Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CNMD_chr13_52698264_52744820	52701790	T T	TACACACA others(17): Show TACACACACAAAGACACACACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01109.hp1 HG01109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0234 a0001c0001t0001g0234	1	330	0.0030	24	c.18 others(35): Show c.1804_*1805insGTGTGTGTGTGTCTTTGTGTGTGT	CNMD	ENSG00000136110.13	transcript	ENST00000377962.8	protein_coding		1473		chr13	TogoVar
CNMD_chr13_52698264_52744820	52701802	G G	GACACACA others(17): Show GACACACACACACACACACACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00609.hp1 HG00738.hp2 HG01074.hp2 others(23): Show HG00609.hp1 HG00738.hp2 HG01074.hp2 HG01169.hp1 HG01169.hp2 HG01496.hp2 HG01516.hp2 HG01517.hp2 HG01975.hp1 HG02015.hp2 HG02040.hp2 HG02523.hp1 HG03540.hp2 HG03654.hp2 HG03669.hp2 HG03831.hp1 NA18950.hp2 NA18954.hp2 NA18960.hp1 NA18971.hp2 NA18982.hp1 NA18982.hp2 NA18993.hp1 NA19043.hp1 NA19066.hp2 NA19089.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0002c0002t0001	a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0022 others(21): Show a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0022 a0001c0001t0001g0025 a0001c0001t0001g0037 a0001c0001t0001g0046 a0001c0001t0001g0049 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0084 a0001c0001t0001g0123 a0001c0001t0001g0126 a0001c0001t0001g0134 a0001c0001t0001g0144 a0001c0001t0001g0155 a0001c0001t0001g0166 a0001c0001t0001g0173 a0001c0001t0001g0209 a0001c0001t0002g0121 a0001c0001t0006g0033 a0001c0001t0006g0119 a0002c0002t0001g0036 a0002c0002t0001g0038 a0002c0002t0001g0183	26	330	0.0788	24	c.17 others(35): Show c.1792_*1793insGTGTGTGTGTGTGTGTGTGTGTGT	CNMD	ENSG00000136110.13	transcript	ENST00000377962.8	protein_coding		1461		chr13	TogoVar
CNN1_chr19_11533851_11555323	11552290	G G	GGAGGGTC others(17): Show GGAGGGTCTGGCACTGCCCCAGGTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0202 a0001c0002t0002g0202	1	392	0.0026	24	c.24 others(35): Show c.2495_*2496insGAGGGTCTGGCACTGCCCCAGGTT	CNN1	ENSG00000130176.8	transcript	ENST00000252456.7	protein_coding		1968		chr19	TogoVar
CNNM1_chr10_99324356_99399330	99340876	T T	TCCTGCCT others(17): Show TCCTGCCTGCCTGCCTGCCTGCCTG	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp2 NA19240.hp1 others(1): Show HG03130.hp1 HG03130.hp2 NA19240.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0006	a0001c0001t0001g0170 a0001c0001t0002g0214 a0001c0001t0003g0169 others(1): Show a0001c0001t0001g0170 a0001c0001t0002g0214 a0001c0001t0003g0169 a0001c0001t0006g0270	4	320	0.0125	24	c.157 others(43): Show c.1573+9929_1573+9952dupCCTGCCTGCCTGCCTGCCTGCCTG	CNNM1	ENSG00000119946.12	transcript	ENST00000356713.5	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
CNNM1_chr10_99324356_99399330	99340876	T T	TCCTTCCT others(17): Show TCCTTCCTGCCTGCCTGCCTGCCTG	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00741.hp1 HG01069.hp1 others(31): Show HG00558.hp1 HG00741.hp1 HG01069.hp1 HG01081.hp2 HG01884.hp2 HG01928.hp2 HG01943.hp2 HG01993.hp2 HG02015.hp1 HG02083.hp1 HG02155.hp2 HG02293.hp2 HG02451.hp1 HG02602.hp2 HG03516.hp1 HG04115.hp2 HG04199.hp2 NA18747.hp2 NA18945.hp1 NA18952.hp1 NA18963.hp2 NA18965.hp1 NA18968.hp2 NA18971.hp1 NA18975.hp2 NA18990.hp1 NA18999.hp2 NA19002.hp1 NA19005.hp1 NA19056.hp1 NA19060.hp2 NA19075.hp1 NA19081.hp2 NA19091.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0006 a0001c0001 a0003c0006	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(6): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0018 a0001c0001t0025 a0001c0001t0027 a0001c0001t0030 a0003c0006t0003	a0001c0001t0001g0003 a0001c0001t0001g0138 a0001c0001t0001g0141 others(29): Show a0001c0001t0001g0003 a0001c0001t0001g0138 a0001c0001t0001g0141 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0001g0300 a0001c0001t0001g0301 a0001c0001t0003g0002 a0001c0001t0003g0143 a0001c0001t0003g0178 a0001c0001t0005g0013 a0001c0001t0005g0177 a0001c0001t0005g0179 a0001c0001t0005g0180 a0001c0001t0005g0181 a0001c0001t0005g0182 a0001c0001t0005g0183 a0001c0001t0005g0185 a0001c0001t0005g0186 a0001c0001t0005g0187 a0001c0001t0006g0192 a0001c0001t0018g0174 a0001c0001t0025g0130 a0001c0001t0027g0184 a0001c0001t0030g0142 a0003c0006t0003g0139 a0003c0006t0003g0140	34	320	0.1063	24	c.157 others(43): Show c.1573+9919_1573+9920insTCCTGCCTGCCTGCCTGCCTGCCT	CNNM1	ENSG00000119946.12	transcript	ENST00000356713.5	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
CNNM1_chr10_99324356_99399330	99340876	T T	TCCTTCCT others(17): Show TCCTTCCTTCCTGCCTGCCTGCCTG	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00438.hp1 HG00544.hp2 others(26): Show HG00408.hp1 HG00438.hp1 HG00544.hp2 HG00597.hp2 HG00673.hp2 HG01109.hp2 HG01255.hp2 HG02040.hp2 HG02080.hp1 HG02132.hp2 HG02559.hp2 HG02647.hp2 HG02717.hp1 HG03098.hp2 HG03225.hp1 HG03540.hp2 HG04184.hp1 NA18906.hp1 NA18950.hp1 NA18954.hp2 NA18983.hp1 NA18999.hp1 NA19001.hp1 NA19003.hp1 NA19043.hp1 NA19060.hp1 NA19072.hp1 NA19074.hp2 NA19084.hp1	a0001 a0001	a0001c0001 a0001c0008 a0001c0001 a0001c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0017 a0001c0001t0022 a0001c0001t0031 a0001c0008t0020	a0001c0001t0001g0010 a0001c0001t0001g0150 a0001c0001t0001g0151 others(26): Show a0001c0001t0001g0010 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0002g0165 a0001c0001t0002g0166 a0001c0001t0002g0167 a0001c0001t0002g0168 a0001c0001t0002g0310 a0001c0001t0003g0132 a0001c0001t0003g0147 a0001c0001t0003g0148 a0001c0001t0003g0149 a0001c0001t0003g0153 a0001c0001t0003g0154 a0001c0001t0003g0157 a0001c0001t0003g0158 a0001c0001t0004g0146 a0001c0001t0004g0200 a0001c0001t0004g0202 a0001c0001t0004g0203 a0001c0001t0005g0159 a0001c0001t0008g0145 a0001c0001t0017g0201 a0001c0001t0022g0298 a0001c0001t0031g0204 a0001c0008t0020g0211	29	320	0.0906	24	c.157 others(43): Show c.1573+9919_1573+9920insTCCTTCCTGCCTGCCTGCCTGCCT	CNNM1	ENSG00000119946.12	transcript	ENST00000356713.5	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
CNNM1_chr10_99324356_99399330	99347576	A A	AACACACA others(17): Show AACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00438.hp2 HG00597.hp1 others(57): Show HG00099.hp2 HG00438.hp2 HG00597.hp1 HG00609.hp1 HG00609.hp2 HG00642.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG01070.hp2 HG01074.hp1 HG01167.hp1 HG01261.hp1 HG01361.hp1 HG01433.hp1 HG01496.hp1 HG01496.hp2 HG01884.hp2 HG01975.hp2 HG01981.hp2 HG02015.hp2 HG02055.hp2 HG02451.hp1 HG02523.hp2 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02698.hp1 HG02896.hp1 HG02897.hp2 HG03130.hp1 HG03516.hp1 HG03688.hp2 HG03710.hp1 HG03831.hp1 HG04228.hp2 NA18950.hp2 NA18952.hp1 NA18952.hp2 NA18954.hp1 NA18960.hp1 NA18960.hp2 NA18963.hp1 NA18969.hp2 NA18971.hp2 NA18975.hp2 NA18983.hp2 NA18991.hp2 NA19001.hp2 NA19009.hp2 NA19010.hp2 NA19054.hp2 NA19066.hp1 NA19067.hp2 NA19070.hp2 NA19074.hp1 NA19079.hp2 NA19087.hp2 NA19091.hp2 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0004 a0002c0003 a0001c0001 a0001c0004 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0014 a0001c0001t0015 a0001c0001t0021 a0001c0004t0001 a0002c0003t0001 a0002c0003t0002	a0001c0001t0001g0009 a0001c0001t0001g0035 a0001c0001t0001g0040 others(55): Show a0001c0001t0001g0009 a0001c0001t0001g0035 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0051 a0001c0001t0001g0056 a0001c0001t0001g0058 a0001c0001t0001g0060 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0109 a0001c0001t0001g0113 a0001c0001t0001g0115 a0001c0001t0001g0117 a0001c0001t0001g0124 a0001c0001t0001g0126 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0002g0001 a0001c0001t0002g0079 a0001c0001t0002g0254 a0001c0001t0003g0008 a0001c0001t0003g0055 a0001c0001t0003g0059 a0001c0001t0003g0067 a0001c0001t0003g0073 a0001c0001t0003g0077 a0001c0001t0003g0078 a0001c0001t0003g0081 a0001c0001t0003g0123 a0001c0001t0003g0169 a0001c0001t0004g0061 a0001c0001t0005g0066 a0001c0001t0005g0080 a0001c0001t0005g0197 a0001c0001t0006g0192 a0001c0001t0014g0057 a0001c0001t0015g0065 a0001c0001t0021g0076 a0001c0004t0001g0116 a0001c0004t0001g0118 a0001c0004t0001g0119 a0002c0003t0001g0007 a0002c0003t0001g0053 a0002c0003t0001g0054 a0002c0003t0002g0052	60	320	0.1875	24	c.157 others(43): Show c.1574-9913_1574-9912insCACACACACACACACACACACACA	CNNM1	ENSG00000119946.12	transcript	ENST00000356713.5	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
CNNM1_chr10_99324356_99399330	99356562	C C	CAGAAAGA others(17): Show CAGAAAGAAAGAAAGAAAGAAAGAA	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01081.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0019 a0001c0001t0007g0019	1	320	0.0031	24	c.157 others(41): Show c.1574-928_1574-905dupGAAAGAAAGAAAGAAAGAAAGAAA	CNNM1	ENSG00000119946.12	transcript	ENST00000356713.5	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
CNNM2_chr10_102913294_103095222	102976611	A A	ATTTTTTT others(17): Show ATTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02027.hp2 HG03490.hp2 HG03492.hp2 HG02027.hp2 HG03490.hp2 HG03492.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0002c0004 a0001c0002 a0002c0004	a0001c0002t0003 a0002c0004t0060 a0002c0004t0061 a0001c0002t0003 a0002c0004t0060 a0002c0004t0061	a0001c0002t0003g0233 a0002c0004t0060g0197 a0002c0004t0061g0198 a0001c0002t0003g0233 a0002c0004t0060g0197 a0002c0004t0061g0198	3	270	0.0111	24	c.162 others(45): Show c.1621+56515_1621+56538dupTTTTTTTTTTTTTTTTTTTTTTTT	CNNM2	ENSG00000148842.18	transcript	ENST00000369878.9	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr10	TogoVar
CNNM2_chr10_102913294_103095222	103087140	A A	ATTTTTTT others(17): Show ATTTTTTTTTTTTTTTTTTTTTTTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03492.hp2 HG03492.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0061 a0002c0004t0061	a0002c0004t0061g0198 a0002c0004t0061g0198	1	270	0.0037	24	c.99 others(35): Show c.9969_*9992dupTTTTTTTTTTTTTTTTTTTTTTTT	CNNM2	ENSG00000148842.18	transcript	ENST00000369878.9	protein_coding	8/8	9993	INFO_REALIGN_3_PRIME	chr10	TogoVar
CNOT10_chr3_32680188_32778875	32727979	T T	TTTTATTT others(17): Show TTTTATTTATTTATTTATTTATTTA	intron_variant intron_variant	MODIFIER	HG02015.hp2 NA18993.hp1 NA19087.hp2 HG02015.hp2 NA18993.hp1 NA19087.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010	3	354	0.0085	24	c.121 others(41): Show c.1215+117_1215+140dupATTTATTTATTTATTTATTTATTT	CNOT10	ENSG00000182973.20	transcript	ENST00000328834.10	protein_coding	10/18		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNOT10_chr3_32680188_32778875	32754489	A A	AAAAAAAA others(17): Show AAAAAAAATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0197 a0001c0001t0001g0197	1	354	0.0028	24	c.159 others(43): Show c.1596-4968_1596-4967insAAAAAATATATATATATATATATA	CNOT10	ENSG00000182973.20	transcript	ENST00000328834.10	protein_coding	13/18		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNOT10_chr3_32680188_32778875	32754489	A A	AAAAAATA others(17): Show AAAAAATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0156 a0001c0001t0001g0156	1	354	0.0028	24	c.159 others(43): Show c.1596-4968_1596-4967insAAAATATATATATATATATATATA	CNOT10	ENSG00000182973.20	transcript	ENST00000328834.10	protein_coding	13/18		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNOT11_chr2_101247886_101275316	101259069	G G	GGCTGCAG others(17): Show GGCTGCAGTGAGCTGTGATTGCGCC	intron_variant intron_variant	MODIFIER	NA19001.hp1 NA19001.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0053 a0001c0001t0001g0053	1	378	0.0027	24	c.679 others(41): Show c.679+1115_679+1138dupGCTGCAGTGAGCTGTGATTGCGCC	CNOT11	ENSG00000158435.8	transcript	ENST00000289382.8	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNOT1_chr16_58514951_58634826	58539480	C C	CACACACA others(17): Show CACACACACACACACACACACACAG	intron_variant intron_variant	MODIFIER	HG03471.hp2 NA18953.hp2 NA18957.hp1 others(3): Show HG03471.hp2 NA18953.hp2 NA18957.hp1 NA18969.hp1 NA19002.hp1 NA19060.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0003 a0001c0002t0001 a0001c0002t0003	a0001c0002t0001g0004 a0001c0002t0001g0077 a0001c0002t0001g0084 others(3): Show a0001c0002t0001g0004 a0001c0002t0001g0077 a0001c0002t0001g0084 a0001c0002t0001g0101 a0001c0002t0003g0070 a0001c0002t0003g0180	6	308	0.0195	24	c.499 others(41): Show c.4992+287_4992+288insCTGTGTGTGTGTGTGTGTGTGTGT	CNOT1	ENSG00000125107.19	transcript	ENST00000317147.10	protein_coding	35/48			chr16	TogoVar
CNOT1_chr16_58514951_58634826	58586358	A A	AGGGGGGA others(17): Show AGGGGGGAGGGGAGGGGAGGGGGAG	intron_variant intron_variant	MODIFIER	NA19067.hp1 NA19067.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0074 a0001c0002t0001g0074	1	308	0.0033	24	c.637 others(39): Show c.637+186_637+187insCTCCCCCTCCCCTCCCCTCCCCCC	CNOT1	ENSG00000125107.19	transcript	ENST00000317147.10	protein_coding	7/48			chr16	TogoVar
CNOT3_chr19_54132762_54160681	54142433	T T	TACACACA others(17): Show TACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02572.hp1 HG02622.hp1 others(2): Show HG01109.hp2 HG02572.hp1 HG02622.hp1 HG06807.hp1 NA18982.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0067 a0001c0001t0001g0083 a0001c0001t0001g0084 others(2): Show a0001c0001t0001g0067 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0002t0001g0137 a0001c0002t0001g0138	5	223	0.0224	24	c.-50 others(39): Show c.-50-478_-50-477insACACACACACACACACACACACAC	CNOT3	ENSG00000088038.20	transcript	ENST00000221232.11	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr19	TogoVar
CNOT4_chr7_135356795_135515102	135453826	T T	TTATATAT others(17): Show TTATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01106.hp1	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0001 a0004c0005t0001	a0004c0005t0001g0126 a0004c0005t0001g0126	1	362	0.0028	24	c.-92 others(43): Show c.-92-15404_-92-15403insTATATATATATATATATATATATA	CNOT4	ENSG00000080802.21	transcript	ENST00000541284.6	protein_coding	1/11			chr7	TogoVar
CNOT4_chr7_135356795_135515102	135472514	A A	AAAAAAAA others(17): Show AAAAAAAAAAAATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0213 a0001c0001t0001g0213	1	362	0.0028	24	c.-92 others(43): Show c.-92-34092_-92-34091insATATATATATATATTTTTTTTTTT	CNOT4	ENSG00000080802.21	transcript	ENST00000541284.6	protein_coding	1/11			chr7	TogoVar
CNOT6L_chr4_77708387_77824368	77768474	A A	AATATATA others(17): Show AATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02080.hp1 HG02080.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0022 a0001c0001t0007g0022	1	328	0.0031	24	c.400 others(41): Show c.400+4583_400+4606dupATATATATATATATATATATATAT	CNOT6L	ENSG00000138767.14	transcript	ENST00000504123.7	protein_coding	4/11			chr4	TogoVar
CNOT6L_chr4_77708387_77824368	77807276	C C	CAAAAAAA others(17): Show CAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0176 a0001c0001t0005g0176	1	328	0.0031	24	c.5+1 others(39): Show c.5+12027_5+12028insTTTTTTTTTTTTTTTTTTTTTTTT	CNOT6L	ENSG00000138767.14	transcript	ENST00000504123.7	protein_coding	1/11			chr4	TogoVar
CNOT6L_chr4_77708387_77824368	77819049	G G	GACACACA others(17): Show GACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01169.hp2 HG02486.hp1 HG04115.hp2 others(4): Show HG01169.hp2 HG02486.hp1 HG04115.hp2 NA18944.hp2 NA19004.hp1 NA19063.hp2 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0261 a0001c0001t0001g0262 a0001c0001t0001g0263 others(4): Show a0001c0001t0001g0261 a0001c0001t0001g0262 a0001c0001t0001g0263 a0001c0001t0001g0264 a0001c0001t0001g0265 a0001c0001t0001g0266 a0001c0001t0001g0267	7	328	0.0213	24	c.5+2 others(35): Show c.5+231_5+254dupGTGTGTGTGTGTGTGTGTGTGTGT	CNOT6L	ENSG00000138767.14	transcript	ENST00000504123.7	protein_coding	1/11			chr4	TogoVar
CNOT6_chr5_180489379_180583358	180533312	C C	CTATATAT others(17): Show CTATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA18939.hp1 NA18963.hp2 NA18939.hp1 NA18963.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0071 a0001c0001t0002g0072	2	334	0.0060	24	c.112 others(41): Show c.112+3932_112+3955dupATATATATATATATATATATATAT	CNOT6	ENSG00000113300.13	transcript	ENST00000261951.9	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr5	TogoVar
CNOT6_chr5_180489379_180583358	180538686	G G	GTATATAT others(17): Show GTATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03704.hp1 NA19060.hp2 HG03704.hp1 NA19060.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0078 a0001c0001t0002g0086 a0001c0001t0002g0078 a0001c0001t0002g0086	2	334	0.0060	24	c.112 others(41): Show c.112+9305_112+9328dupTATATATATATATATATATATATA	CNOT6	ENSG00000113300.13	transcript	ENST00000261951.9	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr5	TogoVar
CNPY1_chr7_155496129_155551559	155527030	T T	TTTTCTTT others(17): Show TTTTCTTTCTTTCTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00741.hp1 HG01070.hp1 others(13): Show HG00323.hp2 HG00741.hp1 HG01070.hp1 HG02145.hp2 HG02886.hp2 HG03139.hp2 HG03927.hp1 NA18944.hp1 NA18951.hp1 NA18964.hp2 NA18994.hp1 NA18998.hp1 NA19011.hp1 NA19062.hp2 NA19075.hp2 NA19081.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005	a0001c0001t0002 a0001c0001t0004 a0001c0001t0007 others(6): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0007 a0001c0001t0009 a0001c0001t0013 a0001c0002t0005 a0001c0002t0029 a0001c0003t0001 a0001c0005t0036	a0001c0001t0002g0066 a0001c0001t0002g0069 a0001c0001t0002g0093 others(13): Show a0001c0001t0002g0066 a0001c0001t0002g0069 a0001c0001t0002g0093 a0001c0001t0002g0097 a0001c0001t0002g0162 a0001c0001t0002g0278 a0001c0001t0004g0116 a0001c0001t0004g0125 a0001c0001t0007g0095 a0001c0001t0009g0277 a0001c0001t0013g0100 a0001c0002t0005g0291 a0001c0002t0005g0304 a0001c0002t0029g0368 a0001c0003t0001g0281 a0001c0005t0036g0063	16	426	0.0376	24	c.100 others(43): Show c.100-17957_100-17934dupGAAAGAAAGAAAGAAAGAAAGAAA	CNPY1	ENSG00000146910.14	transcript	ENST00000636446.2	protein_coding	2/4			chr7	TogoVar
CNPY1_chr7_155496129_155551559	155527054	C C	CTTTCTTT others(17): Show CTTTCTTTCTTTCTTTCTTTCTTTT	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01169.hp2 HG01167.hp2 HG01169.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0072 a0001c0001t0010g0073 a0001c0001t0010g0072 a0001c0001t0010g0073	2	426	0.0047	24	c.100 others(43): Show c.100-17958_100-17957insAAAAGAAAGAAAGAAAGAAAGAAA	CNPY1	ENSG00000146910.14	transcript	ENST00000636446.2	protein_coding	2/4			chr7	TogoVar
CNR2_chr1_23865515_23918362	23897481	A A	ATTTTTTT others(17): Show ATTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01071.hp1 HG02965.hp2 HG01071.hp1 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0012 a0001c0001t0011 a0001c0001t0012	a0001c0001t0011g0116 a0001c0001t0012g0115 a0001c0001t0011g0116 a0001c0001t0012g0115	2	268	0.0075	24	c.-46 others(43): Show c.-46+15764_-46+15765insAAAAAAAAAAAAAAAAAAAAAAAA	CNR2	ENSG00000188822.8	transcript	ENST00000374472.5	protein_coding	1/1			chr1	TogoVar
CNRIP1_chr2_68288010_68324949	68288067	G G	GGCCAGCC others(17): Show GGCCAGCCAGCCAGCCAGCCAGCCA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0308 a0001c0002t0001g0308	1	424	0.0024	24	c.57 others(35): Show c.5771_*5794dupTGGCTGGCTGGCTGGCTGGCTGGC	CNRIP1	ENSG00000119865.9	transcript	ENST00000263655.4	protein_coding		4942		chr2	TogoVar
CNRIP1_chr2_68288010_68324949	68306124	C C	CAAAAAAA others(17): Show CAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01515.hp1 HG02165.hp2 NA18747.hp1 others(1): Show HG01515.hp1 HG02165.hp2 NA18747.hp1 NA18945.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0005 a0001c0001 a0003c0005	a0001c0001t0001 a0003c0005t0001 a0001c0001t0001 a0003c0005t0001	a0001c0001t0001g0117 a0001c0001t0001g0119 a0001c0001t0001g0123 others(1): Show a0001c0001t0001g0117 a0001c0001t0001g0119 a0001c0001t0001g0123 a0003c0005t0001g0305	4	424	0.0094	24	c.330 others(43): Show c.330+11009_330+11032dupTTTTTTTTTTTTTTTTTTTTTTTT	CNRIP1	ENSG00000119865.9	transcript	ENST00000263655.4	protein_coding	2/2			chr2	TogoVar
CNTLN_chr9_17130040_17508923	17312364	T T	TATATATA others(17): Show TATATATATATTATATATATATATA	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0004 a0004	a0004c0003 a0004c0003	a0004c0003t0004 a0004c0003t0004	a0004c0003t0004g0180 a0004c0003t0004g0180	1	218	0.0046	24	c.134 others(43): Show c.1341+3112_1341+3113insATATATATATTATATATATATATA	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	8/25			chr9	TogoVar
CNTLN_chr9_17130040_17508923	17359725	C C	CAAAAAAA others(17): Show CAAAAAAAAAAAAAAAAAAACCAAA	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG01243.hp2 HG01978.hp1 others(7): Show HG00609.hp2 HG01243.hp2 HG01978.hp1 HG02572.hp1 HG02602.hp1 NA18612.hp1 NA18940.hp2 NA18943.hp2 NA19002.hp2 NA19079.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0004 a0001c0023 others(2): Show a0001c0001 a0001c0004 a0001c0023 a0001c0027 a0003c0002	a0001c0001t0001 a0001c0004t0001 a0001c0023t0012 others(2): Show a0001c0001t0001 a0001c0004t0001 a0001c0023t0012 a0001c0027t0004 a0003c0002t0001	a0001c0001t0001g0053 a0001c0001t0001g0156 a0001c0001t0001g0202 others(7): Show a0001c0001t0001g0053 a0001c0001t0001g0156 a0001c0001t0001g0202 a0001c0004t0001g0005 a0001c0004t0001g0008 a0001c0004t0001g0009 a0001c0004t0001g0023 a0001c0023t0012g0184 a0001c0027t0004g0155 a0003c0002t0001g0067	10	218	0.0459	24	c.188 others(43): Show c.1887-6873_1887-6872insCCAAAAAAAAAAAAAAAAAAAAAA	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	12/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CNTLN_chr9_17130040_17508923	17359725	C C	CAAAAAAA others(17): Show CAAAAAAAAAAAAAAAAAACCAAAA	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG02145.hp2 HG02155.hp1 others(2): Show HG00597.hp1 HG02145.hp2 HG02155.hp1 HG04228.hp2 NA18955.hp2	a0003 a0003	a0003c0002 a0003c0002	a0003c0002t0001 a0003c0002t0001	a0003c0002t0001g0056 a0003c0002t0001g0061 a0003c0002t0001g0063 others(2): Show a0003c0002t0001g0056 a0003c0002t0001g0061 a0003c0002t0001g0063 a0003c0002t0001g0069 a0003c0002t0001g0125	5	218	0.0229	24	c.188 others(43): Show c.1887-6874_1887-6873insCCAAAAAAAAAAAAAAAAAAAAAA	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	12/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CNTLN_chr9_17130040_17508923	17359744	A A	ACAAAAAA others(17): Show ACAAAAAAAAAAAAAACAAAAAAAG	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02486.hp2 HG02723.hp2 others(4): Show HG02280.hp2 HG02486.hp2 HG02723.hp2 HG02809.hp2 HG02976.hp1 HG03098.hp2 NA18522.hp2	a0006 a0006	a0006c0007 a0006c0043 a0006c0007 a0006c0043	a0006c0007t0002 a0006c0007t0006 a0006c0007t0015 others(1): Show a0006c0007t0002 a0006c0007t0006 a0006c0007t0015 a0006c0043t0002	a0006c0007t0002g0078 a0006c0007t0002g0079 a0006c0007t0002g0086 others(4): Show a0006c0007t0002g0078 a0006c0007t0002g0079 a0006c0007t0002g0086 a0006c0007t0002g0195 a0006c0007t0006g0080 a0006c0007t0015g0083 a0006c0043t0002g0081	7	218	0.0321	24	c.188 others(43): Show c.1887-6873_1887-6872insCAAAAAAAAAAAAAACAAAAAAAG	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	12/25			chr9	TogoVar
CNTN1_chr12_40687439_41077415	40813058	T T	TCTTTCTT others(17): Show TCTTTCTTTCTTTCTTTCTTTCTTC	intron_variant intron_variant	MODIFIER	HG04115.hp1 HG04115.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0016 a0001c0001t0002g0016	1	230	0.0044	24	c.-76 others(43): Show c.-76-95296_-76-95295insTCTTTCTTTCTTTCTTTCTTCCTT	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN1_chr12_40687439_41077415	40822148	C C	CTTTTTTT others(17): Show CTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0007 a0001c0005t0007	a0001c0005t0007g0148 a0001c0005t0007g0148	1	230	0.0044	24	c.-76 others(43): Show c.-76-86208_-76-86185dupTTTTTTTTTTTTTTTTTTTTTTTT	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN1_chr12_40687439_41077415	40844069	A A	ATTTTTTT others(17): Show ATTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00438.hp2 HG00621.hp1 others(42): Show HG00408.hp2 HG00438.hp2 HG00621.hp1 HG00621.hp2 HG00733.hp2 HG00735.hp1 HG00738.hp1 HG00741.hp2 HG01069.hp2 HG01099.hp2 HG01109.hp1 HG01169.hp2 HG01256.hp1 HG01346.hp2 HG01433.hp2 HG02004.hp2 HG02071.hp1 HG02148.hp1 HG02148.hp2 HG02273.hp1 HG02280.hp1 HG02300.hp2 HG02615.hp1 HG02976.hp2 HG03516.hp2 HG03654.hp1 HG03927.hp2 HG04115.hp1 HG04115.hp2 NA18950.hp2 NA18959.hp2 NA18961.hp2 NA18964.hp1 NA18970.hp2 NA18972.hp1 NA18973.hp1 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18989.hp1 NA18989.hp2 NA19011.hp2 NA19065.hp1 NA19066.hp1 NA19091.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0006 a0001c0013 a0004c0011	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(12): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0010 a0001c0001t0024 a0001c0002t0001 a0001c0002t0003 a0001c0002t0023 a0001c0003t0005 a0001c0003t0020 a0001c0006t0006 a0001c0013t0001 a0004c0011t0001	a0001c0001t0001g0037 a0001c0001t0001g0077 a0001c0001t0001g0079 others(42): Show a0001c0001t0001g0037 a0001c0001t0001g0077 a0001c0001t0001g0079 a0001c0001t0001g0107 a0001c0001t0001g0160 a0001c0001t0001g0201 a0001c0001t0001g0228 a0001c0001t0002g0016 a0001c0001t0002g0100 a0001c0001t0002g0158 a0001c0001t0002g0220 a0001c0001t0004g0029 a0001c0001t0004g0086 a0001c0001t0004g0134 a0001c0001t0004g0179 a0001c0001t0004g0216 a0001c0001t0005g0135 a0001c0001t0006g0106 a0001c0001t0010g0202 a0001c0001t0024g0167 a0001c0002t0001g0014 a0001c0002t0001g0035 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0047 a0001c0002t0001g0068 a0001c0002t0001g0102 a0001c0002t0001g0109 a0001c0002t0001g0129 a0001c0002t0001g0132 a0001c0002t0001g0142 a0001c0002t0001g0147 a0001c0002t0001g0149 a0001c0002t0001g0194 a0001c0002t0001g0195 a0001c0002t0001g0215 a0001c0002t0003g0075 a0001c0002t0023g0144 a0001c0003t0005g0082 a0001c0003t0005g0193 a0001c0003t0020g0165 a0001c0006t0006g0017 a0001c0006t0006g0051 a0001c0013t0001g0050 a0004c0011t0001g0097	45	230	0.1957	24	c.-76 others(43): Show c.-76-64272_-76-64271insTTTTTTTTTTTTTTTTTTTTTTTT	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN1_chr12_40687439_41077415	40863926	T T	TCCTTCCT others(17): Show TCCTTCCTCCCTCCCTCCCTCCCTC	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0007 a0001c0004t0007	a0001c0004t0007g0214 a0001c0004t0007g0214	1	230	0.0044	24	c.-76 others(43): Show c.-76-44428_-76-44427insTCCTCCCTCCCTCCCTCCCTCCCT	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN1_chr12_40687439_41077415	40863926	T T	TCCTTCCT others(17): Show TCCTTCCTTCCTCCCTCCCTCCCTC	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02886.hp1 HG02717.hp2 HG02886.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0007 a0001c0001 a0002c0007	a0001c0001t0001 a0002c0007t0008 a0001c0001t0001 a0002c0007t0008	a0001c0001t0001g0230 a0002c0007t0008g0009 a0001c0001t0001g0230 a0002c0007t0008g0009	2	230	0.0087	24	c.-76 others(43): Show c.-76-44428_-76-44427insTCCTTCCTCCCTCCCTCCCTCCCT	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN1_chr12_40687439_41077415	40924881	C C	CATATATA others(17): Show CATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02027.hp1 NA19240.hp1 HG02027.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0015 a0001c0001t0002 a0001c0001t0015	a0001c0001t0002g0159 a0001c0001t0015g0219 a0001c0001t0002g0159 a0001c0001t0015g0219	2	230	0.0087	24	c.496 others(39): Show c.496+246_496+247insTATATATATATATATATATATATA	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	6/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN1_chr12_40687439_41077415	41075740	A A	AGGAAGGA others(17): Show AGGAAGGAAGGAAGGAAGGAAGGAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02273.hp2 HG02273.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0115 a0001c0001t0004g0115	1	230	0.0044	24	c.57 others(35): Show c.5705_*5706insGGAAGGAAGGAAGGAAGGAAGGAG	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding		3326		chr12	TogoVar
CNTN3_chr3_74257568_74619659	74366780	G G	GTATATAT others(17): Show GTATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA20905.hp1 NA20905.hp1	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0005 a0002c0005t0005	a0002c0005t0005g0158 a0002c0005t0005g0158	1	174	0.0058	24	c.947 others(41): Show c.947-1102_947-1079dupTATATATATATATATATATATATA	CNTN3	ENSG00000113805.9	transcript	ENST00000263665.7	protein_coding	8/22			chr3	TogoVar
CNTN3_chr3_74257568_74619659	74558982	C C	CAATAATA others(17): Show CAATAATAATAATAATAATAATAAT	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG02559.hp1 HG02735.hp1 others(4): Show HG01081.hp1 HG02559.hp1 HG02735.hp1 HG02922.hp2 HG02965.hp1 HG03041.hp2 HG03669.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0001c0006 others(1): Show a0001c0001 a0001c0002 a0001c0006 a0003c0003	a0001c0001t0015 a0001c0002t0002 a0001c0002t0005 others(4): Show a0001c0001t0015 a0001c0002t0002 a0001c0002t0005 a0001c0006t0001 a0001c0006t0006 a0003c0003t0002 a0003c0003t0007	a0001c0001t0015g0014 a0001c0002t0002g0021 a0001c0002t0005g0162 others(4): Show a0001c0001t0015g0014 a0001c0002t0002g0021 a0001c0002t0005g0162 a0001c0006t0001g0142 a0001c0006t0006g0159 a0003c0003t0002g0078 a0003c0003t0007g0020	7	174	0.0402	24	c.-80 others(43): Show c.-80-37814_-80-37791dupATTATTATTATTATTATTATTATT	CNTN3	ENSG00000113805.9	transcript	ENST00000263665.7	protein_coding	1/22			chr3	TogoVar
CNTN4_chr3_2093866_3062959	2340710	T T	TATATATA others(17): Show TATATATATATATATATAGAGAGAG	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG02818.hp2 HG00639.hp1 HG02818.hp2	a0001 a0001	a0001c0003 a0001c0013 a0001c0003 a0001c0013	a0001c0003t0001 a0001c0013t0007 a0001c0003t0001 a0001c0013t0007	a0001c0003t0001g0045 a0001c0013t0007g0056 a0001c0003t0001g0045 a0001c0013t0007g0056	2	116	0.0172	24	c.-89 others(41): Show c.-89+1478_-89+1479insTATATATATATATATAGAGAGAGA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	3/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2481033	T T	TTTTCTTT others(17): Show TTTTCTTTCTTTCTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG02132.hp1 HG02559.hp1 HG02717.hp2 others(4): Show HG02132.hp1 HG02559.hp1 HG02717.hp2 HG02897.hp2 HG03486.hp1 HG03831.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0005 others(2): Show a0001c0001 a0001c0004 a0001c0005 a0001c0021 a0001c0023	a0001c0001t0001 a0001c0001t0003 a0001c0001t0008 others(4): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0008 a0001c0004t0002 a0001c0005t0001 a0001c0021t0002 a0001c0023t0004	a0001c0001t0001g0012 a0001c0001t0003g0006 a0001c0001t0008g0043 others(4): Show a0001c0001t0001g0012 a0001c0001t0003g0006 a0001c0001t0008g0043 a0001c0004t0002g0022 a0001c0005t0001g0104 a0001c0021t0002g0025 a0001c0023t0004g0041	7	116	0.0603	24	c.-88 others(43): Show c.-88-90377_-88-90354dupTTCTTTCTTTCTTTCTTTCTTTCT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	3/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2481055	T T	TTCTTTCT others(17): Show TTCTTTCTTTCTTTCTTTCTTTCTC	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03239.hp2 HG03540.hp1 HG03041.hp1 HG03239.hp2 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0005 a0001c0002t0003 a0001c0001t0001 a0001c0001t0005 a0001c0002t0003	a0001c0001t0001g0033 a0001c0001t0005g0115 a0001c0002t0003g0024 a0001c0001t0001g0033 a0001c0001t0005g0115 a0001c0002t0003g0024	3	116	0.0259	24	c.-88 others(43): Show c.-88-90354_-88-90353insTTCTTTCTTTCTTTCTCTCTTTCT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	3/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2534819	A A	ATGCTGCT others(17): Show ATGCTGCTGCTGCTGCTGCTGCTGC	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00735.hp1 HG01243.hp2 others(9): Show HG00140.hp1 HG00735.hp1 HG01243.hp2 HG01256.hp2 HG01978.hp2 HG02647.hp1 HG02683.hp2 HG02809.hp1 HG02886.hp1 HG02965.hp1 HG03239.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0021	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0002t0002 a0001c0002t0007 a0001c0003t0001 a0001c0003t0002 a0001c0004t0001 a0001c0004t0002 a0001c0005t0009 a0001c0021t0002	a0001c0001t0001g0059 a0001c0001t0001g0099 a0001c0001t0002g0055 others(9): Show a0001c0001t0001g0059 a0001c0001t0001g0099 a0001c0001t0002g0055 a0001c0001t0003g0058 a0001c0002t0002g0102 a0001c0002t0007g0080 a0001c0003t0001g0094 a0001c0003t0002g0073 a0001c0004t0001g0036 a0001c0004t0002g0064 a0001c0005t0009g0091 a0001c0021t0002g0025	12	116	0.1035	24	c.-88 others(43): Show c.-88-36580_-88-36579insCTGCTGCTGCTGCTGCTGCTGCTG	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	3/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2607610	C C	CCACACAC others(17): Show CCACACACACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG01169.hp1 HG01243.hp2 HG01257.hp2 others(7): Show HG01169.hp1 HG01243.hp2 HG01257.hp2 HG01258.hp1 HG01891.hp1 HG02258.hp1 HG02451.hp1 HG02559.hp1 HG02622.hp1 HG04184.hp1	a0001 a0002 a0009 a0001 a0002 a0009	a0001c0001 a0001c0002 a0001c0003 others(5): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0002c0014 a0009c0027	a0001c0001t0005 a0001c0002t0001 a0001c0002t0002 others(7): Show a0001c0001t0005 a0001c0002t0001 a0001c0002t0002 a0001c0003t0003 a0001c0004t0001 a0001c0005t0001 a0001c0005t0006 a0001c0006t0002 a0002c0014t0001 a0009c0027t0001	a0001c0001t0005g0098 a0001c0002t0001g0029 a0001c0002t0002g0102 others(7): Show a0001c0001t0005g0098 a0001c0002t0001g0029 a0001c0002t0002g0102 a0001c0003t0003g0070 a0001c0004t0001g0097 a0001c0005t0001g0104 a0001c0005t0006g0010 a0001c0006t0002g0026 a0002c0014t0001g0016 a0009c0027t0001g0007	10	116	0.0862	24	c.55+ others(41): Show c.55+36068_55+36069insCACACACACACACACACACACACA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	4/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2798365	A A	ATATCTAT others(17): Show ATATCTATCTACCTATCTATCTATC	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00642.hp2 HG01175.hp1 others(1): Show HG00639.hp2 HG00642.hp2 HG01175.hp1 HG03540.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0010 a0001c0002 a0001c0003 a0001c0010	a0001c0002t0003 a0001c0003t0002 a0001c0010t0003 a0001c0002t0003 a0001c0003t0002 a0001c0010t0003	a0001c0002t0003g0024 a0001c0003t0002g0061 a0001c0003t0002g0107 others(1): Show a0001c0002t0003g0024 a0001c0003t0002g0061 a0001c0003t0002g0107 a0001c0010t0003g0077	4	116	0.0345	24	c.359 others(43): Show c.359-21121_359-21120insTATCTATCTACCTATCTATCTATC	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	6/24			chr3	TogoVar
CNTN4_chr3_2093866_3062959	2798365	A A	ATATCTAT others(17): Show ATATCTATCTATCTATCTATCTATC	intron_variant intron_variant	MODIFIER	HG01169.hp2 HG01261.hp1 HG01884.hp2 others(12): Show HG01169.hp2 HG01261.hp1 HG01884.hp2 HG01978.hp2 HG02074.hp2 HG02165.hp2 HG02559.hp2 HG02647.hp2 HG02818.hp2 HG02965.hp2 HG03239.hp1 HG03453.hp1 HG03654.hp1 NA19043.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(6): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0007 a0001c0010 a0001c0013	a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 others(12): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 a0001c0002t0001 a0001c0002t0012 a0001c0003t0001 a0001c0003t0002 a0001c0003t0003 a0001c0003t0011 a0001c0004t0002 a0001c0005t0001 a0001c0006t0002 a0001c0007t0016 a0001c0010t0003 a0001c0013t0007	a0001c0001t0001g0049 a0001c0001t0002g0086 a0001c0001t0009g0052 others(12): Show a0001c0001t0001g0049 a0001c0001t0002g0086 a0001c0001t0009g0052 a0001c0002t0001g0027 a0001c0002t0012g0013 a0001c0003t0001g0037 a0001c0003t0002g0073 a0001c0003t0003g0015 a0001c0003t0011g0113 a0001c0004t0002g0064 a0001c0005t0001g0092 a0001c0006t0002g0051 a0001c0007t0016g0105 a0001c0010t0003g0011 a0001c0013t0007g0056	15	116	0.1293	24	c.359 others(43): Show c.359-21121_359-21120insTATCTATCTATCTATCTATCTATC	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	6/24			chr3	TogoVar
CNTN4_chr3_2093866_3062959	2798375	A A	ACCTATCT others(17): Show ACCTATCTATCTATCTATCTATCTT	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0001	a0001c0005t0001g0104 a0001c0005t0001g0104	1	116	0.0086	24	c.359 others(43): Show c.359-21111_359-21110insCCTATCTATCTATCTATCTATCTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	6/24			chr3	TogoVar

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