Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
GRIK2_chr6_101388708_102075083	101975809	G G	GTCTATCT others(17): Show GTCTATCTATCTATCTATCTATCTA	intron_variant intron_variant	MODIFIER	HG02080.hp1 HG02080.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0115 a0001c0001t0005g0115	1	116	0.0086	24	c.208 others(45): Show c.2085+47192_2085+47215dupTATCTATCTATCTATCTATCTATC	GRIK2	ENSG00000164418.22	transcript	ENST00000369134.9	protein_coding	14/16		INFO_REALIGN_3_PRIME	chr6	TogoVar
GRIK2_chr6_101388708_102075083	101975809	G G	GTCTGTCT others(17): Show GTCTGTCTATCTATCTATCTATCTA	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG03209.hp2 NA18522.hp1 HG02976.hp1 HG03209.hp2 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0006 a0001c0001 a0001c0002 a0001c0006	a0001c0001t0002 a0001c0002t0002 a0001c0006t0002 a0001c0001t0002 a0001c0002t0002 a0001c0006t0002	a0001c0001t0002g0014 a0001c0002t0002g0020 a0001c0006t0002g0078 a0001c0001t0002g0014 a0001c0002t0002g0020 a0001c0006t0002g0078	3	116	0.0259	24	c.208 others(45): Show c.2085+47180_2085+47181insGTCTATCTATCTATCTATCTATCT	GRIK2	ENSG00000164418.22	transcript	ENST00000369134.9	protein_coding	14/16		INFO_REALIGN_3_PRIME	chr6	TogoVar
GRIK2_chr6_101388708_102075083	102051251	C C	CCCTTCCT others(17): Show CCCTTCCTTCTTTCCTTCCTTCCTT	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0014 a0001c0002t0014	a0001c0002t0014g0018 a0001c0002t0014g0018	1	116	0.0086	24	c.231 others(43): Show c.2312-4070_2312-4069insTTTCCTTCCTTCCTTCCTTCCTTC	GRIK2	ENSG00000164418.22	transcript	ENST00000369134.9	protein_coding	15/16		INFO_REALIGN_3_PRIME	chr6	TogoVar
GRIK4_chr11_120506748_120993906	120897601	C C	CAAAAAAA others(17): Show CAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA20300.hp2 NA19030.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0002 a0001c0001t0003	a0001c0001t0002g0096 a0001c0001t0003g0017 a0001c0001t0002g0096 a0001c0001t0003g0017	2	128	0.0156	24	c.116 others(41): Show c.1165-928_1165-905dupAAAAAAAAAAAAAAAAAAAAAAAA	GRIK4	ENSG00000149403.13	transcript	ENST00000527524.8	protein_coding	11/20		INFO_REALIGN_3_PRIME	chr11	TogoVar
GRIK4_chr11_120506748_120993906	120957591	A A	ATGTGTGT others(17): Show ATGTGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01934.hp2 HG02559.hp2 HG01934.hp2 HG02559.hp2	a0001 a0004 a0001 a0004	a0001c0002 a0004c0011 a0001c0002 a0004c0011	a0001c0002t0009 a0004c0011t0007 a0001c0002t0009 a0004c0011t0007	a0001c0002t0009g0092 a0004c0011t0007g0124 a0001c0002t0009g0092 a0004c0011t0007g0124	2	128	0.0156	24	c.187 others(41): Show c.1874+650_1874+673dupGTGTGTGTGTGTGTGTGTGTGTGT	GRIK4	ENSG00000149403.13	transcript	ENST00000527524.8	protein_coding	16/20		INFO_REALIGN_3_PRIME	chr11	TogoVar
GRIK4_chr11_120506748_120993906	120957625	G G	GTGTGTGT others(17): Show GTGTGTGTGTGTGTGTGTGTGTGTA	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02135.hp1 NA20129.hp2 HG01109.hp1 HG02135.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0007 a0001c0001 a0001c0002 a0001c0007	a0001c0001t0002 a0001c0002t0012 a0001c0007t0003 a0001c0001t0002 a0001c0002t0012 a0001c0007t0003	a0001c0001t0002g0106 a0001c0002t0012g0001 a0001c0007t0003g0027 a0001c0001t0002g0106 a0001c0002t0012g0001 a0001c0007t0003g0027	3	128	0.0234	24	c.187 others(41): Show c.1874+673_1874+674insGTGTGTGTGTGTGTGTGTGTGTAT	GRIK4	ENSG00000149403.13	transcript	ENST00000527524.8	protein_coding	16/20		INFO_REALIGN_3_PRIME	chr11	TogoVar
GRIN1_chr9_137134154_137173756	137147042	C C	CCCCCACA others(17): Show CCCCCACAGCGCCCGACAGGCCCCT	intron_variant intron_variant	MODIFIER	HG02735.hp1 HG03491.hp2 HG02735.hp1 HG03491.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0252 a0001c0001t0001g0254 a0001c0001t0001g0252 a0001c0001t0001g0254	2	298	0.0067	24	c.570 others(41): Show c.570+1144_570+1145insACAGCGCCCGACAGGCCCCTCCCC	GRIN1	ENSG00000176884.17	transcript	ENST00000371561.8	protein_coding	3/19		INFO_REALIGN_3_PRIME	chr9	TogoVar
GRIN1_chr9_137134154_137173756	137147042	C C	CCCCCCCA others(17): Show CCCCCCCAGCACCCGACAGGCCCCT	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02717.hp2 HG02896.hp1 others(2): Show HG02258.hp2 HG02717.hp2 HG02896.hp1 HG03486.hp1 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0258 others(2): Show a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0258 a0001c0001t0001g0259 a0001c0001t0001g0260	5	298	0.0168	24	c.570 others(41): Show c.570+1142_570+1165dupCCCCCAGCACCCGACAGGCCCCTC	GRIN1	ENSG00000176884.17	transcript	ENST00000371561.8	protein_coding	3/19		INFO_REALIGN_3_PRIME	chr9	TogoVar
GRIN1_chr9_137134154_137173756	137147042	C C	CCCCCCCA others(17): Show CCCCCCCAGCGCCCGACAGGCCCCT	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG00642.hp2 HG01070.hp2 others(20): Show HG00609.hp1 HG00642.hp2 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01106.hp2 HG01192.hp2 HG01255.hp1 HG01516.hp1 HG02015.hp1 HG02135.hp2 HG02486.hp2 HG02602.hp2 HG02818.hp1 HG03834.hp1 HG03834.hp2 HG03942.hp2 NA18522.hp2 NA18939.hp1 NA18942.hp2 NA18985.hp2 NA19058.hp2 NA19087.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0007 a0001c0001 a0001c0003 a0001c0007	a0001c0001t0001 a0001c0003t0001 a0001c0007t0001 a0001c0001t0001 a0001c0003t0001 a0001c0007t0001	a0001c0001t0001g0011 a0001c0001t0001g0095 a0001c0001t0001g0096 others(18): Show a0001c0001t0001g0011 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0101 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0135 a0001c0001t0001g0149 a0001c0001t0001g0213 a0001c0001t0001g0228 a0001c0001t0001g0241 a0001c0001t0001g0263 a0001c0003t0001g0001 a0001c0003t0001g0032 a0001c0003t0001g0137 a0001c0003t0001g0138 a0001c0003t0001g0139 a0001c0003t0001g0240 a0001c0003t0001g0262 a0001c0007t0001g0261	23	298	0.0772	24	c.570 others(41): Show c.570+1149_570+1150insGCCCGACAGGCCCCTCCCCCCAGC	GRIN1	ENSG00000176884.17	transcript	ENST00000371561.8	protein_coding	3/19		INFO_REALIGN_3_PRIME	chr9	TogoVar
GRIN2A_chr16_9748408_10187428	9799964	A A	ATATTATT others(17): Show ATATTATTATTATTATTATTATTAT	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0003 a0001c0009t0003	a0001c0009t0003g0009 a0001c0009t0003g0009	1	168	0.0060	24	c.216 others(43): Show c.2169-1524_2169-1501dupATAATAATAATAATAATAATAATA	GRIN2A	ENSG00000183454.18	transcript	ENST00000330684.4	protein_coding	10/12			chr16	TogoVar
GRIN2A_chr16_9748408_10187428	9799964	A A	ATATTATT others(17): Show ATATTATTGTTATTATTATTATTAT	intron_variant intron_variant	MODIFIER	NA20129.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0022	a0001c0001t0022g0153 a0001c0001t0022g0153	1	168	0.0060	24	c.216 others(43): Show c.2169-1501_2169-1500insATAATAATAATAATAACAATAATA	GRIN2A	ENSG00000183454.18	transcript	ENST00000330684.4	protein_coding	10/12			chr16	TogoVar
GRIN2A_chr16_9748408_10187428	9897221	A A	ATATATGT others(17): Show ATATATGTACATATTTTATATATAT	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0033 a0001c0001t0001g0033	1	168	0.0060	24	c.100 others(43): Show c.1008-6122_1008-6121insATATATATAAAATATGTACATATA	GRIN2A	ENSG00000183454.18	transcript	ENST00000330684.4	protein_coding	3/12			chr16	TogoVar
GRIN2A_chr16_9748408_10187428	9979785	C C	CTATATAT others(17): Show CTATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG01261.hp1 HG01943.hp2 others(3): Show HG01255.hp2 HG01261.hp1 HG01943.hp2 NA18983.hp1 NA19081.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0010 a0001c0001t0013 a0001c0001t0041	a0001c0001t0001g0098 a0001c0001t0002g0038 a0001c0001t0005g0043 others(3): Show a0001c0001t0001g0098 a0001c0001t0002g0038 a0001c0001t0005g0043 a0001c0001t0010g0044 a0001c0001t0013g0080 a0001c0001t0041g0011	6	168	0.0357	24	c.415 others(43): Show c.415-41258_415-41235dupTATATATATATATATATATATATA	GRIN2A	ENSG00000183454.18	transcript	ENST00000330684.4	protein_coding	2/12			chr16	TogoVar
GRIN2A_chr16_9748408_10187428	10084744	C C	CTTTATTT others(17): Show CTTTATTTATTTATTTATTTATTTA	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02145.hp2 HG02602.hp1 others(6): Show HG02055.hp2 HG02145.hp2 HG02602.hp1 HG02615.hp1 HG02809.hp1 HG03041.hp1 HG03486.hp2 HG06807.hp2 NA18961.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0016 a0001c0001t0020 a0001c0002t0006 others(6): Show a0001c0001t0016 a0001c0001t0020 a0001c0002t0006 a0001c0002t0053 a0001c0002t0055 a0001c0002t0064 a0001c0002t0070 a0001c0003t0008 a0001c0003t0009	a0001c0001t0016g0081 a0001c0001t0020g0166 a0001c0002t0006g0013 others(6): Show a0001c0001t0016g0081 a0001c0001t0020g0166 a0001c0002t0006g0013 a0001c0002t0053g0008 a0001c0002t0055g0077 a0001c0002t0064g0014 a0001c0002t0070g0148 a0001c0003t0008g0162 a0001c0003t0009g0149	9	168	0.0536	24	c.414 others(43): Show c.414+95230_414+95253dupTAAATAAATAAATAAATAAATAAA	GRIN2A	ENSG00000183454.18	transcript	ENST00000330684.4	protein_coding	2/12			chr16	TogoVar
GRIN2A_chr16_9748408_10187428	10132340	C C	CAAAAAAA others(17): Show CAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03688.hp1 NA18988.hp2 HG03688.hp1 NA18988.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0027 a0001c0001t0049 a0001c0001t0027 a0001c0001t0049	a0001c0001t0027g0001 a0001c0001t0049g0086 a0001c0001t0027g0001 a0001c0001t0049g0086	2	168	0.0119	24	c.414 others(43): Show c.414+47657_414+47658insTTTTTTTTTTTTTTTTTTTTTTTT	GRIN2A	ENSG00000183454.18	transcript	ENST00000330684.4	protein_coding	2/12			chr16	TogoVar
GRIN2A_chr16_9748408_10187428	10183567	G G	GACACACA others(17): Show GACACACACACACACACACACACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02280.hp1 NA18960.hp2 HG02280.hp1 NA18960.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0017 a0001c0001t0001 a0001c0001t0017	a0001c0001t0001g0031 a0001c0001t0017g0025 a0001c0001t0001g0031 a0001c0001t0017g0025	2	168	0.0119	24	c.-17 others(35): Show c.-1710_-1709insGTGTGTGTGTGTGTGTGTGTGTGT	GRIN2A	ENSG00000183454.18	transcript	ENST00000330684.4	protein_coding		1140		chr16	TogoVar
GRIN2B_chr12_13532337_13986602	13547981	A A	ATATATAT others(17): Show ATATATATATATATTTTTTTTTTTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02135.hp1 HG02135.hp1	a0001 a0001	a0001c0014 a0001c0014	a0001c0014t0106 a0001c0014t0106	a0001c0014t0106g0084 a0001c0014t0106g0084	1	194	0.0052	24	c.14 others(37): Show c.14801_*14802insAAAAAAAAAAAATATATATATATA	GRIN2B	ENSG00000273079.7	transcript	ENST00000609686.4	protein_coding	14/14	14801		chr12	TogoVar
GRIN2B_chr12_13532337_13986602	13547981	A A	ATATATAT others(17): Show ATATATATATATTTTTTTTTTTTTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG04184.hp1 HG04184.hp1	a0001 a0001	a0001c0014 a0001c0014	a0001c0014t0090 a0001c0014t0090	a0001c0014t0090g0022 a0001c0014t0090g0022	1	194	0.0052	24	c.14 others(37): Show c.14801_*14802insAAAAAAAAAAAAAATATATATATA	GRIN2B	ENSG00000273079.7	transcript	ENST00000609686.4	protein_coding	14/14	14801		chr12	TogoVar
GRIN2B_chr12_13532337_13986602	13575673	C C	CAATAATA others(17): Show CAATAATAATAATAATAATAATAAT	intron_variant intron_variant	MODIFIER	HG02897.hp1 HG02897.hp1	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0130 a0001c0009t0130	a0001c0009t0130g0107 a0001c0009t0130g0107	1	194	0.0052	24	c.201 others(43): Show c.2011-3733_2011-3710dupATTATTATTATTATTATTATTATT	GRIN2B	ENSG00000273079.7	transcript	ENST00000609686.4	protein_coding	10/13			chr12	TogoVar
GRIN2B_chr12_13532337_13986602	13605551	T T	TCTCTCTC others(17): Show TCTCTCTCTCTCTCTCTCTCTGACA	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01169.hp1 HG01884.hp1 others(2): Show HG01167.hp1 HG01169.hp1 HG01884.hp1 HG02818.hp1 NA19043.hp2	a0001 a0001	a0001c0003 a0001c0016 a0001c0024 a0001c0003 a0001c0016 a0001c0024	a0001c0003t0002 a0001c0003t0058 a0001c0016t0059 others(1): Show a0001c0003t0002 a0001c0003t0058 a0001c0016t0059 a0001c0024t0002	a0001c0003t0002g0161 a0001c0003t0002g0162 a0001c0003t0058g0082 others(2): Show a0001c0003t0002g0161 a0001c0003t0002g0162 a0001c0003t0058g0082 a0001c0016t0059g0142 a0001c0024t0002g0088	5	194	0.0258	24	c.201 others(43): Show c.2010+3051_2010+3052insTGTCAGAGAGAGAGAGAGAGAGAG	GRIN2B	ENSG00000273079.7	transcript	ENST00000609686.4	protein_coding	10/13			chr12	TogoVar
GRIN2B_chr12_13532337_13986602	13692760	C C	CTTTCTTT others(17): Show CTTTCTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03453.hp1 HG03453.hp1	a0001 a0001	a0001c0011 a0001c0011	a0001c0011t0025 a0001c0011t0025	a0001c0011t0025g0112 a0001c0011t0025g0112	1	194	0.0052	24	c.101 others(45): Show c.1011-16902_1011-16901insAAAAAAAAAAAAAAAAAAAAGAAA	GRIN2B	ENSG00000273079.7	transcript	ENST00000609686.4	protein_coding	4/13			chr12	TogoVar
GRIN2B_chr12_13532337_13986602	13808746	A A	AATATATA others(17): Show AATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19091.hp1 NA19091.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0101 a0001c0004t0101	a0001c0004t0101g0040 a0001c0004t0101g0040	1	194	0.0052	24	c.412 others(43): Show c.412-54832_412-54831insATATATATATATATATATATATAT	GRIN2B	ENSG00000273079.7	transcript	ENST00000609686.4	protein_coding	3/13			chr12	TogoVar
GRIN2B_chr12_13532337_13986602	13927982	A A	AAAAAAAA others(17): Show AAAAAAAAAAAAAAAAAAAAAAAAG	intron_variant intron_variant	MODIFIER	HG03704.hp1 HG03704.hp1	a0001 a0001	a0001c0010 a0001c0010	a0001c0010t0001 a0001c0010t0001	a0001c0010t0001g0009 a0001c0010t0001g0009	1	194	0.0052	24	c.-19 others(43): Show c.-19+51945_-19+51946insCTTTTTTTTTTTTTTTTTTTTTTT	GRIN2B	ENSG00000273079.7	transcript	ENST00000609686.4	protein_coding	2/13			chr12	TogoVar
GRIN2B_chr12_13532337_13986602	13954811	G G	GAAAAAAA others(17): Show GAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0001 a0001	a0001c0015 a0001c0015	a0001c0015t0119 a0001c0015t0119	a0001c0015t0119g0170 a0001c0015t0119g0170	1	194	0.0052	24	c.-19 others(43): Show c.-19+25116_-19+25117insTTTTTTTTTTTTTTTTTTTTTTTT	GRIN2B	ENSG00000273079.7	transcript	ENST00000609686.4	protein_coding	2/13			chr12	TogoVar
GRIN2D_chr19_48388668_48449931	48390577	G G	GAGAGAGA others(17): Show GAGAGAGAGAGAGAGAGAGAGAGAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0305 a0001c0002t0002g0305	1	366	0.0027	24	c.-35 others(35): Show c.-3597_-3596insAGAGAGAGAGAGAGAGAGAGAGAC	GRIN2D	ENSG00000105464.4	transcript	ENST00000263269.4	protein_coding		3090		chr19	TogoVar
GRIN2D_chr19_48388668_48449931	48402115	G G	GGAAAGAA others(17): Show GGAAAGAAAGAAAGAAAGAAAGAAA	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0165 a0001c0002t0002g0165	1	366	0.0027	24	c.466 others(41): Show c.466-2588_466-2565dupAAGAAAGAAAGAAAGAAAGAAAGA	GRIN2D	ENSG00000105464.4	transcript	ENST00000263269.4	protein_coding	3/13		INFO_REALIGN_3_PRIME	chr19	TogoVar
GRIN2D_chr19_48388668_48449931	48426224	C C	CTTTCTTT others(17): Show CTTTCTTTCTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02486.hp2 HG02280.hp2 HG02486.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0089 a0001c0002t0002g0211 a0001c0002t0002g0089 a0001c0002t0002g0211	2	366	0.0055	24	c.225 others(43): Show c.2252+4282_2252+4283insCTTTCTTTTTTTTTTTTTTTTTTT	GRIN2D	ENSG00000105464.4	transcript	ENST00000263269.4	protein_coding	11/13		INFO_REALIGN_3_PRIME	chr19	TogoVar
GRIN3A_chr9_101564352_101743647	101622995	A A	AACACACA others(17): Show AACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02886.hp1 NA19240.hp2 HG02647.hp1 HG02886.hp1 NA19240.hp2	a0003 a0003	a0003c0016 a0003c0016	a0003c0016t0016 a0003c0016t0016	a0003c0016t0016g0028 a0003c0016t0016g0029 a0003c0016t0016g0030 a0003c0016t0016g0028 a0003c0016t0016g0029 a0003c0016t0016g0030	3	324	0.0093	24	c.261 others(41): Show c.2614+299_2614+322dupGTGTGTGTGTGTGTGTGTGTGTGT	GRIN3A	ENSG00000198785.7	transcript	ENST00000361820.6	protein_coding	5/8			chr9	TogoVar
GRIN3A_chr9_101564352_101743647	101658752	G G	GTCTGTCT others(17): Show GTCTGTCTGTCTATCTATCTATCTA	intron_variant intron_variant	MODIFIER	HG00558.hp2 NA18975.hp1 HG00558.hp2 NA18975.hp1	a0001 a0004 a0001 a0004	a0001c0003 a0004c0007 a0001c0003 a0004c0007	a0001c0003t0049 a0004c0007t0042 a0001c0003t0049 a0004c0007t0042	a0001c0003t0049g0259 a0004c0007t0042g0252 a0001c0003t0049g0259 a0004c0007t0042g0252	2	324	0.0062	24	c.235 others(45): Show c.2352+11307_2352+11308insTAGATAGATAGATAGACAGACAGA	GRIN3A	ENSG00000198785.7	transcript	ENST00000361820.6	protein_coding	3/8			chr9	TogoVar
GRIN3A_chr9_101564352_101743647	101658760	G G	GTCTATCT others(17): Show GTCTATCTATCTATCTATCTATCTA	intron_variant intron_variant	MODIFIER	HG03239.hp2 HG03239.hp2	a0004 a0004	a0004c0007 a0004c0007	a0004c0007t0002 a0004c0007t0002	a0004c0007t0002g0021 a0004c0007t0002g0021	1	324	0.0031	24	c.235 others(45): Show c.2352+11299_2352+11300insTAGATAGATAGATAGATAGATAGA	GRIN3A	ENSG00000198785.7	transcript	ENST00000361820.6	protein_coding	3/8			chr9	TogoVar
GRIP1_chr12_66342431_66684076	66363195	G G	GTCTATAT others(17): Show GTCTATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG02083.hp1 HG01081.hp1 HG02083.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0074 a0001c0001t0001g0081 a0001c0001t0001g0074 a0001c0001t0001g0081	2	224	0.0089	24	c.301 others(43): Show c.3012+8498_3012+8499insTATATATATATATATATATATAGA	GRIP1	ENSG00000155974.14	transcript	ENST00000359742.9	protein_coding	23/24			chr12	TogoVar
GRIP1_chr12_66342431_66684076	66608933	A A	AATTATTA others(17): Show AATTATTATTATTATTATTATTATT	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0091 a0001c0001t0001g0091	1	224	0.0045	24	c.56- others(41): Show c.56-12030_56-12007dupAATAATAATAATAATAATAATAAT	GRIP1	ENSG00000155974.14	transcript	ENST00000359742.9	protein_coding	1/24			chr12	TogoVar
GRK2_chr11_67261473_67291556	67274495	C C	CTTTTTTT others(17): Show CTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01123.hp2 NA19005.hp2 HG01069.hp2 HG01123.hp2 NA19005.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0002c0005 a0001c0002 a0002c0005	a0001c0002t0001 a0002c0005t0001 a0001c0002t0001 a0002c0005t0001	a0001c0002t0001g0056 a0001c0002t0001g0092 a0002c0005t0001g0115 a0001c0002t0001g0056 a0001c0002t0001g0092 a0002c0005t0001g0115	3	302	0.0099	24	c.114 others(41): Show c.114-2773_114-2750dupTTTTTTTTTTTTTTTTTTTTTTTT	GRK2	ENSG00000173020.11	transcript	ENST00000308595.10	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr11	TogoVar
GRK4_chr4_2958571_3045760	2988075	C C	CAAAAAAA others(17): Show CAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01243.hp2 HG01361.hp2 others(10): Show HG00639.hp2 HG01243.hp2 HG01361.hp2 HG01891.hp1 HG02559.hp2 HG02647.hp2 HG02895.hp2 HG03579.hp1 NA18950.hp2 NA18957.hp1 NA19000.hp2 NA20905.hp1 NA21309.hp2	a0003 a0005 a0006 others(2): Show a0003 a0005 a0006 a0008 a0011	a0003c0003 a0005c0005 a0006c0006 others(2): Show a0003c0003 a0005c0005 a0006c0006 a0008c0008 a0011c0016	a0003c0003t0002 a0005c0005t0002 a0006c0006t0002 others(2): Show a0003c0003t0002 a0005c0005t0002 a0006c0006t0002 a0008c0008t0004 a0011c0016t0002	a0003c0003t0002g0038 a0003c0003t0002g0039 a0003c0003t0002g0186 others(10): Show a0003c0003t0002g0038 a0003c0003t0002g0039 a0003c0003t0002g0186 a0003c0003t0002g0187 a0003c0003t0002g0254 a0005c0005t0002g0027 a0005c0005t0002g0032 a0005c0005t0002g0199 a0006c0006t0002g0174 a0006c0006t0002g0175 a0006c0006t0002g0177 a0008c0008t0004g0008 a0011c0016t0002g0178	13	268	0.0485	24	c.149 others(39): Show c.149-651_149-628dupAAAAAAAAAAAAAAAAAAAAAAAA	GRK4	ENSG00000125388.20	transcript	ENST00000398052.9	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr4	TogoVar
GRK4_chr4_2958571_3045760	3001089	A A	ATATATAT others(17): Show ATATATATATATATATATATGTGTG	intron_variant intron_variant	MODIFIER	HG03516.hp2 NA18906.hp1 HG03516.hp2 NA18906.hp1	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0002 a0005c0005t0002	a0005c0005t0002g0012 a0005c0005t0002g0013 a0005c0005t0002g0012 a0005c0005t0002g0013	2	268	0.0075	24	c.340 others(41): Show c.340-3141_340-3140insATATATATATATATATATGTGTGT	GRK4	ENSG00000125388.20	transcript	ENST00000398052.9	protein_coding	4/15		INFO_REALIGN_3_PRIME	chr4	TogoVar
GRK5_chr10_119202571_119464745	119291932	T T	TTTCCTCC others(17): Show TTTCCTCCTCTTTTTCCTCCTTCTC	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00597.hp1 HG00639.hp1 others(47): Show HG00140.hp1 HG00597.hp1 HG00639.hp1 HG00733.hp2 HG01074.hp2 HG01168.hp2 HG01243.hp1 HG01516.hp1 HG01516.hp2 HG01884.hp2 HG01978.hp1 HG02040.hp1 HG02056.hp1 HG02109.hp1 HG02109.hp2 HG02132.hp1 HG02145.hp1 HG02155.hp2 HG02165.hp1 HG02300.hp2 HG02559.hp2 HG02572.hp2 HG02615.hp2 HG02630.hp1 HG02647.hp1 HG02698.hp1 HG02976.hp1 HG03041.hp1 HG03041.hp2 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03579.hp2 HG04115.hp2 HG04199.hp1 HG04228.hp1 NA18522.hp1 NA18906.hp1 NA18906.hp2 NA18944.hp1 NA18944.hp2 NA18960.hp1 NA18960.hp2 NA18985.hp1 NA19030.hp1 NA19070.hp2 NA19082.hp1 NA19090.hp2 NA20300.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0005	a0001c0001 a0001c0004 a0001c0010 others(4): Show a0001c0001 a0001c0004 a0001c0010 a0002c0003 a0002c0005 a0003c0002 a0005c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(33): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0012 a0001c0001t0013 a0001c0001t0019 a0001c0001t0023 a0001c0001t0026 a0001c0001t0052 a0001c0001t0063 a0001c0001t0071 a0001c0001t0072 a0001c0001t0077 a0001c0001t0084 a0001c0004t0001 a0001c0004t0007 a0001c0004t0016 a0001c0004t0040 a0001c0010t0002 a0002c0003t0020 a0002c0003t0027 a0002c0003t0070 a0002c0003t0078 a0002c0003t0080 a0002c0005t0007 a0003c0002t0003 a0003c0002t0031 a0003c0002t0054 a0003c0002t0056 a0003c0002t0057 a0003c0002t0060 a0003c0002t0079 a0005c0007t0004	a0001c0001t0001g0031 a0001c0001t0001g0086 a0001c0001t0001g0123 others(47): Show a0001c0001t0001g0031 a0001c0001t0001g0086 a0001c0001t0001g0123 a0001c0001t0001g0171 a0001c0001t0001g0194 a0001c0001t0002g0012 a0001c0001t0002g0088 a0001c0001t0002g0106 a0001c0001t0005g0007 a0001c0001t0006g0085 a0001c0001t0006g0092 a0001c0001t0006g0155 a0001c0001t0007g0165 a0001c0001t0008g0064 a0001c0001t0012g0030 a0001c0001t0013g0186 a0001c0001t0019g0127 a0001c0001t0023g0098 a0001c0001t0023g0118 a0001c0001t0026g0114 a0001c0001t0052g0066 a0001c0001t0063g0013 a0001c0001t0071g0145 a0001c0001t0072g0140 a0001c0001t0077g0164 a0001c0001t0084g0192 a0001c0004t0001g0107 a0001c0004t0007g0147 a0001c0004t0016g0062 a0001c0004t0040g0071 a0001c0010t0002g0047 a0002c0003t0020g0133 a0002c0003t0027g0170 a0002c0003t0070g0152 a0002c0003t0078g0153 a0002c0003t0080g0015 a0002c0005t0007g0143 a0003c0002t0003g0002 a0003c0002t0003g0011 a0003c0002t0003g0050 a0003c0002t0003g0083 a0003c0002t0003g0172 a0003c0002t0003g0198 a0003c0002t0031g0003 a0003c0002t0054g0048 a0003c0002t0056g0087 a0003c0002t0057g0090 a0003c0002t0060g0173 a0003c0002t0079g0157 a0005c0007t0004g0026	50	202	0.2475	24	c.53- others(41): Show c.53-34583_53-34560dupTTCCTCCTCTTTTTCCTCCTTCTC	GRK5	ENSG00000198873.12	transcript	ENST00000392870.3	protein_coding	1/15		INFO_REALIGN_3_PRIME	chr10	TogoVar
GRK5_chr10_119202571_119464745	119335129	C C	CCTCTCTC others(17): Show CCTCTCTCTCTCTCTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG03041.hp2 HG02818.hp2 HG03041.hp2	a0002 a0004 a0002 a0004	a0002c0003 a0004c0006 a0002c0003 a0004c0006	a0002c0003t0027 a0004c0006t0014 a0002c0003t0027 a0004c0006t0014	a0002c0003t0027g0170 a0004c0006t0014g0069 a0002c0003t0027g0170 a0004c0006t0014g0069	2	202	0.0099	24	c.148 others(41): Show c.148+8542_148+8565dupTCTCTCTCTCTCTCTCTCTCTCTC	GRK5	ENSG00000198873.12	transcript	ENST00000392870.3	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr10	TogoVar
GRK5_chr10_119202571_119464745	119344872	C C	CCCTTCCT others(17): Show CCCTTCCTTCCTTCCTTCCTTCCTT	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG01168.hp1 HG01169.hp1 others(9): Show HG00140.hp2 HG01168.hp1 HG01169.hp1 HG01496.hp1 HG02818.hp2 HG03017.hp2 HG03710.hp2 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG06807.hp2 NA19070.hp1	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0003c0002 a0004c0006 a0001c0001 a0003c0002 a0004c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0017 a0001c0001t0019 a0001c0001t0020 a0001c0001t0045 a0003c0002t0003 a0003c0002t0055 a0003c0002t0060 a0004c0006t0014	a0001c0001t0001g0018 a0001c0001t0001g0182 a0001c0001t0002g0183 others(9): Show a0001c0001t0001g0018 a0001c0001t0001g0182 a0001c0001t0002g0183 a0001c0001t0006g0169 a0001c0001t0017g0072 a0001c0001t0019g0177 a0001c0001t0020g0044 a0001c0001t0045g0180 a0003c0002t0003g0116 a0003c0002t0055g0174 a0003c0002t0060g0173 a0004c0006t0014g0069	12	202	0.0594	24	c.148 others(43): Show c.148+18302_148+18325dupCCTTCCTTCCTTCCTTCCTTCCTT	GRK5	ENSG00000198873.12	transcript	ENST00000392870.3	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr10	TogoVar
GRK7_chr3_141758408_141824352	141777322	C C	CTTTTTTT others(17): Show CTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0153 a0001c0001t0001g0153	1	358	0.0028	24	c.-11 others(41): Show c.-113-830_-113-829insTTTTTTTTTTTTTTTTTTTTTTTT	GRK7	ENSG00000114124.3	transcript	ENST00000682958.1	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRM1_chr6_146024062_146442601	146043782	G G	GATATATA others(17): Show GATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01884.hp2 NA20805.hp1 HG01884.hp2 NA20805.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0016 a0001c0003t0002 a0001c0003t0016	a0001c0003t0002g0121 a0001c0003t0016g0126 a0001c0003t0002g0121 a0001c0003t0016g0126	2	158	0.0127	24	c.700 others(43): Show c.700+13571_700+13594dupTATATATATATATATATATATATA	GRM1	ENSG00000152822.15	transcript	ENST00000282753.6	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr6	TogoVar
GRM1_chr6_146024062_146442601	146140090	A A	ATTCTTTC others(17): Show ATTCTTTCTTTCTTTCTTTCTTTCT	intron_variant intron_variant	MODIFIER	NA18612.hp2 NA18991.hp1 NA18612.hp2 NA18991.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0003 a0001c0001t0001 a0002c0002t0003	a0001c0001t0001g0078 a0002c0002t0003g0032 a0001c0001t0001g0078 a0002c0002t0003g0032	2	158	0.0127	24	c.701 others(43): Show c.701-19230_701-19207dupTTTCTTTCTTTCTTTCTTTCTTTC	GRM1	ENSG00000152822.15	transcript	ENST00000282753.6	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr6	TogoVar
GRM1_chr6_146024062_146442601	146140138	T T	TTTCTTTC others(17): Show TTTCTTTCTTTCTTTCTTTCTTTCC	intron_variant intron_variant	MODIFIER	NA19079.hp2 NA19079.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0066 a0002c0002t0003g0066	1	158	0.0063	24	c.701 others(43): Show c.701-19207_701-19206insTTTCTTTCTTTCTTTCTTTCCTTC	GRM1	ENSG00000152822.15	transcript	ENST00000282753.6	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr6	TogoVar
GRM1_chr6_146024062_146442601	146146103	C C	CTTTTTTT others(17): Show CTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG04204.hp2 HG04204.hp2	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0004 a0002c0005t0004	a0002c0005t0004g0129 a0002c0005t0004g0129	1	158	0.0063	24	c.701 others(43): Show c.701-13232_701-13209dupTTTTTTTTTTTTTTTTTTTTTTTT	GRM1	ENSG00000152822.15	transcript	ENST00000282753.6	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr6	TogoVar
GRM1_chr6_146024062_146442601	146159641	T T	TCTCTCTC others(17): Show TCTCTCTCTCTCTCTCTCACACACA	intron_variant intron_variant	MODIFIER	NA18991.hp1 NA19072.hp1 NA18991.hp1 NA19072.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0077 a0001c0001t0001g0078	2	158	0.0127	24	c.950 others(37): Show c.950+45_950+46insTCTCTCTCTCTCTCTCACACACAC	GRM1	ENSG00000152822.15	transcript	ENST00000282753.6	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr6	TogoVar
GRM1_chr6_146024062_146442601	146270912	T T	TCTTTCTT others(17): Show TCTTTCTTTCTTCCTTCCTTCCTTC	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG02818.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0001 a0001c0006t0001	a0001c0006t0001g0022 a0001c0006t0001g0022	1	158	0.0063	24	c.951 others(43): Show c.951-33696_951-33695insTCTTTCTTCCTTCCTTCCTTCCTT	GRM1	ENSG00000152822.15	transcript	ENST00000282753.6	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr6	TogoVar
GRM1_chr6_146024062_146442601	146396090	A A	ATCTATCT others(17): Show ATCTATCTATCTATCTATCTATCTG	intron_variant intron_variant	MODIFIER	HG03453.hp1 HG03453.hp1	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0021 a0002c0005t0021	a0002c0005t0021g0098 a0002c0005t0021g0098	1	158	0.0063	24	c.173 others(43): Show c.1730-2665_1730-2664insTATCTATCTGTCTATCTATCTATC	GRM1	ENSG00000152822.15	transcript	ENST00000282753.6	protein_coding	6/7		INFO_REALIGN_3_PRIME	chr6	TogoVar
GRM1_chr6_146024062_146442601	146414377	T T	TTTATTAT others(17): Show TTTATTATTATTATTATTATTATTA	intron_variant intron_variant	MODIFIER	HG03453.hp1 HG03453.hp1	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0021 a0002c0005t0021	a0002c0005t0021g0098 a0002c0005t0021g0098	1	158	0.0063	24	c.266 others(45): Show c.2660+14684_2660+14707dupATTATTATTATTATTATTATTATT	GRM1	ENSG00000152822.15	transcript	ENST00000282753.6	protein_coding	7/7		INFO_REALIGN_3_PRIME	chr6	TogoVar
GRM1_chr6_146024062_146442601	146442090	A A	AAAGGAAG others(17): Show AAAGGAAGGGAAGGGAAGGGAAGGG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02630.hp2 HG03139.hp1 HG02630.hp2 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0024 a0001c0001t0001g0029 a0001c0001t0001g0024 a0001c0001t0001g0029	2	158	0.0127	24	c.72 others(35): Show c.7294_*7295insAAGGAAGGGAAGGGAAGGGAAGGG	GRM1	ENSG00000152822.15	transcript	ENST00000282753.6	protein_coding		4490		chr6	TogoVar
GRM3_chr7_86638909_86869879	86785685	A A	ATTTTTTT others(17): Show ATTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19001.hp1 NA19001.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0009 a0001c0001t0003g0009	1	216	0.0046	24	c.469 others(39): Show c.469-566_469-543dupTTTTTTTTTTTTTTTTTTTTTTTT	GRM3	ENSG00000198822.11	transcript	ENST00000361669.7	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr7	TogoVar
GRM4_chr6_34013643_34151087	34067366	T T	TTCGCTCC others(17): Show TTCGCTCCCTCCCTCCGTCCTTCCC	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0028 a0001c0002t0028	a0001c0002t0028g0169 a0001c0002t0028g0169	1	282	0.0036	24	c.737 others(41): Show c.737-5362_737-5339dupGGGAAGGACGGAGGGAGGGAGCGA	GRM4	ENSG00000124493.14	transcript	ENST00000538487.7	protein_coding	3/10			chr6	TogoVar

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