Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	status	chr	external
CNTN4_chr3_2093866_3062959	2798397	C C	CTATCTAT others(17): Show CTATCTATCTATCTATCTATCTATA	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0007 a0001c0002t0007	a0001c0002t0007g0112 a0001c0002t0007g0112	1	116	0.0086	24	c.359 others(43): Show c.359-21076_359-21075insATCTATCTATATATCTATCTATCT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	6/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2815873	C C	CATATATA others(17): Show CATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG03041.hp2 HG02886.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0002 a0001c0005t0010 a0001c0001t0002 a0001c0005t0010	a0001c0001t0002g0030 a0001c0005t0010g0001 a0001c0001t0002g0030 a0001c0005t0010g0001	2	116	0.0172	24	c.359 others(41): Show c.359-3595_359-3594insATATATATATATATATATATATAT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	6/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2864740	C C	CAAAAAAA others(17): Show CAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG02818.hp1	a0002 a0002	a0002c0017 a0002c0017	a0002c0017t0008 a0002c0017t0008	a0002c0017t0008g0067 a0002c0017t0008g0067	1	116	0.0086	24	c.455 others(41): Show c.455-1997_455-1996insAAAAAAAAAAAAAAAAAAAAAAAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	7/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2917332	G G	GGGAGAGG others(17): Show GGGAGAGGAAGAGGGAGACGGAGAC	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02258.hp1 HG03471.hp1 others(1): Show HG02257.hp1 HG02258.hp1 HG03471.hp1 HG06807.hp1	a0001 a0001	a0001c0005 a0001c0006 a0001c0021 others(1): Show a0001c0005 a0001c0006 a0001c0021 a0001c0022	a0001c0005t0010 a0001c0006t0002 a0001c0021t0002 others(1): Show a0001c0005t0010 a0001c0006t0002 a0001c0021t0002 a0001c0022t0003	a0001c0005t0010g0085 a0001c0006t0002g0026 a0001c0021t0002g0025 others(1): Show a0001c0005t0010g0085 a0001c0006t0002g0026 a0001c0021t0002g0025 a0001c0022t0003g0083	4	116	0.0345	24	c.120 others(43): Show c.1208-8296_1208-8295insGAGAGGAAGAGGGAGACGGAGACG	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	12/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2994613	A A	ATATATAT others(17): Show ATATATATATATATATATATATATG	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0002 a0002	a0002c0014 a0002c0014	a0002c0014t0001 a0002c0014t0001	a0002c0014t0001g0016 a0002c0014t0001g0016	1	116	0.0086	24	c.148 others(43): Show c.1486+6142_1486+6143insATATATATATATATATATATATGT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	14/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN5_chr11_99015949_100363885	99201351	T T	TTTCCTTC others(17): Show TTTCCTTCCTTCCTTCCTTCCTTCC	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0044 a0001c0001t0004g0044	1	66	0.0152	24	c.-20 others(47): Show c.-209-123987_-209-123964dupCTTCCTTCCTTCCTTCCTTCCT TC	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	1/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99408428	A A	AAAAGAAA others(17): Show AAAAGAAAGAAAGAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0029 a0001c0001t0004g0029	1	66	0.0152	24	c.-71 others(43): Show c.-71+82965_-71+82966insAAGAAAGAAAGAAAGAAAGAAAGA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99620027	A A	AAAAAAAA others(17): Show AAAAAAAAAAAAAAAAACCAAAAAG	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG01081.hp1 HG01081.hp2 others(5): Show HG00733.hp1 HG01081.hp1 HG01081.hp2 HG01243.hp1 HG02723.hp2 HG02735.hp2 NA19070.hp1 NA20300.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0005	a0001c0001 a0002c0002 a0003c0003 others(1): Show a0001c0001 a0002c0002 a0003c0003 a0005c0005	a0001c0001t0004 a0001c0001t0005 a0001c0001t0009 others(5): Show a0001c0001t0004 a0001c0001t0005 a0001c0001t0009 a0001c0001t0010 a0002c0002t0001 a0002c0002t0004 a0003c0003t0002 a0005c0005t0018	a0001c0001t0004g0044 a0001c0001t0005g0048 a0001c0001t0009g0063 others(5): Show a0001c0001t0004g0044 a0001c0001t0005g0048 a0001c0001t0009g0063 a0001c0001t0010g0047 a0002c0002t0001g0003 a0002c0002t0004g0039 a0003c0003t0002g0061 a0005c0005t0018g0028	8	66	0.1212	24	c.55+ others(41): Show c.55+63768_55+63769insAAAAAACCAAAAAGAAAAAAAAAA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	3/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99727312	C C	CAAAAAAA others(17): Show CAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01099.hp1 HG02723.hp1 others(2): Show HG00738.hp2 HG01099.hp1 HG02723.hp1 NA19043.hp1 NA19070.hp1	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0011	a0001c0001 a0002c0002 a0004c0004 others(1): Show a0001c0001 a0002c0002 a0004c0004 a0011c0009	a0001c0001t0001 a0001c0001t0004 a0002c0002t0001 others(2): Show a0001c0001t0001 a0001c0001t0004 a0002c0002t0001 a0004c0004t0002 a0011c0009t0005	a0001c0001t0001g0008 a0001c0001t0004g0010 a0002c0002t0001g0003 others(2): Show a0001c0001t0001g0008 a0001c0001t0004g0010 a0002c0002t0001g0003 a0004c0004t0002g0041 a0011c0009t0005g0056	5	66	0.0758	24	c.56- others(41): Show c.56-92210_56-92209insAAAAAAAAAAAAAAAAAAAAAAAA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	3/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99941571	A A	AACACACA others(17): Show AACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG02735.hp2 NA18939.hp2 HG01081.hp2 HG02735.hp2 NA18939.hp2	a0001 a0003 a0007 a0001 a0003 a0007	a0001c0001 a0003c0003 a0007c0007 a0001c0001 a0003c0003 a0007c0007	a0001c0001t0010 a0003c0003t0002 a0007c0007t0023 a0001c0001t0010 a0003c0003t0002 a0007c0007t0023	a0001c0001t0010g0047 a0003c0003t0002g0061 a0007c0007t0023g0046 a0001c0001t0010g0047 a0003c0003t0002g0061 a0007c0007t0023g0046	3	66	0.0455	24	c.674 others(43): Show c.674-15220_674-15219insCACACACACACACACACACACACA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	7/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	100161830	T T	TACACATA others(17): Show TACACATACACACACACACACACAC	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0008 a0002c0002t0008	a0002c0002t0008g0019 a0002c0002t0008g0019	1	66	0.0152	24	c.158 others(45): Show c.1581-29291_1581-29290insTACACACACACACACACACACACA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	13/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN6_chr3_1088024_1409217	1098789	C C	CACATATA others(17): Show CACATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02280.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0001 a0001c0006t0001	a0001c0006t0001g0036 a0001c0006t0001g0036	1	232	0.0043	24	c.-83 others(41): Show c.-83+5670_-83+5671insCATATATATATATATATATATATA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	1/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1119322	C C	CGTGTGTG others(17): Show CGTGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01123.hp1 HG01361.hp2 others(13): Show HG01109.hp1 HG01123.hp1 HG01361.hp2 HG01884.hp1 HG02257.hp1 HG02258.hp2 HG02630.hp1 HG02922.hp1 HG02922.hp2 HG03130.hp2 HG03516.hp1 HG03669.hp1 HG03710.hp1 NA18906.hp2 NA19009.hp1 NA19009.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(6): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006 a0001c0007 a0001c0008 a0001c0009 a0001c0025	a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 others(6): Show a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 a0001c0005t0001 a0001c0006t0001 a0001c0007t0001 a0001c0008t0001 a0001c0009t0001 a0001c0025t0001	a0001c0001t0001g0057 a0001c0001t0001g0198 a0001c0002t0001g0094 others(13): Show a0001c0001t0001g0057 a0001c0001t0001g0198 a0001c0002t0001g0094 a0001c0002t0001g0174 a0001c0003t0001g0142 a0001c0005t0001g0157 a0001c0005t0001g0164 a0001c0005t0001g0181 a0001c0005t0001g0196 a0001c0006t0001g0185 a0001c0006t0001g0187 a0001c0007t0001g0102 a0001c0008t0001g0197 a0001c0008t0001g0214 a0001c0009t0001g0114 a0001c0025t0001g0192	16	232	0.0690	24	c.-83 others(43): Show c.-83+26210_-83+26233dupTGTGTGTGTGTGTGTGTGTGTGTG	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	1/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1132658	A A	AAAATAAA others(17): Show AAAATAAATAAATAAATAAATAAAT	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG00609.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0083 a0001c0004t0001g0083	1	232	0.0043	24	c.-82 others(43): Show c.-82-15258_-82-15235dupATAAATAAATAAATAAATAAATAA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	1/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1142968	G G	GTGTATAT others(17): Show GTGTATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG02896.hp1	a0001 a0001	a0001c0010 a0001c0010	a0001c0010t0001 a0001c0010t0001	a0001c0010t0001g0206 a0001c0010t0001g0206	1	232	0.0043	24	c.-82 others(41): Show c.-82-4958_-82-4957insGTATATATATATATATATATATAT	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	1/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1160344	G G	GTATATAT others(17): Show GTATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00639.hp2 HG00735.hp1 others(13): Show HG00140.hp2 HG00639.hp2 HG00735.hp1 HG00741.hp2 HG01256.hp2 HG01258.hp1 HG02280.hp2 HG02559.hp1 HG02615.hp1 HG03654.hp1 HG04115.hp1 NA18612.hp1 NA18906.hp2 NA18954.hp1 NA19030.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0006 others(3): Show a0001c0001 a0001c0002 a0001c0006 a0001c0007 a0001c0009 a0002c0014	a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 others(5): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 a0001c0006t0001 a0001c0007t0001 a0001c0009t0001 a0002c0014t0001	a0001c0001t0001g0024 a0001c0001t0001g0047 a0001c0001t0001g0126 others(13): Show a0001c0001t0001g0024 a0001c0001t0001g0047 a0001c0001t0001g0126 a0001c0001t0001g0131 a0001c0001t0001g0198 a0001c0002t0001g0116 a0001c0002t0001g0122 a0001c0002t0002g0021 a0001c0002t0004g0228 a0001c0006t0001g0036 a0001c0007t0001g0001 a0001c0007t0001g0014 a0001c0007t0001g0015 a0001c0007t0001g0017 a0001c0009t0001g0150 a0002c0014t0001g0232	16	232	0.0690	24	c.55+ others(41): Show c.55+12282_55+12305dupTATATATATATATATATATATATA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	2/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1160365	T T	TATATATA others(17): Show TATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02717.hp2 HG02965.hp1 others(1): Show HG02109.hp1 HG02717.hp2 HG02965.hp1 HG02970.hp1	a0001 a0006 a0001 a0006	a0001c0006 a0001c0007 a0006c0027 a0001c0006 a0001c0007 a0006c0027	a0001c0006t0001 a0001c0007t0001 a0006c0027t0001 a0001c0006t0001 a0001c0007t0001 a0006c0027t0001	a0001c0006t0001g0223 a0001c0007t0001g0134 a0001c0007t0001g0135 others(1): Show a0001c0006t0001g0223 a0001c0007t0001g0134 a0001c0007t0001g0135 a0006c0027t0001g0191	4	232	0.0172	24	c.55+ others(41): Show c.55+12305_55+12306insTATATATATATATATATATACATA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	2/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1160367	T T	TATATATA others(17): Show TATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG03516.hp1 HG02647.hp2 HG03516.hp1	a0001 a0001	a0001c0005 a0001c0006 a0001c0005 a0001c0006	a0001c0005t0001 a0001c0006t0001 a0001c0005t0001 a0001c0006t0001	a0001c0005t0001g0164 a0001c0006t0001g0037 a0001c0005t0001g0164 a0001c0006t0001g0037	2	232	0.0086	24	c.55+ others(41): Show c.55+12305_55+12306insTATATATATATATATATATATACA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	2/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1245225	T T	TAACATAT others(17): Show TAACATATATATATATATATATAAC	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0001	a0001c0005t0001g0182 a0001c0005t0001g0182	1	232	0.0043	24	c.358 others(43): Show c.358+17233_358+17234insACATATATATATATATATATAACA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	4/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1245242	A A	ATATATAT others(17): Show ATATATATATAACATATATATATAT	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0001 a0001c0006t0001	a0001c0006t0001g0210 a0001c0006t0001g0210	1	232	0.0043	24	c.358 others(43): Show c.358+17249_358+17250insTATATATATAACATATATATATAT	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	4/22		chr3	TogoVar
CNTN6_chr3_1088024_1409217	1332495	A A	AAAGGAAG others(17): Show AAAGGAAGGAAGGAAGGAAGGAAGG	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0228 a0001c0002t0004g0228	1	232	0.0043	24	c.136 others(43): Show c.1364+2574_1364+2597dupAGGAAGGAAGGAAGGAAGGAAGGA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	11/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTNAP2_chr7_146111801_148425998	146231015	A A	AAAATAAA others(17): Show AAAATAAATAAATAAATAAATAAAT	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02897.hp1 HG02922.hp2 others(2): Show HG02486.hp2 HG02897.hp1 HG02922.hp2 HG03098.hp2 HG03540.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0004 a0001c0002 a0001c0003 a0001c0004	a0001c0002t0001 a0001c0002t0010 a0001c0003t0011 others(1): Show a0001c0002t0001 a0001c0002t0010 a0001c0003t0011 a0001c0004t0005	a0001c0002t0001g0008 a0001c0002t0001g0021 a0001c0002t0010g0002 others(2): Show a0001c0002t0001g0008 a0001c0002t0001g0021 a0001c0002t0010g0002 a0001c0003t0011g0023 a0001c0004t0005g0004	5	40	0.1250	24	c.97+ others(43): Show c.97+114046_97+114069dupTAAATAAATAAATAAATAAATAAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146486046	C C	CTTTTTTT others(17): Show CTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG02922.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0034 a0001c0001t0012g0034	1	40	0.0250	24	c.98- others(43): Show c.98-288212_98-288189dupTTTTTTTTTTTTTTTTTTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146665783	T T	TAAAAAAA others(17): Show TAAAAAAACAAAAAAAAAAAAAACA	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0001 a0001	a0001c0012 a0001c0012	a0001c0012t0004 a0001c0012t0004	a0001c0012t0004g0026 a0001c0012t0004g0026	1	40	0.0250	24	c.98- others(43): Show c.98-108481_98-108480insCAAAAAAAAAAAAAACAAAAAAAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146721060	T T	TATATTAT others(17): Show TATATTATATATATACTCTATATTC	intron_variant intron_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0004	a0001c0003t0004g0029 a0001c0003t0004g0029	1	40	0.0250	24	c.98- others(41): Show c.98-53211_98-53210insATATTATATATATACTCTATATTC	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23		chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146721339	C C	CATTCTAT others(17): Show CATTCTATATATGTATTCTATATAT	intron_variant intron_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0004	a0001c0003t0004g0029 a0001c0003t0004g0029	1	40	0.0250	24	c.98- others(41): Show c.98-52921_98-52920insGTATTCTATATATATTCTATATAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146721391	C C	CTATATAT others(17): Show CTATATATATTCTATATATATTCTA	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01891.hp1 HG02486.hp1 others(3): Show HG00735.hp2 HG01891.hp1 HG02486.hp1 HG02976.hp2 HG03225.hp1 NA18522.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0001c0003 a0001c0009 others(3): Show a0001c0001 a0001c0003 a0001c0009 a0001c0013 a0001c0019 a0004c0014	a0001c0001t0007 a0001c0003t0020 a0001c0009t0019 others(3): Show a0001c0001t0007 a0001c0003t0020 a0001c0009t0019 a0001c0013t0003 a0001c0019t0006 a0004c0014t0021	a0001c0001t0007g0020 a0001c0003t0020g0017 a0001c0009t0019g0027 others(3): Show a0001c0001t0007g0020 a0001c0003t0020g0017 a0001c0009t0019g0027 a0001c0013t0003g0039 a0001c0019t0006g0015 a0004c0014t0021g0022	6	40	0.1500	24	c.98- others(41): Show c.98-52874_98-52873insTATTCTATATATATTCTATATATA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146721529	C C	CTATATAC others(17): Show CTATATACATTCTATATATATTCTA	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02896.hp1 HG02922.hp1 HG01891.hp2 HG02896.hp1 HG02922.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0005c0020 a0001c0001 a0005c0020	a0001c0001t0006 a0001c0001t0012 a0005c0020t0005 a0001c0001t0006 a0001c0001t0012 a0005c0020t0005	a0001c0001t0006g0009 a0001c0001t0012g0034 a0005c0020t0005g0016 a0001c0001t0006g0009 a0001c0001t0012g0034 a0005c0020t0005g0016	3	40	0.0750	24	c.98- others(41): Show c.98-52737_98-52714dupTACATTCTATATATATTCTATATA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146721889	A A	ATATTTTT others(17): Show ATATTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0002 a0002	a0002c0016 a0002c0016	a0002c0016t0004 a0002c0016t0004	a0002c0016t0004g0024 a0002c0016t0004g0024	1	40	0.0250	24	c.98- others(41): Show c.98-52381_98-52380insATTTTTTTTTTTTTTTTTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146948314	G G	GAAAAATT others(17): Show GAAAAATTATTTTTGACAGAAAAAT	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02630.hp1 HG02896.hp2 others(7): Show HG02451.hp2 HG02630.hp1 HG02896.hp2 HG02897.hp2 HG03098.hp2 HG03239.hp2 HG03540.hp2 NA18522.hp2 NA19030.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0010 a0001c0012	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0001c0002t0001 a0001c0002t0002 a0001c0003t0004 a0001c0004t0003 a0001c0010t0002 a0001c0012t0004	a0001c0001t0001g0038 a0001c0001t0002g0006 a0001c0001t0007g0018 others(7): Show a0001c0001t0001g0038 a0001c0001t0002g0006 a0001c0001t0007g0018 a0001c0002t0001g0021 a0001c0002t0002g0040 a0001c0003t0004g0029 a0001c0004t0003g0035 a0001c0004t0003g0036 a0001c0010t0002g0014 a0001c0012t0004g0026	10	40	0.2500	24	c.403 others(43): Show c.403-95571_403-95570insATAAAAATTATTTTTGACAGAAAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	3/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147249604	T T	TAAAAAAA others(17): Show TAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0011 a0001c0003t0011	a0001c0003t0011g0023 a0001c0003t0011g0023	1	40	0.0250	24	c.134 others(45): Show c.1349-50516_1349-50515insAAAAAAAAAAAAAAAAAAAAAAAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	8/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147510850	C C	CATATATA others(17): Show CATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG02922.hp2 NA20129.hp1 HG02922.hp1 HG02922.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0006 a0001c0001 a0001c0004 a0001c0006	a0001c0001t0012 a0001c0004t0005 a0001c0006t0009 a0001c0001t0012 a0001c0004t0005 a0001c0006t0009	a0001c0001t0012g0034 a0001c0004t0005g0004 a0001c0006t0009g0028 a0001c0001t0012g0034 a0001c0004t0005g0004 a0001c0006t0009g0028	3	40	0.0750	24	c.177 others(45): Show c.1777+24830_1777+24831insTATATATATATATATATATATATA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	11/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147560168	C C	CAAAAAAA others(17): Show CAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02896.hp2 HG02897.hp2 others(2): Show HG02486.hp2 HG02896.hp2 HG02897.hp2 HG02922.hp2 HG03139.hp2	a0001 a0001	a0001c0003 a0001c0004 a0001c0011 a0001c0003 a0001c0004 a0001c0011	a0001c0003t0011 a0001c0004t0003 a0001c0004t0005 others(1): Show a0001c0003t0011 a0001c0004t0003 a0001c0004t0005 a0001c0011t0016	a0001c0003t0011g0023 a0001c0004t0003g0035 a0001c0004t0003g0036 others(2): Show a0001c0003t0011g0023 a0001c0004t0003g0035 a0001c0004t0003g0036 a0001c0004t0005g0004 a0001c0011t0016g0019	5	40	0.1250	24	c.177 others(43): Show c.1778-1947_1778-1946insAAAAAAAAAAAAAAAAAAAAAAAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	11/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147586529	G G	GGAAGGAA others(17): Show GGAAGGAAGGAAGGAAGGAAGGAAA	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0002 a0002	a0002c0017 a0002c0017	a0002c0017t0015 a0002c0017t0015	a0002c0017t0015g0037 a0002c0017t0015g0037	1	40	0.0250	24	c.189 others(45): Show c.1897+24289_1897+24290insAAGGAAAGAAGGAAGGAAGGAAGG	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	12/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147919459	C C	CTTTCTTT others(17): Show CTTTCTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00735.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0014 a0001c0006t0014	a0001c0006t0014g0033 a0001c0006t0014g0033	1	40	0.0250	24	c.225 others(45): Show c.2255+15741_2255+15742insCTTTTTTTTTTTTTTTTTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	14/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147975006	T T	TATACAAT others(17): Show TATACAATTTTTTGTATTACATATA	intron_variant intron_variant	MODIFIER	NA20129.hp2 NA20129.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0023 a0001c0003t0023	a0001c0003t0023g0030 a0001c0003t0023g0030	1	40	0.0250	24	c.225 others(43): Show c.2256-2836_2256-2813dupATATAATACAATTTTTTGTATTAC	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	14/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147975026	A A	ATATAATA others(17): Show ATATAATACAATTTTTTGTATTACG	intron_variant intron_variant	MODIFIER	HG03239.hp1 NA20129.hp1 HG03239.hp1 NA20129.hp1	a0001 a0003 a0001 a0003	a0001c0006 a0003c0007 a0001c0006 a0003c0007	a0001c0006t0009 a0003c0007t0017 a0001c0006t0009 a0003c0007t0017	a0001c0006t0009g0028 a0003c0007t0017g0031 a0001c0006t0009g0028 a0003c0007t0017g0031	2	40	0.0500	24	c.225 others(43): Show c.2256-2813_2256-2790dupCGTATAATACAATTTTTTGTATTA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	14/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147975049	C C	CATATAAT others(17): Show CATATAATACAATTTTTTGTATTAT	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02717.hp2 HG02886.hp2 others(1): Show HG02630.hp2 HG02717.hp2 HG02886.hp2 HG03540.hp1	a0001 a0001	a0001c0002 a0001c0005 a0001c0002 a0001c0005	a0001c0002t0002 a0001c0002t0010 a0001c0005t0008 others(1): Show a0001c0002t0002 a0001c0002t0010 a0001c0005t0008 a0001c0005t0022	a0001c0002t0002g0013 a0001c0002t0010g0002 a0001c0005t0008g0005 others(1): Show a0001c0002t0002g0013 a0001c0002t0010g0002 a0001c0005t0008g0005 a0001c0005t0022g0032	4	40	0.1000	24	c.225 others(43): Show c.2256-2813_2256-2812insATATAATACAATTTTTTGTATTAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	14/23		chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147981786	G G	GGTGTGTG others(17): Show GGTGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0018 a0001c0001t0007g0018	1	40	0.0250	24	c.238 others(43): Show c.2383+3805_2383+3828dupTGTGTGTGTGTGTGTGTGTGTGTG	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	15/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148136017	A A	AAGGAAGG others(17): Show AAGGAAGGAAGGAAGGAAGGGAGGG	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0001 a0001c0001t0018g0001	1	40	0.0250	24	c.255 others(45): Show c.2555-11471_2555-11470insAAGGAAGGAAGGAAGGGAGGGAGG	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	16/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148136017	A A	AAGGAAGG others(17): Show AAGGAAGGAAGGGAGGGAGGGAGGG	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02486.hp2 HG01891.hp2 HG02486.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0006 a0001c0003t0011 a0001c0001t0006 a0001c0003t0011	a0001c0001t0006g0009 a0001c0003t0011g0023 a0001c0001t0006g0009 a0001c0003t0011g0023	2	40	0.0500	24	c.255 others(45): Show c.2555-11471_2555-11470insAAGGAAGGGAGGGAGGGAGGGAGG	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	16/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148137675	A A	AGGAAGGA others(17): Show AGGAAGGAAGGAAGGAAGGAAGGAT	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG03540.hp1 HG02976.hp2 HG03540.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0010 a0001c0003t0020 a0001c0002t0010 a0001c0003t0020	a0001c0002t0010g0002 a0001c0003t0020g0017 a0001c0002t0010g0002 a0001c0003t0020g0017	2	40	0.0500	24	c.255 others(43): Show c.2555-9793_2555-9792insTGGAAGGAAGGAAGGAAGGAAGGA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	16/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148222495	T T	TATGAATG others(17): Show TATGAATGGATCATTCCATGAATCG	intron_variant intron_variant	MODIFIER	HG00735.hp2 NA21309.hp1 NA21309.hp2 HG00735.hp2 NA21309.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0010 a0001c0019 a0001c0001 a0001c0010 a0001c0019	a0001c0001t0018 a0001c0010t0002 a0001c0019t0006 a0001c0001t0018 a0001c0010t0002 a0001c0019t0006	a0001c0001t0018g0001 a0001c0010t0002g0014 a0001c0019t0006g0015 a0001c0001t0018g0001 a0001c0010t0002g0014 a0001c0019t0006g0015	3	40	0.0750	24	c.324 others(43): Show c.3247+5019_3247+5042dupGATGAATGGATCATTCCATGAATC	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	19/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148222543	G G	GATGAATG others(17): Show GATGAATGGATCATTCCATGAATCT	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG02451.hp1 HG02451.hp2 others(21): Show HG00735.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02630.hp1 HG02717.hp1 HG02717.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp2 HG03139.hp1 HG03139.hp2 HG03225.hp1 HG03225.hp2 HG03540.hp1 HG03540.hp2 NA18522.hp1 NA18522.hp2 NA19030.hp2 NA20129.hp1 NA20129.hp2	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0002 a0001c0003 others(12): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0008 a0001c0009 a0001c0011 a0001c0012 a0001c0013 a0001c0018 a0002c0016 a0002c0017 a0005c0020	a0001c0001t0002 a0001c0001t0007 a0001c0002t0001 others(18): Show a0001c0001t0002 a0001c0001t0007 a0001c0002t0001 a0001c0002t0010 a0001c0003t0004 a0001c0003t0011 a0001c0003t0023 a0001c0004t0003 a0001c0004t0005 a0001c0005t0008 a0001c0006t0009 a0001c0006t0014 a0001c0008t0001 a0001c0009t0019 a0001c0011t0016 a0001c0012t0004 a0001c0013t0003 a0001c0018t0002 a0002c0016t0004 a0002c0017t0015 a0005c0020t0005	a0001c0001t0002g0006 a0001c0001t0007g0018 a0001c0001t0007g0020 others(21): Show a0001c0001t0002g0006 a0001c0001t0007g0018 a0001c0001t0007g0020 a0001c0002t0001g0007 a0001c0002t0001g0008 a0001c0002t0010g0002 a0001c0003t0004g0029 a0001c0003t0011g0023 a0001c0003t0023g0030 a0001c0004t0003g0035 a0001c0004t0003g0036 a0001c0004t0005g0004 a0001c0005t0008g0005 a0001c0006t0009g0028 a0001c0006t0014g0033 a0001c0008t0001g0025 a0001c0009t0019g0027 a0001c0011t0016g0019 a0001c0012t0004g0026 a0001c0013t0003g0039 a0001c0018t0002g0012 a0002c0016t0004g0024 a0002c0017t0015g0037 a0005c0020t0005g0016	24	40	0.6000	24	c.324 others(43): Show c.3247+5038_3247+5061dupGAATCTATGAATGGATCATTCCAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	19/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148253055	T T	TAGATAGA others(17): Show TAGATAGACAGATGATAGATAGATA	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0001 a0001c0008t0001	a0001c0008t0001g0025 a0001c0008t0001g0025	1	40	0.0250	24	c.338 others(45): Show c.3382-13978_3382-13977insAGATAGACAGATGATAGATAGATA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	20/23		chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148297187	A A	AGGAAGGA others(17): Show AGGAAGGAAGGAAGGAAGGAAGGAG	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0013 a0001c0002t0002g0013	1	40	0.0250	24	c.347 others(45): Show c.3475+30081_3475+30082insGGAGGGAAGGAAGGAAGGAAGGAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	21/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP3B_chr9_41885536_42134426	41934100	C C	CATATATA others(17): Show CATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01175.hp1 HG01175.hp2 others(1): Show HG00642.hp2 HG01175.hp1 HG01175.hp2 NA19090.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0004 a0001c0001 a0004c0004	a0001c0001t0002 a0001c0001t0017 a0004c0004t0005 a0001c0001t0002 a0001c0001t0017 a0004c0004t0005	a0001c0001t0002g0022 a0001c0001t0017g0012 a0004c0004t0005g0032 others(1): Show a0001c0001t0002g0022 a0001c0001t0017g0012 a0004c0004t0005g0032 a0004c0004t0005g0034	4	108	0.0370	24	c.223 others(43): Show c.2237+4143_2237+4144insATATATATATATATATATATATAT	CNTNAP3B	ENSG00000154529.15	transcript	ENST00000377561.7	protein_coding	14/23		chr9	TogoVar
CNTNAP3B_chr9_41885536_42134426	41934122	T T	TATATATA others(17): Show TATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0007 a0007	a0007c0009 a0007c0009	a0007c0009t0025 a0007c0009t0025	a0007c0009t0025g0037 a0007c0009t0025g0037	1	108	0.0093	24	c.223 others(43): Show c.2237+4121_2237+4122insGTATATATATATATATATATATAT	CNTNAP3B	ENSG00000154529.15	transcript	ENST00000377561.7	protein_coding	14/23		chr9	TogoVar
CNTNAP3B_chr9_41885536_42134426	41956387	A A	AAATAATA others(17): Show AAATAATAATAATAATAATAATAAT	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG02717.hp1 NA18968.hp1 HG01175.hp1 HG02717.hp1 NA18968.hp1	a0001 a0001	a0001c0001 a0001c0012 a0001c0042 a0001c0001 a0001c0012 a0001c0042	a0001c0001t0002 a0001c0012t0002 a0001c0042t0013 a0001c0001t0002 a0001c0012t0002 a0001c0042t0013	a0001c0001t0002g0022 a0001c0012t0002g0007 a0001c0042t0013g0001 a0001c0001t0002g0022 a0001c0012t0002g0007 a0001c0042t0013g0001	3	108	0.0278	24	c.187 others(43): Show c.1877-3002_1877-3001insATTATTATTATTATTATTATTATT	CNTNAP3B	ENSG00000154529.15	transcript	ENST00000377561.7	protein_coding	12/23		chr9	TogoVar
CNTNAP3B_chr9_41885536_42134426	42030750	C C	CAGAGAGA others(17): Show CAGAGAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG01981.hp2 HG02083.hp2 HG02273.hp1 others(1): Show HG01981.hp2 HG02083.hp2 HG02273.hp1 NA18974.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0041 a0002c0002t0001g0045 a0002c0002t0001g0052 others(1): Show a0002c0002t0001g0041 a0002c0002t0001g0045 a0002c0002t0001g0052 a0002c0002t0001g0059	4	108	0.0370	24	c.391 others(43): Show c.391-17249_391-17226dupCTCTCTCTCTCTCTCTCTCTCTCT	CNTNAP3B	ENSG00000154529.15	transcript	ENST00000377561.7	protein_coding	3/23		chr9	TogoVar

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