Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LIPM_chr10_88797730_88825546	88822544	C C	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00438.hp2 HG00642.hp2 HG01258.hp2 others(13): Show HG00438.hp2 HG00642.hp2 HG01258.hp2 HG01952.hp2 HG02083.hp1 HG02135.hp1 HG02738.hp2 HG03516.hp2 HG04204.hp1 NA18952.hp2 NA18975.hp2 NA19011.hp2 NA19066.hp1 NA19078.hp1 NA19078.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0028 a0001c0001t0001g0054 a0001c0001t0001g0217 others(9): Show a0001c0001t0001g0028 a0001c0001t0001g0054 a0001c0001t0001g0217 a0001c0001t0001g0223 a0001c0002t0001g0001 a0001c0002t0001g0023 a0001c0002t0001g0063 a0001c0002t0001g0088 a0001c0002t0001g0113 a0001c0002t0001g0114 a0001c0002t0001g0128 a0001c0002t0001g0234	16	462	0.0346	23	c.20 others(34): Show c.2043_*2044insTTTTTTTTTTTTTTTTTTTTTTT	LIPM	ENSG00000173239.14	transcript	ENST00000404743.9	protein_coding		1999		chr10	TogoVar
LMF1_chr16_848634_975984	857429	C C	CAGTGGTG others(16): Show CAGTGGTGTCACGGGACGGGTGTG	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG01243.hp1 HG03195.hp1 HG00733.hp1 HG01243.hp1 HG03195.hp1	a0007 a0014 a0007 a0014	a0007c0028 a0014c0040 a0007c0028 a0014c0040	a0007c0028t0004 a0014c0040t0004 a0007c0028t0004 a0014c0040t0004	a0007c0028t0004g0017 a0007c0028t0004g0265 a0014c0040t0004g0270 a0007c0028t0004g0017 a0007c0028t0004g0265 a0014c0040t0004g0270	3	294	0.0102	23	c.153 others(42): Show c.1530-2746_1530-2724dupCACACCCGTCCCGTGACACCACT	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	857462	T T	TCGGGACG others(16): Show TCGGGACGGGTGTGAGTGGTGTCA	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG02135.hp1 HG02165.hp1 others(2): Show HG00544.hp1 HG02135.hp1 HG02165.hp1 NA18951.hp2 NA19011.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0132 a0001c0001t0001g0160 a0001c0001t0001g0173 others(2): Show a0001c0001t0001g0132 a0001c0001t0001g0160 a0001c0001t0001g0173 a0001c0001t0001g0189 a0001c0001t0001g0190	5	294	0.0170	23	c.153 others(42): Show c.1530-2779_1530-2757dupTGACACCACTCACACCCGTCCCG	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	857485	A A	ACGGGACG others(16): Show ACGGGACGGGTGTGAGTGGTGTCT	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02818.hp2 NA18964.hp1 HG02280.hp1 HG02818.hp2 NA18964.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0025 a0001c0001 a0004c0025	a0001c0001t0003 a0004c0025t0007 a0001c0001t0003 a0004c0025t0007	a0001c0001t0003g0196 a0004c0025t0007g0259 a0004c0025t0007g0294 a0001c0001t0003g0196 a0004c0025t0007g0259 a0004c0025t0007g0294	3	294	0.0102	23	c.153 others(42): Show c.1530-2780_1530-2779insAGACACCACTCACACCCGTCCCG	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	857508	T T	TCGGGACG others(16): Show TCGGGACGGGTGTGAGTGGTGTCA	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01978.hp2 HG02109.hp2 others(4): Show HG01099.hp2 HG01978.hp2 HG02109.hp2 HG02486.hp2 HG03831.hp1 HG04184.hp2 HG04199.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0001c0012 others(1): Show a0001c0001 a0001c0002 a0001c0012 a0003c0014	a0001c0001t0001 a0001c0002t0001 a0001c0012t0001 others(1): Show a0001c0001t0001 a0001c0002t0001 a0001c0012t0001 a0003c0014t0001	a0001c0001t0001g0024 a0001c0001t0001g0121 a0001c0001t0001g0150 others(4): Show a0001c0001t0001g0024 a0001c0001t0001g0121 a0001c0001t0001g0150 a0001c0001t0001g0204 a0001c0002t0001g0021 a0001c0012t0001g0094 a0003c0014t0001g0015	7	294	0.0238	23	c.153 others(42): Show c.1530-2825_1530-2803dupTGACACCACTCACACCCGTCCCG	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	857531	A A	ACGGGACG others(16): Show ACGGGACGGGTGTGAGTGGTGTCT	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0001 a0001	a0001c0020 a0001c0020	a0001c0020t0001 a0001c0020t0001	a0001c0020t0001g0100 a0001c0020t0001g0100	1	294	0.0034	23	c.153 others(42): Show c.1530-2826_1530-2825insAGACACCACTCACACCCGTCCCG	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	857738	T T	TCGGGACG others(16): Show TCGGGACGGGTGTGCGTGGTGTCA	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00621.hp1 HG01515.hp1 others(3): Show HG00280.hp2 HG00621.hp1 HG01515.hp1 HG01517.hp2 NA19012.hp1 NA19068.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0003c0009 a0001c0001 a0001c0002 a0003c0009	a0001c0001t0001 a0001c0002t0001 a0003c0009t0001 a0001c0001t0001 a0001c0002t0001 a0003c0009t0001	a0001c0001t0001g0215 a0001c0001t0001g0257 a0001c0001t0001g0261 others(3): Show a0001c0001t0001g0215 a0001c0001t0001g0257 a0001c0001t0001g0261 a0001c0002t0001g0041 a0003c0009t0001g0002 a0003c0009t0001g0003	6	294	0.0204	23	c.153 others(42): Show c.1530-3033_1530-3032insTGACACCACGCACACCCGTCCCG	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	857799	C C	CGTGGTGT others(16): Show CGTGGTGTCTCGGGACGGGTGTGA	intron_variant intron_variant	MODIFIER	HG02135.hp1 HG02135.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0190 a0001c0001t0001g0190	1	294	0.0034	23	c.153 others(42): Show c.1530-3094_1530-3093insTCACACCCGTCCCGAGACACCAC	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	857886	G G	GTGTGAGT others(16): Show GTGTGAGTGGTGTCTCGGGATGGT	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG02698.hp2 HG01168.hp1 HG02698.hp2	a0001 a0001	a0001c0001 a0001c0008 a0001c0001 a0001c0008	a0001c0001t0002 a0001c0008t0002 a0001c0001t0002 a0001c0008t0002	a0001c0001t0002g0229 a0001c0008t0002g0071 a0001c0001t0002g0229 a0001c0008t0002g0071	2	294	0.0068	23	c.153 others(42): Show c.1530-3181_1530-3180insACCATCCCGAGACACCACTCACA	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	857892	A A	AGTGGTGT others(16): Show AGTGGTGTCTCGGGATGGGTGTGC	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG01361.hp1 HG01515.hp2 others(5): Show HG01074.hp1 HG01361.hp1 HG01515.hp2 HG01928.hp2 NA18948.hp2 NA18962.hp1 NA19068.hp1 NA20905.hp1	a0001 a0013 a0021 a0001 a0013 a0021	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0013 a0013c0037 a0021c0062	a0001c0001t0001 a0001c0002t0001 a0001c0003t0005 others(3): Show a0001c0001t0001 a0001c0002t0001 a0001c0003t0005 a0001c0013t0001 a0013c0037t0005 a0021c0062t0008	a0001c0001t0001g0201 a0001c0001t0001g0293 a0001c0002t0001g0041 others(5): Show a0001c0001t0001g0201 a0001c0001t0001g0293 a0001c0002t0001g0041 a0001c0002t0001g0042 a0001c0003t0005g0146 a0001c0013t0001g0220 a0013c0037t0005g0278 a0021c0062t0008g0212	8	294	0.0272	23	c.153 others(42): Show c.1530-3209_1530-3187dupGCACACCCATCCCGAGACACCAC	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	857915	C C	CGTGGTGT others(16): Show CGTGGTGTCTCGGGATGGGTGTGA	intron_variant intron_variant	MODIFIER	NA20129.hp1 NA20129.hp1	a0005 a0005	a0005c0027 a0005c0027	a0005c0027t0001 a0005c0027t0001	a0005c0027t0001g0032 a0005c0027t0001g0032	1	294	0.0034	23	c.153 others(42): Show c.1530-3210_1530-3209insTCACACCCATCCCGAGACACCAC	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	857948	C C	CGGGATGG others(16): Show CGGGATGGGTGTGCGTGGTGTCTA	intron_variant intron_variant	MODIFIER	HG01515.hp1 HG01517.hp2 HG01515.hp1 HG01517.hp2	a0003 a0003	a0003c0009 a0003c0009	a0003c0009t0001 a0003c0009t0001	a0003c0009t0001g0002 a0003c0009t0001g0003 a0003c0009t0001g0002 a0003c0009t0001g0003	2	294	0.0068	23	c.153 others(42): Show c.1530-3243_1530-3242insTAGACACCACGCACACCCATCCC	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	857984	C C	CGTGGTGT others(16): Show CGTGGTGTCTCGGGATGGGTGTGA	intron_variant intron_variant	MODIFIER	NA18944.hp1 NA18944.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0019	a0001c0001t0019g0258 a0001c0001t0019g0258	1	294	0.0034	23	c.153 others(42): Show c.1530-3301_1530-3279dupTCACACCCATCCCGAGACACCAC	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	858238	A A	AGTGGTGT others(16): Show AGTGGTGTCTCGGGATGGGTGTGC	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01261.hp2	a0003 a0003	a0003c0009 a0003c0009	a0003c0009t0001 a0003c0009t0001	a0003c0009t0001g0007 a0003c0009t0001g0007	1	294	0.0034	23	c.153 others(42): Show c.1530-3533_1530-3532insGCACACCCATCCCGAGACACCAC	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	858262	A A	AGTGGTGT others(16): Show AGTGGTGTCTCGGGATGGGTGTGC	intron_variant intron_variant	MODIFIER	NA19010.hp2 NA19091.hp1 NA19010.hp2 NA19091.hp1	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0001 a0001c0008t0001	a0001c0008t0001g0023 a0001c0008t0001g0090 a0001c0008t0001g0023 a0001c0008t0001g0090	2	294	0.0068	23	c.153 others(42): Show c.1530-3579_1530-3557dupGCACACCCATCCCGAGACACCAC	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	858389	T T	TCGGGATG others(16): Show TCGGGATGGGTGTGAGTGGTGTCA	intron_variant intron_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0288 a0001c0002t0001g0288	1	294	0.0034	23	c.153 others(42): Show c.1530-3684_1530-3683insTGACACCACTCACACCCATCCCG	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	858473	A A	AGTGGTGT others(16): Show AGTGGTGTCTCGGGATGGGTGTGC	intron_variant intron_variant	MODIFIER	HG01258.hp1 HG01258.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0177 a0001c0001t0001g0177	1	294	0.0034	23	c.153 others(42): Show c.1530-3768_1530-3767insGCACACCCATCCCGAGACACCAC	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	858974	A A	ACGGGACG others(16): Show ACGGGACGGGTGTGAGTGGTGTCT	intron_variant intron_variant	MODIFIER	HG02165.hp2 HG02165.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0227 a0001c0001t0001g0227	1	294	0.0034	23	c.153 others(42): Show c.1530-4269_1530-4268insAGACACCACTCACACCCGTCCCG	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	859040	A A	ATGTCACG others(16): Show ATGTCACGGGACGGGTGTGAGTGG	intron_variant intron_variant	MODIFIER	NA18973.hp2 NA18973.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0162 a0001c0001t0017g0162	1	294	0.0034	23	c.153 others(42): Show c.1530-4357_1530-4335dupCCACTCACACCCGTCCCGTGACA	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	859153	C C	CACTGATG others(16): Show CACTGATGTCACGGGACGGGTGTG	intron_variant intron_variant	MODIFIER	HG03704.hp2 HG03704.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0228 a0001c0001t0001g0228	1	294	0.0034	23	c.153 others(42): Show c.1530-4448_1530-4447insCACACCCGTCCCGTGACATCAGT	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	859153	C C	CAGTGGTG others(16): Show CAGTGGTGTCTCGGGACGGGTGCG	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02896.hp1 HG01891.hp2 HG02896.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0048 a0001c0002t0001g0049 a0001c0002t0001g0048 a0001c0002t0001g0049	2	294	0.0068	23	c.153 others(42): Show c.1530-4448_1530-4447insCGCACCCGTCCCGAGACACCACT	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	859153	C C	CAGTGGTG others(16): Show CAGTGGTGTCTCGGGACGGGTGTG	intron_variant intron_variant	MODIFIER	HG02896.hp2 NA18906.hp1 HG02896.hp2 NA18906.hp1	a0005 a0006 a0005 a0006	a0005c0034 a0006c0021 a0005c0034 a0006c0021	a0005c0034t0015 a0006c0021t0006 a0005c0034t0015 a0006c0021t0006	a0005c0034t0015g0274 a0006c0021t0006g0019 a0005c0034t0015g0274 a0006c0021t0006g0019	2	294	0.0068	23	c.153 others(42): Show c.1530-4470_1530-4448dupCACACCCGTCCCGAGACACCACT	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	859163	T T	TCGGGACG others(16): Show TCGGGACGGGTGTGAGTGATGTCA	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG01071.hp2 HG01884.hp2 HG01069.hp1 HG01071.hp2 HG01884.hp2	a0001 a0003 a0001 a0003	a0001c0006 a0003c0030 a0001c0006 a0003c0030	a0001c0006t0002 a0003c0030t0002 a0001c0006t0002 a0003c0030t0002	a0001c0006t0002g0282 a0001c0006t0002g0283 a0003c0030t0002g0008 a0001c0006t0002g0282 a0001c0006t0002g0283 a0003c0030t0002g0008	3	294	0.0102	23	c.153 others(42): Show c.1530-4458_1530-4457insTGACATCACTCACACCCGTCCCG	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	859171	G G	GGTGTGAG others(16): Show GGTGTGAGTGATGTCACGGGACGT	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG03486.hp2 HG03579.hp1 HG02886.hp2 HG03486.hp2 HG03579.hp1	a0001 a0001	a0001c0004 a0001c0055 a0001c0060 a0001c0004 a0001c0055 a0001c0060	a0001c0004t0004 a0001c0055t0002 a0001c0060t0002 a0001c0004t0004 a0001c0055t0002 a0001c0060t0002	a0001c0004t0004g0030 a0001c0055t0002g0137 a0001c0060t0002g0128 a0001c0004t0004g0030 a0001c0055t0002g0137 a0001c0060t0002g0128	3	294	0.0102	23	c.153 others(42): Show c.1530-4466_1530-4465insACGTCCCGTGACATCACTCACAC	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	859257	A A	ACGGGACG others(16): Show ACGGGACGGGTGTGAGTGGTGTCT	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG01515.hp2 NA19064.hp1 others(1): Show HG01074.hp1 HG01515.hp2 NA19064.hp1 NA20905.hp1	a0001 a0013 a0001 a0013	a0001c0001 a0001c0003 a0013c0037 a0001c0001 a0001c0003 a0013c0037	a0001c0001t0001 a0001c0003t0001 a0001c0003t0005 others(1): Show a0001c0001t0001 a0001c0003t0001 a0001c0003t0005 a0013c0037t0005	a0001c0001t0001g0201 a0001c0003t0001g0186 a0001c0003t0005g0146 others(1): Show a0001c0001t0001g0201 a0001c0003t0001g0186 a0001c0003t0005g0146 a0013c0037t0005g0278	4	294	0.0136	23	c.153 others(42): Show c.1530-4574_1530-4552dupAGACACCACTCACACCCGTCCCG	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	859341	C C	CAGTGGTG others(16): Show CAGTGGTGTCTCGGGACGGGTGTG	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG02698.hp2 HG01168.hp1 HG02698.hp2	a0001 a0001	a0001c0001 a0001c0008 a0001c0001 a0001c0008	a0001c0001t0002 a0001c0008t0002 a0001c0001t0002 a0001c0008t0002	a0001c0001t0002g0229 a0001c0008t0002g0071 a0001c0001t0002g0229 a0001c0008t0002g0071	2	294	0.0068	23	c.153 others(42): Show c.1530-4658_1530-4636dupCACACCCGTCCCGAGACACCACT	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	859384	G G	GTGTGACT others(16): Show GTGTGACTGGTGTCTCGGGACGGT	intron_variant intron_variant	MODIFIER	NA18990.hp2 NA19064.hp2 NA18990.hp2 NA19064.hp2	a0001 a0001	a0001c0003 a0001c0004 a0001c0003 a0001c0004	a0001c0003t0001 a0001c0004t0001 a0001c0003t0001 a0001c0004t0001	a0001c0003t0001g0183 a0001c0004t0001g0077 a0001c0003t0001g0183 a0001c0004t0001g0077	2	294	0.0068	23	c.153 others(42): Show c.1530-4679_1530-4678insACCGTCCCGAGACACCAGTCACA	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	859493	C C	CGGGACGG others(16): Show CGGGACGGGTGTGAGTGGTGTCTG	intron_variant intron_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0011 a0011	a0011c0038 a0011c0038	a0011c0038t0001 a0011c0038t0001	a0011c0038t0001g0245 a0011c0038t0001g0245	1	294	0.0034	23	c.153 others(42): Show c.1530-4788_1530-4787insCAGACACCACTCACACCCGTCCC	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	859601	C C	CAGTGGTG others(16): Show CAGTGGTGTCACGGGACGGGTGTG	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG01261.hp1 HG01993.hp1 others(3): Show HG00642.hp1 HG01261.hp1 HG01993.hp1 HG02083.hp1 HG03942.hp2 NA19066.hp1	a0001 a0001	a0001c0001 a0001c0013 a0001c0001 a0001c0013	a0001c0001t0001 a0001c0013t0001 a0001c0001t0001 a0001c0013t0001	a0001c0001t0001g0105 a0001c0001t0001g0123 a0001c0001t0001g0221 others(3): Show a0001c0001t0001g0105 a0001c0001t0001g0123 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0226 a0001c0013t0001g0045	6	294	0.0204	23	c.153 others(42): Show c.1530-4896_1530-4895insCACACCCGTCCCGTGACACCACT	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	859744	C C	CAGTGGTG others(16): Show CAGTGGTGTCTCGGGATGGGTGTG	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG01099.hp1 HG01243.hp1 others(11): Show HG00733.hp1 HG01099.hp1 HG01243.hp1 HG02280.hp1 HG02818.hp2 HG02896.hp2 HG03098.hp2 HG03195.hp1 HG03239.hp1 HG03834.hp2 HG03927.hp1 NA18964.hp1 NA20300.hp1 NA20752.hp1	a0001 a0004 a0006 others(3): Show a0001 a0004 a0006 a0007 a0008 a0014	a0001c0001 a0004c0025 a0004c0029 others(8): Show a0001c0001 a0004c0025 a0004c0029 a0004c0043 a0006c0021 a0006c0048 a0007c0028 a0008c0036 a0008c0045 a0008c0061 a0014c0040	a0001c0001t0003 a0004c0025t0007 a0004c0029t0003 others(8): Show a0001c0001t0003 a0004c0025t0007 a0004c0029t0003 a0004c0043t0003 a0006c0021t0006 a0006c0048t0006 a0007c0028t0004 a0008c0036t0003 a0008c0045t0003 a0008c0061t0003 a0014c0040t0004	a0001c0001t0003g0196 a0004c0025t0007g0259 a0004c0025t0007g0294 others(11): Show a0001c0001t0003g0196 a0004c0025t0007g0259 a0004c0025t0007g0294 a0004c0029t0003g0193 a0004c0029t0003g0203 a0004c0043t0003g0119 a0006c0021t0006g0019 a0006c0048t0006g0108 a0007c0028t0004g0017 a0007c0028t0004g0265 a0008c0036t0003g0277 a0008c0045t0003g0072 a0008c0061t0003g0210 a0014c0040t0004g0270	14	294	0.0476	23	c.153 others(42): Show c.1530-5061_1530-5039dupCACACCCATCCCGAGACACCACT	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	859744	C C	CAGTGGTG others(16): Show CAGTGGTGTCTCGGGGTGGGTGTG	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02896.hp1 HG01891.hp2 HG02896.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0048 a0001c0002t0001g0049 a0001c0002t0001g0048 a0001c0002t0001g0049	2	294	0.0068	23	c.153 others(42): Show c.1530-5039_1530-5038insCACACCCACCCCGAGACACCACT	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	859861	C C	CAGTGATG others(16): Show CAGTGATGTCACGGGATGGGTGTG	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0005 a0005	a0005c0034 a0005c0034	a0005c0034t0015 a0005c0034t0015	a0005c0034t0015g0274 a0005c0034t0015g0274	1	294	0.0034	23	c.153 others(42): Show c.1530-5156_1530-5155insCACACCCATCCCGTGACATCACT	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	859873	G G	GGGATGGG others(16): Show GGGATGGGTGTGCAGTGGTGTCAT	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0011 a0011	a0011c0039 a0011c0039	a0011c0039t0002 a0011c0039t0002	a0011c0039t0002g0264 a0011c0039t0002g0264	1	294	0.0034	23	c.153 others(42): Show c.1530-5168_1530-5167insATGACACCACTGCACACCCATCC	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	859909	A A	AGTGAGGT others(16): Show AGTGAGGTCACGGGATGGGTGTGT	intron_variant intron_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0010 a0010	a0010c0056 a0010c0056	a0010c0056t0009 a0010c0056t0009	a0010c0056t0009g0136 a0010c0056t0009g0136	1	294	0.0034	23	c.153 others(42): Show c.1530-5204_1530-5203insACACACCCATCCCGTGACCTCAC	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMNB1_chr5_126772136_126842020	126795933	C C	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0031 a0001c0001t0001g0031	1	374	0.0027	23	c.360 others(40): Show c.360-8827_360-8826insTTTTTTTTTTTTTTTTTTTTTTT	LMNB1	ENSG00000113368.12	transcript	ENST00000261366.10	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr5	TogoVar
LMNB1_chr5_126772136_126842020	126800981	A A	ATATATAT others(16): Show ATATATATATATATAATTTTTTTT	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG03704.hp2 NA19067.hp2 HG00639.hp2 HG03704.hp2 NA19067.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0327 a0001c0001t0001g0331 a0001c0001t0001g0349 a0001c0001t0001g0327 a0001c0001t0001g0331 a0001c0001t0001g0349	3	374	0.0080	23	c.360 others(40): Show c.360-3795_360-3794insTATATATATATATAATTTTTTTT	LMNB1	ENSG00000113368.12	transcript	ENST00000261366.10	protein_coding	1/10			chr5	TogoVar
LMNB2_chr19_2423166_2461959	2424805	A A	AGGTGGTG others(16): Show AGGTGGTGACGGCTGCAGTTCCCG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19054.hp2 NA19054.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0020 a0001c0002t0004g0020	1	356	0.0028	23	c.60 others(34): Show c.6083_*6105dupCGGGAACTGCAGCCGTCACCACC	LMNB2	ENSG00000176619.13	transcript	ENST00000325327.4	protein_coding		3360		chr19	TogoVar
LMO7_chr13_75631330_75864866	75632862	G G	GTTTTTTT others(16): Show GTTTTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01109.hp1 NA18946.hp1 NA18987.hp2 others(2): Show HG01109.hp1 NA18946.hp1 NA18987.hp2 NA19060.hp1 NA19063.hp1	a0002 a0003 a0006 a0002 a0003 a0006	a0002c0007 a0003c0002 a0006c0006 a0002c0007 a0003c0002 a0006c0006	a0002c0007t0004 a0003c0002t0001 a0006c0006t0001 a0002c0007t0004 a0003c0002t0001 a0006c0006t0001	a0002c0007t0004g0261 a0003c0002t0001g0193 a0003c0002t0001g0229 others(2): Show a0002c0007t0004g0261 a0003c0002t0001g0193 a0003c0002t0001g0229 a0003c0002t0001g0230 a0006c0006t0001g0132	5	272	0.0184	23	c.-37 others(34): Show c.-3796_-3795insTTTTTTTTTTTTTTTTTTTTTTT	LMO7	ENSG00000136153.20	transcript	ENST00000377534.8	protein_coding		3467		chr13	TogoVar
LMO7_chr13_75631330_75864866	75635406	G G	GCGCAAGC others(16): Show GCGCAAGCCGACCCGTGTGCCTCC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19082.hp2 NA19082.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0001 a0004c0004t0001	a0004c0004t0001g0202 a0004c0004t0001g0202	1	272	0.0037	23	c.-12 others(34): Show c.-1252_-1251insCGCAAGCCGACCCGTGTGCCTCC	LMO7	ENSG00000136153.20	transcript	ENST00000377534.8	protein_coding		923		chr13	TogoVar
LMO7_chr13_75631330_75864866	75766567	G G	GGGAGATG others(16): Show GGGAGATGGCCCTGTAAATTCACA	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00280.hp1 HG00280.hp2 others(222): Show HG00099.hp1 HG00280.hp1 HG00280.hp2 HG00438.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG01070.hp1 HG01070.hp2 HG01081.hp1 HG01099.hp2 HG01106.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp2 HG01257.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01952.hp1 HG01952.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02040.hp2 HG02056.hp1 HG02056.hp2 HG02074.hp1 HG02074.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02165.hp1 HG02165.hp2 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02523.hp1 HG02559.hp2 HG02647.hp1 HG02698.hp1 HG02698.hp2 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp2 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG03017.hp1 HG03041.hp1 HG03098.hp2 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03225.hp2 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18747.hp1 NA18940.hp1 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp1 NA18944.hp2 NA18946.hp1 NA18946.hp2 NA18949.hp2 NA18951.hp1 NA18951.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18960.hp1 NA18960.hp2 NA18965.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18987.hp1 NA18987.hp2 NA18990.hp1 NA18990.hp2 NA18993.hp1 NA18993.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19001.hp1 NA19001.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19063.hp1 NA19063.hp2 NA19065.hp1 NA19065.hp2 NA19070.hp1 NA19070.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19082.hp1 NA19082.hp2 NA19085.hp1 NA19085.hp2 NA19091.hp1 NA19091.hp2 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(17): Show a0001 a0002 a0003 a0004 a0005 a0007 a0008 a0009 a0010 a0011 a0012 a0013 a0014 a0015 a0018 a0019 a0020 a0021 a0022 a0023	a0001c0001 a0001c0019 a0001c0020 others(23): Show a0001c0001 a0001c0019 a0001c0020 a0001c0021 a0002c0003 a0002c0007 a0003c0002 a0004c0004 a0004c0013 a0004c0027 a0005c0005 a0007c0016 a0008c0008 a0009c0010 a0010c0012 a0011c0015 a0012c0014 a0013c0018 a0014c0017 a0015c0029 a0018c0028 a0019c0034 a0020c0033 a0021c0026 a0022c0025 a0023c0022	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(49): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0001c0019t0002 a0001c0020t0002 a0001c0021t0001 a0002c0003t0001 a0002c0003t0002 a0002c0003t0005 a0002c0007t0001 a0002c0007t0003 a0002c0007t0004 a0003c0002t0001 a0003c0002t0002 a0003c0002t0016 a0004c0004t0001 a0004c0004t0002 a0004c0004t0004 a0004c0004t0006 a0004c0004t0010 a0004c0004t0013 a0004c0013t0002 a0004c0027t0002 a0005c0005t0001 a0005c0005t0003 a0005c0005t0004 a0005c0005t0015 a0007c0016t0001 a0008c0008t0001 a0008c0008t0002 a0008c0008t0003 a0008c0008t0004 a0009c0010t0001 a0009c0010t0002 a0009c0010t0003 a0009c0010t0017 a0010c0012t0001 a0010c0012t0002 a0011c0015t0001 a0012c0014t0001 a0012c0014t0007 a0012c0014t0014 a0013c0018t0004 a0014c0017t0002 a0015c0029t0001 a0018c0028t0004 a0019c0034t0002 a0020c0033t0002 a0021c0026t0001 a0022c0025t0003 a0023c0022t0001	a0001c0001t0001g0109 a0001c0001t0001g0113 a0001c0001t0001g0116 others(221): Show a0001c0001t0001g0109 a0001c0001t0001g0113 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0135 a0001c0001t0001g0143 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0159 a0001c0001t0001g0167 a0001c0001t0001g0184 a0001c0001t0001g0201 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0218 a0001c0001t0002g0007 a0001c0001t0002g0008 a0001c0001t0002g0009 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0020 a0001c0001t0002g0021 a0001c0001t0002g0022 a0001c0001t0002g0023 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0026 a0001c0001t0002g0029 a0001c0001t0002g0034 a0001c0001t0002g0035 a0001c0001t0002g0036 a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0045 a0001c0001t0002g0047 a0001c0001t0002g0048 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0058 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0072 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0082 a0001c0001t0002g0083 a0001c0001t0002g0085 a0001c0001t0002g0088 a0001c0001t0002g0099 a0001c0001t0002g0101 a0001c0001t0002g0106 a0001c0001t0002g0107 a0001c0001t0002g0265 a0001c0001t0003g0153 a0001c0001t0008g0044 a0001c0019t0002g0267 a0001c0019t0002g0268 a0001c0020t0002g0269 a0001c0020t0002g0271 a0001c0021t0001g0182 a0002c0003t0001g0121 a0002c0003t0001g0137 a0002c0003t0001g0138 a0002c0003t0001g0139 a0002c0003t0001g0154 a0002c0003t0001g0192 a0002c0003t0001g0203 a0002c0003t0001g0211 a0002c0003t0001g0220 a0002c0003t0001g0238 a0002c0003t0001g0239 a0002c0003t0001g0240 a0002c0003t0002g0134 a0002c0003t0005g0033 a0002c0007t0001g0129 a0002c0007t0001g0234 a0002c0007t0003g0173 a0002c0007t0003g0176 a0002c0007t0003g0178 a0002c0007t0003g0180 a0002c0007t0003g0181 a0002c0007t0003g0246 a0002c0007t0004g0098 a0002c0007t0004g0260 a0002c0007t0004g0261 a0003c0002t0001g0006 a0003c0002t0001g0123 a0003c0002t0001g0141 a0003c0002t0001g0142 a0003c0002t0001g0157 a0003c0002t0001g0158 a0003c0002t0001g0179 a0003c0002t0001g0186 a0003c0002t0001g0191 a0003c0002t0001g0193 a0003c0002t0001g0194 a0003c0002t0001g0195 a0003c0002t0001g0196 a0003c0002t0001g0198 a0003c0002t0001g0200 a0003c0002t0001g0204 a0003c0002t0001g0205 a0003c0002t0001g0206 a0003c0002t0001g0209 a0003c0002t0001g0212 a0003c0002t0001g0213 a0003c0002t0001g0214 a0003c0002t0001g0215 a0003c0002t0001g0216 a0003c0002t0001g0217 a0003c0002t0001g0219 a0003c0002t0001g0222 a0003c0002t0001g0224 a0003c0002t0001g0225 a0003c0002t0001g0226 a0003c0002t0001g0227 a0003c0002t0001g0228 a0003c0002t0001g0229 a0003c0002t0001g0230 a0003c0002t0001g0233 a0003c0002t0001g0237 a0003c0002t0001g0243 a0003c0002t0002g0046 a0003c0002t0002g0064 a0003c0002t0002g0262 a0003c0002t0002g0266 a0003c0002t0002g0270 a0003c0002t0016g0223 a0004c0004t0001g0120 a0004c0004t0001g0148 a0004c0004t0001g0149 a0004c0004t0001g0187 a0004c0004t0001g0188 a0004c0004t0001g0190 a0004c0004t0001g0199 a0004c0004t0001g0202 a0004c0004t0001g0210 a0004c0004t0001g0231 a0004c0004t0001g0232 a0004c0004t0001g0235 a0004c0004t0001g0236 a0004c0004t0002g0032 a0004c0004t0002g0060 a0004c0004t0004g0081 a0004c0004t0006g0103 a0004c0004t0010g0119 a0004c0004t0013g0189 a0004c0013t0002g0019 a0004c0013t0002g0057 a0004c0013t0002g0059 a0004c0013t0002g0061 a0004c0013t0002g0104 a0004c0027t0002g0092 a0005c0005t0001g0114 a0005c0005t0001g0125 a0005c0005t0003g0112 a0005c0005t0003g0115 a0005c0005t0003g0124 a0005c0005t0003g0127 a0005c0005t0003g0128 a0005c0005t0003g0144 a0005c0005t0003g0145 a0005c0005t0003g0147 a0005c0005t0003g0164 a0005c0005t0004g0263 a0005c0005t0004g0264 a0005c0005t0015g0171 a0007c0016t0001g0001 a0007c0016t0001g0252 a0008c0008t0001g0089 a0008c0008t0002g0077 a0008c0008t0003g0005 a0008c0008t0003g0110 a0008c0008t0003g0111 a0008c0008t0003g0160 a0008c0008t0003g0168 a0008c0008t0003g0169 a0008c0008t0003g0241 a0008c0008t0004g0087 a0009c0010t0001g0248 a0009c0010t0001g0249 a0009c0010t0001g0250 a0009c0010t0002g0015 a0009c0010t0003g0244 a0009c0010t0017g0004 a0010c0012t0001g0140 a0010c0012t0001g0247 a0010c0012t0002g0105 a0011c0015t0001g0155 a0011c0015t0001g0197 a0011c0015t0001g0221 a0011c0015t0001g0242 a0012c0014t0001g0002 a0012c0014t0001g0003 a0012c0014t0007g0049 a0012c0014t0014g0185 a0013c0018t0004g0010 a0013c0018t0004g0011 a0013c0018t0004g0056 a0014c0017t0002g0027 a0014c0017t0002g0028 a0014c0017t0002g0037 a0015c0029t0001g0118 a0018c0028t0004g0133 a0019c0034t0002g0073 a0020c0033t0002g0074 a0021c0026t0001g0122 a0022c0025t0003g0177 a0023c0022t0001g0136	225	272	0.8272	23	c.317 others(40): Show c.317+5548_317+5549insCACAGGAGATGGCCCTGTAAATT	LMO7	ENSG00000136153.20	transcript	ENST00000377534.8	protein_coding	4/30		INFO_REALIGN_3_PRIME	chr13	TogoVar
LMOD1_chr1_201891456_201951548	201947181	G G	GAGAGAGA others(16): Show GAGAGAGAGAGAGAGAGAGAGAGA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02071.hp2 NA18942.hp1 NA19043.hp1 HG02071.hp2 NA18942.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0083 a0001c0001t0001g0175 a0001c0001t0001g0358 a0001c0001t0001g0083 a0001c0001t0001g0175 a0001c0001t0001g0358	3	400	0.0075	23	c.-84 others(32): Show c.-842_-841insTCTCTCTCTCTCTCTCTCTCTCT	LMOD1	ENSG00000163431.14	transcript	ENST00000367288.5	protein_coding		634		chr1	TogoVar
LMOD1_chr1_201891456_201951548	201948342	A A	AAAGAAAG others(16): Show AAAGAAAGAAAGAAAGAAAGAAAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01070.hp2 HG01070.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0265 a0001c0001t0001g0265	1	400	0.0025	23	c.-20 others(34): Show c.-2003_-2002insCTTTCTTTCTTTCTTTCTTTCTT	LMOD1	ENSG00000163431.14	transcript	ENST00000367288.5	protein_coding		1795		chr1	TogoVar
LMX1A_chr1_165196867_165361715	165247054	C C	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01256.hp1 HG01258.hp1 HG02738.hp2 HG01256.hp1 HG01258.hp1 HG02738.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0005 a0001c0002t0001 a0001c0002t0009 a0001c0001t0005 a0001c0002t0001 a0001c0002t0009	a0001c0001t0005g0068 a0001c0002t0001g0142 a0001c0002t0009g0012 a0001c0001t0005g0068 a0001c0002t0001g0142 a0001c0002t0009g0012	3	288	0.0104	23	c.496 others(40): Show c.496+2331_496+2353dupAAAAAAAAAAAAAAAAAAAAAAA	LMX1A	ENSG00000162761.14	transcript	ENST00000342310.7	protein_coding	4/8			chr1	TogoVar
LNX1_chr4_53454301_53596486	53495548	C C	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01516.hp1 HG01099.hp2 HG01516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0074 a0001c0001t0004g0075 a0001c0001t0004g0074 a0001c0001t0004g0075	2	356	0.0056	23	c.135 others(40): Show c.1350+474_1350+475insAAAAAAAAAAAAAAAAAAAAAAA	LNX1	ENSG00000072201.14	transcript	ENST00000263925.8	protein_coding	6/10			chr4	TogoVar
LNX1_chr4_53454301_53596486	53506856	T T	TAAAAAAA others(16): Show TAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG03209.hp2 HG03453.hp1 HG02258.hp2 HG03209.hp2 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0117 a0001c0001t0002g0221 a0001c0001t0002g0346 a0001c0001t0002g0117 a0001c0001t0002g0221 a0001c0001t0002g0346	3	356	0.0084	23	c.775 others(38): Show c.775+460_775+461insTTTTTTTTTTTTTTTTTTTTTTT	LNX1	ENSG00000072201.14	transcript	ENST00000263925.8	protein_coding	4/10			chr4	TogoVar
LNX2_chr13_27540913_27625529	27611742	A A	ATATGGGA others(16): Show ATATGGGAAAAAAGAATGTCAAAT	intron_variant intron_variant	MODIFIER	NA19058.hp2 NA19058.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0275 a0001c0001t0003g0275	1	358	0.0028	23	c.-10 others(42): Show c.-101+8610_-101+8632dupATTTGACATTCTTTTTTCCCATA	LNX2	ENSG00000139517.9	transcript	ENST00000316334.5	protein_coding	1/9			chr13	TogoVar
LOC114841035_chr11_64236095_64249132	64237126	G G	GACAGAGA others(16): Show GACAGAGACAGACAGAGACAGACA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00733.hp2 HG00733.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0001	1	330	0.0030	23	c.-41 others(34): Show c.-4154_-4153insACAGAGACAGACAGAGACAGACA	LOC114841035	ENSG00000286264.2	transcript	ENST00000652762.2	protein_coding		3968		chr11	TogoVar
LOC122539214_chr19_52645447_52695496	52687635	A A	ATATATAT others(16): Show ATATATATATATATATAATGTGTG	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0014 a0014	a0014c0022 a0014c0022	a0014c0022t0005 a0014c0022t0005	a0014c0022t0005g0429 a0014c0022t0005g0429	1	452	0.0022	23	c.-20 others(40): Show c.-20+2807_-20+2808insCACACATTATATATATATATATA	LOC122539214	ENSG00000269825.3	transcript	ENST00000598322.3	protein_coding	1/3			chr19	TogoVar
LOC127903862_chr6_16323342_16333431	16330410	G G	GAAAAGGT others(16): Show GAAAAGGTCTTGCTTCGTTGCTCA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0000 a0001c0001t0000g0000	1	430	0.0023	23	c.-20 others(34): Show c.-2002_-1980dupTGAGCAACGAAGCAAGACCTTTT	LOC127903862	ENSG00000288708.1	transcript	ENST00000683730.1	protein_coding		1980		chr6	TogoVar
LOC128462377_chr16_89312046_89423292	89384879	C C	CTTTTTTT others(16): Show CTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01071.hp1 HG01071.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0266 a0001c0001t0000g0266	1	366	0.0027	23	c.9+3 others(38): Show c.9+33382_9+33404dupAAAAAAAAAAAAAAAAAAAAAAA	LOC128462377	ENSG00000288715.2	transcript	ENST00000711617.1	protein_coding	1/1			chr16	TogoVar

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