Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
GRIP1_chr12_66342431_66684076	66363229	A A	ATATATAT others(16): Show ATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02083.hp2 HG02083.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0183 a0001c0001t0001g0183	1	224	0.0045	23	c.301 others(42): Show c.3012+8464_3012+8465insATATATATATATATATATATATA	GRIP1	ENSG00000155974.14	transcript	ENST00000359742.9	protein_coding	23/24			chr12	TogoVar
GRK2_chr11_67261473_67291556	67274495	C C	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG00597.hp1 HG01081.hp1 others(12): Show HG00544.hp1 HG00597.hp1 HG01081.hp1 HG01978.hp2 HG02132.hp1 HG02135.hp2 HG02809.hp2 HG03540.hp1 NA18963.hp1 NA18969.hp1 NA18974.hp1 NA18984.hp2 NA19030.hp2 NA19066.hp2 NA19089.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0128 others(6): Show a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0128 a0001c0001t0001g0131 a0001c0002t0001g0017 a0001c0002t0001g0023 a0001c0002t0001g0033 a0001c0002t0001g0104 a0001c0002t0001g0142	15	302	0.0497	23	c.114 others(40): Show c.114-2772_114-2750dupTTTTTTTTTTTTTTTTTTTTTTT	GRK2	ENSG00000173020.11	transcript	ENST00000308595.10	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr11	TogoVar
GRK4_chr4_2958571_3045760	2988075	C C	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01928.hp2 HG02451.hp1 others(9): Show HG01099.hp1 HG01928.hp2 HG02451.hp1 HG02886.hp2 HG02965.hp1 HG03225.hp1 NA18522.hp2 NA18953.hp1 NA18972.hp1 NA18979.hp1 NA19079.hp1 NA19082.hp2	a0003 a0004 a0006 others(2): Show a0003 a0004 a0006 a0012 a0014	a0003c0003 a0004c0005 a0006c0006 others(2): Show a0003c0003 a0004c0005 a0006c0006 a0012c0017 a0014c0023	a0003c0003t0002 a0004c0005t0002 a0006c0006t0002 others(2): Show a0003c0003t0002 a0004c0005t0002 a0006c0006t0002 a0012c0017t0002 a0014c0023t0002	a0003c0003t0002g0040 a0003c0003t0002g0195 a0003c0003t0002g0196 others(9): Show a0003c0003t0002g0040 a0003c0003t0002g0195 a0003c0003t0002g0196 a0003c0003t0002g0198 a0003c0003t0002g0243 a0004c0005t0002g0029 a0004c0005t0002g0033 a0004c0005t0002g0034 a0006c0006t0002g0179 a0006c0006t0002g0201 a0012c0017t0002g0257 a0014c0023t0002g0190	12	268	0.0448	23	c.149 others(38): Show c.149-650_149-628dupAAAAAAAAAAAAAAAAAAAAAAA	GRK4	ENSG00000125388.20	transcript	ENST00000398052.9	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr4	TogoVar
GRK5_chr10_119202571_119464745	119382188	C C	CAGGCTCT others(16): Show CAGGCTCTGCCTTGGGCTTAGGGG	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00733.hp2 HG00741.hp2 others(32): Show HG00140.hp2 HG00733.hp2 HG00741.hp2 HG01074.hp2 HG01167.hp1 HG01258.hp2 HG01496.hp2 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG02027.hp2 HG02055.hp1 HG02056.hp2 HG02630.hp1 HG02683.hp1 HG02683.hp2 HG02698.hp2 HG03017.hp2 HG03130.hp1 HG03239.hp1 HG03471.hp2 HG03579.hp2 HG03710.hp2 HG03834.hp1 HG04115.hp2 HG04184.hp1 HG04199.hp1 HG06807.hp1 HG06807.hp2 NA18969.hp1 NA19065.hp1 NA19070.hp1 NA19088.hp1 NA20300.hp2 NA21309.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0004 a0002c0003 others(1): Show a0001c0001 a0001c0004 a0002c0003 a0003c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(19): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0019 a0001c0001t0022 a0001c0001t0024 a0001c0001t0045 a0001c0001t0051 a0001c0001t0068 a0001c0001t0074 a0001c0001t0077 a0001c0001t0081 a0001c0001t0082 a0001c0004t0011 a0002c0003t0013 a0002c0003t0070 a0002c0003t0078 a0003c0002t0003 a0003c0002t0060	a0001c0001t0001g0018 a0001c0001t0001g0024 a0001c0001t0001g0194 others(32): Show a0001c0001t0001g0018 a0001c0001t0001g0024 a0001c0001t0001g0194 a0001c0001t0002g0008 a0001c0001t0002g0012 a0001c0001t0002g0040 a0001c0001t0002g0042 a0001c0001t0002g0122 a0001c0001t0002g0183 a0001c0001t0003g0124 a0001c0001t0004g0038 a0001c0001t0004g0093 a0001c0001t0004g0112 a0001c0001t0005g0007 a0001c0001t0006g0019 a0001c0001t0006g0092 a0001c0001t0006g0155 a0001c0001t0006g0169 a0001c0001t0019g0177 a0001c0001t0022g0094 a0001c0001t0024g0091 a0001c0001t0024g0167 a0001c0001t0045g0180 a0001c0001t0051g0009 a0001c0001t0068g0159 a0001c0001t0074g0144 a0001c0001t0077g0164 a0001c0001t0081g0195 a0001c0001t0082g0027 a0001c0004t0011g0059 a0002c0003t0013g0104 a0002c0003t0070g0152 a0002c0003t0078g0153 a0003c0002t0003g0116 a0003c0002t0060g0173	35	202	0.1733	23	c.261 others(40): Show c.261+1303_261+1325dupAGGGGAGGCTCTGCCTTGGGCTT	GRK5	ENSG00000198873.12	transcript	ENST00000392870.3	protein_coding	3/15		INFO_REALIGN_3_PRIME	chr10	TogoVar
GRK5_chr10_119202571_119464745	119451082	A A	ATCGTCCC others(16): Show ATCGTCCCTGCCAGCCCCCCACCG	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG03579.hp2 HG04228.hp2 HG01243.hp1 HG03579.hp2 HG04228.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0072 a0001c0001t0086 a0002c0003t0070 a0001c0001t0072 a0001c0001t0086 a0002c0003t0070	a0001c0001t0072g0140 a0001c0001t0086g0154 a0002c0003t0070g0152 a0001c0001t0072g0140 a0001c0001t0086g0154 a0002c0003t0070g0152	3	202	0.0149	23	c.140 others(42): Show c.1405-1567_1405-1545dupCGTCGTCCCTGCCAGCCCCCCAC	GRK5	ENSG00000198873.12	transcript	ENST00000392870.3	protein_coding	13/15		INFO_REALIGN_3_PRIME	chr10	TogoVar
GRK7_chr3_141758408_141824352	141777322	C C	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG00639.hp2 HG03453.hp2 HG00621.hp2 HG00639.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0011 a0001c0001t0001 a0001c0001t0011	a0001c0001t0001g0084 a0001c0001t0001g0231 a0001c0001t0011g0218 a0001c0001t0001g0084 a0001c0001t0001g0231 a0001c0001t0011g0218	3	358	0.0084	23	c.-11 others(40): Show c.-113-830_-113-829insTTTTTTTTTTTTTTTTTTTTTTT	GRK7	ENSG00000114124.3	transcript	ENST00000682958.1	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRK7_chr3_141758408_141824352	141823440	A A	ATTTTTTT others(16): Show ATTTTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00741.hp2 HG01074.hp1 HG00741.hp2 HG01074.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0012 a0003c0003t0004 a0001c0001t0012 a0003c0003t0004	a0001c0001t0012g0256 a0003c0003t0004g0029 a0001c0001t0012g0256 a0003c0003t0004g0029	2	358	0.0056	23	c.63 others(34): Show c.6390_*6391insTTTTTTTTTTTTTTTTTTTTTTT	GRK7	ENSG00000114124.3	transcript	ENST00000682958.1	protein_coding		4089		chr3	TogoVar
GRM1_chr6_146024062_146442601	146146103	C C	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG01433.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0041 a0002c0002t0003g0041	1	158	0.0063	23	c.701 others(42): Show c.701-13231_701-13209dupTTTTTTTTTTTTTTTTTTTTTTT	GRM1	ENSG00000152822.15	transcript	ENST00000282753.6	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr6	TogoVar
GRM1_chr6_146024062_146442601	146396093	T T	TATCTATC others(16): Show TATCTATCTATCTATCTATCTATC	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02922.hp2 HG02486.hp1 HG02922.hp2	a0001 a0001	a0001c0006 a0001c0008 a0001c0006 a0001c0008	a0001c0006t0032 a0001c0008t0009 a0001c0006t0032 a0001c0008t0009	a0001c0006t0032g0080 a0001c0008t0009g0092 a0001c0006t0032g0080 a0001c0008t0009g0092	2	158	0.0127	23	c.173 others(42): Show c.1730-2665_1730-2664insTATCTATCTATCATCTATCTATC	GRM1	ENSG00000152822.15	transcript	ENST00000282753.6	protein_coding	6/7		INFO_REALIGN_3_PRIME	chr6	TogoVar
GRM5_chr11_88499642_89070982	88570571	A A	ATATATAT others(16): Show ATATATATATATATATATATATTT	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0020	a0001c0001t0020g0144 a0001c0001t0020g0144	1	184	0.0054	23	c.169 others(42): Show c.1691-2580_1691-2579insAAATATATATATATATATATATA	GRM5	ENSG00000168959.15	transcript	ENST00000305447.5	protein_coding	7/9			chr11	TogoVar
GRM5_chr11_88499642_89070982	88570571	A A	ATATATAT others(16): Show ATATATATATATATATATATTTTT	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp2 NA18906.hp1 HG03041.hp1 HG03041.hp2 NA18906.hp1	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0003c0015 a0004c0012 a0001c0001 a0003c0015 a0004c0012	a0001c0001t0025 a0003c0015t0001 a0004c0012t0026 a0001c0001t0025 a0003c0015t0001 a0004c0012t0026	a0001c0001t0025g0070 a0003c0015t0001g0018 a0004c0012t0026g0016 a0001c0001t0025g0070 a0003c0015t0001g0018 a0004c0012t0026g0016	3	184	0.0163	23	c.169 others(42): Show c.1691-2580_1691-2579insAAAAATATATATATATATATATA	GRM5	ENSG00000168959.15	transcript	ENST00000305447.5	protein_coding	7/9			chr11	TogoVar
GRM5_chr11_88499642_89070982	88570571	A A	ATATATAT others(16): Show ATATATATATATATATTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0169 a0001c0001t0004g0169	1	184	0.0054	23	c.169 others(42): Show c.1691-2580_1691-2579insAAAAAAAAATATATATATATATA	GRM5	ENSG00000168959.15	transcript	ENST00000305447.5	protein_coding	7/9			chr11	TogoVar
GRM5_chr11_88499642_89070982	88681565	C C	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18956.hp1 NA18989.hp2 NA19068.hp2 NA18956.hp1 NA18989.hp2 NA19068.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0036 a0001c0001t0002 a0001c0001t0036	a0001c0001t0002g0042 a0001c0001t0002g0063 a0001c0001t0036g0181 a0001c0001t0002g0042 a0001c0001t0002g0063 a0001c0001t0036g0181	3	184	0.0163	23	c.912 others(42): Show c.912-28185_912-28163dupAAAAAAAAAAAAAAAAAAAAAAA	GRM5	ENSG00000168959.15	transcript	ENST00000305447.5	protein_coding	3/9			chr11	TogoVar
GRM5_chr11_88499642_89070982	88838084	C C	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18986.hp2 NA18986.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0145 a0001c0001t0002g0145	1	184	0.0054	23	c.911 others(42): Show c.911+11799_911+11821dupTTTTTTTTTTTTTTTTTTTTTTT	GRM5	ENSG00000168959.15	transcript	ENST00000305447.5	protein_coding	3/9			chr11	TogoVar
GRM5_chr11_88499642_89070982	88845423	C C	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0104 a0001c0001t0007g0104	1	184	0.0054	23	c.911 others(40): Show c.911+4460_911+4482dupAAAAAAAAAAAAAAAAAAAAAAA	GRM5	ENSG00000168959.15	transcript	ENST00000305447.5	protein_coding	3/9			chr11	TogoVar
GRM7_chr3_6856115_7746533	6961875	G G	GAGGTATA others(16): Show GAGGTATAAACATACTACACTACA	intron_variant intron_variant	MODIFIER	NA18974.hp2 NA18974.hp2	a0001 a0001	a0001c0017 a0001c0017	a0001c0017t0001 a0001c0017t0001	a0001c0017t0001g0041 a0001c0017t0001g0041	1	80	0.0125	23	c.519 others(42): Show c.519+99969_519+99991dupAGGTATAAACATACTACACTACA	GRM7	ENSG00000196277.17	transcript	ENST00000357716.9	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRM7_chr3_6856115_7746533	6998119	C C	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02280.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0017 a0001c0002t0003g0017	1	80	0.0125	23	c.519 others(44): Show c.519+136232_519+136233insAAAAAAAAAAAAAAAAAAAAAAA	GRM7	ENSG00000196277.17	transcript	ENST00000357716.9	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRM7_chr3_6856115_7746533	7229759	A A	ATATATAT others(16): Show ATATATATATATATATATATATTT	intron_variant intron_variant	MODIFIER	NA18974.hp2 NA18974.hp2	a0001 a0001	a0001c0017 a0001c0017	a0001c0017t0001 a0001c0017t0001	a0001c0017t0001g0041 a0001c0017t0001g0041	1	80	0.0125	23	c.737 others(42): Show c.737-68924_737-68923insATATATATATATATATATATTTT	GRM7	ENSG00000196277.17	transcript	ENST00000357716.9	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRM7_chr3_6856115_7746533	7229760	T T	TATATATA others(16): Show TATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01981.hp1 HG01981.hp1	a0002 a0002	a0002c0006 a0002c0006	a0002c0006t0001 a0002c0006t0001	a0002c0006t0001g0007 a0002c0006t0001g0007	1	80	0.0125	23	c.737 others(42): Show c.737-68924_737-68923insATATATATATATATATATATATA	GRM7	ENSG00000196277.17	transcript	ENST00000357716.9	protein_coding	2/9			chr3	TogoVar
GRM7_chr3_6856115_7746533	7252671	C C	CTTTTCTT others(16): Show CTTTTCTTTTCTTTTCTTTTCTTT	intron_variant intron_variant	MODIFIER	HG03831.hp2 HG03831.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	80	0.0125	23	c.737 others(42): Show c.737-45999_737-45998insCTTTTCTTTTTTTCTTTTCTTTT	GRM7	ENSG00000196277.17	transcript	ENST00000357716.9	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRM7_chr3_6856115_7746533	7259953	G G	GTTTTTTT others(16): Show GTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0025 a0001c0001t0002g0025	1	80	0.0125	23	c.737 others(42): Show c.737-38719_737-38718insTTTTTTTTTTTTTTTTTTTTTTT	GRM7	ENSG00000196277.17	transcript	ENST00000357716.9	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRM8_chr7_126433598_127257941	126788409	C C	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0009 a0001c0001t0001g0009	1	108	0.0093	23	c.115 others(44): Show c.1157-18345_1157-18344insTTTTTTTTTTTTTTTTTTTTTTT	GRM8	ENSG00000179603.19	transcript	ENST00000339582.7	protein_coding	6/10			chr7	TogoVar
GRN_chr17_44340302_44358106	44357757	G G	GTGTGTGT others(16): Show GTGTGTGTGTGTGTGTGTGTGTGT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19084.hp1 NA19084.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0006 a0001c0002t0001g0006	1	452	0.0022	23	c.49 others(34): Show c.4959_*4960insTGTGTGTGTGTGTGTGTGTGTGT	GRN	ENSG00000030582.19	transcript	ENST00000053867.8	protein_coding		4652		chr17	TogoVar
GRPR_chrX_16118565_16158518	16120873	C C	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02809.hp2 HG02976.hp2 HG02809.hp2 HG02976.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0022 a0001c0002t0005g0060 a0001c0002t0005g0022 a0001c0002t0005g0060	2	283	0.0071	23	c.-30 others(34): Show c.-3081_-3080insTTTTTTTTTTTTTTTTTTTTTTT	GRPR	ENSG00000126010.6	transcript	ENST00000380289.3	protein_coding		2691		chrX	TogoVar
GRTP1_chr13_113319163_113369130	113352362	A A	ATATATAT others(16): Show ATATATATATATTTATATATATTT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG02280.hp1 HG00280.hp2 HG02280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0010 a0001c0001t0001g0011	2	288	0.0069	23	c.341 others(40): Show c.341-1390_341-1389insAAATATATATAAATATATATATA	GRTP1	ENSG00000139835.14	transcript	ENST00000375431.9	protein_coding	3/7			chr13	TogoVar
GRTP1_chr13_113319163_113369130	113364265	G G	GCGGGGGA others(16): Show GCGGGGGAGGGGCGGGGGAGGGGC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00597.hp2 HG00597.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0049 a0001c0001t0001g0049	1	288	0.0035	23	c.-21 others(32): Show c.-215_-214insGCCCCTCCCCCGCCCCTCCCCCG	GRTP1	ENSG00000139835.14	transcript	ENST00000375431.9	protein_coding		136		chr13	TogoVar
GRTP1_chr13_113319163_113369130	113364265	G G	GCGGGGGA others(16): Show GCGGGGGAGGGGCGGGGGGAGGGC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18960.hp1 NA18960.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0056 a0001c0001t0001g0056	1	288	0.0035	23	c.-21 others(32): Show c.-215_-214insGCCCTCCCCCCGCCCCTCCCCCG	GRTP1	ENSG00000139835.14	transcript	ENST00000375431.9	protein_coding		136		chr13	TogoVar
GRTP1_chr13_113319163_113369130	113364272	A A	AGGGGCGG others(16): Show AGGGGCGGGGGAGGGCCGGGGGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01257.hp1 HG01257.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0045 a0001c0001t0001g0045	1	288	0.0035	23	c.-22 others(32): Show c.-222_-221insCTCCCCCGGCCCTCCCCCGCCCC	GRTP1	ENSG00000139835.14	transcript	ENST00000375431.9	protein_coding		143		chr13	TogoVar
GSAP_chr7_77305751_77421349	77402593	C C	CAAAAAAA others(16): Show CAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01516.hp1 HG01516.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0103 a0002c0003t0001g0103	1	352	0.0028	23	c.243 others(40): Show c.243+1943_243+1965dupTTTTTTTTTTTTTTTTTTTTTTT	GSAP	ENSG00000186088.16	transcript	ENST00000257626.12	protein_coding	3/30			chr7	TogoVar
GSAP_chr7_77305751_77421349	77402616	A A	AAAAAAAA others(16): Show AAAAAAAAAAAAAAAAAAAAAAAT	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01993.hp2 NA18906.hp1 others(4): Show HG01070.hp1 HG01993.hp2 NA18906.hp1 NA18952.hp2 NA18995.hp2 NA19066.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0010 a0001c0001 a0001c0010	a0001c0001t0001 a0001c0010t0001 a0001c0001t0001 a0001c0010t0001	a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0085 others(4): Show a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0085 a0001c0001t0001g0210 a0001c0001t0001g0214 a0001c0001t0001g0232 a0001c0010t0001g0152	7	352	0.0199	23	c.243 others(40): Show c.243+1942_243+1943insATTTTTTTTTTTTTTTTTTTTTT	GSAP	ENSG00000186088.16	transcript	ENST00000257626.12	protein_coding	3/30			chr7	TogoVar
GSE1_chr16_85608322_85681200	85627044	C C	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01928.hp1 HG01993.hp1 HG02809.hp2 others(3): Show HG01928.hp1 HG01993.hp1 HG02809.hp2 HG03453.hp2 HG03579.hp2 HG04184.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0010	a0001c0001 a0001c0003 a0002c0045 others(2): Show a0001c0001 a0001c0003 a0002c0045 a0003c0010 a0010c0015	a0001c0001t0002 a0001c0001t0017 a0001c0003t0001 others(3): Show a0001c0001t0002 a0001c0001t0017 a0001c0003t0001 a0002c0045t0047 a0003c0010t0002 a0010c0015t0001	a0001c0001t0002g0087 a0001c0001t0017g0243 a0001c0003t0001g0206 others(3): Show a0001c0001t0002g0087 a0001c0001t0017g0243 a0001c0003t0001g0206 a0002c0045t0047g0056 a0003c0010t0002g0110 a0010c0015t0001g0154	6	290	0.0207	23	c.8-6 others(36): Show c.8-6860_8-6838dupTTTTTTTTTTTTTTTTTTTTTTT	GSE1	ENSG00000131149.19	transcript	ENST00000253458.12	protein_coding	1/15		INFO_REALIGN_3_PRIME	chr16	TogoVar
GSE1_chr16_85608322_85681200	85651026	G G	GCTCCTCC others(16): Show GCTCCTCCCCCTCCCCCTCCGCCC	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00438.hp2 HG00609.hp1 others(39): Show HG00099.hp1 HG00438.hp2 HG00609.hp1 HG00609.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01109.hp2 HG01167.hp1 HG01255.hp2 HG01496.hp1 HG01884.hp1 HG01891.hp2 HG02004.hp2 HG02055.hp2 HG02129.hp1 HG02165.hp1 HG02451.hp2 HG02622.hp2 HG02630.hp2 HG02738.hp1 HG02970.hp2 HG03017.hp2 HG03139.hp1 HG03225.hp2 HG03490.hp1 HG03490.hp2 HG03492.hp1 HG03654.hp1 HG03704.hp1 HG03942.hp2 NA18522.hp2 NA18612.hp2 NA18945.hp2 NA18947.hp2 NA18966.hp1 NA18970.hp1 NA19007.hp1 NA19240.hp2 NA20805.hp1	a0001 a0002 a0005 others(3): Show a0001 a0002 a0005 a0017 a0019 a0020	a0001c0001 a0001c0002 a0001c0055 others(7): Show a0001c0001 a0001c0002 a0001c0055 a0002c0006 a0002c0008 a0002c0016 a0005c0046 a0017c0044 a0019c0025 a0020c0042	a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 others(20): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0011 a0001c0001t0012 a0001c0001t0015 a0001c0001t0027 a0001c0001t0028 a0001c0001t0029 a0001c0001t0056 a0001c0001t0061 a0001c0002t0001 a0001c0002t0005 a0001c0002t0007 a0001c0055t0048 a0002c0006t0001 a0002c0008t0001 a0002c0008t0036 a0002c0016t0003 a0005c0046t0003 a0017c0044t0002 a0019c0025t0024 a0020c0042t0008	a0001c0001t0002g0041 a0001c0001t0002g0069 a0001c0001t0002g0097 others(39): Show a0001c0001t0002g0041 a0001c0001t0002g0069 a0001c0001t0002g0097 a0001c0001t0002g0146 a0001c0001t0002g0236 a0001c0001t0003g0004 a0001c0001t0003g0020 a0001c0001t0003g0036 a0001c0001t0003g0096 a0001c0001t0003g0099 a0001c0001t0003g0141 a0001c0001t0003g0161 a0001c0001t0003g0170 a0001c0001t0003g0187 a0001c0001t0007g0038 a0001c0001t0007g0135 a0001c0001t0011g0136 a0001c0001t0012g0210 a0001c0001t0015g0127 a0001c0001t0015g0128 a0001c0001t0027g0063 a0001c0001t0028g0129 a0001c0001t0029g0044 a0001c0001t0056g0179 a0001c0001t0061g0158 a0001c0002t0001g0018 a0001c0002t0005g0274 a0001c0002t0007g0267 a0001c0055t0048g0241 a0002c0006t0001g0216 a0002c0006t0001g0221 a0002c0006t0001g0222 a0002c0006t0001g0242 a0002c0006t0001g0253 a0002c0006t0001g0255 a0002c0008t0001g0168 a0002c0008t0036g0277 a0002c0016t0003g0104 a0005c0046t0003g0034 a0017c0044t0002g0024 a0019c0025t0024g0275 a0020c0042t0008g0042	42	290	0.1448	23	c.426 others(40): Show c.426+2321_426+2343dupCCTCCTCCCCCTCCCCCTCCGCC	GSE1	ENSG00000131149.19	transcript	ENST00000253458.12	protein_coding	3/15		INFO_REALIGN_3_PRIME	chr16	TogoVar
GSE1_chr16_85608322_85681200	85651026	G G	GCTCTCCC others(16): Show GCTCTCCCCCTCCCCCCTCCGCCC	intron_variant intron_variant	MODIFIER	HG03710.hp1 HG03710.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0005 a0001c0001t0003g0005	1	290	0.0035	23	c.426 others(40): Show c.426+2278_426+2279insTCCCCCTCCCCCCTCCGCCCCTC	GSE1	ENSG00000131149.19	transcript	ENST00000253458.12	protein_coding	3/15		INFO_REALIGN_3_PRIME	chr16	TogoVar
GSE1_chr16_85608322_85681200	85651052	C C	CCTCCCCC others(16): Show CCTCCCCCTCCCCCTCCGCCCCTG	intron_variant intron_variant	MODIFIER	HG02165.hp2 HG02698.hp1 HG03492.hp2 HG02165.hp2 HG02698.hp1 HG03492.hp2	a0002 a0011 a0014 a0002 a0011 a0014	a0002c0004 a0011c0052 a0014c0049 a0002c0004 a0011c0052 a0014c0049	a0002c0004t0002 a0011c0052t0002 a0014c0049t0037 a0002c0004t0002 a0011c0052t0002 a0014c0049t0037	a0002c0004t0002g0019 a0011c0052t0002g0122 a0014c0049t0037g0125 a0002c0004t0002g0019 a0011c0052t0002g0122 a0014c0049t0037g0125	3	290	0.0103	23	c.426 others(40): Show c.426+2323_426+2324insGCTCCCCCTCCCCCTCCGCCCCT	GSE1	ENSG00000131149.19	transcript	ENST00000253458.12	protein_coding	3/15		INFO_REALIGN_3_PRIME	chr16	TogoVar
GSG1L_chr16_27782528_28068714	27946584	A A	AGAAAGAG others(16): Show AGAAAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0045 a0001c0001t0007g0045	1	240	0.0042	23	c.397 others(42): Show c.397+16571_397+16572insCTCTCTCTCTCTCTCTCTCTTTC	GSG1L	ENSG00000169181.13	transcript	ENST00000447459.7	protein_coding	2/6			chr16	TogoVar
GSG1L_chr16_27782528_28068714	27946656	A A	AAAGAAAG others(16): Show AAAGAAAGAAAGAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG02300.hp2 HG02300.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0013 a0001c0002t0013	a0001c0002t0013g0216 a0001c0002t0013g0216	1	240	0.0042	23	c.397 others(42): Show c.397+16499_397+16500insCTTTCTTTCTTTCTTTCTTTCTT	GSG1L	ENSG00000169181.13	transcript	ENST00000447459.7	protein_coding	2/6			chr16	TogoVar
GSK3B_chr3_119816321_120099447	119865467	T T	TATATATA others(16): Show TATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00735.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0013 a0001c0002t0013	a0001c0002t0013g0055 a0001c0002t0013g0055	1	300	0.0033	23	c.910 others(40): Show c.910-1863_910-1862insTATATATATATATATATATATAT	GSK3B	ENSG00000082701.17	transcript	ENST00000264235.13	protein_coding	8/10			chr3	TogoVar
GSTA1_chr6_52786371_52808816	52796543	A A	ATATATAT others(16): Show ATATATATATTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03834.hp1 NA18981.hp2 HG03834.hp1 NA18981.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0170 a0001c0002t0002g0181 a0001c0002t0002g0170 a0001c0002t0002g0181	2	436	0.0046	23	c.140 others(38): Show c.140-230_140-229insAAAAAAAAAAAAAAATATATATA	GSTA1	ENSG00000243955.6	transcript	ENST00000334575.6	protein_coding	3/6			chr6	TogoVar
GSTA1_chr6_52786371_52808816	52796543	A A	ATATATAT others(16): Show ATATATATTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0086 a0001c0001t0002g0086	1	436	0.0023	23	c.140 others(38): Show c.140-230_140-229insAAAAAAAAAAAAAAAAATATATA	GSTA1	ENSG00000243955.6	transcript	ENST00000334575.6	protein_coding	3/6			chr6	TogoVar
GSTO2_chr10_104264184_104309950	104293563	A A	ATTTTTTT others(16): Show ATTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00323.hp1 NA20805.hp2 NA20905.hp2 HG00323.hp1 NA20805.hp2 NA20905.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0101 a0001c0002t0002g0118 a0001c0002t0002g0121 a0001c0002t0002g0101 a0001c0002t0002g0118 a0001c0002t0002g0121	3	300	0.0100	23	c.469 others(40): Show c.469-3993_469-3992insTTTTTTTTTTTTTTTTTTTTTTT	GSTO2	ENSG00000065621.15	transcript	ENST00000338595.7	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
GSTO2_chr10_104264184_104309950	104309330	A A	ATATATAT others(16): Show ATATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0059 a0001c0003t0003g0059	1	300	0.0033	23	c.10 others(36): Show c.10046_*10047insTATATATATATATATATATATAT	GSTO2	ENSG00000065621.15	transcript	ENST00000338595.7	protein_coding		4381		chr10	TogoVar
GSTO2_chr10_104264184_104309950	104309331	T T	TATATATA others(16): Show TATATATATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18997.hp1 NA19002.hp2 NA18997.hp1 NA19002.hp2	a0001 a0002 a0001 a0002	a0001c0003 a0002c0005 a0001c0003 a0002c0005	a0001c0003t0003 a0002c0005t0003 a0001c0003t0003 a0002c0005t0003	a0001c0003t0003g0069 a0002c0005t0003g0219 a0001c0003t0003g0069 a0002c0005t0003g0219	2	300	0.0067	23	c.10 others(36): Show c.10047_*10048insATATATATATATATATATATATA	GSTO2	ENSG00000065621.15	transcript	ENST00000338595.7	protein_coding		4382		chr10	TogoVar
GSTP1_chr11_67578812_67591653	67583356	A A	AAATAAAA others(16): Show AAATAAAATAAAATAAAATAAAAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00735.hp2 HG01070.hp1 HG01081.hp1 others(10): Show HG00735.hp2 HG01070.hp1 HG01081.hp1 HG01099.hp2 HG01175.hp2 HG01928.hp2 HG01978.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02273.hp1 HG02293.hp1 HG02300.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0003 a0002c0002t0002g0003	13	392	0.0332	23	c.-48 others(32): Show c.-488_-487insAATAAAATAAAATAAAATAAAAT	GSTP1	ENSG00000084207.18	transcript	ENST00000398606.10	protein_coding		455		chr11	TogoVar
GTF2A2_chr15_59633062_59662515	59640156	T T	TACTACAC others(16): Show TACTACACCGTGCTGAAGTGTGAG	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp2 others(180): Show HG00099.hp1 HG00099.hp2 HG00140.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00639.hp1 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01071.hp1 HG01074.hp1 HG01081.hp2 HG01106.hp1 HG01123.hp1 HG01167.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp2 HG01346.hp2 HG01358.hp2 HG01361.hp2 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp1 HG01928.hp2 HG01934.hp2 HG01943.hp2 HG01952.hp2 HG01975.hp2 HG01978.hp1 HG01981.hp2 HG01993.hp2 HG02004.hp1 HG02015.hp1 HG02027.hp1 HG02027.hp2 HG02055.hp1 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02074.hp1 HG02080.hp1 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp2 HG02148.hp2 HG02155.hp2 HG02165.hp1 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp2 HG02486.hp1 HG02523.hp1 HG02602.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02723.hp1 HG02738.hp2 HG02886.hp2 HG02965.hp2 HG03017.hp2 HG03041.hp1 HG03130.hp1 HG03139.hp2 HG03209.hp2 HG03453.hp2 HG03491.hp2 HG03654.hp2 HG03704.hp1 HG03710.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG03942.hp2 HG04115.hp2 HG04184.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 NA18612.hp1 NA18747.hp2 NA18906.hp1 NA18940.hp2 NA18941.hp1 NA18942.hp2 NA18944.hp1 NA18944.hp2 NA18946.hp1 NA18947.hp2 NA18948.hp1 NA18950.hp1 NA18950.hp2 NA18952.hp2 NA18953.hp1 NA18955.hp1 NA18956.hp2 NA18957.hp2 NA18959.hp1 NA18961.hp2 NA18962.hp2 NA18964.hp2 NA18966.hp2 NA18969.hp1 NA18970.hp1 NA18971.hp1 NA18973.hp2 NA18974.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp1 NA18980.hp1 NA18980.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18987.hp2 NA18991.hp1 NA18993.hp1 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp2 NA19000.hp2 NA19001.hp2 NA19002.hp1 NA19003.hp1 NA19003.hp2 NA19005.hp2 NA19006.hp1 NA19011.hp1 NA19012.hp1 NA19012.hp2 NA19030.hp2 NA19054.hp2 NA19058.hp2 NA19065.hp1 NA19066.hp2 NA19068.hp2 NA19072.hp2 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp2 NA19078.hp2 NA19080.hp1 NA19080.hp2 NA19082.hp1 NA19083.hp1 NA19084.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp2 NA19090.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0007 others(9): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0011 a0001c0001t0012 a0001c0001t0014 a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 a0001c0001t0019 a0001c0001t0020	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0008 others(106): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0008 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0134 a0001c0001t0001g0137 a0001c0001t0001g0139 a0001c0001t0001g0142 a0001c0001t0001g0145 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0006g0132 a0001c0001t0007g0040 a0001c0001t0007g0140 a0001c0001t0007g0141 a0001c0001t0007g0146 a0001c0001t0008g0036 a0001c0001t0008g0090 a0001c0001t0011g0062 a0001c0001t0011g0065 a0001c0001t0012g0071 a0001c0001t0012g0072 a0001c0001t0014g0119 a0001c0001t0016g0103 a0001c0001t0017g0108 a0001c0001t0018g0133 a0001c0001t0019g0091 a0001c0001t0020g0131	183	436	0.4197	23	c.305 others(40): Show c.305-1022_305-1000dupCTCACACTTCAGCACGGTGTAGT	GTF2A2	ENSG00000140307.11	transcript	ENST00000396060.7	protein_coding	4/4			chr15	TogoVar
GTF2F2_chr13_45115510_45289893	45191224	A A	AAAAAAAT others(16): Show AAAAAAATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0048 a0001c0001t0001g0048	1	210	0.0048	23	c.305 others(42): Show c.305-16199_305-16198insAAAAATATATATATATATATATA	GTF2F2	ENSG00000188342.13	transcript	ENST00000340473.8	protein_coding	4/7		INFO_REALIGN_3_PRIME	chr13	TogoVar
GTF2F2_chr13_45115510_45289893	45212447	G G	GTTTCTTT others(16): Show GTTTCTTTCTTTCTTTTCTTTTCT	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG02074.hp2 HG03654.hp2 others(11): Show HG00673.hp1 HG02074.hp2 HG03654.hp2 NA18948.hp2 NA18957.hp1 NA18962.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18983.hp2 NA18998.hp2 NA19009.hp1 NA19066.hp1 NA19075.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0104 a0001c0002t0001g0127 a0001c0002t0001g0136 others(11): Show a0001c0002t0001g0104 a0001c0002t0001g0127 a0001c0002t0001g0136 a0001c0002t0001g0152 a0001c0002t0001g0153 a0001c0002t0001g0155 a0001c0002t0001g0156 a0001c0002t0001g0157 a0001c0002t0001g0158 a0001c0002t0001g0159 a0001c0002t0001g0161 a0001c0002t0001g0162 a0001c0002t0001g0169 a0001c0002t0001g0172	14	210	0.0667	23	c.386 others(40): Show c.386+4957_386+4958insTCTTTTCTTTTCTTTCTTTCTTT	GTF2F2	ENSG00000188342.13	transcript	ENST00000340473.8	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr13	TogoVar
GTF2F2_chr13_45115510_45289893	45228283	C C	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02647.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0073 a0001c0001t0001g0073	1	210	0.0048	23	c.386 others(42): Show c.386+20794_386+20795insTTTTTTTTTTTTTTTTTTTTTTT	GTF2F2	ENSG00000188342.13	transcript	ENST00000340473.8	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr13	TogoVar
GTF2H1_chr11_18317567_18372045	18367876	A A	ATATATAT others(16): Show ATATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0263 a0001c0001t0001g0263	1	370	0.0027	23	c.20 others(34): Show c.2007_*2008insTATATATATATATATATATATAT	GTF2H1	ENSG00000110768.12	transcript	ENST00000265963.9	protein_coding		832		chr11	TogoVar
GTF2H5_chr6_158163350_158204344	158169480	A A	ATATAATA others(16): Show ATATAATATACTGTATATTATATG	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01891.hp1 HG02451.hp1 others(13): Show HG01243.hp2 HG01891.hp1 HG02451.hp1 HG02451.hp2 HG03098.hp2 HG03130.hp2 HG03139.hp2 HG03195.hp2 HG03225.hp1 HG03471.hp1 HG03579.hp1 HG03579.hp2 NA18906.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0012 a0001c0001t0042 a0001c0001t0007 a0001c0001t0012 a0001c0001t0042	a0001c0001t0007g0003 a0001c0001t0007g0047 a0001c0001t0007g0048 others(10): Show a0001c0001t0007g0003 a0001c0001t0007g0047 a0001c0001t0007g0048 a0001c0001t0007g0049 a0001c0001t0007g0050 a0001c0001t0007g0053 a0001c0001t0007g0055 a0001c0001t0007g0056 a0001c0001t0007g0057 a0001c0001t0012g0003 a0001c0001t0012g0051 a0001c0001t0042g0003 a0001c0001t0042g0054	16	384	0.0417	23	c.-34 others(38): Show c.-34-988_-34-987insTAATATACTGTATATTATATGTA	GTF2H5	ENSG00000272047.4	transcript	ENST00000607778.2	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr6	TogoVar
GTF2H5_chr6_158163350_158204344	158169745	T T	TAATATAT others(16): Show TAATATATTGTATATTGTATATTA	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01891.hp1 HG02451.hp1 others(13): Show HG01243.hp2 HG01891.hp1 HG02451.hp1 HG02451.hp2 HG02559.hp2 HG03098.hp2 HG03130.hp2 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03225.hp1 HG03579.hp1 HG03579.hp2 NA18906.hp1 NA18906.hp2 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0012 a0001c0001t0038 others(2): Show a0001c0001t0007 a0001c0001t0012 a0001c0001t0038 a0001c0001t0042 a0001c0001t0093	a0001c0001t0007g0003 a0001c0001t0007g0048 a0001c0001t0007g0049 others(10): Show a0001c0001t0007g0003 a0001c0001t0007g0048 a0001c0001t0007g0049 a0001c0001t0007g0050 a0001c0001t0007g0053 a0001c0001t0007g0056 a0001c0001t0007g0057 a0001c0001t0012g0003 a0001c0001t0038g0017 a0001c0001t0038g0052 a0001c0001t0042g0003 a0001c0001t0042g0054 a0001c0001t0093g0017	16	384	0.0417	23	c.-34 others(38): Show c.-34-725_-34-724insAATATATTGTATATTGTATATTA	GTF2H5	ENSG00000272047.4	transcript	ENST00000607778.2	protein_coding	1/2			chr6	TogoVar

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