Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
USP3_chr15_63499593_63599633	63580660	A A	ATATATAT others(16): Show ATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0009 a0002c0002t0009	a0002c0002t0009g0135 a0002c0002t0009g0135	1	88	0.0114	23	c.109 others(42): Show c.1096+6257_1096+6258insTATATATATATATATATATATAT	USP3	ENSG00000140455.17	transcript	ENST00000380324.8	protein_coding	11/14			chr15	TogoVar
USP42_chr7_6099949_6166564	6114678	A A	ATATATAT others(16): Show ATATATATATATATATTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02129.hp2 HG02129.hp2	a0002 a0002	a0002c0006 a0002c0006	a0002c0006t0005 a0002c0006t0005	a0002c0006t0005g0315 a0002c0006t0005g0315	1	84	0.0119	23	c.242 others(38): Show c.242-644_242-643insATATATATATATATTTTTTTTTT	USP42	ENSG00000106346.12	transcript	ENST00000306177.10	protein_coding	2/17		INFO_REALIGN_3_PRIME	chr7	TogoVar
USP45_chr6_99427325_99520423	99473777	A A	ACACACAC others(16): Show ACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01993.hp1 HG01993.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0305 a0003c0003t0001g0305	1	13	0.0769	23	c.933 others(40): Show c.933+2365_933+2366insGTGTGTGTGTGTGTGTGTGTGTG	USP45	ENSG00000123552.18	transcript	ENST00000500704.7	protein_coding	9/17			chr6	TogoVar
USP45_chr6_99427325_99520423	99473802	A A	ACACACAC others(16): Show ACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00735.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0091 a0002c0002t0003g0091	1	400	0.0025	23	c.933 others(40): Show c.933+2340_933+2341insGTGTGTGTGTGTGTGTGTGTGTG	USP45	ENSG00000123552.18	transcript	ENST00000500704.7	protein_coding	9/17			chr6	TogoVar
USP48_chr1_21673298_21788149	21694572	C C	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02027.hp1 HG02027.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0331 a0001c0002t0001g0331	1	125	0.0080	23	c.288 others(40): Show c.2883+471_2883+493dupTTTTTTTTTTTTTTTTTTTTTTT	USP48	ENSG00000090686.16	transcript	ENST00000308271.14	protein_coding	23/26			chr1	TogoVar
USP49_chr6_41784896_41900375	41802428	T T	TTTTATTT others(16): Show TTTTATTTTATTTTATTTTATTTA	intron_variant intron_variant	MODIFIER	HG00280.hp2 NA19090.hp2 HG00280.hp2 NA19090.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0052 a0001c0003t0002g0176 a0001c0003t0002g0052 a0001c0003t0002g0176	2	327	0.0061	23	c.156 others(42): Show c.1561+1377_1561+1378insTAAATAAAATAAAATAAAATAAA	USP49	ENSG00000164663.15	transcript	ENST00000682992.1	protein_coding	5/7			chr6	TogoVar
USP49_chr6_41784896_41900375	41802428	T T	TTTTATTT others(16): Show TTTTATTTTATTTTATTTTTTTTA	intron_variant intron_variant	MODIFIER	NA18954.hp2 NA18954.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0046 a0001c0003t0002g0046	1	326	0.0031	23	c.156 others(42): Show c.1561+1377_1561+1378insTAAAAAAAATAAAATAAAATAAA	USP49	ENSG00000164663.15	transcript	ENST00000682992.1	protein_coding	5/7			chr6	TogoVar
USP50_chr15_50495562_50551666	50525668	A A	ATATGTAT others(16): Show ATATGTATATTATATATGTATATG	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG02145.hp1 HG03195.hp1 HG01167.hp1 HG02145.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0179 a0001c0001t0001g0182 a0001c0001t0001g0373 a0001c0001t0001g0179 a0001c0001t0001g0182 a0001c0001t0001g0373	3	382	0.0079	23	c.936 others(40): Show c.936+4128_936+4129insCATATACATATATAATATACATA	USP50	ENSG00000170236.16	transcript	ENST00000532404.6	protein_coding	6/6			chr15	TogoVar
USP50_chr15_50495562_50551666	50525670	G G	GTGTATAT others(16): Show GTGTATATTATATATGTATATGTA	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02451.hp1 HG03579.hp1 others(2): Show HG01884.hp2 HG02451.hp1 HG03579.hp1 NA19240.hp1 NA21309.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0059 a0002c0003t0001g0060 a0002c0003t0001g0061 others(2): Show a0002c0003t0001g0059 a0002c0003t0001g0060 a0002c0003t0001g0061 a0002c0003t0001g0062 a0002c0003t0001g0063	5	372	0.0134	23	c.936 others(40): Show c.936+4126_936+4127insTACATATACATATATAATATACA	USP50	ENSG00000170236.16	transcript	ENST00000532404.6	protein_coding	6/6			chr15	TogoVar
USP53_chr4_119207713_119300518	119227299	A A	ACACACAC others(16): Show ACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0104 a0001c0001t0013g0104	1	374	0.0027	23	c.-66 others(42): Show c.-664-7991_-664-7990insCACACACACACACACACACACAC	USP53	ENSG00000145390.12	transcript	ENST00000692078.1	protein_coding	3/18			chr4	TogoVar
USP54_chr10_73492538_73596342	73569902	C C	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02071.hp1 HG02071.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0048 a0001c0001t0001g0048	1	20	0.0500	23	c.240 others(40): Show c.240+1496_240+1518dupTTTTTTTTTTTTTTTTTTTTTTT	USP54	ENSG00000166348.20	transcript	ENST00000687698.1	protein_coding	4/23			chr10	TogoVar
USP6NL_chr10_11455510_11616650	11554966	A A	ATTTTTTT others(16): Show ATTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03490.hp1 HG03492.hp1 HG04204.hp2 HG03490.hp1 HG03492.hp1 HG04204.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0008 a0001c0003t0002 a0001c0001t0008 a0001c0003t0002	a0001c0001t0008g0389 a0001c0001t0008g0391 a0001c0003t0002g0388 a0001c0001t0008g0389 a0001c0001t0008g0391 a0001c0003t0002g0388	3	121	0.0248	23	c.5-2 others(38): Show c.5-27400_5-27399insAAAAAAAAAAAAAAAAAAAAAAA	USP6NL	ENSG00000148429.15	transcript	ENST00000609104.6	protein_coding	2/14			chr10	TogoVar
USP7_chr16_8887097_8968906	8897726	A A	AAAAAAAA others(16): Show AAAAAAAAAAAAAAAAAAAAAAAT	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0182 a0001c0001t0001g0182	1	27	0.0370	23	c.271 others(40): Show c.2719-628_2719-627insATTTTTTTTTTTTTTTTTTTTTT	USP7	ENSG00000187555.17	transcript	ENST00000344836.9	protein_coding	25/30			chr16	TogoVar
USP7_chr16_8887097_8968906	8897726	A A	AAAAATAT others(16): Show AAAAATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02132.hp1 HG02132.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0029 a0001c0001t0001g0029	1	27	0.0370	23	c.271 others(40): Show c.2719-628_2719-627insATATATATATATATATATATTTT	USP7	ENSG00000187555.17	transcript	ENST00000344836.9	protein_coding	25/30			chr16	TogoVar
USP8_chr15_50419405_50519421	50445545	C C	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG01192.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0116 a0001c0001t0116	a0001c0001t0116g0358 a0001c0001t0116g0358	1	9	0.1111	23	c.250 others(40): Show c.250-3853_250-3831dupAAAAAAAAAAAAAAAAAAAAAAA	USP8	ENSG00000138592.14	transcript	ENST00000307179.9	protein_coding	3/19		INFO_REALIGN_3_PRIME	chr15	TogoVar
USP8_chr15_50419405_50519421	50450462	C C	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18982.hp1 NA18991.hp2 NA18995.hp2 NA18982.hp1 NA18991.hp2 NA18995.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0014 a0002c0003t0033 a0002c0003t0144 a0002c0003t0014 a0002c0003t0033 a0002c0003t0144	a0002c0003t0014g0080 a0002c0003t0033g0077 a0002c0003t0144g0096 a0002c0003t0014g0080 a0002c0003t0033g0077 a0002c0003t0144g0096	3	119	0.0252	23	c.335 others(39): Show c.335+979_335+1001dupTTTTTTTTTTTTTTTTTTTTTTT	USP8	ENSG00000138592.14	transcript	ENST00000307179.9	protein_coding	4/19		INFO_REALIGN_3_PRIME	chr15	TogoVar
USP9X_chrX_41080445_41241579	41161635	C C	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02148.hp2 HG02293.hp2 HG02818.hp2 HG02148.hp2 HG02293.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0130 a0001c0001t0001g0197 a0001c0001t0001g0204 a0001c0001t0001g0130 a0001c0001t0001g0197 a0001c0001t0001g0204	3	97	0.0309	23	c.189 others(42): Show c.1898-1154_1898-1132dupTTTTTTTTTTTTTTTTTTTTTTT	USP9X	ENSG00000124486.15	transcript	ENST00000378308.7	protein_coding	14/44		INFO_REALIGN_3_PRIME	chrX	TogoVar
UST_chr6_148742030_149081990	148946510	C C	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0049 a0001c0001t0001g0049	1	86	0.0116	23	c.447 others(40): Show c.447+5095_447+5096insAAAAAAAAAAAAAAAAAAAAAAA	UST	ENSG00000111962.8	transcript	ENST00000367463.5	protein_coding	3/7		INFO_REALIGN_3_PRIME	chr6	TogoVar
UTP11_chr1_38007734_38029820	38012048	G G	GTTTTTTT others(16): Show GTTTTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0005 a0001c0001t0004g0005	1	143	0.0070	23	c.-75 others(32): Show c.-755_-754insTTTTTTTTTTTTTTTTTTTTTTT	UTP11	ENSG00000183520.12	transcript	ENST00000373014.5	protein_coding		685		chr1	TogoVar
UTP20_chr12_101275105_101391618	101310577	C C	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0167 a0001c0001t0007g0167	1	89	0.0112	23	c.223 others(40): Show c.2231+759_2231+760insAAAAAAAAAAAAAAAAAAAAAAA	UTP20	ENSG00000120800.5	transcript	ENST00000261637.5	protein_coding	19/61		INFO_REALIGN_3_PRIME	chr12	TogoVar
UTRN_chr6_144280335_144858034	144690095	T T	TTTTTTTT others(16): Show TTTTTTTTTTTTTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG04228.hp1 HG01496.hp2 HG04228.hp1	a0001 a0003 a0001 a0003	a0001c0003 a0003c0015 a0001c0003 a0003c0015	a0001c0003t0002 a0003c0015t0001 a0001c0003t0002 a0003c0015t0001	a0001c0003t0002g0018 a0003c0015t0001g0019 a0001c0003t0002g0018 a0003c0015t0001g0019	2	36	0.0556	23	c.765 others(42): Show c.7653-9991_7653-9990insTTTTTTTTTTTGTGTGTGTGTGT	UTRN	ENSG00000152818.20	transcript	ENST00000367545.8	protein_coding	52/74		INFO_REALIGN_3_PRIME	chr6	TogoVar
UTRN_chr6_144280335_144858034	144690095	T T	TTTTTTTT others(16): Show TTTTTTTTTTTTTTTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00140.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0075 a0001c0001t0004g0075	1	35	0.0286	23	c.765 others(42): Show c.7653-9991_7653-9990insTTTTTTTTTTTTTGTGTGTGTGT	UTRN	ENSG00000152818.20	transcript	ENST00000367545.8	protein_coding	52/74		INFO_REALIGN_3_PRIME	chr6	TogoVar
UTS2B_chr3_191262168_191335526	191267737	A A	AACATTTG others(16): Show AACATTTGTATGTAGAAGTACAGT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00741.hp1 HG00741.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0063 a0002c0002t0063	a0002c0002t0063g0156 a0002c0002t0063g0156	1	400	0.0025	23	c.65 others(32): Show c.656_*678dupACTGTACTTCTACATACAAATGT	UTS2B	ENSG00000188958.10	transcript	ENST00000340524.10	protein_coding	9/9	678		chr3	TogoVar
UVRAG_chr11_75810210_76149232	75979580	G G	GCGCCCCT others(16): Show GCGCCCCTCCCCCAGCCTCGCTGC	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0031 a0002c0002t0031	a0002c0002t0031g0081 a0002c0002t0031g0081	1	144	0.0069	23	c.700 others(40): Show c.700-3802_700-3780dupCCTCCCCCAGCCTCGCTGCCGCC	UVRAG	ENSG00000198382.9	transcript	ENST00000356136.8	protein_coding	7/14		INFO_REALIGN_3_PRIME	chr11	TogoVar
UVSSA_chr4_1342208_1393049	1372750	T T	TGCACTCA others(16): Show TGCACTCACCTCCCGCGTCTCAGG	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG02040.hp1 HG03491.hp1 others(1): Show HG01192.hp2 HG02040.hp1 HG03491.hp1 HG03492.hp1	a0003 a0007 a0003 a0007	a0003c0009 a0007c0011 a0003c0009 a0007c0011	a0003c0009t0002 a0007c0011t0015 a0003c0009t0002 a0007c0011t0015	a0003c0009t0002g0038 a0007c0011t0015g0039 a0007c0011t0015g0336 a0003c0009t0002g0038 a0007c0011t0015g0039 a0007c0011t0015g0336	4	387	0.0103	23	c.128 others(42): Show c.1289-2595_1289-2573dupTCAGGGCACTCACCTCCCGCGTC	UVSSA	ENSG00000163945.19	transcript	ENST00000389851.10	protein_coding	8/13		INFO_REALIGN_3_PRIME	chr4	TogoVar
UVSSA_chr4_1342208_1393049	1372794	T T	TGCACTCA others(16): Show TGCACTCACCTCCCGCGTCTCAGG	intron_variant intron_variant	MODIFIER	HG03942.hp2 HG03942.hp2	a0003 a0003	a0003c0002 a0003c0002	a0003c0002t0002 a0003c0002t0002	a0003c0002t0002g0219 a0003c0002t0002g0219	1	336	0.0030	23	c.128 others(42): Show c.1289-2528_1289-2506dupTCAGGGCACTCACCTCCCGCGTC	UVSSA	ENSG00000163945.19	transcript	ENST00000389851.10	protein_coding	8/13		INFO_REALIGN_3_PRIME	chr4	TogoVar
UVSSA_chr4_1342208_1393049	1372861	T T	TGCACTCA others(16): Show TGCACTCACCTCCCGCGTCTCAGG	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00741.hp2 HG01175.hp1 others(14): Show HG00639.hp1 HG00741.hp2 HG01175.hp1 HG01192.hp2 HG01515.hp1 HG01517.hp1 HG03490.hp1 HG03492.hp2 HG03688.hp1 HG03831.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp2 NA19002.hp2 NA19011.hp2 NA19057.hp1 NA19077.hp2	a0003 a0003	a0003c0002 a0003c0009 a0003c0034 a0003c0002 a0003c0009 a0003c0034	a0003c0002t0002 a0003c0002t0023 a0003c0009t0002 others(1): Show a0003c0002t0002 a0003c0002t0023 a0003c0009t0002 a0003c0034t0002	a0003c0002t0002g0009 a0003c0002t0002g0030 a0003c0002t0002g0178 others(11): Show a0003c0002t0002g0009 a0003c0002t0002g0030 a0003c0002t0002g0178 a0003c0002t0002g0194 a0003c0002t0002g0195 a0003c0002t0002g0202 a0003c0002t0002g0203 a0003c0002t0002g0204 a0003c0002t0002g0224 a0003c0002t0002g0272 a0003c0002t0023g0008 a0003c0009t0002g0020 a0003c0009t0002g0038 a0003c0034t0002g0008	17	354	0.0480	23	c.128 others(42): Show c.1289-2482_1289-2460dupAGGGCACTCACCTCCCGCGTCTC	UVSSA	ENSG00000163945.19	transcript	ENST00000389851.10	protein_coding	8/13		INFO_REALIGN_3_PRIME	chr4	TogoVar
VAC14_chr16_70682439_70806158	70760962	G G	GTGTGTGT others(16): Show GTGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0004	a0001c0003t0004g0306 a0001c0003t0004g0306	1	80	0.0125	23	c.137 others(42): Show c.1371+1577_1371+1578insACACACACACACACACACACACA	VAC14	ENSG00000103043.15	transcript	ENST00000261776.10	protein_coding	12/18			chr16	TogoVar
VAMP4_chr1_171695160_171747065	171741914	G G	GGCTCCCG others(16): Show GGCTCCCGGGGAACTCCCGGCAGC	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00140.hp2 HG00280.hp2 HG00323.hp2 others(60): Show HG00140.hp2 HG00280.hp2 HG00323.hp2 HG00558.hp1 HG00558.hp2 HG00621.hp2 HG00733.hp2 HG00738.hp1 HG00738.hp2 HG01069.hp1 HG01099.hp2 HG01175.hp1 HG01346.hp1 HG01361.hp2 HG01496.hp2 HG01515.hp1 HG01517.hp2 HG01891.hp1 HG01993.hp1 HG02004.hp1 HG02040.hp2 HG02056.hp1 HG02071.hp2 HG02135.hp1 HG02258.hp1 HG02273.hp1 HG02293.hp2 HG02735.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp2 HG02965.hp2 HG03041.hp1 HG03491.hp2 HG03492.hp2 HG06807.hp1 NA18940.hp2 NA18949.hp2 NA18950.hp1 NA18954.hp1 NA18955.hp1 NA18960.hp1 NA18967.hp1 NA18968.hp1 NA18970.hp1 NA18971.hp2 NA18972.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp1 NA18982.hp1 NA18987.hp2 NA18991.hp1 NA19056.hp2 NA19058.hp1 NA19060.hp1 NA19065.hp1 NA19082.hp1 NA19083.hp1 NA19085.hp2 NA19091.hp1 NA20805.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0015 a0001c0001t0016 others(14): Show a0001c0001t0002 a0001c0001t0015 a0001c0001t0016 a0001c0001t0025 a0001c0001t0026 a0001c0001t0032 a0001c0001t0033 a0001c0001t0034 a0001c0001t0046 a0001c0001t0047 a0001c0001t0048 a0001c0001t0049 a0001c0001t0050 a0001c0001t0051 a0001c0001t0052 a0001c0001t0053 a0001c0001t0054	a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0006 others(41): Show a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0006 a0001c0001t0002g0007 a0001c0001t0002g0017 a0001c0001t0002g0019 a0001c0001t0002g0054 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0065 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0070 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0079 a0001c0001t0015g0050 a0001c0001t0015g0055 a0001c0001t0015g0066 a0001c0001t0015g0072 a0001c0001t0015g0078 a0001c0001t0016g0016 a0001c0001t0016g0056 a0001c0001t0016g0058 a0001c0001t0016g0076 a0001c0001t0025g0048 a0001c0001t0025g0049 a0001c0001t0025g0080 a0001c0001t0026g0021 a0001c0001t0026g0081 a0001c0001t0032g0052 a0001c0001t0032g0069 a0001c0001t0033g0018 a0001c0001t0034g0020 a0001c0001t0046g0057 a0001c0001t0047g0063 a0001c0001t0048g0071 a0001c0001t0049g0064 a0001c0001t0050g0051 a0001c0001t0051g0077 a0001c0001t0052g0053 a0001c0001t0053g0075 a0001c0001t0054g0059	63	364	0.1731	23	c.-77 others(30): Show c.-77_-55dupGCTGCCGGGAGTTCCCCGGGAGC	VAMP4	ENSG00000117533.15	transcript	ENST00000236192.12	protein_coding	1/8	3501		chr1	TogoVar
VCX2_chrX_8164944_8176267	8169413	C C	CCCCACAC others(16): Show CCCCACACACCACCTCTCCTCCCT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02683.hp1 HG02683.hp1	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0002 a0005c0005t0002	a0005c0005t0002g0007 a0005c0005t0002g0007	1	113	0.0088	23	c.61 others(32): Show c.618_*619insAGGGAGGAGAGGTGGTGTGTGGG	VCX2	ENSG00000177504.10	transcript	ENST00000317103.5	protein_coding		530		chrX	TogoVar
VCX3A_chrX_6528618_6540118	6532878	C C	CTCCTCCC others(16): Show CTCCTCCCTCCCCACACACCTCCT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19056.hp1 NA19056.hp1	a0022 a0022	a0022c0018 a0022c0018	a0022c0018t0002 a0022c0018t0002	a0022c0018t0002g0039 a0022c0018t0002g0039	1	72	0.0139	23	c.86 others(32): Show c.866_*867insAGGAGGTGTGTGGGGAGGGAGGA	VCX3A	ENSG00000169059.13	transcript	ENST00000381089.7	protein_coding		739		chrX	TogoVar
VCX3A_chrX_6528618_6540118	6532911	C C	CTCTCCCT others(16): Show CTCTCCCTCCCCCACACACCACCT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19056.hp1 NA19056.hp1	a0022 a0022	a0022c0018 a0022c0018	a0022c0018t0002 a0022c0018t0002	a0022c0018t0002g0039 a0022c0018t0002g0039	1	72	0.0139	23	c.83 others(32): Show c.833_*834insAGGTGGTGTGTGGGGGAGGGAGA	VCX3A	ENSG00000169059.13	transcript	ENST00000381089.7	protein_coding		706		chrX	TogoVar
VCX3B_chrX_8459830_8471510	8467175	T T	TGTGTGGG others(16): Show TGTGTGGGGAGGGAGGGAGGAAGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01517.hp1 HG03516.hp2 HG01517.hp1 HG03516.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0003 a0003c0003t0001 a0001c0001t0003 a0003c0003t0001	a0001c0001t0003g0032 a0003c0003t0001g0004 a0001c0001t0003g0032 a0003c0003t0001g0004	2	196	0.0102	23	c.79 others(32): Show c.792_*793insGTGTGGGGAGGGAGGGAGGAAGA	VCX3B	ENSG00000205642.11	transcript	ENST00000381032.6	protein_coding		666		chrX	TogoVar
VCX_chrX_7838171_7849143	7844275	A A	AGGGAGGG others(16): Show AGGGAGGGAGGAAGAGGTGTGTGG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18967.hp1 NA18967.hp1	a0007 a0007	a0007c0008 a0007c0008	a0007c0008t0003 a0007c0008t0003	a0007c0008t0003g0002 a0007c0008t0003g0002	1	282	0.0035	23	c.25 others(32): Show c.259_*260insGGGAGGGAGGAAGAGGTGTGTGG	VCX	ENSG00000182583.13	transcript	ENST00000688183.1	protein_coding		133		chrX	TogoVar
VCX_chrX_7838171_7849143	7844325	T T	TGTGTGGG others(16): Show TGTGTGGGGAGGGAGGGAGGAAGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02040.hp1 HG02040.hp1	a0002 a0002	a0002c0006 a0002c0006	a0002c0006t0003 a0002c0006t0003	a0002c0006t0003g0002 a0002c0006t0003g0002	1	291	0.0034	23	c.30 others(32): Show c.309_*310insGTGTGGGGAGGGAGGGAGGAAGA	VCX	ENSG00000182583.13	transcript	ENST00000688183.1	protein_coding		183		chrX	TogoVar
VDR_chr12_47836537_47909994	47871292	C C	CTCTTTCT others(16): Show CTCTTTCTTCTTTCTTTCTTTCTT	intron_variant intron_variant	MODIFIER	NA19057.hp2 NA19057.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0236 a0001c0001t0001g0236	1	33	0.0303	23	c.147 others(40): Show c.147-6116_147-6115insAAGAAAGAAAGAAAGAAGAAAGA	VDR	ENSG00000111424.12	transcript	ENST00000549336.6	protein_coding	3/9			chr12	TogoVar
VDR_chr12_47836537_47909994	47904462	T T	TAAAAAAA others(16): Show TAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01081.hp2 HG01074.hp2 HG01081.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0012 a0002c0002t0023 a0002c0002t0012 a0002c0002t0023	a0002c0002t0012g0024 a0002c0002t0023g0023 a0002c0002t0012g0024 a0002c0002t0023g0023	2	129	0.0155	23	c.-84 others(38): Show c.-84+470_-84+492dupTTTTTTTTTTTTTTTTTTTTTTT	VDR	ENSG00000111424.12	transcript	ENST00000549336.6	protein_coding	1/9			chr12	TogoVar
VEGFB_chr11_64229584_64244264	64237126	G G	GACAGAGA others(16): Show GACAGAGACAGACAGAGACAGACA	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG00733.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	221	0.0045	23	c.375 others(36): Show c.375-61_375-60insACAGAGACAGACAGAGACAGACA	VEGFB	ENSG00000173511.10	transcript	ENST00000309422.7	protein_coding	4/6			chr11	TogoVar
VEGFC_chr4_176678538_176797922	176768513	T T	TATATATA others(16): Show TATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02015.hp1 HG02015.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0023 a0001c0001t0001g0023	1	214	0.0047	23	c.147 others(42): Show c.147+23651_147+23652insTATATATATATATATATATATAT	VEGFC	ENSG00000150630.4	transcript	ENST00000618562.2	protein_coding	1/6			chr4	TogoVar
VEGFD_chrX_15340596_15389413	15368107	G G	GGAAAGAA others(16): Show GGAAAGAAAGAAAGGAGAGAAAGA	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0147 a0001c0001t0001g0147	1	289	0.0035	23	c.91- others(38): Show c.91-4811_91-4789dupTCTTTCTCTCCTTTCTTTCTTTC	VEGFD	ENSG00000165197.5	transcript	ENST00000297904.4	protein_coding	1/6			chrX	TogoVar
VEPH1_chr3_157254742_157508416	157304019	T T	TATATATA others(16): Show TATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03688.hp1 HG03704.hp2 NA18959.hp2 others(2): Show HG03688.hp1 HG03704.hp2 NA18959.hp2 NA19001.hp2 NA19076.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0007 a0001c0001t0001 a0001c0001t0007	a0001c0001t0001g0070 a0001c0001t0001g0259 a0001c0001t0001g0268 others(2): Show a0001c0001t0001g0070 a0001c0001t0001g0259 a0001c0001t0001g0268 a0001c0001t0001g0281 a0001c0001t0007g0231	5	260	0.0192	23	c.201 others(42): Show c.2010+9601_2010+9602insTATATATATATATATATATATAT	VEPH1	ENSG00000197415.12	transcript	ENST00000362010.7	protein_coding	11/13			chr3	TogoVar
VEPH1_chr3_157254742_157508416	157369180	G G	GAAAAAAA others(16): Show GAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG03471.hp1 NA18970.hp2 others(2): Show HG02109.hp2 HG03471.hp1 NA18970.hp2 NA18973.hp1 NA19060.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0007 a0001c0001 a0004c0007	a0001c0001t0001 a0001c0001t0002 a0004c0007t0001 a0001c0001t0001 a0001c0001t0002 a0004c0007t0001	a0001c0001t0001g0243 a0001c0001t0002g0209 a0004c0007t0001g0284 others(2): Show a0001c0001t0001g0243 a0001c0001t0002g0209 a0004c0007t0001g0284 a0004c0007t0001g0285 a0004c0007t0001g0286	5	66	0.0758	23	c.112 others(42): Show c.1128-4691_1128-4669dupTTTTTTTTTTTTTTTTTTTTTTT	VEPH1	ENSG00000197415.12	transcript	ENST00000362010.7	protein_coding	7/13			chr3	TogoVar
VGLL2_chr6_117260558_117278565	117273683	T T	TTAGATAG others(16): Show TTAGATAGATAGATAGATAGATAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG01243.hp1 HG01256.hp2 others(14): Show HG00099.hp1 HG01243.hp1 HG01256.hp2 HG01993.hp1 HG02559.hp1 HG02647.hp1 HG03239.hp1 HG03540.hp2 HG03579.hp2 HG06807.hp1 NA18906.hp2 NA19030.hp1 NA19081.hp1 NA19240.hp1 NA20905.hp1 NA20905.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0012 a0001c0002t0002 a0001c0001t0001 a0001c0001t0012 a0001c0002t0002	a0001c0001t0001g0003 a0001c0001t0001g0008 a0001c0001t0001g0020 others(5): Show a0001c0001t0001g0003 a0001c0001t0001g0008 a0001c0001t0001g0020 a0001c0001t0001g0034 a0001c0001t0001g0058 a0001c0001t0012g0003 a0001c0002t0002g0005 a0001c0002t0002g0011	17	299	0.0569	23	c.11 others(34): Show c.1189_*1190insTAGATAGATAGATAGATAGATAG	VGLL2	ENSG00000170162.14	transcript	ENST00000326274.6	protein_coding		119		chr6	TogoVar
VHLL_chr1_156293624_156304307	156296579	A A	AAATATAT others(16): Show AAATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03239.hp1 HG03239.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	194	0.0052	23	c.21 others(34): Show c.2190_*2191insATATATATATATATATATATATT	VHLL	ENSG00000189030.10	transcript	ENST00000339922.5	protein_coding		2044		chr1	TogoVar
VIPR1_chr3_42497643_42542568	42522101	A A	ATATATAT others(16): Show ATATATATATATATATATATATTT	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0006 a0001c0004t0006	a0001c0004t0006g0052 a0001c0004t0006g0052	1	206	0.0049	23	c.292 others(40): Show c.292+2772_292+2773insATATATATATATATATATATTTT	VIPR1	ENSG00000114812.13	transcript	ENST00000325123.5	protein_coding	3/12		INFO_REALIGN_3_PRIME	chr3	TogoVar
VMAC_chr19_5899872_5915853	5907610	T T	TAAAAAAA others(16): Show TAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00609.hp1 HG00609.hp2 others(38): Show HG00423.hp2 HG00609.hp1 HG00609.hp2 HG00642.hp2 HG00733.hp2 HG01109.hp2 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01978.hp1 HG01978.hp2 HG02055.hp1 HG02083.hp1 HG02165.hp1 HG02165.hp2 HG02300.hp2 HG02486.hp1 HG02630.hp1 HG02922.hp1 HG03139.hp2 HG03195.hp2 HG03492.hp1 HG03669.hp2 HG03704.hp2 HG03831.hp1 HG03942.hp1 HG04228.hp1 NA18947.hp1 NA18955.hp1 NA18961.hp1 NA18963.hp2 NA18967.hp1 NA18970.hp1 NA18978.hp1 NA18987.hp1 NA19005.hp1 NA19009.hp1 NA19056.hp1 NA19065.hp1 NA19079.hp1 NA19079.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(4): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0015 a0001c0001t0021 a0001c0001t0032 a0001c0001t0036	a0001c0001t0001g0002 a0001c0001t0001g0054 a0001c0001t0001g0068 others(8): Show a0001c0001t0001g0002 a0001c0001t0001g0054 a0001c0001t0001g0068 a0001c0001t0001g0083 a0001c0001t0003g0090 a0001c0001t0005g0002 a0001c0001t0005g0028 a0001c0001t0015g0002 a0001c0001t0021g0052 a0001c0001t0032g0002 a0001c0001t0036g0002	41	95	0.4316	23	c.192 others(40): Show c.192-1210_192-1188dupAAAAAAAAAAAAAAAAAAAAAAA	VMAC	ENSG00000187650.4	transcript	ENST00000339485.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr19	TogoVar
VMP1_chr17_59702654_59847255	59772950	C C	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02896.hp2 NA18987.hp1 NA19080.hp2 others(1): Show HG02896.hp2 NA18987.hp1 NA19080.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0122 a0001c0001t0003g0142 a0001c0001t0003g0259 others(1): Show a0001c0001t0003g0122 a0001c0001t0003g0142 a0001c0001t0003g0259 a0001c0001t0003g0260	4	20	0.2000	23	c.583 others(38): Show c.583-796_583-774dupTTTTTTTTTTTTTTTTTTTTTTT	VMP1	ENSG00000062716.13	transcript	ENST00000262291.9	protein_coding	6/11		INFO_REALIGN_3_PRIME	chr17	TogoVar
VN1R1_chr19_57449790_57462140	57457969	T T	TGTGTGTG others(16): Show TGTGTGTGTGTGTGTGTGTGTGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00735.hp1 NA20905.hp1 HG00735.hp1 NA20905.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0002c0002t0001 a0001c0001t0002 a0002c0002t0001	a0001c0001t0002g0000 a0002c0002t0001g0000 a0001c0001t0002g0000 a0002c0002t0001g0000	2	413	0.0048	23	c.-14 others(34): Show c.-1484_-1483insCACACACACACACACACACACAC	VN1R1	ENSG00000178201.5	transcript	ENST00000321039.5	protein_coding		830		chr19	TogoVar
VPS13A_chr9_77172534_77426537	77411660	C C	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0004	a0001c0003t0004g0240 a0001c0003t0004g0240	1	87	0.0115	23	c.947 others(42): Show c.9474+4056_9474+4078dupAAAAAAAAAAAAAAAAAAAAAAA	VPS13A	ENSG00000197969.14	transcript	ENST00000360280.8	protein_coding	71/71		INFO_REALIGN_3_PRIME	chr9	TogoVar
VPS13B_chr8_99008274_99882580	99035093	C C	CTGAGGTG others(16): Show CTGAGGTGGGAGAGCCCAGGAGTT	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00642.hp1 HG00741.hp2 others(2): Show HG00323.hp1 HG00642.hp1 HG00741.hp2 HG01515.hp1 HG01517.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0001 a0001c0002t0002 others(1): Show a0001c0001t0002 a0001c0002t0001 a0001c0002t0002 a0001c0002t0009	a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0002t0001g0047 others(2): Show a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0002t0001g0047 a0001c0002t0002g0046 a0001c0002t0009g0045	5	132	0.0379	23	c.148 others(40): Show c.148-3323_148-3301dupGGGAGAGCCCAGGAGTTTGAGGT	VPS13B	ENSG00000132549.20	transcript	ENST00000357162.7	protein_coding	2/61		INFO_REALIGN_3_PRIME	chr8	TogoVar

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