c0014t0004g0311	19	390	0.0487	23	c.231 others(42): Show c.2311-3409_2311-3408insCTCTCTCTTTTTTTTTTTTTTTT	TRIM66	ENSG00000166436.18	transcript	ENST00000646038.2	protein_coding	15/24			chr11	TogoVar
TRIM66_chr11_8607040_8687665	8628636	A A	AAAAAAAA others(16): Show AAAAAAAAAAAAAAAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG01261.hp2 NA18955.hp1 HG01261.hp2 NA18955.hp1	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0004 a0004c0004t0016 a0004c0004t0004 a0004c0004t0016	a0004c0004t0004g0356 a0004c0004t0016g0322 a0004c0004t0004g0356 a0004c0004t0016g0322	2	390	0.0051	23	c.231 others(42): Show c.2311-3409_2311-3408insCTCTCTCTCTTTTTTTTTTTTTT	TRIM66	ENSG00000166436.18	transcript	ENST00000646038.2	protein_coding	15/24			chr11	TogoVar
TRIM66_chr11_8607040_8687665	8628636	A A	AAAAAAAA others(16): Show AAAAAAAAAAAAAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0017 a0017	a0017c0018 a0017c0018	a0017c0018t0023 a0017c0018t0023	a0017c0018t0023g0119 a0017c0018t0023g0119	1	390	0.0026	23	c.231 others(42): Show c.2311-3409_2311-3408insCTCTCTCTCTCTTTTTTTTTTTT	TRIM66	ENSG00000166436.18	transcript	ENST00000646038.2	protein_coding	15/24			chr11	TogoVar
TRIM67_chr1_231157058_231226565	231167319	C C	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01361.hp2 HG02818.hp1 NA20905.hp2 HG01361.hp2 HG02818.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0001 a0001c0001t0002 a0001c0001t0005	a0001c0001t0001g0337 a0001c0001t0002g0336 a0001c0001t0005g0215 a0001c0001t0001g0337 a0001c0001t0002g0336 a0001c0001t0005g0215	3	354	0.0085	23	c.104 others(42): Show c.1044+3327_1044+3328insTTTTTTTTTTTTTTTTTTTTTTT	TRIM67	ENSG00000119283.16	transcript	ENST00000366653.6	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr1	TogoVar
TRIM67_chr1_231157058_231226565	231176912	A A	AAAAAAAA others(16): Show AAAAAAAAAAAAAAAAAAAAAAAC	intron_variant intron_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0052 a0001c0001t0052	a0001c0001t0052g0350 a0001c0001t0052g0350	1	354	0.0028	23	c.104 others(44): Show c.1044+12910_1044+12911insAAAAAAAAAAACAAAAAAAAAAA	TRIM67	ENSG00000119283.16	transcript	ENST00000366653.6	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr1	TogoVar
TRIM68_chr11_4593672_4613231	4613098	A A	ACATGTAC others(16): Show ACATGTACCCTAAAACTTAAAGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0026 a0001c0001t0026	a0001c0001t0026g0040 a0001c0001t0026g0040	1	362	0.0028	23	c.-51 others(34): Show c.-5130_-5129insCACTTTAAGTTTTAGGGTACATG	TRIM68	ENSG00000167333.13	transcript	ENST00000300747.10	protein_coding		4868		chr11	TogoVar
TRIM69_chr15_44731528_44772827	44768654	C C	CTATATAT others(16): Show CTATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19078.hp1 NA19078.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0139 a0001c0001t0001g0139	1	349	0.0029	23	c.88 others(32): Show c.882_*883insTATATATATATATATATATATAT	TRIM69	ENSG00000185880.13	transcript	ENST00000329464.9	protein_coding		828		chr15	TogoVar
TRIM71_chr3_32812997_32902824	32833184	T T	TAAAAAAA others(16): Show TAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02027.hp2 NA18982.hp2 HG02027.hp2 NA18982.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0200 a0001c0002t0002g0206 a0001c0002t0002g0200 a0001c0002t0002g0206	2	328	0.0061	23	c.852 others(42): Show c.852+14258_852+14280dupAAAAAAAAAAAAAAAAAAAAAAA	TRIM71	ENSG00000206557.6	transcript	ENST00000383763.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr3	TogoVar
TRIM9_chr14_50970266_51100105	51029624	G G	GTGTAAGC others(16): Show GTGTAAGCAAGAAATTCTAATAAT	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02818.hp1 HG03130.hp1 others(1): Show HG01243.hp1 HG02818.hp1 HG03130.hp1 HG03579.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 others(1): Show a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 a0002c0002t0004	a0001c0001t0001g0216 a0001c0001t0002g0316 a0002c0002t0001g0307 others(1): Show a0001c0001t0001g0216 a0001c0001t0002g0316 a0002c0002t0001g0307 a0002c0002t0004g0212	4	342	0.0117	23	c.823 others(40): Show c.823-4287_823-4265dupATTATTAGAATTTCTTGCTTACA	TRIM9	ENSG00000100505.14	transcript	ENST00000684578.1	protein_coding	1/12			chr14	TogoVar
TRIML1_chr4_188134441_188152743	188151445	G G	GGGGGTGA others(16): Show GGGGGTGAGAAGGGGAGTGAGAGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00673.hp2 HG02922.hp2 HG03195.hp2 others(1): Show HG00673.hp2 HG02922.hp2 HG03195.hp2 NA19074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0078 a0001c0001t0001g0083 a0001c0001t0001g0094 others(1): Show a0001c0001t0001g0078 a0001c0001t0001g0083 a0001c0001t0001g0094 a0001c0001t0001g0101	4	228	0.0175	23	c.40 others(34): Show c.4073_*4074insGGGGTGAGAAGGGGAGTGAGAGA	TRIML1	ENSG00000184108.8	transcript	ENST00000332517.4	protein_coding		3703		chr4	TogoVar
TRIML1_chr4_188134441_188152743	188151561	A A	AGAGAGGG others(16): Show AGAGAGGGGGGTGAGAAGGGGAGT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01952.hp2 HG01952.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0019 a0002c0002t0002g0019	1	228	0.0044	23	c.41 others(34): Show c.4189_*4190insGAGAGGGGGGTGAGAAGGGGAGT	TRIML1	ENSG00000184108.8	transcript	ENST00000332517.4	protein_coding		3819		chr4	TogoVar
TRIML1_chr4_188134441_188152743	188151697	G G	GGGGAGTG others(16): Show GGGGAGTGAGAGAGAGGGTGAGAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0083 a0001c0001t0001g0083	1	228	0.0044	23	c.43 others(34): Show c.4325_*4326insGGGAGTGAGAGAGAGGGTGAGAA	TRIML1	ENSG00000184108.8	transcript	ENST00000332517.4	protein_coding		3955		chr4	TogoVar
TRIML1_chr4_188134441_188152743	188151900	G G	GAGGGTGA others(16): Show GAGGGTGAGAAGGGGAGTGAGAGT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18957.hp2 NA18957.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0017 a0001c0001t0001g0017	1	228	0.0044	23	c.45 others(34): Show c.4528_*4529insAGGGTGAGAAGGGGAGTGAGAGT	TRIML1	ENSG00000184108.8	transcript	ENST00000332517.4	protein_coding		4158		chr4	TogoVar
TRIML1_chr4_188134441_188152743	188152089	T T	TGGGGGTG others(16): Show TGGGGGTGAGAAGGGAGTGGATGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0111 a0001c0001t0001g0111	1	228	0.0044	23	c.47 others(34): Show c.4717_*4718insGGGGGTGAGAAGGGAGTGGATGA	TRIML1	ENSG00000184108.8	transcript	ENST00000332517.4	protein_coding		4347		chr4	TogoVar
TRIML1_chr4_188134441_188152743	188152171	A A	AAGGGGAG others(16): Show AAGGGGAGTGAGAGTGGGGGTGAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG04184.hp1 HG04184.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0104 a0001c0001t0001g0104	1	228	0.0044	23	c.47 others(34): Show c.4799_*4800insAGGGGAGTGAGAGTGGGGGTGAG	TRIML1	ENSG00000184108.8	transcript	ENST00000332517.4	protein_coding		4429		chr4	TogoVar
TRIML1_chr4_188134441_188152743	188152257	A A	AGGGGTGA others(16): Show AGGGGTGAGAAGGGGAGTGAGAGT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA20805.hp2 NA20805.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0062 a0001c0004t0001g0062	1	228	0.0044	23	c.48 others(34): Show c.4885_*4886insGGGGTGAGAAGGGGAGTGAGAGT	TRIML1	ENSG00000184108.8	transcript	ENST00000332517.4	protein_coding		4515		chr4	TogoVar
TRIML1_chr4_188134441_188152743	188152282	G G	GGGGGTGA others(16): Show GGGGGTGAGAAGGGGAGTGAGAGT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18997.hp2 NA18997.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0103 a0001c0001t0001g0103	1	228	0.0044	23	c.49 others(34): Show c.4910_*4911insGGGGTGAGAAGGGGAGTGAGAGT	TRIML1	ENSG00000184108.8	transcript	ENST00000332517.4	protein_coding		4540		chr4	TogoVar
TRIML1_chr4_188134441_188152743	188152293	G G	GGGGAGTG others(16): Show GGGGAGTGAGAGTGGGGGTGAGAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01081.hp2 HG01081.hp2	a0003 a0003	a0003c0005 a0003c0005	a0003c0005t0002 a0003c0005t0002	a0003c0005t0002g0018 a0003c0005t0002g0018	1	228	0.0044	23	c.49 others(34): Show c.4921_*4922insGGGAGTGAGAGTGGGGGTGAGAA	TRIML1	ENSG00000184108.8	transcript	ENST00000332517.4	protein_coding		4551		chr4	TogoVar
TRIML1_chr4_188134441_188152743	188152310	G G	GTGAGAAG others(16): Show GTGAGAAGGGAAGGTGAGTGGGGC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01978.hp2 HG01978.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0032 a0001c0001t0001g0032	1	228	0.0044	23	c.49 others(34): Show c.4938_*4939insTGAGAAGGGAAGGTGAGTGGGGC	TRIML1	ENSG00000184108.8	transcript	ENST00000332517.4	protein_coding		4568		chr4	TogoVar
TRIML1_chr4_188134441_188152743	188152394	A A	AGTGGAGT others(16): Show AGTGGAGTGGGGTGAGAAGGGGAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0002 a0001c0006t0002	a0001c0006t0002g0126 a0001c0006t0002g0126	1	228	0.0044	23	c.50 others(34): Show c.5022_*5023insGTGGAGTGGGGTGAGAAGGGGAG	TRIML1	ENSG00000184108.8	transcript	ENST00000332517.4	protein_coding		4652		chr4	TogoVar
TRIML1_chr4_188134441_188152743	188152464	G G	GGAGTGAG others(16): Show GGAGTGAGAGTGGGGGTGAGAAGC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0009 a0001c0001t0001g0009	1	228	0.0044	23	c.50 others(34): Show c.5092_*5093insGAGTGAGAGTGGGGGTGAGAAGC	TRIML1	ENSG00000184108.8	transcript	ENST00000332517.4	protein_coding		4722		chr4	TogoVar
TRIML1_chr4_188134441_188152743	188152524	G G	GGGGGAGA others(16): Show GGGGGAGAGAAGGGGAGTGAGAGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01099.hp1 HG02486.hp1 HG01099.hp1 HG02486.hp1	a0002 a0005 a0002 a0005	a0002c0002 a0005c0009 a0002c0002 a0005c0009	a0002c0002t0002 a0005c0009t0001 a0002c0002t0002 a0005c0009t0001	a0002c0002t0002g0157 a0005c0009t0001g0118 a0002c0002t0002g0157 a0005c0009t0001g0118	2	228	0.0088	23	c.51 others(34): Show c.5152_*5153insGGGGAGAGAAGGGGAGTGAGAGA	TRIML1	ENSG00000184108.8	transcript	ENST00000332517.4	protein_coding		4782		chr4	TogoVar
TRIML1_chr4_188134441_188152743	188152524	G G	GGGGGTGA others(16): Show GGGGGTGAGAAGGGGAGGGAGAGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01943.hp2 HG01943.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0033 a0001c0001t0001g0033	1	228	0.0044	23	c.51 others(34): Show c.5152_*5153insGGGGTGAGAAGGGGAGGGAGAGA	TRIML1	ENSG00000184108.8	transcript	ENST00000332517.4	protein_coding		4782		chr4	TogoVar
TRIML1_chr4_188134441_188152743	188152524	G G	GGGGGTGA others(16): Show GGGGGTGAGAAGGGGAGTGAGAGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp2 HG00140.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0151 a0002c0002t0002g0151	1	228	0.0044	23	c.51 others(34): Show c.5152_*5153insGGGGTGAGAAGGGGAGTGAGAGA	TRIML1	ENSG00000184108.8	transcript	ENST00000332517.4	protein_coding		4782		chr4	TogoVar
TRIML1_chr4_188134441_188152743	188152597	G G	GAGGGTGA others(16): Show GAGGGTGAGAAGGGGAGTGAGAGT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18986.hp1 NA18986.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0089 a0001c0001t0001g0089	1	228	0.0044	23	c.52 others(34): Show c.5225_*5226insAGGGTGAGAAGGGGAGTGAGAGT	TRIML1	ENSG00000184108.8	transcript	ENST00000332517.4	protein_coding		4855		chr4	TogoVar
TRIML1_chr4_188134441_188152743	188152631	A A	AGGGGGTG others(16): Show AGGGGGTGAGTGGAGGGTGAGATG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02080.hp1 HG02080.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0163 a0001c0003t0002g0163	1	228	0.0044	23	c.52 others(34): Show c.5259_*5260insGGGGGTGAGTGGAGGGTGAGATG	TRIML1	ENSG00000184108.8	transcript	ENST00000332517.4	protein_coding		4889		chr4	TogoVar
TRIO_chr5_14138342_14515204	14140186	A A	ATTTTTTT others(16): Show ATTTTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01258.hp1 HG01943.hp2 HG02895.hp2 others(1): Show HG01258.hp1 HG01943.hp2 HG02895.hp2 HG03225.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0001c0002 a0006c0046 a0001c0001 a0001c0002 a0006c0046	a0001c0001t0001 a0001c0002t0002 a0001c0002t0004 others(1): Show a0001c0001t0001 a0001c0002t0002 a0001c0002t0004 a0006c0046t0001	a0001c0001t0001g0051 a0001c0002t0002g0057 a0001c0002t0004g0063 others(1): Show a0001c0001t0001g0051 a0001c0002t0002g0057 a0001c0002t0004g0063 a0006c0046t0001g0052	4	198	0.0202	23	c.-35 others(34): Show c.-3540_-3539insTTTTTTTTTTTTTTTTTTTTTTT	TRIO	ENSG00000038382.23	transcript	ENST00000344204.9	protein_coding		3155		chr5	TogoVar
TRIO_chr5_14138342_14515204	14493224	G G	GGAGCGTG others(16): Show GGAGCGTGCGGAGATGTTGGCATA	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02451.hp1 HG02622.hp1 others(3): Show HG01884.hp2 HG02451.hp1 HG02622.hp1 HG03098.hp2 HG03209.hp1 NA19043.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0001c0031 a0007c0041 a0001c0001 a0001c0031 a0007c0041	a0001c0001t0004 a0001c0001t0007 a0001c0001t0012 others(2): Show a0001c0001t0004 a0001c0001t0007 a0001c0001t0012 a0001c0031t0002 a0007c0041t0006	a0001c0001t0004g0007 a0001c0001t0007g0098 a0001c0001t0007g0116 others(3): Show a0001c0001t0004g0007 a0001c0001t0007g0098 a0001c0001t0007g0116 a0001c0001t0012g0006 a0001c0031t0002g0031 a0007c0041t0006g0174	6	198	0.0303	23	c.788 others(40): Show c.7880+413_7880+435dupGCGTGCGGAGATGTTGGCATAGA	TRIO	ENSG00000038382.23	transcript	ENST00000344204.9	protein_coding	49/56		INFO_REALIGN_3_PRIME	chr5	TogoVar
TRIP11_chr14_91960991_92045059	91967135	C C	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02451.hp2 HG06807.hp2 HG02451.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0024 a0001c0004t0024 a0001c0001t0024 a0001c0004t0024	a0001c0001t0024g0092 a0001c0004t0024g0210 a0001c0001t0024g0092 a0001c0004t0024g0210	2	364	0.0055	23	c.25 others(34): Show c.2515_*2537dupAAAAAAAAAAAAAAAAAAAAAAA	TRIP11	ENSG00000100815.12	transcript	ENST00000267622.8	protein_coding	21/21	2537		chr14	TogoVar
TRIP11_chr14_91960991_92045059	92041569	T T	TAAAAAAA others(16): Show TAAAAAAAAAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp1 HG02486.hp1 HG02145.hp1 HG02486.hp1	a0001 a0001	a0001c0010 a0001c0010	a0001c0010t0020 a0001c0010t0051 a0001c0010t0020 a0001c0010t0051	a0001c0010t0020g0176 a0001c0010t0051g0177 a0001c0010t0020g0176 a0001c0010t0051g0177	2	364	0.0055	23	c.-18 others(34): Show c.-1885_-1884insTTTTTTTTTTTTTTTTTTTTTTT	TRIP11	ENSG00000100815.12	transcript	ENST00000267622.8	protein_coding		1511		chr14	TogoVar
TRIP4_chr15_64382836_64460303	64431847	A A	ATATATAT others(16): Show ATATATATATATATATATTTTTTT	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0001	a0001c0005t0001g0197 a0001c0005t0001g0197	1	220	0.0046	23	c.157 others(42): Show c.1575+6217_1575+6218insATATATATATATATATTTTTTTT	TRIP4	ENSG00000103671.10	transcript	ENST00000261884.8	protein_coding	11/12		INFO_REALIGN_3_PRIME	chr15	TogoVar
TRIP6_chr7_100862387_100878454	100877819	C C	CAAGAGTA others(16): Show CAAGAGTACGCATGTGATTGAGTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03704.hp1 HG03704.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0103 a0001c0003t0001g0103	1	432	0.0023	23	c.45 others(34): Show c.4516_*4517insAAGAGTACGCATGTGATTGAGTG	TRIP6	ENSG00000087077.14	transcript	ENST00000200457.9	protein_coding		4366		chr7	TogoVar
TRMT10B_chr9_37748805_37783972	37752199	C C	CCACCCCC others(16): Show CCACCCCCCACCCCCCACCCCCCA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18992.hp1 NA18992.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0029 a0001c0001t0001g0029	1	388	0.0026	23	c.-16 others(34): Show c.-1683_-1682insCACCCCCCACCCCCCACCCCCCA	TRMT10B	ENSG00000165275.10	transcript	ENST00000297994.4	protein_coding		1605		chr9	TogoVar
TRMT10B_chr9_37748805_37783972	37767513	C C	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00621.hp1 HG02647.hp2 others(14): Show HG00423.hp2 HG00621.hp1 HG02647.hp2 HG02723.hp1 HG03579.hp1 HG03579.hp2 HG03688.hp1 HG03688.hp2 NA18522.hp1 NA18950.hp2 NA18957.hp1 NA18965.hp2 NA18980.hp2 NA18988.hp1 NA19043.hp2 NA19062.hp2 NA19088.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0001 a0003c0004t0001 a0001c0001t0001 a0003c0004t0001	a0001c0001t0001g0122 a0001c0001t0001g0126 a0001c0001t0001g0208 others(14): Show a0001c0001t0001g0122 a0001c0001t0001g0126 a0001c0001t0001g0208 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0245 a0001c0001t0001g0246 a0001c0001t0001g0260 a0001c0001t0001g0273 a0001c0001t0001g0276 a0001c0001t0001g0282 a0001c0001t0001g0289 a0001c0001t0001g0297 a0001c0001t0001g0306 a0001c0001t0001g0322 a0001c0001t0001g0327 a0003c0004t0001g0316	17	388	0.0438	23	c.421 others(38): Show c.421-541_421-540insAAAAAAAAAAAAAAAAAAAAAAA	TRMT10B	ENSG00000165275.10	transcript	ENST00000297994.4	protein_coding	4/8		INFO_REALIGN_3_PRIME	chr9	TogoVar
TRMT10B_chr9_37748805_37783972	37777194	C C	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0329 a0001c0001t0009g0329	1	388	0.0026	23	c.845 others(38): Show c.845-391_845-369dupAAAAAAAAAAAAAAAAAAAAAAA	TRMT10B	ENSG00000165275.10	transcript	ENST00000297994.4	protein_coding	8/8		INFO_REALIGN_3_PRIME	chr9	TogoVar
TRMT10C_chr3_101556868_101571446	101561334	G G	GTTTTTTT others(16): Show GTTTTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02622.hp2 NA18979.hp1 NA18984.hp1 others(4): Show HG02622.hp2 NA18979.hp1 NA18984.hp1 NA19004.hp2 NA19011.hp1 NA19085.hp1 NA20300.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0003 a0002c0002t0007 a0002c0002t0001 a0002c0002t0003 a0002c0002t0007	a0002c0002t0001g0004 a0002c0002t0003g0004 a0002c0002t0007g0004 others(1): Show a0002c0002t0001g0004 a0002c0002t0003g0004 a0002c0002t0007g0004 a0002c0002t0007g0016	7	429	0.0163	23	c.-68 others(32): Show c.-682_-681insTTTTTTTTTTTTTTTTTTTTTTT	TRMT10C	ENSG00000174173.7	transcript	ENST00000309922.7	protein_coding		533		chr3	TogoVar
TROAP_chr12_49318255_49336731	49336303	C C	CTCCCTTG others(16): Show CTCCCTTGGCGCCTGGCGGGAAGG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03831.hp2 HG03831.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0061 a0001c0003t0001g0061	1	292	0.0034	23	c.46 others(34): Show c.4686_*4687insTCCCTTGGCGCCTGGCGGGAAGG	TROAP	ENSG00000135451.13	transcript	ENST00000257909.8	protein_coding		4573		chr12	TogoVar
TRPC4AP_chr20_34997404_35097807	35084317	T T	TATTCCTG others(16): Show TATTCCTGACTTCACCACCATGCG	intron_variant intron_variant	MODIFIER	HG03491.hp2 HG03491.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0149 a0001c0001t0002g0149	1	334	0.0030	23	c.169 others(40): Show c.169-6144_169-6143insCGCATGGTGGTGAAGTCAGGAAT	TRPC4AP	ENSG00000100991.12	transcript	ENST00000252015.3	protein_coding	1/18			chr20	TogoVar
TRPC4_chr13_37627063_37874772	37698167	C C	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG00735.hp2 HG01106.hp2 others(31): Show HG00621.hp1 HG00735.hp2 HG01106.hp2 HG01123.hp2 HG01169.hp1 HG01256.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01516.hp2 HG01993.hp1 HG02257.hp2 HG02273.hp1 HG02293.hp2 HG02300.hp2 HG02486.hp1 HG03471.hp2 HG03834.hp2 HG04228.hp1 NA18747.hp2 NA18942.hp2 NA18945.hp2 NA18948.hp2 NA18961.hp1 NA18965.hp1 NA18968.hp2 NA18975.hp1 NA19000.hp2 NA19010.hp1 NA19030.hp1 NA19056.hp2 NA19060.hp2 NA19068.hp1 NA19088.hp2	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0002 a0002c0006 others(2): Show a0001c0001 a0001c0002 a0002c0006 a0002c0009 a0005c0013	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(16): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0037 a0001c0001t0038 a0001c0001t0043 a0001c0001t0044 a0001c0001t0050 a0001c0002t0006 a0002c0006t0006 a0002c0009t0006 a0005c0013t0004	a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0041 others(31): Show a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0041 a0001c0001t0001g0160 a0001c0001t0003g0151 a0001c0001t0004g0072 a0001c0001t0004g0084 a0001c0001t0004g0168 a0001c0001t0005g0051 a0001c0001t0005g0169 a0001c0001t0005g0242 a0001c0001t0006g0034 a0001c0001t0006g0212 a0001c0001t0006g0233 a0001c0001t0006g0281 a0001c0001t0007g0024 a0001c0001t0007g0152 a0001c0001t0008g0155 a0001c0001t0009g0202 a0001c0001t0010g0193 a0001c0001t0010g0266 a0001c0001t0011g0036 a0001c0001t0011g0210 a0001c0001t0037g0018 a0001c0001t0038g0056 a0001c0001t0043g0046 a0001c0001t0044g0035 a0001c0001t0050g0273 a0001c0002t0006g0185 a0001c0002t0006g0218 a0002c0006t0006g0106 a0002c0006t0006g0186 a0002c0009t0006g0135 a0005c0013t0004g0142	34	286	0.1189	23	c.898 others(40): Show c.898-5833_898-5832insAAAAAAAAAAAAAAAAAAAAAAA	TRPC4	ENSG00000133107.15	transcript	ENST00000379705.8	protein_coding	3/10			chr13	TogoVar
TRPC4_chr13_37627063_37874772	37812176	C C	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA19062.hp1 NA19062.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0123 a0001c0001t0004g0123	1	286	0.0035	23	c.-27 others(42): Show c.-27-28817_-27-28816insTTTTTTTTTTTTTTTTTTTTTTT	TRPC4	ENSG00000133107.15	transcript	ENST00000379705.8	protein_coding	1/10			chr13	TogoVar
TRPM3_chr9_70524060_71126621	70786311	C C	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG02809.hp1 HG02965.hp1 others(1): Show HG00738.hp2 HG02809.hp1 HG02965.hp1 HG06807.hp1	a0001 a0001	a0001c0002 a0001c0006 a0001c0037 a0001c0002 a0001c0006 a0001c0037	a0001c0002t0002 a0001c0002t0007 a0001c0006t0001 others(1): Show a0001c0002t0002 a0001c0002t0007 a0001c0006t0001 a0001c0037t0015	a0001c0002t0002g0162 a0001c0002t0007g0197 a0001c0006t0001g0157 others(1): Show a0001c0002t0002g0162 a0001c0002t0007g0197 a0001c0006t0001g0157 a0001c0037t0015g0202	4	214	0.0187	23	c.974 others(40): Show c.974-2055_974-2033dupTTTTTTTTTTTTTTTTTTTTTTT	TRPM3	ENSG00000083067.26	transcript	ENST00000677713.2	protein_coding	6/25			chr9	TogoVar
TRPM3_chr9_70524060_71126621	70921942	A A	ACACACAC others(16): Show ACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0068 a0001c0008t0068	a0001c0008t0068g0211 a0001c0008t0068g0211	1	214	0.0047	23	c.178 others(42): Show c.178-57432_178-57431insGTGTGTGTGTGTGTGTGTGTGTG	TRPM3	ENSG00000083067.26	transcript	ENST00000677713.2	protein_coding	1/25			chr9	TogoVar
TRPM4_chr19_49152792_49216836	49175067	C C	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02683.hp1 NA18999.hp2 NA19060.hp1 others(1): Show HG02683.hp1 NA18999.hp2 NA19060.hp1 NA19090.hp2	a0001 a0020 a0001 a0020	a0001c0002 a0020c0017 a0001c0002 a0020c0017	a0001c0002t0001 a0020c0017t0001 a0001c0002t0001 a0020c0017t0001	a0001c0002t0001g0089 a0001c0002t0001g0091 a0001c0002t0001g0096 others(1): Show a0001c0002t0001g0089 a0001c0002t0001g0091 a0001c0002t0001g0096 a0020c0017t0001g0107	4	312	0.0128	23	c.115 others(42): Show c.1150+2962_1150+2984dupTTTTTTTTTTTTTTTTTTTTTTT	TRPM4	ENSG00000130529.16	transcript	ENST00000252826.10	protein_coding	9/24		INFO_REALIGN_3_PRIME	chr19	TogoVar

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