Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
JAK1_chr1_64828229_64971549	64902583	A A	AGAGAGAG others(17): Show AGAGAGAGAGAGAGAGAGAGAGTGT	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG02258.hp1 HG02630.hp1 others(7): Show HG01106.hp1 HG02258.hp1 HG02630.hp1 HG02818.hp2 HG02897.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp2 NA19084.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0006 a0001c0007 a0001c0001 a0001c0006 a0001c0007	a0001c0001t0001 a0001c0001t0002 a0001c0006t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0006t0003 a0001c0007t0001	a0001c0001t0001g0212 a0001c0001t0001g0223 a0001c0001t0001g0269 others(7): Show a0001c0001t0001g0212 a0001c0001t0001g0223 a0001c0001t0001g0269 a0001c0001t0002g0103 a0001c0001t0002g0191 a0001c0001t0002g0192 a0001c0001t0002g0218 a0001c0001t0002g0314 a0001c0006t0003g0164 a0001c0007t0001g0009	10	326	0.0307	24	c.-77 others(43): Show c.-77-16243_-77-16242insACACTCTCTCTCTCTCTCTCTCTC	JAK1	ENSG00000162434.14	transcript	ENST00000342505.5	protein_coding	1/24			chr1	TogoVar
JAK1_chr1_64828229_64971549	64902583	A A	AGAGAGAG others(17): Show AGAGAGAGAGAGAGAGAGAGTGTGT	intron_variant intron_variant	MODIFIER	NA20129.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0211 a0001c0001t0001g0211	1	326	0.0031	24	c.-77 others(43): Show c.-77-16243_-77-16242insACACACTCTCTCTCTCTCTCTCTC	JAK1	ENSG00000162434.14	transcript	ENST00000342505.5	protein_coding	1/24			chr1	TogoVar
JAK1_chr1_64828229_64971549	64902583	A A	AGAGAGAG others(17): Show AGAGAGAGAGAGAGAGAGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG01433.hp1 HG03239.hp1 HG00642.hp1 HG01433.hp1 HG03239.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0001	a0001c0005t0001g0115 a0001c0005t0001g0116 a0001c0005t0001g0268 a0001c0005t0001g0115 a0001c0005t0001g0116 a0001c0005t0001g0268	3	326	0.0092	24	c.-77 others(43): Show c.-77-16243_-77-16242insACACACACTCTCTCTCTCTCTCTC	JAK1	ENSG00000162434.14	transcript	ENST00000342505.5	protein_coding	1/24			chr1	TogoVar
JAK1_chr1_64828229_64971549	64902583	A A	AGAGAGAG others(17): Show AGAGAGAGAGAGAGAGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0001	a0001c0005t0001g0296 a0001c0005t0001g0296	1	326	0.0031	24	c.-77 others(43): Show c.-77-16243_-77-16242insACACACACACTCTCTCTCTCTCTC	JAK1	ENSG00000162434.14	transcript	ENST00000342505.5	protein_coding	1/24			chr1	TogoVar
JAK1_chr1_64828229_64971549	64913641	G G	GAGGAAGG others(17): Show GAGGAAGGAAGGAAGGAAAGAAGGA	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00741.hp2 HG01261.hp2 others(15): Show HG00642.hp2 HG00741.hp2 HG01261.hp2 HG01993.hp1 HG02145.hp1 HG02145.hp2 HG02257.hp1 HG02572.hp2 HG03471.hp1 HG03486.hp1 NA18942.hp2 NA18947.hp2 NA18953.hp2 NA18965.hp1 NA18972.hp1 NA19077.hp2 NA19078.hp1 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0004 a0001c0002t0001 a0001c0003t0001 a0001c0001t0004 a0001c0002t0001 a0001c0003t0001	a0001c0001t0004g0003 a0001c0001t0004g0004 a0001c0001t0004g0005 others(15): Show a0001c0001t0004g0003 a0001c0001t0004g0004 a0001c0001t0004g0005 a0001c0001t0004g0007 a0001c0002t0001g0226 a0001c0003t0001g0021 a0001c0003t0001g0023 a0001c0003t0001g0032 a0001c0003t0001g0033 a0001c0003t0001g0034 a0001c0003t0001g0037 a0001c0003t0001g0235 a0001c0003t0001g0236 a0001c0003t0001g0243 a0001c0003t0001g0248 a0001c0003t0001g0250 a0001c0003t0001g0308 a0001c0003t0001g0309	18	326	0.0552	24	c.-77 others(43): Show c.-77-27301_-77-27300insTCCTTCTTTCCTTCCTTCCTTCCT	JAK1	ENSG00000162434.14	transcript	ENST00000342505.5	protein_coding	1/24			chr1	TogoVar
JAK1_chr1_64828229_64971549	64913655	A A	AGAAGGAA others(17): Show AGAAGGAAGGAAGGAAGGAAAGAAG	intron_variant intron_variant	MODIFIER	HG03704.hp1 HG03704.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0072 a0001c0003t0001g0072	1	326	0.0031	24	c.-77 others(43): Show c.-77-27315_-77-27314insCTTCTTTCCTTCCTTCCTTCCTTC	JAK1	ENSG00000162434.14	transcript	ENST00000342505.5	protein_coding	1/24			chr1	TogoVar
JAK1_chr1_64828229_64971549	64913705	A A	AAGGAAGG others(17): Show AAGGAAGGAAGGAAAGAAGGGAGGG	intron_variant intron_variant	MODIFIER	HG04184.hp2 HG04184.hp2	a0000 a0000	a0000c0011 a0000c0011	a0000c0011t0010 a0000c0011t0010	a0000c0011t0010g0025 a0000c0011t0010g0025	1	326	0.0031	24	c.-77 others(43): Show c.-77-27365_-77-27364insCCCTCCCTTCTTTCCTTCCTTCCT	JAK1	ENSG00000162434.14	transcript	ENST00000342505.5	protein_coding	1/24			chr1	TogoVar
JAK1_chr1_64828229_64971549	64913705	A A	AAGGAAGG others(17): Show AAGGAAGGAAGGAAGGAAAGAAGGG	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00558.hp1 HG00597.hp1 others(12): Show HG00280.hp1 HG00558.hp1 HG00597.hp1 HG01109.hp1 HG02040.hp2 HG02735.hp2 HG03017.hp2 HG03239.hp2 HG04204.hp2 NA18612.hp1 NA18979.hp1 NA19002.hp1 NA19066.hp1 NA20300.hp2 NA20752.hp2	a0001 a0001	a0001c0002 a0001c0004 a0001c0005 a0001c0002 a0001c0004 a0001c0005	a0001c0002t0001 a0001c0002t0002 a0001c0004t0002 others(1): Show a0001c0002t0001 a0001c0002t0002 a0001c0004t0002 a0001c0005t0002	a0001c0002t0001g0045 a0001c0002t0002g0028 a0001c0002t0002g0031 others(12): Show a0001c0002t0001g0045 a0001c0002t0002g0028 a0001c0002t0002g0031 a0001c0002t0002g0051 a0001c0002t0002g0067 a0001c0002t0002g0070 a0001c0002t0002g0073 a0001c0002t0002g0089 a0001c0002t0002g0118 a0001c0002t0002g0147 a0001c0002t0002g0276 a0001c0002t0002g0301 a0001c0004t0002g0066 a0001c0004t0002g0071 a0001c0005t0002g0122	15	326	0.0460	24	c.-77 others(43): Show c.-77-27365_-77-27364insCCCTTCTTTCCTTCCTTCCTTCCT	JAK1	ENSG00000162434.14	transcript	ENST00000342505.5	protein_coding	1/24			chr1	TogoVar
JAK1_chr1_64828229_64971549	64913705	A A	AAGGAAGG others(17): Show AAGGAAGGAAGGAAGGAAGGAAGGG	intron_variant intron_variant	MODIFIER	NA19087.hp2 NA19087.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0012 a0001c0002t0012	a0001c0002t0012g0044 a0001c0002t0012g0044	1	326	0.0031	24	c.-77 others(43): Show c.-77-27365_-77-27364insCCCTTCCTTCCTTCCTTCCTTCCT	JAK1	ENSG00000162434.14	transcript	ENST00000342505.5	protein_coding	1/24			chr1	TogoVar
JAK1_chr1_64828229_64971549	64913705	A A	AGGGAAGG others(17): Show AGGGAAGGAAGGAAGGAAAGAAGGG	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG03471.hp2 HG02559.hp1 HG03471.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0001	a0001c0005t0001g0295 a0001c0005t0001g0296 a0001c0005t0001g0295 a0001c0005t0001g0296	2	326	0.0061	24	c.-77 others(43): Show c.-77-27365_-77-27364insCCCTTCTTTCCTTCCTTCCTTCCC	JAK1	ENSG00000162434.14	transcript	ENST00000342505.5	protein_coding	1/24			chr1	TogoVar
JAK1_chr1_64828229_64971549	64913707	G G	GGAAGGAA others(17): Show GGAAGGAAGGAAGGAAGGAAGGAAA	intron_variant intron_variant	MODIFIER	HG01255.hp1 NA20752.hp1 HG01255.hp1 NA20752.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0315 a0001c0003t0001g0316 a0001c0003t0001g0315 a0001c0003t0001g0316	2	326	0.0061	24	c.-77 others(43): Show c.-77-27367_-77-27366insTTTCCTTCCTTCCTTCCTTCCTTC	JAK1	ENSG00000162434.14	transcript	ENST00000342505.5	protein_coding	1/24			chr1	TogoVar
JAK2_chr9_4980272_5134948	5062500	T T	TAAAAAAA others(17): Show TAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0011 a0001c0003t0011	a0001c0003t0011g0062 a0001c0003t0011g0062	1	364	0.0028	24	c.105 others(43): Show c.1057-2375_1057-2352dupAAAAAAAAAAAAAAAAAAAAAAAA	JAK2	ENSG00000096968.14	transcript	ENST00000381652.4	protein_coding	8/24		INFO_REALIGN_3_PRIME	chr9	TogoVar
JAK2_chr9_4980272_5134948	5131435	A A	ATTTTTTT others(17): Show ATTTTTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00741.hp2 HG02258.hp1 HG02559.hp2 others(2): Show HG00741.hp2 HG02258.hp1 HG02559.hp2 HG03195.hp2 HG03471.hp1	a0001 a0001	a0001c0003 a0001c0004 a0001c0003 a0001c0004	a0001c0003t0013 a0001c0003t0056 a0001c0004t0006 others(2): Show a0001c0003t0013 a0001c0003t0056 a0001c0004t0006 a0001c0004t0031 a0001c0004t0053	a0001c0003t0013g0029 a0001c0003t0056g0027 a0001c0004t0006g0038 others(2): Show a0001c0003t0013g0029 a0001c0003t0056g0027 a0001c0004t0006g0038 a0001c0004t0031g0042 a0001c0004t0053g0047	5	364	0.0137	24	c.46 others(35): Show c.4644_*4645insTTTTTTTTTTTTTTTTTTTTTTTT	JAK2	ENSG00000096968.14	transcript	ENST00000381652.4	protein_coding		1488		chr9	TogoVar
JAKMIP1_chr4_6021199_6205549	6080984	T T	TACACACA others(17): Show TACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02922.hp2 NA20752.hp1 HG02922.hp2 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0114 a0001c0001t0001g0189 a0001c0001t0001g0114 a0001c0001t0001g0189	2	233	0.0086	24	c.110 others(41): Show c.1101+601_1101+624dupGTGTGTGTGTGTGTGTGTGTGTGT	JAKMIP1	ENSG00000152969.21	transcript	ENST00000409021.9	protein_coding	6/20			chr4	TogoVar
JAKMIP1_chr4_6021199_6205549	6098546	A A	AAAAGAAA others(17): Show AAAAGAAAGAAAGAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG03540.hp2 NA19240.hp1 HG02257.hp1 HG03540.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0183 a0001c0001t0001g0201 a0001c0001t0001g0205 a0001c0001t0001g0183 a0001c0001t0001g0201 a0001c0001t0001g0205	3	233	0.0129	24	c.624 others(41): Show c.624+6903_624+6926dupCTTTCTTTCTTTCTTTCTTTCTTT	JAKMIP1	ENSG00000152969.21	transcript	ENST00000409021.9	protein_coding	3/20			chr4	TogoVar
JAKMIP1_chr4_6021199_6205549	6152789	A A	AATATATA others(17): Show AATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0213 a0001c0001t0001g0213	1	233	0.0043	24	c.-14 others(45): Show c.-147-39793_-147-39792insATATATATATATATATATATATAT	JAKMIP1	ENSG00000152969.21	transcript	ENST00000409021.9	protein_coding	1/20			chr4	TogoVar
JAKMIP1_chr4_6021199_6205549	6183478	C C	CAATAAAT others(17): Show CAATAAATAAATAAATAAATAAATA	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00558.hp1 HG01255.hp1 others(30): Show HG00280.hp2 HG00558.hp1 HG01255.hp1 HG01261.hp1 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01993.hp1 HG02055.hp2 HG02071.hp1 HG02293.hp1 HG02293.hp2 HG02717.hp1 HG03927.hp1 HG03942.hp2 HG04199.hp1 HG04204.hp2 HG06807.hp1 NA18747.hp1 NA18747.hp2 NA18941.hp2 NA18942.hp2 NA18949.hp1 NA18964.hp1 NA18974.hp2 NA18975.hp1 NA18998.hp2 NA19012.hp1 NA19043.hp2 NA19066.hp1 NA19083.hp2 NA20129.hp1 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0011 a0001c0001 a0001c0005 a0001c0011	a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 others(2): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 a0001c0005t0001 a0001c0011t0001	a0001c0001t0001g0004 a0001c0001t0001g0028 a0001c0001t0001g0039 others(30): Show a0001c0001t0001g0004 a0001c0001t0001g0028 a0001c0001t0001g0039 a0001c0001t0001g0053 a0001c0001t0001g0059 a0001c0001t0001g0070 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0086 a0001c0001t0001g0094 a0001c0001t0001g0104 a0001c0001t0001g0115 a0001c0001t0001g0119 a0001c0001t0001g0127 a0001c0001t0001g0134 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0159 a0001c0001t0001g0163 a0001c0001t0001g0168 a0001c0001t0001g0180 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0199 a0001c0001t0005g0002 a0001c0001t0006g0167 a0001c0005t0001g0169 a0001c0011t0001g0140	33	233	0.1416	24	c.-14 others(45): Show c.-148+16751_-148+16774dupTATTTATTTATTTATTTATTTATT	JAKMIP1	ENSG00000152969.21	transcript	ENST00000409021.9	protein_coding	1/20			chr4	TogoVar
JAKMIP1_chr4_6021199_6205549	6183506	A A	AAATAAAT others(17): Show AAATAAATAAATAAATAAATAAATT	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0177 a0001c0001t0001g0177	1	233	0.0043	24	c.-14 others(45): Show c.-148+16746_-148+16747insAATTTATTTATTTATTTATTTATT	JAKMIP1	ENSG00000152969.21	transcript	ENST00000409021.9	protein_coding	1/20			chr4	TogoVar
JAKMIP1_chr4_6021199_6205549	6191913	T T	TTTTATTT others(17): Show TTTTATTTATTTATTTATTTATTTA	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG02970.hp1 NA18966.hp2 others(1): Show HG01167.hp2 HG02970.hp1 NA18966.hp2 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0037 a0001c0001t0001g0073 a0001c0001t0001g0092 others(1): Show a0001c0001t0001g0037 a0001c0001t0001g0073 a0001c0001t0001g0092 a0001c0001t0002g0227	4	233	0.0172	24	c.-14 others(43): Show c.-148+8316_-148+8339dupTAAATAAATAAATAAATAAATAAA	JAKMIP1	ENSG00000152969.21	transcript	ENST00000409021.9	protein_coding	1/20			chr4	TogoVar
JAKMIP2_chr5_147580438_147787728	147702463	A A	AAGGAAGG others(17): Show AAGGAAGGAAGGAAGGAAGGAAGGG	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0005 a0001c0002t0001g0005	1	250	0.0040	24	c.-14 others(45): Show c.-148-30510_-148-30509insCCCTTCCTTCCTTCCTTCCTTCCT	JAKMIP2	ENSG00000176049.16	transcript	ENST00000616793.5	protein_coding	1/21			chr5	TogoVar
JAKMIP3_chr10_132060946_132189858	132108976	T T	TACGCAAA others(17): Show TACGCAAATGTATATATACATATAC	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00544.hp1 HG00642.hp2 others(35): Show HG00423.hp1 HG00544.hp1 HG00642.hp2 HG01069.hp2 HG01243.hp1 HG01256.hp2 HG02015.hp2 HG02040.hp1 HG02040.hp2 HG02132.hp2 HG02135.hp2 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02615.hp1 HG02630.hp2 HG02895.hp2 HG02897.hp1 HG02922.hp2 HG02965.hp1 HG03041.hp2 HG03098.hp2 HG03130.hp2 HG03225.hp1 HG03471.hp2 HG03491.hp1 HG03927.hp1 HG06807.hp2 NA18944.hp1 NA18952.hp1 NA18954.hp2 NA18966.hp1 NA18971.hp2 NA18983.hp2 NA19004.hp1 NA19081.hp2 NA19088.hp1 NA19091.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0006 a0001c0019 a0001c0022 others(11): Show a0001c0006 a0001c0019 a0001c0022 a0001c0032 a0002c0010 a0002c0023 a0003c0003 a0003c0020 a0004c0007 a0004c0009 a0004c0014 a0004c0027 a0004c0028 a0004c0030	a0001c0006t0003 a0001c0006t0025 a0001c0006t0035 others(22): Show a0001c0006t0003 a0001c0006t0025 a0001c0006t0035 a0001c0019t0001 a0001c0019t0003 a0001c0019t0015 a0001c0022t0002 a0001c0032t0037 a0002c0010t0002 a0002c0023t0001 a0002c0023t0003 a0003c0003t0001 a0003c0003t0002 a0003c0003t0005 a0003c0003t0012 a0003c0020t0003 a0004c0007t0012 a0004c0009t0002 a0004c0009t0010 a0004c0014t0001 a0004c0014t0013 a0004c0014t0031 a0004c0027t0001 a0004c0028t0002 a0004c0030t0030	a0001c0006t0003g0082 a0001c0006t0003g0083 a0001c0006t0003g0149 others(35): Show a0001c0006t0003g0082 a0001c0006t0003g0083 a0001c0006t0003g0149 a0001c0006t0025g0153 a0001c0006t0035g0057 a0001c0019t0001g0152 a0001c0019t0003g0081 a0001c0019t0015g0085 a0001c0022t0002g0062 a0001c0032t0037g0124 a0002c0010t0002g0157 a0002c0010t0002g0158 a0002c0023t0001g0058 a0002c0023t0003g0073 a0003c0003t0001g0064 a0003c0003t0001g0071 a0003c0003t0001g0076 a0003c0003t0001g0077 a0003c0003t0001g0131 a0003c0003t0002g0056 a0003c0003t0005g0072 a0003c0003t0012g0063 a0003c0020t0003g0068 a0003c0020t0003g0069 a0003c0020t0003g0070 a0004c0007t0012g0067 a0004c0009t0002g0054 a0004c0009t0002g0059 a0004c0009t0002g0075 a0004c0009t0002g0145 a0004c0009t0010g0055 a0004c0014t0001g0041 a0004c0014t0001g0074 a0004c0014t0013g0147 a0004c0014t0031g0150 a0004c0027t0001g0066 a0004c0028t0002g0065 a0004c0030t0030g0084	38	158	0.2405	24	c.135 others(41): Show c.135+4050_135+4073dupACATATACACGCAAATGTATATAT	JAKMIP3	ENSG00000188385.13	transcript	ENST00000684848.1	protein_coding	2/23		INFO_REALIGN_3_PRIME	chr10	TogoVar
JAKMIP3_chr10_132060946_132189858	132159565	G G	GGGTCCTC others(17): Show GGGTCCTCTCCCTATGTGATGCTCA	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02965.hp1 HG02895.hp2 HG02965.hp1	a0004 a0004	a0004c0014 a0004c0030 a0004c0014 a0004c0030	a0004c0014t0031 a0004c0030t0030 a0004c0014t0031 a0004c0030t0030	a0004c0014t0031g0150 a0004c0030t0030g0084 a0004c0014t0031g0150 a0004c0030t0030g0084	2	158	0.0127	24	c.222 others(43): Show c.2221-3642_2221-3641insTCCTCTCCCTATGTGATGCTCAGG	JAKMIP3	ENSG00000188385.13	transcript	ENST00000684848.1	protein_coding	19/23		INFO_REALIGN_3_PRIME	chr10	TogoVar
JAKMIP3_chr10_132060946_132189858	132159673	C C	CTTCCTGT others(17): Show CTTCCTGTGTGATGCTGGGGGGGGT	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02647.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0097 a0001c0001t0003g0097	1	158	0.0063	24	c.222 others(43): Show c.2221-3536_2221-3535insTTCCTGTGTGATGCTGGGGGGGGT	JAKMIP3	ENSG00000188385.13	transcript	ENST00000684848.1	protein_coding	19/23			chr10	TogoVar
JAKMIP3_chr10_132060946_132189858	132160289	G G	GGGGGGCC others(17): Show GGGGGGCCTCTCGCTGTGTGATGCT	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG03540.hp2 HG02258.hp2 HG03540.hp2	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0010 a0002c0005t0010	a0002c0005t0010g0061 a0002c0005t0010g0095 a0002c0005t0010g0061 a0002c0005t0010g0095	2	158	0.0127	24	c.222 others(43): Show c.2221-2915_2221-2914insCCTCTCGCTGTGTGATGCTGGGGG	JAKMIP3	ENSG00000188385.13	transcript	ENST00000684848.1	protein_coding	19/23		INFO_REALIGN_3_PRIME	chr10	TogoVar
JAKMIP3_chr10_132060946_132189858	132160496	G G	GGGGGGCC others(17): Show GGGGGGCCTCTCCCTGTGTGATGCT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG01175.hp2 HG02040.hp2 others(5): Show HG00099.hp2 HG01175.hp2 HG02040.hp2 HG02523.hp2 HG03831.hp2 HG03834.hp2 NA19091.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0013 a0002c0026 a0002c0047 others(3): Show a0001c0013 a0002c0026 a0002c0047 a0003c0002 a0003c0003 a0004c0011	a0001c0013t0016 a0002c0026t0001 a0002c0047t0022 others(3): Show a0001c0013t0016 a0002c0026t0001 a0002c0047t0022 a0003c0002t0001 a0003c0003t0001 a0004c0011t0001	a0001c0013t0016g0155 a0002c0026t0001g0106 a0002c0047t0022g0045 others(5): Show a0001c0013t0016g0155 a0002c0026t0001g0106 a0002c0047t0022g0045 a0003c0002t0001g0123 a0003c0003t0001g0071 a0003c0003t0001g0076 a0004c0011t0001g0134 a0004c0011t0001g0135	8	158	0.0506	24	c.222 others(43): Show c.2221-2708_2221-2707insCCTCTCCCTGTGTGATGCTGGGGG	JAKMIP3	ENSG00000188385.13	transcript	ENST00000684848.1	protein_coding	19/23		INFO_REALIGN_3_PRIME	chr10	TogoVar
JAKMIP3_chr10_132060946_132189858	132160603	G G	GGGGTCTA others(17): Show GGGGTCTATTCCTGTGTCTTATTGA	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01891.hp1 HG02258.hp1 others(4): Show HG01069.hp2 HG01891.hp1 HG02258.hp1 HG02630.hp1 HG03041.hp2 HG03130.hp2 HG06807.hp2	a0001 a0002 a0001 a0002	a0001c0006 a0001c0017 a0001c0019 others(1): Show a0001c0006 a0001c0017 a0001c0019 a0002c0010	a0001c0006t0003 a0001c0006t0017 a0001c0017t0003 others(2): Show a0001c0006t0003 a0001c0006t0017 a0001c0017t0003 a0001c0019t0003 a0002c0010t0002	a0001c0006t0003g0082 a0001c0006t0003g0083 a0001c0006t0017g0154 others(4): Show a0001c0006t0003g0082 a0001c0006t0003g0083 a0001c0006t0017g0154 a0001c0017t0003g0011 a0001c0017t0003g0104 a0001c0019t0003g0081 a0002c0010t0002g0158	7	158	0.0443	24	c.222 others(43): Show c.2221-2603_2221-2602insTCTATTCCTGTGTCTTATTGAGGG	JAKMIP3	ENSG00000188385.13	transcript	ENST00000684848.1	protein_coding	19/23		INFO_REALIGN_3_PRIME	chr10	TogoVar
JAKMIP3_chr10_132060946_132189858	132160680	G G	GGGGGACC others(17): Show GGGGGACCTCTCCCTGTGTGATGCT	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02258.hp1 HG02630.hp1 others(2): Show HG01891.hp1 HG02258.hp1 HG02630.hp1 HG03130.hp2 HG06807.hp2	a0001 a0002 a0001 a0002	a0001c0006 a0001c0017 a0001c0019 others(1): Show a0001c0006 a0001c0017 a0001c0019 a0002c0010	a0001c0006t0017 a0001c0017t0003 a0001c0019t0003 others(1): Show a0001c0006t0017 a0001c0017t0003 a0001c0019t0003 a0002c0010t0002	a0001c0006t0017g0154 a0001c0017t0003g0011 a0001c0017t0003g0104 others(2): Show a0001c0006t0017g0154 a0001c0017t0003g0011 a0001c0017t0003g0104 a0001c0019t0003g0081 a0002c0010t0002g0158	5	158	0.0317	24	c.222 others(43): Show c.2221-2525_2221-2524insACCTCTCCCTGTGTGATGCTGGGG	JAKMIP3	ENSG00000188385.13	transcript	ENST00000684848.1	protein_coding	19/23		INFO_REALIGN_3_PRIME	chr10	TogoVar
JAKMIP3_chr10_132060946_132189858	132160892	G G	GGGGAGCC others(17): Show GGGGAGCCTCTTCCTGTGTGATGCT	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00642.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0004 a0002c0004t0004	a0002c0004t0004g0040 a0002c0004t0004g0040	1	158	0.0063	24	c.222 others(43): Show c.2221-2316_2221-2315insGGAGCCTCTTCCTGTGTGATGCTG	JAKMIP3	ENSG00000188385.13	transcript	ENST00000684848.1	protein_coding	19/23		INFO_REALIGN_3_PRIME	chr10	TogoVar
JAKMIP3_chr10_132060946_132189858	132161101	G G	GGGGGACC others(17): Show GGGGGACCTCTCCCTGTGTGATGCT	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG01243.hp2 HG01069.hp1 HG01243.hp2	a0002 a0002	a0002c0005 a0002c0037 a0002c0005 a0002c0037	a0002c0005t0001 a0002c0037t0001 a0002c0005t0001 a0002c0037t0001	a0002c0005t0001g0016 a0002c0037t0001g0139 a0002c0005t0001g0016 a0002c0037t0001g0139	2	158	0.0127	24	c.222 others(43): Show c.2221-2104_2221-2103insACCTCTCCCTGTGTGATGCTGGGG	JAKMIP3	ENSG00000188385.13	transcript	ENST00000684848.1	protein_coding	19/23		INFO_REALIGN_3_PRIME	chr10	TogoVar
JAKMIP3_chr10_132060946_132189858	132162756	G G	GTGTATTT others(17): Show GTGTATTTTGGCTGCTGGGTTATTA	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00280.hp2 others(50): Show HG00099.hp1 HG00099.hp2 HG00280.hp2 HG00423.hp1 HG00544.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp2 HG00738.hp2 HG01069.hp1 HG01106.hp1 HG01175.hp2 HG01243.hp2 HG01256.hp2 HG01346.hp2 HG01884.hp2 HG01981.hp1 HG02015.hp2 HG02027.hp2 HG02040.hp2 HG02129.hp1 HG02165.hp1 HG02258.hp2 HG02523.hp2 HG02897.hp1 HG02922.hp1 HG03017.hp2 HG03225.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp2 HG03540.hp2 HG03831.hp2 HG03834.hp2 HG04184.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 NA18522.hp1 NA18952.hp2 NA18954.hp1 NA18960.hp1 NA18966.hp2 NA18983.hp1 NA18999.hp2 NA19004.hp2 NA19081.hp1 NA19081.hp2 NA19091.hp1 NA19091.hp2 NA20300.hp1 NA20805.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0006 a0001c0013 others(22): Show a0001c0001 a0001c0006 a0001c0013 a0001c0015 a0001c0017 a0001c0019 a0001c0034 a0002c0005 a0002c0008 a0002c0010 a0002c0023 a0002c0026 a0002c0037 a0002c0047 a0003c0002 a0003c0003 a0003c0021 a0003c0038 a0003c0051 a0004c0007 a0004c0011 a0004c0014 a0004c0027 a0004c0036 a0004c0045	a0001c0001t0001 a0001c0006t0025 a0001c0013t0001 others(26): Show a0001c0001t0001 a0001c0006t0025 a0001c0013t0001 a0001c0013t0016 a0001c0015t0001 a0001c0017t0027 a0001c0019t0001 a0001c0034t0001 a0002c0005t0001 a0002c0005t0010 a0002c0008t0018 a0002c0010t0009 a0002c0023t0001 a0002c0026t0001 a0002c0026t0026 a0002c0037t0001 a0002c0047t0022 a0003c0002t0001 a0003c0002t0020 a0003c0003t0001 a0003c0021t0001 a0003c0038t0001 a0003c0051t0001 a0004c0007t0001 a0004c0011t0001 a0004c0014t0001 a0004c0027t0001 a0004c0036t0001 a0004c0045t0001	a0001c0001t0001g0116 a0001c0006t0025g0153 a0001c0013t0001g0094 others(50): Show a0001c0001t0001g0116 a0001c0006t0025g0153 a0001c0013t0001g0094 a0001c0013t0001g0129 a0001c0013t0016g0155 a0001c0015t0001g0030 a0001c0017t0027g0012 a0001c0019t0001g0152 a0001c0034t0001g0021 a0002c0005t0001g0016 a0002c0005t0001g0049 a0002c0005t0010g0061 a0002c0005t0010g0095 a0002c0008t0018g0120 a0002c0010t0009g0086 a0002c0010t0009g0087 a0002c0010t0009g0089 a0002c0023t0001g0058 a0002c0026t0001g0106 a0002c0026t0026g0043 a0002c0037t0001g0139 a0002c0047t0022g0045 a0003c0002t0001g0001 a0003c0002t0001g0003 a0003c0002t0001g0013 a0003c0002t0001g0034 a0003c0002t0001g0109 a0003c0002t0001g0110 a0003c0002t0001g0112 a0003c0002t0001g0113 a0003c0002t0001g0123 a0003c0002t0020g0093 a0003c0003t0001g0064 a0003c0003t0001g0071 a0003c0003t0001g0076 a0003c0003t0001g0077 a0003c0003t0001g0131 a0003c0021t0001g0022 a0003c0021t0001g0023 a0003c0021t0001g0032 a0003c0038t0001g0024 a0003c0051t0001g0004 a0004c0007t0001g0108 a0004c0007t0001g0122 a0004c0011t0001g0118 a0004c0011t0001g0134 a0004c0011t0001g0135 a0004c0011t0001g0136 a0004c0014t0001g0041 a0004c0014t0001g0074 a0004c0027t0001g0066 a0004c0036t0001g0039 a0004c0045t0001g0090	53	158	0.3354	24	c.222 others(41): Show c.2221-435_2221-412dupGTTATTATGTATTTTGGCTGCTGG	JAKMIP3	ENSG00000188385.13	transcript	ENST00000684848.1	protein_coding	19/23		INFO_REALIGN_3_PRIME	chr10	TogoVar
JAKMIP3_chr10_132060946_132189858	132168101	G G	GCGTGGAG others(17): Show GCGTGGAGCTGCCGTCCACGTGGGA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01109.hp2 HG01109.hp2	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0019 a0002c0005t0019	a0002c0005t0019g0138 a0002c0005t0019g0138	1	158	0.0063	24	c.17 others(33): Show c.172_*195dupCGTGGAGCTGCCGTCCACGTGGGA	JAKMIP3	ENSG00000188385.13	transcript	ENST00000684848.1	protein_coding	23/24	1093	INFO_REALIGN_3_PRIME	chr10	TogoVar
JAM2_chr21_25634258_25722562	25660782	A A	ATATATAT others(17): Show ATATATATATATATATATATATTTT	intron_variant intron_variant	MODIFIER	NA19086.hp2 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0224 a0001c0001t0008g0224	1	328	0.0031	24	c.67+ others(41): Show c.67+20895_67+20896insATATATATATATATATATATTTTT	JAM2	ENSG00000154721.15	transcript	ENST00000480456.6	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr21	TogoVar
JAM2_chr21_25634258_25722562	25660782	A A	ATATATAT others(17): Show ATATATATATATATATATATTTTTT	intron_variant intron_variant	MODIFIER	NA18952.hp2 NA18952.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0225 a0001c0001t0008g0225	1	328	0.0031	24	c.67+ others(41): Show c.67+20895_67+20896insATATATATATATATATATTTTTTT	JAM2	ENSG00000154721.15	transcript	ENST00000480456.6	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr21	TogoVar
JAM2_chr21_25634258_25722562	25666315	T T	TTTATTAT others(17): Show TTTATTATTATTATTATTATTATTA	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02486.hp1 HG02647.hp1 others(1): Show HG02055.hp2 HG02486.hp1 HG02647.hp1 HG02809.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0005 a0001c0001t0009 a0001c0001t0019 others(1): Show a0001c0001t0005 a0001c0001t0009 a0001c0001t0019 a0002c0003t0007	a0001c0001t0005g0216 a0001c0001t0009g0236 a0001c0001t0019g0315 others(1): Show a0001c0001t0005g0216 a0001c0001t0009g0236 a0001c0001t0019g0315 a0002c0003t0007g0004	4	328	0.0122	24	c.68- others(41): Show c.68-17565_68-17542dupATTATTATTATTATTATTATTATT	JAM2	ENSG00000154721.15	transcript	ENST00000480456.6	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr21	TogoVar
JAM3_chr11_134064072_134157001	134154531	C C	CAGGTGGT others(17): Show CAGGTGGTGCAGCCTCACCCCTCCT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18944.hp2 NA18950.hp1 NA18993.hp1 others(3): Show NA18944.hp2 NA18950.hp1 NA18993.hp1 NA19081.hp2 NA19088.hp2 NA20300.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0001c0001t0010 a0002c0003t0067 a0001c0001t0001 a0001c0001t0010 a0002c0003t0067	a0001c0001t0001g0329 a0001c0001t0010g0016 a0001c0001t0010g0276 others(2): Show a0001c0001t0001g0329 a0001c0001t0010g0016 a0001c0001t0010g0276 a0001c0001t0010g0277 a0002c0003t0067g0267	6	390	0.0154	24	c.53 others(35): Show c.5350_*5351insAGGTGGTGCAGCCTCACCCCTCCT	JAM3	ENSG00000166086.13	transcript	ENST00000299106.9	protein_coding		2531		chr11	TogoVar
JAM3_chr11_134064072_134157001	134154547	A A	ACCCCTCC others(17): Show ACCCCTCCTGGGTGGTGCAGCCTCG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp2 HG00280.hp1 HG00323.hp1 others(96): Show HG00140.hp2 HG00280.hp1 HG00323.hp1 HG00408.hp1 HG00423.hp1 HG00438.hp2 HG00544.hp2 HG00597.hp1 HG00609.hp2 HG00621.hp1 HG00735.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01106.hp2 HG01123.hp1 HG01168.hp1 HG01192.hp1 HG01243.hp2 HG01255.hp2 HG01358.hp2 HG01433.hp1 HG01978.hp2 HG02015.hp2 HG02040.hp1 HG02056.hp1 HG02080.hp1 HG02155.hp1 HG02165.hp2 HG02559.hp2 HG02615.hp2 HG02683.hp1 HG02717.hp1 HG02735.hp1 HG02738.hp1 HG02886.hp2 HG02895.hp1 HG02970.hp2 HG03139.hp1 HG03195.hp1 HG03486.hp1 HG03492.hp1 HG03516.hp1 HG03654.hp1 HG03669.hp2 HG03710.hp1 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp2 NA18522.hp2 NA18612.hp1 NA18943.hp1 NA18946.hp2 NA18947.hp2 NA18950.hp2 NA18952.hp2 NA18955.hp1 NA18956.hp1 NA18959.hp1 NA18960.hp1 NA18962.hp1 NA18966.hp2 NA18967.hp1 NA18969.hp1 NA18971.hp1 NA18975.hp1 NA18980.hp1 NA18982.hp2 NA18984.hp1 NA18985.hp2 NA18988.hp1 NA18994.hp2 NA18995.hp1 NA18998.hp2 NA19004.hp2 NA19012.hp1 NA19043.hp1 NA19056.hp2 NA19064.hp1 NA19065.hp1 NA19066.hp2 NA19068.hp1 NA19070.hp2 NA19074.hp1 NA19079.hp1 NA19083.hp2 NA19084.hp2 NA19086.hp2 NA19088.hp1 NA19091.hp1 NA19240.hp1 NA20129.hp2 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0006 a0001 a0002 a0006	a0001c0001 a0001c0005 a0002c0003 others(1): Show a0001c0001 a0001c0005 a0002c0003 a0006c0007	a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 others(20): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0010 a0001c0001t0012 a0001c0001t0017 a0001c0001t0022 a0001c0001t0023 a0001c0001t0026 a0001c0001t0031 a0001c0001t0033 a0001c0001t0041 a0001c0001t0042 a0001c0001t0044 a0001c0001t0045 a0001c0001t0047 a0001c0001t0066 a0001c0001t0068 a0001c0005t0001 a0002c0003t0010 a0002c0003t0031 a0006c0007t0001	a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0066 others(89): Show a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0101 a0001c0001t0001g0149 a0001c0001t0001g0283 a0001c0001t0001g0284 a0001c0001t0001g0285 a0001c0001t0001g0286 a0001c0001t0001g0287 a0001c0001t0001g0288 a0001c0001t0001g0289 a0001c0001t0001g0290 a0001c0001t0001g0296 a0001c0001t0001g0297 a0001c0001t0001g0298 a0001c0001t0001g0299 a0001c0001t0001g0300 a0001c0001t0001g0301 a0001c0001t0001g0303 a0001c0001t0001g0304 a0001c0001t0001g0305 a0001c0001t0001g0306 a0001c0001t0001g0307 a0001c0001t0001g0308 a0001c0001t0001g0309 a0001c0001t0001g0314 a0001c0001t0001g0315 a0001c0001t0001g0316 a0001c0001t0001g0317 a0001c0001t0001g0318 a0001c0001t0001g0319 a0001c0001t0001g0320 a0001c0001t0001g0321 a0001c0001t0001g0322 a0001c0001t0001g0323 a0001c0001t0001g0324 a0001c0001t0001g0328 a0001c0001t0001g0330 a0001c0001t0001g0331 a0001c0001t0001g0334 a0001c0001t0001g0336 a0001c0001t0001g0337 a0001c0001t0001g0342 a0001c0001t0001g0343 a0001c0001t0005g0148 a0001c0001t0006g0235 a0001c0001t0006g0236 a0001c0001t0006g0240 a0001c0001t0006g0241 a0001c0001t0006g0349 a0001c0001t0007g0015 a0001c0001t0007g0237 a0001c0001t0007g0239 a0001c0001t0007g0242 a0001c0001t0007g0243 a0001c0001t0007g0244 a0001c0001t0007g0246 a0001c0001t0007g0248 a0001c0001t0007g0249 a0001c0001t0007g0250 a0001c0001t0010g0270 a0001c0001t0010g0272 a0001c0001t0010g0274 a0001c0001t0012g0017 a0001c0001t0012g0018 a0001c0001t0012g0310 a0001c0001t0012g0333 a0001c0001t0012g0341 a0001c0001t0017g0251 a0001c0001t0017g0252 a0001c0001t0022g0234 a0001c0001t0022g0258 a0001c0001t0023g0245 a0001c0001t0023g0247 a0001c0001t0026g0280 a0001c0001t0026g0281 a0001c0001t0031g0266 a0001c0001t0033g0335 a0001c0001t0041g0325 a0001c0001t0042g0327 a0001c0001t0044g0313 a0001c0001t0045g0312 a0001c0001t0047g0339 a0001c0001t0066g0265 a0001c0001t0068g0269 a0001c0005t0001g0326 a0002c0003t0010g0273 a0002c0003t0010g0352 a0002c0003t0031g0271 a0006c0007t0001g0340	99	390	0.2539	24	c.53 others(35): Show c.5366_*5367insCCCCTCCTGGGTGGTGCAGCCTCG	JAM3	ENSG00000166086.13	transcript	ENST00000299106.9	protein_coding		2547		chr11	TogoVar
JAM3_chr11_134064072_134157001	134154570	C C	CGCCCCTC others(17): Show CGCCCCTCCTGGGTGGTGCAGCCTT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19090.hp1 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0275 a0001c0001t0010g0275	1	390	0.0026	24	c.53 others(35): Show c.5389_*5390insGCCCCTCCTGGGTGGTGCAGCCTT	JAM3	ENSG00000166086.13	transcript	ENST00000299106.9	protein_coding		2570		chr11	TogoVar
JARID2_chr6_15241069_15527042	15248436	T T	TGGGAGCG others(17): Show TGGGAGCGGGGGCGGGGGCGGGGGC	intron_variant intron_variant	MODIFIER	HG02004.hp1 HG02004.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0174 a0001c0001t0001g0174	1	284	0.0035	24	c.45+ others(39): Show c.45+1871_45+1872insGGGGCGGGAGCGGGGGCGGGGGCG	JARID2	ENSG00000008083.14	transcript	ENST00000341776.7	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr6	TogoVar
JARID2_chr6_15241069_15527042	15413002	G G	GTTTTTTT others(17): Show GTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0142 a0001c0001t0002g0142	1	284	0.0035	24	c.323 others(41): Show c.323+2642_323+2643insTTTTTTTTTTTTTTTTTTTTTTTT	JARID2	ENSG00000008083.14	transcript	ENST00000341776.7	protein_coding	3/17		INFO_REALIGN_3_PRIME	chr6	TogoVar
JARID2_chr6_15241069_15527042	15415517	G G	GCCGGGCA others(17): Show GCCGGGCAGAGGCGCCCCTCACCTC	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG03471.hp1 HG04199.hp1 others(2): Show HG02145.hp1 HG03471.hp1 HG04199.hp1 NA18968.hp2 NA19000.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0023 a0001c0003t0001 others(2): Show a0001c0001t0001 a0001c0001t0023 a0001c0003t0001 a0001c0003t0003 a0001c0003t0035	a0001c0001t0001g0146 a0001c0001t0023g0151 a0001c0003t0001g0092 others(2): Show a0001c0001t0001g0146 a0001c0001t0023g0151 a0001c0003t0001g0092 a0001c0003t0003g0068 a0001c0003t0035g0069	5	284	0.0176	24	c.323 others(41): Show c.323+5181_323+5204dupGCAGAGGCGCCCCTCACCTCCCGG	JARID2	ENSG00000008083.14	transcript	ENST00000341776.7	protein_coding	3/17		INFO_REALIGN_3_PRIME	chr6	TogoVar
JAZF1_chr7_27825577_28185795	27849752	G G	GACACACA others(17): Show GACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0110 a0001c0001t0001g0110	1	206	0.0049	24	c.386 others(41): Show c.386-8886_386-8885insGTGTGTGTGTGTGTGTGTGTGTGT	JAZF1	ENSG00000153814.13	transcript	ENST00000283928.10	protein_coding	3/4			chr7	TogoVar
JAZF1_chr7_27825577_28185795	27849752	G G	GACACAGA others(17): Show GACACAGACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0044 a0001c0001t0002g0044	1	206	0.0049	24	c.386 others(41): Show c.386-8886_386-8885insGTGTGTGTGTGTGTGTGTCTGTGT	JAZF1	ENSG00000153814.13	transcript	ENST00000283928.10	protein_coding	3/4			chr7	TogoVar
JAZF1_chr7_27825577_28185795	28110504	A A	AAAGGAAA others(17): Show AAAGGAAAGGAAAGGAAAGGAAAGG	intron_variant intron_variant	MODIFIER	HG03139.hp2 NA18612.hp2 NA19085.hp1 others(1): Show HG03139.hp2 NA18612.hp2 NA19085.hp1 NA19085.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0008 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0008 a0001c0001t0010	a0001c0001t0001g0174 a0001c0001t0002g0016 a0001c0001t0008g0039 others(1): Show a0001c0001t0001g0174 a0001c0001t0002g0016 a0001c0001t0008g0039 a0001c0001t0010g0011	4	206	0.0194	24	c.115 others(43): Show c.115+69958_115+69959insCCTTTCCTTTCCTTTCCTTTCCTT	JAZF1	ENSG00000153814.13	transcript	ENST00000283928.10	protein_coding	1/4			chr7	TogoVar
JHY_chr11_122877759_122968862	122922809	C C	CAAAAAAA others(17): Show CAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG02896.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0025 a0001c0001t0025	a0001c0001t0025g0299 a0001c0001t0025g0299	1	332	0.0030	24	c.865 others(41): Show c.865-2084_865-2061dupAAAAAAAAAAAAAAAAAAAAAAAA	JHY	ENSG00000109944.11	transcript	ENST00000227349.7	protein_coding	3/8		INFO_REALIGN_3_PRIME	chr11	TogoVar
JKAMP_chr14_59479517_59510410	59502752	T T	TTTTGTTT others(17): Show TTTTGTTTTTTTGTTTTTGTTTTTG	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG03225.hp1 HG01243.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0119 a0001c0001t0001g0121 a0001c0001t0001g0119 a0001c0001t0001g0121	2	358	0.0056	24	c.718 others(41): Show c.718-1099_718-1098insGTTTTTTTGTTTTTGTTTTTGTTT	JKAMP	ENSG00000050130.18	transcript	ENST00000616435.5	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr14	TogoVar
JKAMP_chr14_59479517_59510410	59502752	T T	TTTTGTTT others(17): Show TTTTGTTTTTTTTTTTTTGTTTTTG	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG01515.hp1 HG01517.hp2 HG00280.hp1 HG01515.hp1 HG01517.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0114 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0114 a0001c0001t0001g0117 a0001c0001t0001g0118	3	358	0.0084	24	c.718 others(41): Show c.718-1099_718-1098insGTTTTTTTTTTTTTGTTTTTGTTT	JKAMP	ENSG00000050130.18	transcript	ENST00000616435.5	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr14	TogoVar
JKAMP_chr14_59479517_59510410	59508399	T T	TACACACA others(17): Show TACACACACACACACACACACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp1 HG01081.hp2 HG01099.hp1 others(29): Show HG00280.hp1 HG01081.hp2 HG01099.hp1 HG01168.hp2 HG01358.hp2 HG01993.hp1 HG02015.hp1 HG02055.hp1 HG02055.hp2 HG02258.hp2 HG02280.hp1 HG02572.hp2 HG02723.hp1 HG02886.hp1 HG02895.hp1 HG03209.hp1 HG03239.hp1 HG03490.hp2 HG03540.hp2 HG03669.hp1 HG03710.hp1 HG06807.hp1 NA18969.hp1 NA18977.hp1 NA18992.hp1 NA18999.hp2 NA19004.hp1 NA19009.hp2 NA19081.hp2 NA19086.hp2 NA19240.hp1 NA20300.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0003c0004t0002	a0001c0001t0001g0031 a0001c0001t0001g0049 a0001c0001t0001g0114 others(19): Show a0001c0001t0001g0031 a0001c0001t0001g0049 a0001c0001t0001g0114 a0001c0001t0001g0135 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0005 a0001c0001t0002g0006 a0001c0001t0002g0007 a0001c0001t0002g0038 a0001c0001t0002g0054 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0075 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0003g0010 a0001c0001t0003g0013 a0001c0001t0003g0015 a0001c0001t0003g0083 a0003c0004t0002g0004	32	358	0.0894	24	c.43 others(35): Show c.4327_*4328insACACACACACACACACACACACAC	JKAMP	ENSG00000050130.18	transcript	ENST00000616435.5	protein_coding		2990		chr14	TogoVar
JMJD1C_chr10_63162225_63470977	63243103	T T	TTATATAT others(17): Show TTATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG04115.hp1 NA18941.hp1 HG01099.hp1 HG04115.hp1 NA18941.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0230 a0002c0002t0001g0260 a0002c0002t0001g0268 a0002c0002t0001g0230 a0002c0002t0001g0260 a0002c0002t0001g0268	3	310	0.0097	24	c.447 others(43): Show c.447+21547_447+21548insTATATATATATATATATATATATA	JMJD1C	ENSG00000171988.20	transcript	ENST00000399262.7	protein_coding	3/25			chr10	TogoVar
JMJD1C_chr10_63162225_63470977	63248529	G G	GATAGATA others(17): Show GATAGATAGATAAATAAATAAATAA	intron_variant intron_variant	MODIFIER	NA19085.hp1 NA19085.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0252 a0002c0002t0001g0252	1	310	0.0032	24	c.447 others(43): Show c.447+16121_447+16122insTTATTTATTTATTTATCTATCTAT	JMJD1C	ENSG00000171988.20	transcript	ENST00000399262.7	protein_coding	3/25			chr10	TogoVar
JMJD1C_chr10_63162225_63470977	63248529	G G	GATAGATA others(17): Show GATAGATAGATAGATAAATAAATAA	intron_variant intron_variant	MODIFIER	NA19004.hp2 NA19004.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0182 a0003c0003t0001g0182	1	310	0.0032	24	c.447 others(43): Show c.447+16121_447+16122insTTATTTATTTATCTATCTATCTAT	JMJD1C	ENSG00000171988.20	transcript	ENST00000399262.7	protein_coding	3/25			chr10	TogoVar

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