Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
RAB2A_chr8_60511987_60628644	60598937	C C	CAAAAAAA others(18): Show CAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0327 a0001c0001t0004g0327	1	358	0.0028	25	c.474 others(42): Show c.474+6973_474+6997dupAAAAAAAAAAAAAAAAAAAAAAAAA	RAB2A	ENSG00000104388.15	transcript	ENST00000262646.12	protein_coding	6/7		INFO_REALIGN_3_PRIME	chr8	TogoVar
RAB2B_chr14_21454020_21481959	21454162	A A	AAAAAGAA others(18): Show AAAAAGAAAAGAAAAGAAAAGAAAAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01346.hp2 HG02258.hp2 NA18997.hp2 others(1): Show HG01346.hp2 HG02258.hp2 NA18997.hp2 NA19085.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0001 a0001c0001t0002 a0001c0001t0006	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0002g0026 others(1): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0002g0026 a0001c0001t0006g0012	4	412	0.0097	25	c.70 others(36): Show c.7009_*7033dupCTTTTCTTTTCTTTTCTTTTCTTTT	RAB2B	ENSG00000129472.15	transcript	ENST00000397762.6	protein_coding		4857		chr14	TogoVar
RAB31_chr18_9703301_9867551	9719298	A A	ATATATAT others(18): Show ATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19083.hp1 NA19083.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0026 a0001c0001t0026	a0001c0001t0026g0100 a0001c0001t0026g0100	1	322	0.0031	25	c.39+ others(42): Show c.39+10854_39+10855insTATATATATATATATATATATATAT	RAB31	ENSG00000168461.13	transcript	ENST00000578921.6	protein_coding	1/6			chr18	TogoVar
RAB35_chr12_120090099_120121753	120110290	A A	ATTTTTTT others(18): Show ATTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG02109.hp1 HG02145.hp2 others(7): Show HG00642.hp2 HG02109.hp1 HG02145.hp2 HG02886.hp2 HG03453.hp1 HG03579.hp1 HG03710.hp1 HG03927.hp2 NA19043.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0012 a0001c0001t0003g0046 a0001c0001t0003g0048 others(6): Show a0001c0001t0003g0012 a0001c0001t0003g0046 a0001c0001t0003g0048 a0001c0001t0003g0049 a0001c0001t0003g0050 a0001c0001t0003g0051 a0001c0001t0003g0052 a0001c0001t0003g0156 a0001c0001t0003g0270	10	414	0.0242	25	c.53- others(40): Show c.53-1824_53-1823insAAAAAAAAAAAAAAAAAAAAAAAAA	RAB35	ENSG00000111737.12	transcript	ENST00000229340.10	protein_coding	1/5			chr12	TogoVar
RAB3C_chr5_58578075_58864394	58597079	A A	ATATAATA others(18): Show ATATAATACATTATATTTTATATAAT	intron_variant intron_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0133 a0001c0001t0011g0133	1	220	0.0046	25	c.24+ others(42): Show c.24+13847_24+13848insTATAATACATTATATTTTATATAAT	RAB3C	ENSG00000152932.8	transcript	ENST00000282878.6	protein_coding	1/4			chr5	TogoVar
RAB3C_chr5_58578075_58864394	58797368	A A	ATATATAT others(18): Show ATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0212 a0001c0001t0011g0212	1	220	0.0046	25	c.372 others(44): Show c.372-27670_372-27669insTATATATATATATATATATATATAT	RAB3C	ENSG00000152932.8	transcript	ENST00000282878.6	protein_coding	3/4			chr5	TogoVar
RAB40B_chr17_82649973_82703698	82678879	G G	GTTTTTTT others(18): Show GTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG00733.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0044 a0001c0001t0044	a0001c0001t0044g0065 a0001c0001t0044g0065	1	338	0.0030	25	c.143 others(44): Show c.143-14324_143-14323insAAAAAAAAAAAAAAAAAAAAAAAAA	RAB40B	ENSG00000141542.11	transcript	ENST00000571995.6	protein_coding	1/5			chr17	TogoVar
RAB40C_chr16_585066_634268	601815	T T	TAAAAAAA others(18): Show TAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01993.hp1 HG01993.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0301 a0001c0001t0002g0301	1	350	0.0029	25	c.142 others(44): Show c.142+11388_142+11412dupAAAAAAAAAAAAAAAAAAAAAAAAA	RAB40C	ENSG00000197562.10	transcript	ENST00000248139.8	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr16	TogoVar
RAB5B_chr12_55969078_56001683	55996003	A A	ATATATAT others(18): Show ATATATATATATTTTTTTTTTTTTTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0087 a0001c0001t0087	a0001c0001t0087g0102 a0001c0001t0087g0102	1	382	0.0026	25	c.37 others(36): Show c.3792_*3793insATATATATATTTTTTTTTTTTTTTT	RAB5B	ENSG00000111540.16	transcript	ENST00000360299.10	protein_coding	6/6	3793	INFO_REALIGN_3_PRIME	chr12	TogoVar
RAB6A_chr11_73670638_73766074	73685588	G G	GAAAGTCT others(18): Show GAAAGTCTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG01361.hp1 NA20905.hp2 HG00140.hp2 HG01361.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0002 a0001c0001t0003	a0001c0001t0002g0068 a0001c0001t0002g0075 a0001c0001t0003g0024 a0001c0001t0002g0068 a0001c0001t0002g0075 a0001c0001t0003g0024	3	354	0.0085	25	c.496 others(42): Show c.496-5869_496-5868insAAAAAAAAAAAAAAAAAAAGACTTT	RAB6A	ENSG00000175582.20	transcript	ENST00000336083.8	protein_coding	6/7			chr11	TogoVar
RAB6A_chr11_73670638_73766074	73739280	A A	ATACATAT others(18): Show ATACATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG02886.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0327 a0001c0001t0002g0327	1	354	0.0028	25	c.71- others(40): Show c.71-8458_71-8457insATATATATATATATATATATATGTA	RAB6A	ENSG00000175582.20	transcript	ENST00000336083.8	protein_coding	1/7			chr11	TogoVar
RAB6A_chr11_73670638_73766074	73739282	A A	ATATATAT others(18): Show ATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0301 a0001c0001t0004g0301	1	354	0.0028	25	c.71- others(40): Show c.71-8460_71-8459insATATATATATATATATATATATATA	RAB6A	ENSG00000175582.20	transcript	ENST00000336083.8	protein_coding	1/7			chr11	TogoVar
RAB6A_chr11_73670638_73766074	73739284	A A	AAAAAAAA others(18): Show AAAAAAAAAAAAATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01167.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0323 a0001c0001t0005g0323	1	354	0.0028	25	c.71- others(40): Show c.71-8462_71-8461insATATATATATATATTTTTTTTTTTT	RAB6A	ENSG00000175582.20	transcript	ENST00000336083.8	protein_coding	1/7			chr11	TogoVar
RAB6A_chr11_73670638_73766074	73739284	A A	AAAAAAAA others(18): Show AAAAAAAAAAATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG01516.hp2 HG01261.hp1 HG01516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0311 a0001c0001t0005g0325 a0001c0001t0005g0311 a0001c0001t0005g0325	2	354	0.0057	25	c.71- others(40): Show c.71-8462_71-8461insATATATATATATATATTTTTTTTTT	RAB6A	ENSG00000175582.20	transcript	ENST00000336083.8	protein_coding	1/7			chr11	TogoVar
RAB6A_chr11_73670638_73766074	73739284	A A	AAAAAAAA others(18): Show AAAAAAAAATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18944.hp2 NA18995.hp2 NA18944.hp2 NA18995.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0262 a0001c0001t0002g0287 a0001c0001t0002g0262 a0001c0001t0002g0287	2	354	0.0057	25	c.71- others(40): Show c.71-8462_71-8461insATATATATATATATATATTTTTTTT	RAB6A	ENSG00000175582.20	transcript	ENST00000336083.8	protein_coding	1/7			chr11	TogoVar
RAB6A_chr11_73670638_73766074	73739284	A A	AAAAAAAT others(18): Show AAAAAAATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02257.hp2 NA19079.hp1 HG02257.hp2 NA19079.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0002 a0001c0001t0005	a0001c0001t0002g0280 a0001c0001t0005g0320 a0001c0001t0002g0280 a0001c0001t0005g0320	2	354	0.0057	25	c.71- others(40): Show c.71-8462_71-8461insATATATATATATATATATATTTTTT	RAB6A	ENSG00000175582.20	transcript	ENST00000336083.8	protein_coding	1/7			chr11	TogoVar
RAB6A_chr11_73670638_73766074	73739284	A A	AAAAATAT others(18): Show AAAAATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG04228.hp2 HG03579.hp1 HG04228.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0001 a0001c0001t0006	a0001c0001t0001g0160 a0001c0001t0006g0126 a0001c0001t0001g0160 a0001c0001t0006g0126	2	354	0.0057	25	c.71- others(40): Show c.71-8462_71-8461insATATATATATATATATATATATTTT	RAB6A	ENSG00000175582.20	transcript	ENST00000336083.8	protein_coding	1/7			chr11	TogoVar
RAB6A_chr11_73670638_73766074	73739284	A A	AAATATAT others(18): Show AAATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03927.hp1 HG03927.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0259 a0001c0001t0002g0259	1	354	0.0028	25	c.71- others(40): Show c.71-8462_71-8461insATATATATATATATATATATATATT	RAB6A	ENSG00000175582.20	transcript	ENST00000336083.8	protein_coding	1/7			chr11	TogoVar
RAB6A_chr11_73670638_73766074	73739284	A A	ATATATAT others(18): Show ATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19007.hp2 NA19067.hp2 NA19007.hp2 NA19067.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0177 a0001c0001t0001g0178	2	354	0.0057	25	c.71- others(40): Show c.71-8462_71-8461insATATATATATATATATATATATATA	RAB6A	ENSG00000175582.20	transcript	ENST00000336083.8	protein_coding	1/7			chr11	TogoVar
RAB7A_chr3_128721183_128819798	128795751	C C	CTTTTTTT others(18): Show CTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG01069.hp2 HG02129.hp1 others(2): Show HG00609.hp1 HG01069.hp2 HG02129.hp1 HG02293.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0001 a0001c0001t0001 a0001c0003t0001	a0001c0001t0001g0192 a0001c0001t0001g0195 a0001c0001t0001g0215 others(2): Show a0001c0001t0001g0192 a0001c0001t0001g0195 a0001c0001t0001g0215 a0001c0001t0001g0238 a0001c0003t0001g0194	5	314	0.0159	25	c.53+ others(38): Show c.53+348_53+349insTTTTTTTTTTTTTTTTTTTTTTTTT	RAB7A	ENSG00000075785.14	transcript	ENST00000265062.8	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
RAB7A_chr3_128721183_128819798	128809936	C C	CTTTTTTT others(18): Show CTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG03579.hp1 HG02572.hp1 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0013 a0001c0001t0001 a0001c0001t0013	a0001c0001t0001g0299 a0001c0001t0013g0062 a0001c0001t0001g0299 a0001c0001t0013g0062	2	314	0.0064	25	c.528 others(42): Show c.528+2271_528+2295dupTTTTTTTTTTTTTTTTTTTTTTTTT	RAB7A	ENSG00000075785.14	transcript	ENST00000265062.8	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
RABGAP1L_chr1_174154520_175000308	174364243	C C	CTTTTTTT others(18): Show CTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0213 a0001c0001t0007g0213	1	272	0.0037	25	c.146 others(44): Show c.1466-6731_1466-6707dupTTTTTTTTTTTTTTTTTTTTTTTTT	RABGAP1L	ENSG00000152061.24	transcript	ENST00000681986.1	protein_coding	11/25		INFO_REALIGN_3_PRIME	chr1	TogoVar
RABGAP1L_chr1_174154520_175000308	174707218	C C	CTGTTTTG others(18): Show CTGTTTTGTTTTGTTTTGTTTTGTTT	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG00733.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0089 a0001c0001t0002g0089	1	272	0.0037	25	c.216 others(44): Show c.2169+4974_2169+4998dupGTTTTGTTTTGTTTTGTTTTGTTTT	RABGAP1L	ENSG00000152061.24	transcript	ENST00000681986.1	protein_coding	17/25		INFO_REALIGN_3_PRIME	chr1	TogoVar
RABGAP1L_chr1_174154520_175000308	174833466	A A	ATATATAT others(18): Show ATATATATATATATATATATATACAT	intron_variant intron_variant	MODIFIER	NA18966.hp2 NA18966.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0033 a0001c0001t0001g0033	1	272	0.0037	25	c.234 others(46): Show c.2340+21508_2340+21509insTATATATATATATATATATACATT A	RABGAP1L	ENSG00000152061.24	transcript	ENST00000681986.1	protein_coding	19/25		INFO_REALIGN_3_PRIME	chr1	TogoVar
RABGAP1L_chr1_174154520_175000308	174833466	A A	ATATATAT others(18): Show ATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01261.hp2 HG02622.hp2 others(2): Show HG01192.hp1 HG01261.hp2 HG02622.hp2 HG03540.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0010 a0001c0001t0011 others(1): Show a0001c0001t0008 a0001c0001t0010 a0001c0001t0011 a0001c0001t0024	a0001c0001t0008g0100 a0001c0001t0010g0211 a0001c0001t0010g0222 others(2): Show a0001c0001t0008g0100 a0001c0001t0010g0211 a0001c0001t0010g0222 a0001c0001t0011g0215 a0001c0001t0024g0186	5	272	0.0184	25	c.234 others(46): Show c.2340+21508_2340+21509insTATATATATATATATATATATATT A	RABGAP1L	ENSG00000152061.24	transcript	ENST00000681986.1	protein_coding	19/25		INFO_REALIGN_3_PRIME	chr1	TogoVar
RABGAP1_chr9_122936020_123109866	123077610	C C	CATTGTAT others(18): Show CATTGTATTGTATTGTATTGTATTGT	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0039 a0001c0001t0039	a0001c0001t0039g0171 a0001c0001t0039g0171	1	258	0.0039	25	c.242 others(42): Show c.2424+907_2424+931dupGTATTGTATTGTATTGTATTGTATT	RABGAP1	ENSG00000011454.18	transcript	ENST00000373647.9	protein_coding	19/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
RACGAP1_chr12_49984162_50030494	49991479	A A	ATATATAT others(18): Show ATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18953.hp2 NA18953.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0187 a0001c0001t0001g0187	1	324	0.0031	25	c.171 others(42): Show c.1714+518_1714+519insATATATATATATATATATATATATA	RACGAP1	ENSG00000161800.13	transcript	ENST00000312377.10	protein_coding	15/16			chr12	TogoVar
RACK1_chr5_181231897_181248906	181241426	C C	CAAAAAAA others(18): Show CAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0086 a0001c0001t0005g0086	1	430	0.0023	25	c.429 others(38): Show c.429+65_429+66insTTTTTTTTTTTTTTTTTTTTTTTTT	RACK1	ENSG00000204628.12	transcript	ENST00000512805.6	protein_coding	3/7			chr5	TogoVar
RAD51B_chr14_67814779_68483093	68037096	T T	TCCCTCCC others(18): Show TCCCTCCCCTCCCCTCCCCTCCCCTC	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01192.hp2 HG02735.hp2 others(1): Show HG01175.hp1 HG01192.hp2 HG02735.hp2 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0061 a0001c0001t0001g0073 a0001c0001t0001g0074 others(1): Show a0001c0001t0001g0061 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0002g0011	4	84	0.0476	25	c.756 others(46): Show c.756+149916_756+149917insCCCCTCCCCTCCCCTCCCCTCCCC T	RAD51B	ENSG00000182185.19	transcript	ENST00000471583.6	protein_coding	7/10		INFO_REALIGN_3_PRIME	chr14	TogoVar
RAD51B_chr14_67814779_68483093	68272665	A A	ATTTTTTT others(18): Show ATTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03831.hp1 HG03831.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0020 a0001c0001t0001g0020	1	84	0.0119	25	c.757 others(44): Show c.757-19205_757-19181dupTTTTTTTTTTTTTTTTTTTTTTTTT	RAD51B	ENSG00000182185.19	transcript	ENST00000471583.6	protein_coding	7/10		INFO_REALIGN_3_PRIME	chr14	TogoVar
RAD51B_chr14_67814779_68483093	68331367	C C	CAAAAAAA others(18): Show CAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01981.hp1 HG01981.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0018 a0001c0001t0001g0018	1	84	0.0119	25	c.853 others(44): Show c.853+39405_853+39406insAAAAAAAAAAAAAAAAAAAAAAAAA	RAD51B	ENSG00000182185.19	transcript	ENST00000471583.6	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr14	TogoVar
RAD52_chr12_906736_954694	952995	A A	AGGGGGAA others(18): Show AGGGGGAAGGGAGGGGGTGGGGGGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp1 HG00423.hp1 HG01069.hp2 others(42): Show HG00408.hp1 HG00423.hp1 HG01069.hp2 HG01081.hp2 HG01123.hp2 HG01192.hp1 HG01255.hp1 HG01515.hp2 HG01993.hp2 HG02004.hp2 HG02071.hp2 HG02083.hp2 HG02132.hp1 HG02165.hp2 HG02300.hp1 HG02735.hp2 HG03490.hp2 HG03491.hp2 HG04228.hp1 NA18906.hp1 NA18942.hp2 NA18944.hp1 NA18945.hp1 NA18947.hp1 NA18948.hp1 NA18951.hp1 NA18959.hp2 NA18963.hp1 NA18965.hp1 NA18969.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp2 NA18986.hp2 NA18990.hp1 NA19004.hp2 NA19010.hp1 NA19055.hp1 NA19060.hp2 NA19067.hp1 NA19068.hp1 NA19070.hp1 NA19077.hp2 NA19080.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0025 a0001c0001t0047 others(6): Show a0001c0001t0002 a0001c0001t0025 a0001c0001t0047 a0001c0001t0056 a0001c0001t0057 a0001c0001t0058 a0001c0001t0059 a0001c0001t0060 a0001c0001t0061	a0001c0001t0002g0001 a0001c0001t0002g0007 a0001c0001t0002g0008 others(28): Show a0001c0001t0002g0001 a0001c0001t0002g0007 a0001c0001t0002g0008 a0001c0001t0002g0009 a0001c0001t0002g0015 a0001c0001t0002g0016 a0001c0001t0002g0017 a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0001t0002g0191 a0001c0001t0002g0193 a0001c0001t0002g0194 a0001c0001t0002g0195 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0209 a0001c0001t0002g0211 a0001c0001t0002g0212 a0001c0001t0002g0213 a0001c0001t0025g0205 a0001c0001t0025g0207 a0001c0001t0047g0070 a0001c0001t0056g0197 a0001c0001t0057g0208 a0001c0001t0058g0310 a0001c0001t0059g0214 a0001c0001t0060g0206 a0001c0001t0061g0196	45	400	0.1125	25	c.-34 others(36): Show c.-3413_-3412insCTCCCCCCACCCCCTCCCTTCCCCC	RAD52	ENSG00000002016.18	transcript	ENST00000358495.8	protein_coding		3302		chr12	TogoVar
RAD54L2_chr3_51533719_51673660	51626436	C C	CTTTTTTT others(18): Show CTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0063 a0001c0001t0063	a0001c0001t0063g0092 a0001c0001t0063g0092	1	276	0.0036	25	c.140 others(42): Show c.140-1115_140-1091dupTTTTTTTTTTTTTTTTTTTTTTTTT	RAD54L2	ENSG00000164080.14	transcript	ENST00000684192.1	protein_coding	3/22		INFO_REALIGN_3_PRIME	chr3	TogoVar
RAD9B_chr12_110497331_110538556	110507468	T T	TATATATG others(18): Show TATATATGTATTAAATATAATACATA	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG01433.hp2 HG01358.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0045 a0001c0001t0001g0094 a0001c0001t0001g0045 a0001c0001t0001g0094	2	284	0.0070	25	c.388 others(40): Show c.388+844_388+868dupATACATAATATATGTATTAAATATA	RAD9B	ENSG00000151164.19	transcript	ENST00000409300.6	protein_coding	4/10		INFO_REALIGN_3_PRIME	chr12	TogoVar
RAE1_chr20_57346255_57384202	57350857	C C	CGGGGGAC others(18): Show CGGGGGACGGGGGGCGGGGGGGGGCG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19056.hp2 NA19056.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0027 a0001c0001t0003g0027	1	342	0.0029	25	c.-57 others(34): Show c.-573_-572insGGGGGACGGGGGGCGGGGGGGGGCG	RAE1	ENSG00000101146.13	transcript	ENST00000395841.7	protein_coding		397		chr20	TogoVar
RAI1_chr17_17676458_17816453	17808414	A A	ATTATTTT others(18): Show ATTATTTTATTTTATTTTATTTTATT	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0017 a0002c0002t0002g0017	1	252	0.0040	25	c.566 others(42): Show c.5660-954_5660-930dupTATTTTATTTTATTTTATTTTATTT	RAI1	ENSG00000108557.20	transcript	ENST00000353383.6	protein_coding	4/5		INFO_REALIGN_3_PRIME	chr17	TogoVar
RALBP1_chr18_9470513_9543114	9471570	A A	AATATATG others(18): Show AATATATGATATATCACATATATGAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02451.hp1 HG03516.hp1 NA18906.hp1 HG02451.hp1 HG03516.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0014 a0001c0001t0012 a0001c0001t0014	a0001c0001t0012g0008 a0001c0001t0014g0036 a0001c0001t0012g0008 a0001c0001t0014g0036	3	362	0.0083	25	c.-41 others(36): Show c.-4177_-4176insATATATGATATATCACATATATGAT	RALBP1	ENSG00000017797.13	transcript	ENST00000383432.8	protein_coding		3942		chr18	TogoVar
RALGAPA1_chr14_35533356_35814295	35541040	A A	ATTTTTTT others(18): Show ATTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19074.hp2 NA19074.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0239 a0001c0003t0001g0239	1	272	0.0037	25	c.24 others(42): Show c.24-1351_*24-1350insAAAAAAAAAAAAAAAAAAAAAAAAA	RALGAPA1	ENSG00000174373.17	transcript	ENST00000680220.1	protein_coding	41/41			chr14	TogoVar
RALGAPA1_chr14_35533356_35814295	35811776	A A	AAATATAT others(18): Show AAATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02896.hp1 HG02896.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0018 a0002c0001t0001g0018	1	272	0.0037	25	c.-29 others(36): Show c.-2942_-2941insATATATATATATATATATATATATT	RALGAPA1	ENSG00000174373.17	transcript	ENST00000680220.1	protein_coding		2482		chr14	TogoVar
RALGPS1_chr9_126909782_127228166	126958140	A A	ATAAATAA others(18): Show ATAAATAAATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0021 a0001c0001t0021	a0001c0001t0021g0010 a0001c0001t0021g0010	1	276	0.0036	25	c.-65 others(42): Show c.-65-4085_-65-4084insTAAATAAATATATATATATATATAT	RALGPS1	ENSG00000136828.19	transcript	ENST00000259351.10	protein_coding	1/18			chr9	TogoVar
RALGPS1_chr9_126909782_127228166	126958142	A A	AAAAAAAT others(18): Show AAAAAAATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00423.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0088 a0002c0002t0004g0088	1	276	0.0036	25	c.-65 others(42): Show c.-65-4082_-65-4081insAAAAATATATATATATATATATATA	RALGPS1	ENSG00000136828.19	transcript	ENST00000259351.10	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr9	TogoVar
RALGPS1_chr9_126909782_127228166	127188832	T T	TTAAAAAA others(18): Show TTAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00738.hp1 HG01070.hp2 others(10): Show HG00140.hp1 HG00738.hp1 HG01070.hp2 HG01074.hp1 HG01081.hp1 HG01255.hp1 HG01433.hp2 HG01934.hp1 HG01975.hp2 HG03491.hp2 HG03927.hp2 NA19057.hp2 NA19064.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0140 a0001c0001t0001g0158 a0001c0001t0001g0174 others(10): Show a0001c0001t0001g0140 a0001c0001t0001g0158 a0001c0001t0001g0174 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0196 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0206 a0001c0001t0001g0224 a0001c0001t0001g0253 a0001c0001t0001g0259 a0001c0001t0001g0273	13	276	0.0471	25	c.911 others(42): Show c.911-6259_911-6258insTAAAAAAAAAAAAAAAAAAAAAAAA	RALGPS1	ENSG00000136828.19	transcript	ENST00000259351.10	protein_coding	11/18			chr9	TogoVar
RALGPS1_chr9_126909782_127228166	127225795	T T	TCCGCGGG others(18): Show TCCGCGGGCCCGGCTCGCCCTGGCGC	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18972.hp1 NA18972.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0221 a0001c0001t0002g0221	1	276	0.0036	25	c.70 others(36): Show c.7026_*7027insCCGCGGGCCCGGCTCGCCCTGGCGC	RALGPS1	ENSG00000136828.19	transcript	ENST00000259351.10	protein_coding		2630		chr9	TogoVar
RALGPS1_chr9_126909782_127228166	127225801	G G	GCCCGGCT others(18): Show GCCCGGCTCGCCCTGGCGCCCGCGGC	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18974.hp2 NA18974.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0082 a0001c0001t0002g0082	1	276	0.0036	25	c.70 others(36): Show c.7032_*7033insCCCGGCTCGCCCTGGCGCCCGCGGC	RALGPS1	ENSG00000136828.19	transcript	ENST00000259351.10	protein_coding		2636		chr9	TogoVar
RALYL_chr8_84178274_84926844	84223209	C C	CTCCCTTC others(18): Show CTCCCTTCCCTTCCCTTCCCTTCCCT	intron_variant intron_variant	MODIFIER	NA20300.hp1 NA21309.hp1 NA20300.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0075 a0001c0001t0002g0080 a0001c0001t0001g0075 a0001c0001t0002g0080	2	82	0.0244	25	c.-24 others(44): Show c.-24+38799_-24+38823dupCTTCCCTTCCCTTCCCTTCCCTTCC	RALYL	ENSG00000184672.12	transcript	ENST00000521268.6	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr8	TogoVar
RALYL_chr8_84178274_84926844	84288534	T T	TATCTTTT others(18): Show TATCTTTTTTCTGCATTTTTAGTTGC	intron_variant intron_variant	MODIFIER	NA20300.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0075 a0001c0001t0001g0075	1	82	0.0122	25	c.-24 others(46): Show c.-24+104138_-24+104162dupCTTTTTTCTGCATTTTTAGTTGCA T	RALYL	ENSG00000184672.12	transcript	ENST00000521268.6	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr8	TogoVar
RALYL_chr8_84178274_84926844	84331717	A A	AAAGCAGG others(18): Show AAAGCAGGTCAGTATATAATTGTCTT	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02965.hp2 HG01884.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0006 a0001c0001t0003 a0001c0001t0006	a0001c0001t0003g0058 a0001c0001t0006g0011 a0001c0001t0003g0058 a0001c0001t0006g0011	2	82	0.0244	25	c.-24 others(46): Show c.-24+147295_-24+147319dupAGCAGGTCAGTATATAATTGTCTT A	RALYL	ENSG00000184672.12	transcript	ENST00000521268.6	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr8	TogoVar
RALYL_chr8_84178274_84926844	84372886	G G	GTTTTTTT others(18): Show GTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0031 a0001c0001t0001g0031	1	82	0.0122	25	c.-23 others(46): Show c.-23-156408_-23-156384dupTTTTTTTTTTTTTTTTTTTTTTTT T	RALYL	ENSG00000184672.12	transcript	ENST00000521268.6	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr8	TogoVar
RALYL_chr8_84178274_84926844	84535602	A A	ATTATTTT others(18): Show ATTATTTTATTTTATTTTATTTTATT	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0020 a0001c0001t0005g0020	1	82	0.0122	25	c.256 others(42): Show c.256+6043_256+6067dupATTTTATTTTATTTTATTTTATTTT	RALYL	ENSG00000184672.12	transcript	ENST00000521268.6	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr8	TogoVar
RANBP10_chr16_67718070_67811560	67785731	C C	CAAAAAAA others(18): Show CAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00738.hp1 HG01934.hp2 others(11): Show HG00639.hp2 HG00738.hp1 HG01934.hp2 HG02055.hp2 HG02071.hp2 HG02615.hp1 HG02622.hp1 HG02886.hp1 HG02895.hp2 HG03486.hp1 HG03491.hp2 HG03579.hp2 NA18995.hp2 NA19060.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0013 a0001c0001t0002 a0001c0001t0013	a0001c0001t0002g0005 a0001c0001t0002g0006 a0001c0001t0002g0010 others(11): Show a0001c0001t0002g0005 a0001c0001t0002g0006 a0001c0001t0002g0010 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0018 a0001c0001t0002g0022 a0001c0001t0002g0025 a0001c0001t0002g0030 a0001c0001t0002g0032 a0001c0001t0002g0033 a0001c0001t0002g0040 a0001c0001t0002g0042 a0001c0001t0013g0034	14	152	0.0921	25	c.348 others(44): Show c.348-13646_348-13645insTTTTTTTTTTTTTTTTTTTTTTTTT	RANBP10	ENSG00000141084.12	transcript	ENST00000317506.8	protein_coding	2/13			chr16	TogoVar

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