Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
GPT2_chr16_46879362_46936289	46898979	T T	TATGTGTA others(17): Show TATGTGTATATATATACACACACAC	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00735.hp1 HG01074.hp1 others(1): Show HG00642.hp2 HG00735.hp1 HG01074.hp1 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0050 a0001c0001t0001g0073 a0001c0001t0001g0074 others(1): Show a0001c0001t0001g0050 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0110	4	194	0.0206	24	c.333 others(41): Show c.333+1244_333+1245insGTGTATATATATACACACACACAT	GPT2	ENSG00000166123.14	transcript	ENST00000340124.9	protein_coding	3/11		INFO_REALIGN_3_PRIME	chr16	TogoVar
GRAMD1B_chr11_123425269_123632767	123449714	C C	CTTTTTTT others(17): Show CTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01361.hp1 HG01361.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0014 a0001c0001t0001g0014	1	282	0.0036	24	c.374 others(43): Show c.374+18565_374+18566insTTTTTTTTTTTTTTTTTTTTTTTT	GRAMD1B	ENSG00000023171.20	transcript	ENST00000635736.2	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr11	TogoVar
GRAMD1B_chr11_123425269_123632767	123469769	C C	CTCCTTCC others(17): Show CTCCTTCCTTCCTTCCTTCCTTCCT	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0070 a0001c0001t0070	a0001c0001t0070g0213 a0001c0001t0070g0213	1	282	0.0036	24	c.375 others(43): Show c.375-11045_375-11044insCTTCCTTCCTTCCTTCCTTCCTTC	GRAMD1B	ENSG00000023171.20	transcript	ENST00000635736.2	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr11	TogoVar
GRAMD1B_chr11_123425269_123632767	123513605	C C	CCTTTCTT others(17): Show CCTTTCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02040.hp1 HG02738.hp2 NA18986.hp2 others(2): Show HG02040.hp1 HG02738.hp2 NA18986.hp2 NA19010.hp1 NA19065.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0001 a0001c0001t0012 a0001c0002t0010 others(1): Show a0001c0001t0001 a0001c0001t0012 a0001c0002t0010 a0001c0004t0027	a0001c0001t0001g0159 a0001c0001t0001g0186 a0001c0001t0012g0185 others(2): Show a0001c0001t0001g0159 a0001c0001t0001g0186 a0001c0001t0012g0185 a0001c0002t0010g0129 a0001c0004t0027g0079	5	282	0.0177	24	c.452 others(43): Show c.452+32715_452+32716insTCTTTCTTTCTTTCTTTCTTTCTT	GRAMD1B	ENSG00000023171.20	transcript	ENST00000635736.2	protein_coding	2/19		INFO_REALIGN_3_PRIME	chr11	TogoVar
GRAMD1B_chr11_123425269_123632767	123513609	C C	CCTTTCTT others(17): Show CCTTTCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02056.hp2 HG02738.hp1 NA18964.hp2 others(1): Show HG02056.hp2 HG02738.hp1 NA18964.hp2 NA19007.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0016 a0002c0010 a0001c0001 a0001c0016 a0002c0010	a0001c0001t0001 a0001c0001t0013 a0001c0016t0023 others(1): Show a0001c0001t0001 a0001c0001t0013 a0001c0016t0023 a0002c0010t0024	a0001c0001t0001g0040 a0001c0001t0013g0156 a0001c0016t0023g0147 others(1): Show a0001c0001t0001g0040 a0001c0001t0013g0156 a0001c0016t0023g0147 a0002c0010t0024g0060	4	282	0.0142	24	c.452 others(43): Show c.452+32719_452+32720insTCTTTCTTTCTTTCTTTCTTTCTT	GRAMD1B	ENSG00000023171.20	transcript	ENST00000635736.2	protein_coding	2/19		INFO_REALIGN_3_PRIME	chr11	TogoVar
GRAMD1B_chr11_123425269_123632767	123513613	C C	CCTTTCTT others(17): Show CCTTTCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01243.hp2 HG03710.hp2 HG01109.hp1 HG01243.hp2 HG03710.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0029 a0001c0002t0059 a0001c0001t0001 a0001c0001t0029 a0001c0002t0059	a0001c0001t0001g0084 a0001c0001t0029g0218 a0001c0002t0059g0080 a0001c0001t0001g0084 a0001c0001t0029g0218 a0001c0002t0059g0080	3	282	0.0106	24	c.452 others(43): Show c.452+32723_452+32724insTCTTTCTTTCTTTCTTTCTTTCTT	GRAMD1B	ENSG00000023171.20	transcript	ENST00000635736.2	protein_coding	2/19		INFO_REALIGN_3_PRIME	chr11	TogoVar
GRAMD1B_chr11_123425269_123632767	123513617	C C	CCTTCCTT others(17): Show CCTTCCTTCCTTCCTTCCTTCCTTT	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG00621.hp2	a0005 a0005	a0005c0012 a0005c0012	a0005c0012t0035 a0005c0012t0035	a0005c0012t0035g0146 a0005c0012t0035g0146	1	282	0.0036	24	c.452 others(43): Show c.452+32727_452+32728insCCTTCCTTCCTTCCTTCCTTTCTT	GRAMD1B	ENSG00000023171.20	transcript	ENST00000635736.2	protein_coding	2/19		INFO_REALIGN_3_PRIME	chr11	TogoVar
GRAMD1B_chr11_123425269_123632767	123513617	C C	CCTTCCTT others(17): Show CCTTCCTTCCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01192.hp2 HG01243.hp1 others(2): Show HG01074.hp2 HG01192.hp2 HG01243.hp1 HG02896.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0002 a0001c0001t0011 a0001c0001t0061 others(2): Show a0001c0001t0002 a0001c0001t0011 a0001c0001t0061 a0001c0002t0024 a0001c0003t0008	a0001c0001t0002g0053 a0001c0001t0011g0112 a0001c0001t0061g0246 others(2): Show a0001c0001t0002g0053 a0001c0001t0011g0112 a0001c0001t0061g0246 a0001c0002t0024g0140 a0001c0003t0008g0032	5	282	0.0177	24	c.452 others(43): Show c.452+32727_452+32728insCCTTCCTTTCTTTCTTTCTTTCTT	GRAMD1B	ENSG00000023171.20	transcript	ENST00000635736.2	protein_coding	2/19		INFO_REALIGN_3_PRIME	chr11	TogoVar
GRAMD1B_chr11_123425269_123632767	123513617	C C	CCTTCCTT others(17): Show CCTTCCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01168.hp1 homoSapiens_chm13v2.hp1 HG00741.hp2 HG01168.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0015 a0001c0001 a0001c0015	a0001c0001t0001 a0001c0001t0016 a0001c0015t0007 a0001c0001t0001 a0001c0001t0016 a0001c0015t0007	a0001c0001t0001g0164 a0001c0001t0016g0200 a0001c0015t0007g0125 a0001c0001t0001g0164 a0001c0001t0016g0200 a0001c0015t0007g0125	3	282	0.0106	24	c.452 others(43): Show c.452+32727_452+32728insCCTTTCTTTCTTTCTTTCTTTCTT	GRAMD1B	ENSG00000023171.20	transcript	ENST00000635736.2	protein_coding	2/19		INFO_REALIGN_3_PRIME	chr11	TogoVar
GRAMD1B_chr11_123425269_123632767	123513617	C C	CCTTTCTT others(17): Show CCTTTCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00639.hp2 HG01109.hp2 others(7): Show HG00323.hp1 HG00639.hp2 HG01109.hp2 HG02451.hp1 HG02647.hp2 HG02896.hp1 HG02897.hp1 HG02970.hp2 NA19091.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 others(4): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0009 a0001c0001t0012 a0001c0001t0020 a0001c0002t0023	a0001c0001t0002g0237 a0001c0001t0003g0075 a0001c0001t0006g0267 others(7): Show a0001c0001t0002g0237 a0001c0001t0003g0075 a0001c0001t0006g0267 a0001c0001t0009g0224 a0001c0001t0009g0225 a0001c0001t0012g0023 a0001c0001t0020g0002 a0001c0001t0020g0003 a0001c0001t0020g0230 a0001c0002t0023g0176	10	282	0.0355	24	c.452 others(43): Show c.452+32729_452+32752dupCTTTCTTTCTTTCTTTCTTTCTTT	GRAMD1B	ENSG00000023171.20	transcript	ENST00000635736.2	protein_coding	2/19		INFO_REALIGN_3_PRIME	chr11	TogoVar
GRAMD1C_chr3_113833788_113952174	113900409	A A	AATTATTA others(17): Show AATTATTATTATTATTATTATTATT	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG02074.hp2 HG02922.hp1 others(4): Show HG00323.hp2 HG02074.hp2 HG02922.hp1 HG06807.hp2 NA18939.hp2 NA18948.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004	a0001c0001t0001 a0001c0001t0014 a0001c0001t0021 others(3): Show a0001c0001t0001 a0001c0001t0014 a0001c0001t0021 a0001c0002t0003 a0001c0003t0002 a0001c0004t0004	a0001c0001t0001g0246 a0001c0001t0014g0143 a0001c0001t0021g0287 others(4): Show a0001c0001t0001g0246 a0001c0001t0014g0143 a0001c0001t0021g0287 a0001c0002t0003g0026 a0001c0003t0002g0114 a0001c0003t0002g0235 a0001c0004t0004g0050	7	324	0.0216	24	c.541 others(39): Show c.541-618_541-595dupATTATTATTATTATTATTATTATT	GRAMD1C	ENSG00000178075.20	transcript	ENST00000358160.9	protein_coding	6/17		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRAMD1C_chr3_113833788_113952174	113911173	G G	GACACACA others(17): Show GACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	NA18950.hp1 NA18950.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0095 a0001c0002t0003g0095	1	324	0.0031	24	c.952 others(41): Show c.952+2069_952+2070insACACACACACACACACACACACAC	GRAMD1C	ENSG00000178075.20	transcript	ENST00000358160.9	protein_coding	9/17		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRAMD2A_chr15_72154806_72202787	72157563	C C	CATATATA others(17): Show CATATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02970.hp1 HG03130.hp1 HG02970.hp1 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0190 a0001c0001t0001g0239 a0001c0001t0001g0190 a0001c0001t0001g0239	2	366	0.0055	24	c.44 others(35): Show c.4445_*4446insATATATATATATATATATATATAT	GRAMD2A	ENSG00000175318.12	transcript	ENST00000309731.12	protein_coding		2242		chr15	TogoVar
GRAMD2B_chr5_126418409_126499364	126495454	G G	GTATATAT others(17): Show GTATATATATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0235 a0001c0001t0006g0235	1	334	0.0030	24	c.24 others(35): Show c.2498_*2499insTATATATATATATATATATATATA	GRAMD2B	ENSG00000155324.10	transcript	ENST00000285689.8	protein_coding		1091		chr5	TogoVar
GRAMD4_chr22_46615386_46684785	46648907	G G	GATGGATG others(17): Show GATGGATGGATGGATGGATGGATGC	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02647.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0054 a0001c0001t0054	a0001c0001t0054g0251 a0001c0001t0054g0251	1	328	0.0031	24	c.284 others(41): Show c.284-9257_284-9256insCATGGATGGATGGATGGATGGATG	GRAMD4	ENSG00000075240.17	transcript	ENST00000406902.6	protein_coding	3/18		INFO_REALIGN_3_PRIME	chr22	TogoVar
GRAMD4_chr22_46615386_46684785	46648915	G G	GATGGATG others(17): Show GATGGATGGATGGATGGATGGATGC	intron_variant intron_variant	MODIFIER	HG00639.hp1 NA19002.hp2 HG00639.hp1 NA19002.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0281 a0001c0001t0002g0290 a0001c0001t0002g0281 a0001c0001t0002g0290	2	328	0.0061	24	c.284 others(41): Show c.284-9253_284-9252insGATGCATGGATGGATGGATGGATG	GRAMD4	ENSG00000075240.17	transcript	ENST00000406902.6	protein_coding	3/18		INFO_REALIGN_3_PRIME	chr22	TogoVar
GRAMD4_chr22_46615386_46684785	46648947	G G	GATGGATG others(17): Show GATGGATGGATGGATGGATGGATGC	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01106.hp1 HG01168.hp1 others(4): Show HG00738.hp2 HG01106.hp1 HG01168.hp1 HG01978.hp1 HG02683.hp1 HG03942.hp1 HG04199.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0009 a0001c0001t0005 a0001c0001t0009	a0001c0001t0005g0144 a0001c0001t0005g0211 a0001c0001t0005g0258 others(4): Show a0001c0001t0005g0144 a0001c0001t0005g0211 a0001c0001t0005g0258 a0001c0001t0009g0047 a0001c0001t0009g0048 a0001c0001t0009g0050 a0001c0001t0009g0056	7	328	0.0213	24	c.284 others(41): Show c.284-9217_284-9216insCATGGATGGATGGATGGATGGATG	GRAMD4	ENSG00000075240.17	transcript	ENST00000406902.6	protein_coding	3/18		INFO_REALIGN_3_PRIME	chr22	TogoVar
GRAMD4_chr22_46615386_46684785	46648967	G G	GATGCATG others(17): Show GATGCATGGATGGATGGATGGATGC	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02922.hp2 HG02976.hp2 others(1): Show HG02622.hp2 HG02922.hp2 HG02976.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0010 a0001c0001t0033 a0001c0001t0004 a0001c0001t0010 a0001c0001t0033	a0001c0001t0004g0035 a0001c0001t0004g0036 a0001c0001t0010g0034 others(1): Show a0001c0001t0004g0035 a0001c0001t0004g0036 a0001c0001t0010g0034 a0001c0001t0033g0037	4	328	0.0122	24	c.284 others(41): Show c.284-9217_284-9216insCATGGATGGATGGATGGATGCATG	GRAMD4	ENSG00000075240.17	transcript	ENST00000406902.6	protein_coding	3/18		INFO_REALIGN_3_PRIME	chr22	TogoVar
GRAMD4_chr22_46615386_46684785	46680604	A A	ACCCATTC others(17): Show ACCCATTCATCCATCCATCCGTCCT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0034 a0001c0001t0010g0034	1	328	0.0031	24	c.33 others(35): Show c.3353_*3354insCCCATTCATCCATCCATCCGTCCT	GRAMD4	ENSG00000075240.17	transcript	ENST00000406902.6	protein_coding		820		chr22	TogoVar
GRAMD4_chr22_46615386_46684785	46680721	C C	CCCACCCA others(17): Show CCCACCCATCCATCCACCCACCCAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00642.hp2 HG01070.hp2 HG01243.hp1 others(8): Show HG00642.hp2 HG01070.hp2 HG01243.hp1 HG02451.hp2 HG02486.hp2 HG02559.hp1 HG02615.hp1 HG02630.hp1 HG03225.hp1 HG03471.hp1 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0013 a0001c0001t0007 a0001c0001t0013	a0001c0001t0007g0022 a0001c0001t0007g0023 a0001c0001t0007g0024 others(8): Show a0001c0001t0007g0022 a0001c0001t0007g0023 a0001c0001t0007g0024 a0001c0001t0007g0025 a0001c0001t0007g0026 a0001c0001t0007g0027 a0001c0001t0007g0028 a0001c0001t0007g0029 a0001c0001t0007g0033 a0001c0001t0013g0020 a0001c0001t0013g0055	11	328	0.0335	24	c.34 others(35): Show c.3470_*3471insCCACCCATCCATCCACCCACCCAT	GRAMD4	ENSG00000075240.17	transcript	ENST00000406902.6	protein_coding		937		chr22	TogoVar
GREB1_chr2_11529045_11647788	11538910	C C	CCTTCCCC others(17): Show CCTTCCCCCTCCCCTCCCCTCCTAT	intron_variant intron_variant	MODIFIER	HG02083.hp1 HG02083.hp1	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0008 a0004c0004t0008	a0004c0004t0008g0273 a0004c0004t0008g0273	1	308	0.0033	24	c.-16 others(43): Show c.-162+4657_-162+4658insTTCCCCCTCCCCTCCCCTCCTATC	GREB1	ENSG00000196208.14	transcript	ENST00000381486.7	protein_coding	1/32		INFO_REALIGN_3_PRIME	chr2	TogoVar
GREB1_chr2_11529045_11647788	11587741	A A	ACACACAC others(17): Show ACACACACACACACACACACGCGCG	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01175.hp1 HG01496.hp1 others(7): Show HG01074.hp2 HG01175.hp1 HG01496.hp1 HG02071.hp1 HG02148.hp2 HG02615.hp2 HG03540.hp2 NA18979.hp2 NA19003.hp1 NA19003.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0005 a0006 a0040	a0001c0001 a0002c0034 a0003c0003 others(5): Show a0001c0001 a0002c0034 a0003c0003 a0003c0076 a0005c0002 a0006c0056 a0006c0064 a0040c0072	a0001c0001t0002 a0002c0034t0031 a0003c0003t0005 others(6): Show a0001c0001t0002 a0002c0034t0031 a0003c0003t0005 a0003c0076t0007 a0005c0002t0003 a0005c0002t0016 a0006c0056t0070 a0006c0064t0012 a0040c0072t0058	a0001c0001t0002g0232 a0002c0034t0031g0263 a0003c0003t0005g0130 others(7): Show a0001c0001t0002g0232 a0002c0034t0031g0263 a0003c0003t0005g0130 a0003c0003t0005g0270 a0003c0076t0007g0102 a0005c0002t0003g0117 a0005c0002t0016g0164 a0006c0056t0070g0179 a0006c0064t0012g0078 a0040c0072t0058g0111	10	308	0.0325	24	c.116 others(43): Show c.1160-1004_1160-1003insACACACACACACACACACGCGCGC	GREB1	ENSG00000196208.14	transcript	ENST00000381486.7	protein_coding	9/32		INFO_REALIGN_3_PRIME	chr2	TogoVar
GREB1_chr2_11529045_11647788	11587741	A A	ACACACAC others(17): Show ACACACACACACACACACGCGCGCG	intron_variant intron_variant	MODIFIER	NA18966.hp2 NA18966.hp2	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0001 a0002c0005t0001	a0002c0005t0001g0066 a0002c0005t0001g0066	1	308	0.0033	24	c.116 others(43): Show c.1160-1004_1160-1003insACACACACACACACACGCGCGCGC	GREB1	ENSG00000196208.14	transcript	ENST00000381486.7	protein_coding	9/32		INFO_REALIGN_3_PRIME	chr2	TogoVar
GREB1_chr2_11529045_11647788	11587741	A A	ACACACAC others(17): Show ACACACACACACACACGCGCGCGCG	intron_variant intron_variant	MODIFIER	NA18950.hp1 NA18950.hp1	a0005 a0005	a0005c0002 a0005c0002	a0005c0002t0003 a0005c0002t0003	a0005c0002t0003g0151 a0005c0002t0003g0151	1	308	0.0033	24	c.116 others(43): Show c.1160-1004_1160-1003insACACACACACACACGCGCGCGCGC	GREB1	ENSG00000196208.14	transcript	ENST00000381486.7	protein_coding	9/32		INFO_REALIGN_3_PRIME	chr2	TogoVar
GREB1_chr2_11529045_11647788	11636936	G G	GGGTATGG others(17): Show GGGTATGGGCAGGGGCAGGGACAGA	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG02922.hp2 HG03453.hp2 others(2): Show HG01070.hp2 HG02922.hp2 HG03453.hp2 HG03516.hp2 NA19030.hp1	a0014 a0032 a0039 a0014 a0032 a0039	a0014c0023 a0032c0048 a0039c0074 a0014c0023 a0032c0048 a0039c0074	a0014c0023t0014 a0032c0048t0014 a0039c0074t0014 a0014c0023t0014 a0032c0048t0014 a0039c0074t0014	a0014c0023t0014g0068 a0014c0023t0014g0071 a0014c0023t0014g0073 others(2): Show a0014c0023t0014g0068 a0014c0023t0014g0071 a0014c0023t0014g0073 a0032c0048t0014g0008 a0039c0074t0014g0301	5	308	0.0162	24	c.534 others(41): Show c.5347-779_5347-778insGTATGGGCAGGGGCAGGGACAGAG	GREB1	ENSG00000196208.14	transcript	ENST00000381486.7	protein_coding	30/32		INFO_REALIGN_3_PRIME	chr2	TogoVar
GREM1_chr15_32713004_32750106	32713308	C C	CAAAAAAA others(17): Show CAAAAAAAAAAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00642.hp2 HG00738.hp2 others(4): Show HG00099.hp2 HG00642.hp2 HG00738.hp2 HG01169.hp1 HG01257.hp1 HG03710.hp1 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0037 a0001c0001t0040 others(4): Show a0001c0001t0017 a0001c0001t0037 a0001c0001t0040 a0001c0001t0084 a0001c0001t0089 a0001c0001t0091 a0001c0001t0098	a0001c0001t0017g0003 a0001c0001t0037g0003 a0001c0001t0040g0003 others(4): Show a0001c0001t0017g0003 a0001c0001t0037g0003 a0001c0001t0040g0003 a0001c0001t0084g0003 a0001c0001t0089g0003 a0001c0001t0091g0106 a0001c0001t0098g0099	7	421	0.0166	24	c.-48 others(35): Show c.-4855_-4854insAAAAAAAAAAAAAAAAAAAAAAAA	GREM1	ENSG00000166923.12	transcript	ENST00000651154.1	protein_coding		4695		chr15	TogoVar
GREM2_chr1_240484573_240617155	240547532	T T	TATAGACA others(17): Show TATAGACAGATAGATAGATAGATAG	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0122 a0001c0001t0011g0122	1	376	0.0027	24	c.-1- others(41): Show c.-1-54057_-1-54056insCTATCTATCTATCTATCTGTCTAT	GREM2	ENSG00000180875.5	transcript	ENST00000318160.5	protein_coding	1/1			chr1	TogoVar
GREM2_chr1_240484573_240617155	240547532	T T	TATATATA others(17): Show TATATATATATAGACAGATAGATAG	intron_variant intron_variant	MODIFIER	HG01891.hp1 NA18948.hp1 HG01891.hp1 NA18948.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0001 a0001c0001t0006	a0001c0001t0001g0101 a0001c0001t0006g0179 a0001c0001t0001g0101 a0001c0001t0006g0179	2	376	0.0053	24	c.-1- others(41): Show c.-1-54057_-1-54056insCTATCTATCTGTCTATATATATAT	GREM2	ENSG00000180875.5	transcript	ENST00000318160.5	protein_coding	1/1			chr1	TogoVar
GRHL1_chr2_9946693_10007277	9979151	C C	CAAAAAAA others(17): Show CAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00544.hp2 HG01192.hp1 others(16): Show HG00280.hp2 HG00544.hp2 HG01192.hp1 HG01261.hp1 HG01261.hp2 HG01496.hp2 HG01978.hp1 HG01978.hp2 NA18946.hp1 NA18962.hp1 NA18967.hp2 NA18970.hp1 NA18978.hp1 NA18997.hp1 NA19009.hp1 NA19064.hp1 NA19065.hp1 NA19070.hp2 NA19074.hp1	a0002 a0004 a0002 a0004	a0002c0002 a0004c0004 a0002c0002 a0004c0004	a0002c0002t0002 a0004c0004t0005 a0002c0002t0002 a0004c0004t0005	a0002c0002t0002g0148 a0002c0002t0002g0166 a0002c0002t0002g0167 others(16): Show a0002c0002t0002g0148 a0002c0002t0002g0166 a0002c0002t0002g0167 a0002c0002t0002g0168 a0002c0002t0002g0169 a0002c0002t0002g0198 a0002c0002t0002g0199 a0002c0002t0002g0207 a0002c0002t0002g0213 a0002c0002t0002g0214 a0002c0002t0002g0215 a0002c0002t0002g0216 a0002c0002t0002g0217 a0002c0002t0002g0218 a0002c0002t0002g0221 a0002c0002t0002g0222 a0002c0002t0002g0253 a0002c0002t0002g0254 a0004c0004t0005g0039	19	418	0.0455	24	c.111 others(43): Show c.1111-6957_1111-6956insAAAAAAAAAAAAAAAAAAAAAAAA	GRHL1	ENSG00000134317.18	transcript	ENST00000324907.14	protein_coding	8/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
GRHL1_chr2_9946693_10007277	9996426	C C	CCCTGTAC others(17): Show CCCTGTACAAAATGAAAGGACAAGT	intron_variant intron_variant	MODIFIER	NA18987.hp2 NA18987.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0255 a0001c0001t0001g0255	1	418	0.0024	24	c.167 others(39): Show c.1677+26_1677+49dupCCTGTACAAAATGAAAGGACAAGT	GRHL1	ENSG00000134317.18	transcript	ENST00000324907.14	protein_coding	14/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
GRHL1_chr2_9946693_10007277	9998652	A A	ATGTACAC others(17): Show ATGTACACATATATACATATATATG	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00639.hp2	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0002 a0001c0009t0002	a0001c0009t0002g0096 a0001c0009t0002g0096	1	418	0.0024	24	c.167 others(41): Show c.1678-312_1678-311insGTACACATATATACATATATATGT	GRHL1	ENSG00000134317.18	transcript	ENST00000324907.14	protein_coding	14/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
GRHL1_chr2_9946693_10007277	9998708	A A	ATATATAT others(17): Show ATATATATGTACACACATATATACG	intron_variant intron_variant	MODIFIER	HG01346.hp2 HG02809.hp2 HG01346.hp2 HG02809.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0238 a0001c0001t0001g0291 a0001c0001t0001g0238 a0001c0001t0001g0291	2	418	0.0048	24	c.167 others(41): Show c.1678-225_1678-202dupGTACACACATATATACGTATATAT	GRHL1	ENSG00000134317.18	transcript	ENST00000324907.14	protein_coding	14/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
GRHL1_chr2_9946693_10007277	9998719	C C	CACATATA others(17): Show CACATATATATATACATATATATGT	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01074.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0184 a0002c0002t0002g0184	1	418	0.0024	24	c.167 others(41): Show c.1678-243_1678-242insTATATATATACATATATATGTACA	GRHL1	ENSG00000134317.18	transcript	ENST00000324907.14	protein_coding	14/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
GRHL1_chr2_9946693_10007277	9998758	A A	ATATATGT others(17): Show ATATATGTACACATATATATATACG	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02897.hp2 HG02895.hp1 HG02897.hp2	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0001 a0005c0005t0001	a0005c0005t0001g0242 a0005c0005t0001g0243 a0005c0005t0001g0242 a0005c0005t0001g0243	2	418	0.0048	24	c.167 others(41): Show c.1678-202_1678-201insGTACACATATATATATACGTATAT	GRHL1	ENSG00000134317.18	transcript	ENST00000324907.14	protein_coding	14/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
GRHL1_chr2_9946693_10007277	9998811	T T	TATATATG others(17): Show TATATATGTACACATATATATATAC	intron_variant intron_variant	MODIFIER	NA18978.hp1 NA18978.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0166 a0002c0002t0002g0166	1	418	0.0024	24	c.167 others(41): Show c.1678-148_1678-147insGTACACATATATATATACATATAT	GRHL1	ENSG00000134317.18	transcript	ENST00000324907.14	protein_coding	14/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
GRHL1_chr2_9946693_10007277	10006039	G G	GCTGATTG others(17): Show GCTGATTGGTCCATTTTACAGAGAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02630.hp2 HG02895.hp1 HG02897.hp2 others(5): Show HG02630.hp2 HG02895.hp1 HG02897.hp2 HG03130.hp2 HG03209.hp1 HG03516.hp1 HG03540.hp2 NA18906.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0005c0005 a0001c0001 a0005c0005	a0001c0001t0001 a0005c0005t0001 a0001c0001t0001 a0005c0005t0001	a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 others(5): Show a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0084 a0005c0005t0001g0242 a0005c0005t0001g0243	8	418	0.0191	24	c.53 others(35): Show c.5332_*5333insCTGATTGGTCCATTTTACAGAGAC	GRHL1	ENSG00000134317.18	transcript	ENST00000324907.14	protein_coding		3763		chr2	TogoVar
GRHL2_chr8_101487439_101674726	101515022	T T	TTTCCTTC others(17): Show TTTCCTTCCTTCCTTCCTTCCATCC	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02717.hp2 HG02922.hp1 others(4): Show HG02647.hp2 HG02717.hp2 HG02922.hp1 HG03516.hp1 HG03540.hp1 HG03579.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0013 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0013 a0001c0001t0028 a0001c0001t0029 a0001c0005t0011	a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0002g0058 others(4): Show a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0002g0058 a0001c0001t0013g0091 a0001c0001t0028g0059 a0001c0001t0029g0055 a0001c0005t0011g0048	7	306	0.0229	24	c.20+ others(41): Show c.20+22250_20+22273dupTTCCATCCTTCCTTCCTTCCTTCC	GRHL2	ENSG00000083307.12	transcript	ENST00000646743.1	protein_coding	1/15		INFO_REALIGN_3_PRIME	chr8	TogoVar
GRHL2_chr8_101487439_101674726	101522721	T T	TTATACAT others(17): Show TTATACATATACATATACATATACA	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01261.hp2 HG02280.hp1 others(5): Show HG00738.hp2 HG01261.hp2 HG02280.hp1 HG02738.hp2 HG03209.hp1 HG03209.hp2 NA18612.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0004 a0001c0001t0019 others(3): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0019 a0001c0001t0027 a0001c0001t0050 a0001c0002t0005	a0001c0001t0002g0242 a0001c0001t0002g0285 a0001c0001t0004g0088 others(5): Show a0001c0001t0002g0242 a0001c0001t0002g0285 a0001c0001t0004g0088 a0001c0001t0004g0191 a0001c0001t0019g0237 a0001c0001t0027g0026 a0001c0001t0050g0190 a0001c0002t0005g0039	8	306	0.0261	24	c.21- others(41): Show c.21-20498_21-20497insCATATACATATACATATACATATA	GRHL2	ENSG00000083307.12	transcript	ENST00000646743.1	protein_coding	1/15		INFO_REALIGN_3_PRIME	chr8	TogoVar
GRHL2_chr8_101487439_101674726	101652438	G G	GGTGTGTG others(17): Show GGTGTGTGTGTCTGGTGTGTGTGGT	intron_variant intron_variant	MODIFIER	HG01515.hp2 HG01517.hp2 HG01515.hp2 HG01517.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0129 a0001c0001t0006g0130 a0001c0001t0006g0129 a0001c0001t0006g0130	2	306	0.0065	24	c.169 others(43): Show c.1698+2948_1698+2949insTCTGGTGTGTGTGGTGTGTGTGTG	GRHL2	ENSG00000083307.12	transcript	ENST00000646743.1	protein_coding	14/15		INFO_REALIGN_3_PRIME	chr8	TogoVar
GRHL2_chr8_101487439_101674726	101652524	G G	GTGTGTGT others(17): Show GTGTGTGTGGTGTGTGTGTGGTGTT	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00738.hp1 HG01069.hp1 others(48): Show HG00639.hp2 HG00738.hp1 HG01069.hp1 HG01074.hp2 HG01167.hp2 HG01261.hp1 HG01346.hp1 HG01515.hp2 HG01516.hp1 HG01517.hp1 HG01517.hp2 HG01928.hp2 HG02071.hp2 HG02074.hp1 HG02602.hp1 HG03098.hp2 HG03471.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03654.hp2 HG03704.hp2 HG03942.hp1 HG03942.hp2 HG04199.hp2 NA18939.hp1 NA18947.hp1 NA18950.hp2 NA18952.hp2 NA18955.hp2 NA18974.hp1 NA18975.hp1 NA18979.hp2 NA18982.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19001.hp1 NA19005.hp2 NA19058.hp2 NA19060.hp1 NA19062.hp2 NA19065.hp1 NA19070.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA19088.hp1 NA20905.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0003 a0001c0001t0006 a0001c0001t0010 others(13): Show a0001c0001t0003 a0001c0001t0006 a0001c0001t0010 a0001c0001t0016 a0001c0001t0021 a0001c0001t0023 a0001c0001t0033 a0001c0001t0034 a0001c0001t0036 a0001c0001t0040 a0001c0001t0041 a0001c0001t0043 a0001c0002t0031 a0001c0002t0063 a0002c0003t0010 a0002c0003t0016	a0001c0001t0003g0046 a0001c0001t0003g0060 a0001c0001t0003g0062 others(48): Show a0001c0001t0003g0046 a0001c0001t0003g0060 a0001c0001t0003g0062 a0001c0001t0003g0064 a0001c0001t0003g0072 a0001c0001t0003g0075 a0001c0001t0003g0079 a0001c0001t0003g0083 a0001c0001t0003g0087 a0001c0001t0003g0142 a0001c0001t0003g0145 a0001c0001t0003g0148 a0001c0001t0003g0153 a0001c0001t0003g0162 a0001c0001t0003g0185 a0001c0001t0003g0193 a0001c0001t0003g0211 a0001c0001t0003g0212 a0001c0001t0003g0225 a0001c0001t0003g0243 a0001c0001t0003g0256 a0001c0001t0003g0264 a0001c0001t0003g0269 a0001c0001t0003g0302 a0001c0001t0006g0001 a0001c0001t0006g0022 a0001c0001t0006g0084 a0001c0001t0006g0129 a0001c0001t0006g0130 a0001c0001t0006g0163 a0001c0001t0006g0222 a0001c0001t0006g0241 a0001c0001t0006g0258 a0001c0001t0006g0293 a0001c0001t0010g0014 a0001c0001t0016g0306 a0001c0001t0021g0013 a0001c0001t0021g0020 a0001c0001t0023g0194 a0001c0001t0023g0195 a0001c0001t0033g0015 a0001c0001t0034g0012 a0001c0001t0036g0008 a0001c0001t0040g0260 a0001c0001t0041g0217 a0001c0001t0043g0187 a0001c0002t0031g0108 a0001c0002t0031g0251 a0001c0002t0063g0099 a0002c0003t0010g0005 a0002c0003t0016g0223	51	306	0.1667	24	c.169 others(43): Show c.1698+3044_1698+3045insGTGTTTGTGTGTGGTGTGTGTGTG	GRHL2	ENSG00000083307.12	transcript	ENST00000646743.1	protein_coding	14/15		INFO_REALIGN_3_PRIME	chr8	TogoVar
GRHL2_chr8_101487439_101674726	101656873	G G	GACACACA others(17): Show GACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02602.hp2 HG02717.hp1 HG02895.hp2 others(1): Show HG02602.hp2 HG02717.hp1 HG02895.hp2 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0007 a0001c0001t0014 a0001c0001t0001 a0001c0001t0007 a0001c0001t0014	a0001c0001t0001g0287 a0001c0001t0007g0111 a0001c0001t0014g0035 others(1): Show a0001c0001t0001g0287 a0001c0001t0007g0111 a0001c0001t0014g0035 a0001c0001t0014g0036	4	306	0.0131	24	c.169 others(43): Show c.1698+7384_1698+7407dupCACACACACACACACACACACACA	GRHL2	ENSG00000083307.12	transcript	ENST00000646743.1	protein_coding	14/15		INFO_REALIGN_3_PRIME	chr8	TogoVar
GRIA1_chr5_153485670_153818869	153566304	C C	CTTTTTTT others(17): Show CTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG01255.hp2 HG01928.hp1 others(16): Show HG01192.hp2 HG01255.hp2 HG01928.hp1 HG01981.hp2 HG01993.hp2 HG02071.hp1 HG02258.hp1 HG02451.hp2 HG02486.hp2 HG03490.hp1 HG03492.hp1 HG03831.hp2 HG04184.hp1 HG04204.hp1 HG04228.hp1 NA18972.hp1 NA19030.hp1 NA19065.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0010 a0001c0001 a0001c0002 a0001c0010	a0001c0001t0001 a0001c0002t0001 a0001c0002t0016 others(1): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0016 a0001c0010t0001	a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0066 others(16): Show a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0066 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0115 a0001c0001t0001g0124 a0001c0001t0001g0160 a0001c0001t0001g0165 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0180 a0001c0002t0001g0141 a0001c0002t0001g0174 a0001c0002t0016g0140 a0001c0010t0001g0184	19	194	0.0979	24	c.220 others(43): Show c.220+72255_220+72256insTTTTTTTTTTTTTTTTTTTTTTTT	GRIA1	ENSG00000155511.19	transcript	ENST00000285900.10	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr5	TogoVar
GRIA1_chr5_153485670_153818869	153607068	T T	TATATATA others(17): Show TATATATATATATATATATATATAA	intron_variant intron_variant	MODIFIER	NA20752.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0112 a0001c0001t0001g0112	1	194	0.0052	24	c.221 others(43): Show c.221-39859_221-39858insTATATATATATATATATATATAAA	GRIA1	ENSG00000155511.19	transcript	ENST00000285900.10	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr5	TogoVar
GRIA1_chr5_153485670_153818869	153701619	C C	CAAAAAAA others(17): Show CAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG01167.hp1 HG03239.hp1 HG00323.hp2 HG01167.hp1 HG03239.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0099 a0001c0001t0001g0121 a0001c0001t0001g0178 a0001c0001t0001g0099 a0001c0001t0001g0121 a0001c0001t0001g0178	3	194	0.0155	24	c.145 others(43): Show c.1452+2569_1452+2570insAAAAAAAAAAAAAAAAAAAAAAAA	GRIA1	ENSG00000155511.19	transcript	ENST00000285900.10	protein_coding	10/15		INFO_REALIGN_3_PRIME	chr5	TogoVar
GRIA2_chr4_157215728_157371075	157230559	T T	TTTCCTTC others(17): Show TTTCCTTCCTTCCTTCTTTCCTTCC	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02280.hp2 HG02630.hp2 others(1): Show HG01884.hp2 HG02280.hp2 HG02630.hp2 HG03209.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0030 a0001c0003t0001g0031 a0001c0003t0001g0032 others(1): Show a0001c0003t0001g0030 a0001c0003t0001g0031 a0001c0003t0001g0032 a0001c0003t0001g0033	4	216	0.0185	24	c.229 others(41): Show c.229+8767_229+8768insTTTCCTTCCTTCCTTCCTTCCTTC	GRIA2	ENSG00000120251.22	transcript	ENST00000264426.14	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr4	TogoVar
GRIA3_chrX_123179278_123495915	123260391	T T	TGAAAGAA others(17): Show TGAAAGAAAGAAAGAAAGAAAGAAA	intron_variant intron_variant	MODIFIER	NA18971.hp1 NA18971.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0039 a0001c0002t0001g0039	1	207	0.0048	24	c.508 others(41): Show c.508+6863_508+6864insAAGAAAGAAAGAAAGAAAGAAAGA	GRIA3	ENSG00000125675.20	transcript	ENST00000620443.2	protein_coding	3/15		INFO_REALIGN_3_PRIME	chrX	TogoVar
GRIA3_chrX_123179278_123495915	123260457	A A	AAAGAAAG others(17): Show AAAGAAAGAAAGAAAGAAAGGAAGG	intron_variant intron_variant	MODIFIER	HG03704.hp1 HG04115.hp1 NA18940.hp1 HG03704.hp1 HG04115.hp1 NA18940.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0002t0017 a0001c0001t0001 a0001c0001t0003 a0001c0002t0017	a0001c0001t0001g0137 a0001c0001t0003g0008 a0001c0002t0017g0098 a0001c0001t0001g0137 a0001c0001t0003g0008 a0001c0002t0017g0098	3	207	0.0145	24	c.508 others(41): Show c.508+6918_508+6919insAAAGAAAGAAAGAAAGGAAGGAAG	GRIA3	ENSG00000125675.20	transcript	ENST00000620443.2	protein_coding	3/15		INFO_REALIGN_3_PRIME	chrX	TogoVar
GRIA3_chrX_123179278_123495915	123260457	A A	AAAGAAAG others(17): Show AAAGAAAGAAAGAAAGGAAGGAAGG	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02055.hp1 HG02683.hp1 others(2): Show HG01109.hp1 HG02055.hp1 HG02683.hp1 HG03579.hp1 NA18990.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0005 a0001c0002t0002 others(1): Show a0001c0001t0001 a0001c0001t0005 a0001c0002t0002 a0001c0002t0006	a0001c0001t0001g0154 a0001c0001t0001g0160 a0001c0001t0005g0041 others(2): Show a0001c0001t0001g0154 a0001c0001t0001g0160 a0001c0001t0005g0041 a0001c0002t0002g0007 a0001c0002t0006g0185	5	207	0.0242	24	c.508 others(41): Show c.508+6918_508+6919insAAAGAAAGAAAGGAAGGAAGGAAG	GRIA3	ENSG00000125675.20	transcript	ENST00000620443.2	protein_coding	3/15		INFO_REALIGN_3_PRIME	chrX	TogoVar
GRIA3_chrX_123179278_123495915	123260457	A A	AAAGAAAG others(17): Show AAAGAAAGAAAGGAAGGAAGGAAGG	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG03017.hp1 HG03471.hp1 others(6): Show HG01081.hp1 HG03017.hp1 HG03471.hp1 HG04199.hp1 NA18945.hp1 NA18960.hp1 NA19068.hp1 NA20129.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0002t0002 others(3): Show a0001c0001t0001 a0001c0001t0003 a0001c0002t0002 a0001c0002t0003 a0001c0002t0005 a0001c0002t0012	a0001c0001t0001g0114 a0001c0001t0001g0178 a0001c0001t0003g0150 others(6): Show a0001c0001t0001g0114 a0001c0001t0001g0178 a0001c0001t0003g0150 a0001c0002t0002g0013 a0001c0002t0002g0071 a0001c0002t0003g0104 a0001c0002t0003g0164 a0001c0002t0005g0005 a0001c0002t0012g0046	9	207	0.0435	24	c.508 others(41): Show c.508+6918_508+6919insAAAGAAAGGAAGGAAGGAAGGAAG	GRIA3	ENSG00000125675.20	transcript	ENST00000620443.2	protein_coding	3/15		INFO_REALIGN_3_PRIME	chrX	TogoVar
GRIA3_chrX_123179278_123495915	123260457	A A	AAAGAAAG others(17): Show AAAGAAAGAGAAGAAGGAAGGAAGG	intron_variant intron_variant	MODIFIER	NA19091.hp1 NA19091.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0028 a0001c0002t0001g0028	1	207	0.0048	24	c.508 others(41): Show c.508+6918_508+6919insAAAGAGAAGAAGGAAGGAAGGAAG	GRIA3	ENSG00000125675.20	transcript	ENST00000620443.2	protein_coding	3/15		INFO_REALIGN_3_PRIME	chrX	TogoVar

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