Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
LACTB2_chr8_70632266_70674185	70669642	T T	TGTGTGTG others(18): Show TGTGTGTGTGTGTGTGTGTGTGTGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01255.hp2 HG01255.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0045 a0001c0001t0001g0045	1	256	0.0039	25	c.-52 others(34): Show c.-523_-522insCACACACACACACACACACACACAC		LACTB2	ENSG00000147592.9	transcript	ENST00000276590.5	protein_coding					458		chr8	TogoVar
LACTB_chr15_63116861_63147061	63146250	A A	ATTTTAAC others(18): Show ATTTTAACATTAAACGTTTAATGTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02145.hp1 HG02145.hp2 HG02257.hp2 others(7): Show HG02145.hp1 HG02145.hp2 HG02257.hp2 HG02280.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG03540.hp2 NA18906.hp2 NA19043.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0002 a0002c0010 a0002c0012 others(1): Show a0001c0002 a0002c0010 a0002c0012 a0003c0005	a0001c0002t0001 a0002c0010t0001 a0002c0012t0001 others(1): Show a0001c0002t0001 a0002c0010t0001 a0002c0012t0001 a0003c0005t0001	a0001c0002t0001g0013 a0002c0010t0001g0094 a0002c0012t0001g0095 others(3): Show a0001c0002t0001g0013 a0002c0010t0001g0094 a0002c0012t0001g0095 a0003c0005t0001g0013 a0003c0005t0001g0066 a0003c0005t0001g0101	10	302	0.0331	25	c.44 others(36): Show c.4445_*4446insTTTTAACATTAAACGTTTAATGTTT		LACTB	ENSG00000103642.12	transcript	ENST00000261893.9	protein_coding					4190		chr15	TogoVar
LACTB_chr15_63116861_63147061	63146250	A A	ATTTTAAC others(18): Show ATTTTAACATTAAATGTTTAATGTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp2 HG00423.hp2 HG00597.hp2 others(100): Show HG00280.hp2 HG00423.hp2 HG00597.hp2 HG00621.hp1 HG00639.hp1 HG00673.hp2 HG00733.hp1 HG00735.hp1 HG01070.hp1 HG01071.hp1 HG01167.hp2 HG01169.hp1 HG01256.hp2 HG01258.hp1 HG01358.hp2 HG01433.hp2 HG01891.hp1 HG01952.hp1 HG01975.hp1 HG01993.hp1 HG02132.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02280.hp2 HG02293.hp1 HG02300.hp2 HG02451.hp1 HG02523.hp1 HG02559.hp1 HG02622.hp2 HG02647.hp2 HG02818.hp1 HG02818.hp2 HG02896.hp1 HG02922.hp1 HG03017.hp1 HG03017.hp2 HG03098.hp2 HG03139.hp1 HG03209.hp2 HG03471.hp1 HG03491.hp1 HG03492.hp1 HG03654.hp2 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03942.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18939.hp1 NA18943.hp1 NA18946.hp2 NA18947.hp2 NA18953.hp1 NA18960.hp2 NA18961.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp1 NA18970.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp1 NA18978.hp2 NA18981.hp1 NA18983.hp2 NA18987.hp2 NA18988.hp2 NA18990.hp1 NA18992.hp1 NA18993.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp2 NA19005.hp2 NA19009.hp2 NA19012.hp2 NA19030.hp1 NA19043.hp1 NA19055.hp2 NA19057.hp2 NA19060.hp2 NA19062.hp1 NA19063.hp2 NA19064.hp1 NA19080.hp2 NA19082.hp1 NA19084.hp2 NA19086.hp2 NA19087.hp1 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20905.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0009 others(43): Show a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0009 a0001c0001t0001g0017 a0001c0001t0001g0021 a0001c0001t0001g0030 a0001c0001t0001g0032 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0063 a0001c0001t0001g0097 a0001c0001t0001g0100 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0138 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0177 a0001c0001t0001g0186 a0001c0001t0001g0187	103	395	0.2608	25	c.44 others(36): Show c.4445_*4446insTTTTAACATTAAATGTTTAATGTTT		LACTB	ENSG00000103642.12	transcript	ENST00000261893.9	protein_coding					4190		chr15	TogoVar
LAG3_chr12_6767520_6783455	6773944	C C	CACCTCAG others(18): Show CACCTCAGGGTATACATAGTGATGTT	frameshift_variant frameshift_variant	HIGH	NA18940.hp2 NA18940.hp2	a0012 a0012	a0012c0013 a0012c0013	a0012c0013t0001 a0012c0013t0001	a0012c0013t0001g0088 a0012c0013t0001g0088	1	470	0.0021	25	c.463 others(32): Show c.463_464insTATACATAGTGATGTTACCTCAGGG	p.Asp others(5): Show p.Asp155fs	LAG3	ENSG00000089692.9	transcript	ENST00000203629.3	protein_coding	3/8	797/1976	464/1578	155/525		INFO_REALIGN_3_PRIME	chr12	TogoVar
LAMA1_chr18_6936742_7122797	7021842	T T	TATTATAT others(18): Show TATTATATAATATATATTATATAATA	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0099 a0099	a0099c0208 a0099c0208	a0099c0208t0003 a0099c0208t0003	a0099c0208t0003g0126 a0099c0208t0003g0126	1	261	0.0038	25	c.270 others(44): Show c.2701+1321_2701+1322insTATTATATAATATATATTATATAAT		LAMA1	ENSG00000101680.16	transcript	ENST00000389658.4	protein_coding	19/62						chr18	TogoVar
LAMA2_chr6_128878138_129521566	129055176	T T	TTTATTAT others(18): Show TTTATTATTATTATTTATTATTATTA	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0007 a0002c0004t0007	a0002c0004t0007g0024 a0002c0004t0007g0024	1	67	0.0149	25	c.284 others(42): Show c.284-4594_284-4593insTATTATTATTATTATTATTATTATT		LAMA2	ENSG00000196569.14	transcript	ENST00000421865.3	protein_coding	2/64					INFO_REALIGN_3_PRIME	chr6	TogoVar
LAMA2_chr6_128878138_129521566	129286719	T T	TTATATTT others(18): Show TTATATTTATATAATATATATAATAA	intron_variant intron_variant	MODIFIER	HG02897.hp2 HG02970.hp1 HG02897.hp2 HG02970.hp1	a0002 a0013 a0002 a0013	a0002c0026 a0013c0028 a0002c0026 a0013c0028	a0002c0026t0002 a0013c0028t0003 a0002c0026t0002 a0013c0028t0003	a0002c0026t0002g0018 a0013c0028t0003g0010 a0002c0026t0002g0018 a0013c0028t0003g0010	2	84	0.0238	25	c.253 others(44): Show c.2538-1123_2538-1122insTTATATAATATATATAATAATATAT		LAMA2	ENSG00000196569.14	transcript	ENST00000421865.3	protein_coding	18/64					INFO_REALIGN_3_PRIME	chr6	TogoVar
LAMA2_chr6_128878138_129521566	129314398	C C	CAAAAAAA others(18): Show CAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02717.hp2 NA18973.hp2 NA19084.hp2 HG02717.hp2 NA18973.hp2 NA19084.hp2	a0006 a0016 a0022 a0006 a0016 a0022	a0006c0046 a0016c0064 a0022c0025 a0006c0046 a0016c0064 a0022c0025	a0006c0046t0001 a0016c0064t0004 a0022c0025t0001 a0006c0046t0001 a0016c0064t0004 a0022c0025t0001	a0006c0046t0001g0075 a0016c0064t0004g0073 a0022c0025t0001g0029 a0006c0046t0001g0075 a0016c0064t0004g0073 a0022c0025t0001g0029	3	21	0.1429	25	c.341 others(42): Show c.3412-236_3412-235insAAAAAAAAAAAAAAAAAAAAAAAAA		LAMA2	ENSG00000196569.14	transcript	ENST00000421865.3	protein_coding	23/64					INFO_REALIGN_3_PRIME	chr6	TogoVar
LAMA5_chr20_62304065_62372312	62317430	A A	AGAAGGTC others(18): Show AGAAGGTCTGCATCCTCTGCAGCAGT	frameshift_variant frameshift_variant	HIGH	NA18522.hp1 NA18522.hp1	a0089 a0089	a0089c0029 a0089c0029	a0089c0029t0001 a0089c0029t0001	a0089c0029t0001g0180 a0089c0029t0001g0180	1	184	0.0054	25	c.740 others(34): Show c.7401_7425dupACTGCTGCAGAGGATGCAGACCTTC	p.Ser others(6): Show p.Ser2476fs	LAMA5	ENSG00000130702.15	transcript	ENST00000252999.7	protein_coding	55/80	7492/11426	7425/11088	2475/3695			chr20	TogoVar
LAMA5_chr20_62304065_62372312	62333307	G G	GGGGAAGC others(18): Show GGGGAAGCCAGGCACAGTGGGGGTCC	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02257.hp1 NA18522.hp1 HG01243.hp1 HG02257.hp1 NA18522.hp1	a0041 a0061 a0089 a0041 a0061 a0089	a0041c0050 a0061c0049 a0089c0029 a0041c0050 a0061c0049 a0089c0029	a0041c0050t0001 a0061c0049t0001 a0089c0029t0001 a0041c0050t0001 a0061c0049t0001 a0089c0029t0001	a0041c0050t0001g0058 a0061c0049t0001g0059 a0089c0029t0001g0180 a0041c0050t0001g0058 a0061c0049t0001g0059 a0089c0029t0001g0180	3	184	0.0163	25	c.312 others(40): Show c.3128+43_3129-65dupGGACCCCCACTGTGCCTGGCTTCCC		LAMA5	ENSG00000130702.15	transcript	ENST00000252999.7	protein_coding	25/79						chr20	TogoVar
LAMA5_chr20_62304065_62372312	62334753	C C	CAGGGCTC others(18): Show CAGGGCTCAGGGCGAGGGCGAGGGCG	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01515.hp2 HG02055.hp2 others(13): Show HG00642.hp2 HG01515.hp2 HG02055.hp2 HG02071.hp1 HG02572.hp1 HG02897.hp1 HG03669.hp2 HG03688.hp2 HG04199.hp1 HG04199.hp2 NA18947.hp1 NA18970.hp1 NA19007.hp1 NA19066.hp1 NA20905.hp1 NA20905.hp2	a0001 a0002 a0004 others(5): Show a0001 a0002 a0004 a0006 a0054 a0074 a0093 a0101	a0001c0001 a0001c0005 a0001c0010 others(10): Show a0001c0001 a0001c0005 a0001c0010 a0001c0016 a0002c0003 a0002c0013 a0004c0004 a0004c0092 a0006c0012 a0054c0023 a0074c0123 a0093c0095 a0101c0044	a0001c0001t0001 a0001c0005t0001 a0001c0010t0001 others(10): Show a0001c0001t0001 a0001c0005t0001 a0001c0010t0001 a0001c0016t0001 a0002c0003t0001 a0002c0013t0001 a0004c0004t0001 a0004c0092t0001 a0006c0012t0001 a0054c0023t0001 a0074c0123t0001 a0093c0095t0001 a0101c0044t0001	a0001c0001t0001g0135 a0001c0005t0001g0114 a0001c0010t0001g0112 others(13): Show a0001c0001t0001g0135 a0001c0005t0001g0114 a0001c0010t0001g0112 a0001c0016t0001g0166 a0001c0016t0001g0168 a0002c0003t0001g0089 a0002c0013t0001g0163 a0004c0004t0001g0165 a0004c0092t0001g0098 a0006c0012t0001g0150 a0006c0012t0001g0152 a0006c0012t0001g0153 a0054c0023t0001g0009 a0074c0123t0001g0082 a0093c0095t0001g0162 a0101c0044t0001g0167	16	55	0.2909	25	c.248 others(42): Show c.2483-133_2483-132insCGCCCTCGCCCTCGCCCTGAGCCCT		LAMA5	ENSG00000130702.15	transcript	ENST00000252999.7	protein_coding	20/79						chr20	TogoVar
LAMC1_chr1_183018420_183150592	183149942	C C	CCTCTCCT others(18): Show CCTCTCCTCACACACCACACAGCCCA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02523.hp1 NA18939.hp2 HG02523.hp1 NA18939.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0027 a0001c0002t0002g0062 a0001c0002t0002g0027 a0001c0002t0002g0062	2	40	0.0500	25	c.71 others(36): Show c.7152_*7153insCTCTCCTCACACACCACACAGCCCA		LAMC1	ENSG00000135862.6	transcript	ENST00000258341.5	protein_coding					4351		chr1	TogoVar
LAMC1_chr1_183018420_183150592	183149942	C C	CCTCTCCT others(18): Show CCTCTCCTCACACACCACACAGCTCA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp1 HG00544.hp1 HG00558.hp2 others(89): Show HG00140.hp1 HG00544.hp1 HG00558.hp2 HG00609.hp1 HG00741.hp2 HG01074.hp2 HG01081.hp2 HG01123.hp2 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01192.hp2 HG01358.hp1 HG01358.hp2 HG01515.hp2 HG01516.hp1 HG01517.hp2 HG01928.hp2 HG02015.hp1 HG02027.hp1 HG02040.hp1 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp2 HG02132.hp2 HG02148.hp2 HG02155.hp2 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02559.hp1 HG02622.hp1 HG02647.hp1 HG02738.hp2 HG02809.hp1 HG02886.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03130.hp1 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03669.hp1 HG03704.hp1 HG03927.hp1 HG03942.hp1 HG04115.hp1 HG04184.hp2 NA18522.hp1 NA18906.hp1 NA18944.hp2 NA18945.hp1 NA18946.hp2 NA18950.hp1 NA18977.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18982.hp2 NA18983.hp2 NA18987.hp1 NA18988.hp2 NA18990.hp2 NA18993.hp2 NA18998.hp2 NA19000.hp1 NA19002.hp2 NA19009.hp1 NA19030.hp1 NA19043.hp1 NA19057.hp2 NA19066.hp2 NA19068.hp1 NA19068.hp2 NA19082.hp2 NA19084.hp1 NA19085.hp1 NA19090.hp1 NA19090.hp2 NA20129.hp2	a0001 a0002 a0003 others(9): Show a0001 a0002 a0003 a0004 a0005 a0006 a0008 a0009 a0010 a0012 a0014 a0019	a0001c0002 a0001c0003 a0001c0005 others(19): Show a0001c0002 a0001c0003 a0001c0005 a0001c0013 a0001c0018 a0001c0032 a0001c0034 a0002c0001 a0002c0006 a0002c0009 a0002c0012 a0003c0004 a0004c0007 a0004c0022 a0005c0010 a0006c0015 a0008c0039 a0009c0033 a0010c0029 a0012c0031 a0014c0019 a0019c0038	a0001c0002t0002 a0001c0002t0016 a0001c0002t0019 others(26): Show a0001c0002t0002 a0001c0002t0016 a0001c0002t0019 a0001c0002t0020 a0001c0003t0002 a0001c0003t0003 a0001c0003t0007 a0001c0005t0002 a0001c0005t0004 a0001c0013t0009 a0001c0018t0010 a0001c0032t0002 a0001c0034t0002 a0002c0001t0001 a0002c0006t0002 a0002c0006t0018 a0002c0009t0001 a0002c0012t0001 a0003c0004t0026 a0004c0007t0006 a0004c0022t0002 a0005c0010t0002 a0006c0015t0002 a0008c0039t0002 a0009c0033t0002 a0010c0029t0002 a0012c0031t0009 a0014c0019t0010 a0019c0038t0002	a0001c0002t0002g0002 a0001c0002t0002g0010 a0001c0002t0002g0013 others(87): Show a0001c0002t0002g0002 a0001c0002t0002g0010 a0001c0002t0002g0013 a0001c0002t0002g0023 a0001c0002t0002g0024 a0001c0002t0002g0034 a0001c0002t0002g0036 a0001c0002t0002g0037 a0001c0002t0002g0040 a0001c0002t0002g0042 a0001c0002t0002g0044 a0001c0002t0002g0052 a0001c0002t0002g0053 a0001c0002t0002g0054 a0001c0002t0002g0055 a0001c0002t0002g0056 a0001c0002t0002g0057 a0001c0002t0002g0059 a0001c0002t0002g0065 a0001c0002t0002g0066 a0001c0002t0002g0068 a0001c0002t0002g0072 a0001c0002t0002g0075 a0001c0002t0002g0076 a0001c0002t0002g0080 a0001c0002t0002g0082 a0001c0002t0002g0083 a0001c0002t0002g0084 a0001c0002t0002g0086 a0001c0002t0002g0091 a0001c0002t0002g0092 a0001c0002t0002g0093 a0001c0002t0002g0095 a0001c0002t0002g0099 a0001c0002t0002g0100 a0001c0002t0002g0101 a0001c0002t0002g0111 a0001c0002t0016g0018 a0001c0002t0019g0102 a0001c0002t0020g0025 a0001c0003t0002g0007 a0001c0003t0002g0255 a0001c0003t0002g0256 a0001c0003t0003g0249 a0001c0003t0003g0250 a0001c0003t0003g0251 a0001c0003t0003g0252 a0001c0003t0003g0253 a0001c0003t0003g0254 a0001c0003t0003g0290 a0001c0003t0007g0005 a0001c0005t0002g0026 a0001c0005t0002g0087 a0001c0005t0004g0106 a0001c0013t0009g0245 a0001c0018t0010g0138 a0001c0032t0002g0009 a0001c0034t0002g0089 a0002c0001t0001g0003 a0002c0001t0001g0117 a0002c0001t0001g0119 a0002c0001t0001g0120 a0002c0001t0001g0121 a0002c0001t0001g0123 a0002c0001t0001g0133 a0002c0001t0001g0136 a0002c0001t0001g0137 a0002c0001t0001g0181 a0002c0001t0001g0197 a0002c0006t0002g0180 a0002c0006t0002g0190 a0002c0006t0002g0196 a0002c0006t0002g0204 a0002c0006t0018g0142 a0002c0009t0001g0153 a0002c0012t0001g0130 a0003c0004t0026g0236 a0004c0007t0006g0225 a0004c0022t0002g0217 a0005c0010t0002g0060 a0005c0010t0002g0061 a0005c0010t0002g0094 a0006c0015t0002g0017 a0006c0015t0002g0019 a0008c0039t0002g0085 a0009c0033t0002g0035 a0010c0029t0002g0079 a0012c0031t0009g0246 a0014c0019t0010g0124 a0019c0038t0002g0081	92	130	0.7077	25	c.71 others(36): Show c.7152_*7153insCTCTCCTCACACACCACACAGCTCA		LAMC1	ENSG00000135862.6	transcript	ENST00000258341.5	protein_coding					4351		chr1	TogoVar
LAMC3_chr9_131004174_131099473	131022215	A A	ACACACAC others(18): Show ACACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0031 a0031	a0031c0025 a0031c0025	a0031c0025t0006 a0031c0025t0006	a0031c0025t0006g0090 a0031c0025t0006g0090	1	222	0.0045	25	c.374 others(42): Show c.374-4070_374-4069insCACACACACACACACACACACACAC		LAMC3	ENSG00000050555.19	transcript	ENST00000361069.9	protein_coding	1/27						chr9	TogoVar
LAMC3_chr9_131004174_131099473	131046518	A A	ATTTTTTT others(18): Show ATTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00642.hp2 NA18999.hp2 HG00642.hp2 NA18999.hp2	a0010 a0019 a0010 a0019	a0010c0042 a0019c0157 a0010c0042 a0019c0157	a0010c0042t0003 a0019c0157t0002 a0010c0042t0003 a0019c0157t0002	a0010c0042t0003g0153 a0019c0157t0002g0123 a0010c0042t0003g0153 a0019c0157t0002g0123	2	66	0.0303	25	c.151 others(42): Show c.1519+860_1519+884dupTTTTTTTTTTTTTTTTTTTTTTTTT		LAMC3	ENSG00000050555.19	transcript	ENST00000361069.9	protein_coding	8/27					INFO_REALIGN_3_PRIME	chr9	TogoVar
LAMC3_chr9_131004174_131099473	131047165	C C	CTTTTTTT others(18): Show CTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG01258.hp2 HG02080.hp2 others(6): Show HG00544.hp1 HG01258.hp2 HG02080.hp2 HG03540.hp2 HG03927.hp1 HG03942.hp2 NA18970.hp2 NA18977.hp2 NA19090.hp1	a0001 a0009 a0015 others(3): Show a0001 a0009 a0015 a0032 a0055 a0081	a0001c0004 a0001c0011 a0009c0027 others(5): Show a0001c0004 a0001c0011 a0009c0027 a0009c0030 a0015c0014 a0032c0220 a0055c0096 a0081c0203	a0001c0004t0020 a0001c0011t0001 a0009c0027t0002 others(5): Show a0001c0004t0020 a0001c0011t0001 a0009c0027t0002 a0009c0030t0002 a0015c0014t0001 a0032c0220t0002 a0055c0096t0003 a0081c0203t0001	a0001c0004t0020g0233 a0001c0011t0001g0077 a0009c0027t0002g0126 others(6): Show a0001c0004t0020g0233 a0001c0011t0001g0077 a0009c0027t0002g0126 a0009c0030t0002g0289 a0009c0030t0002g0320 a0015c0014t0001g0189 a0032c0220t0002g0032 a0055c0096t0003g0080 a0081c0203t0001g0282	9	101	0.0891	25	c.151 others(44): Show c.1519+1522_1519+1523insTTTTTTTTTTTTTTTTTTTTTTTTT		LAMC3	ENSG00000050555.19	transcript	ENST00000361069.9	protein_coding	8/27					INFO_REALIGN_3_PRIME	chr9	TogoVar
LAMP1_chr13_113292239_113328672	113322794	G G	GGGGGTGG others(18): Show GGGGGTGGGGGTGCCGCTCCCTCTGA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02886.hp2 HG03471.hp1 HG03579.hp2 others(1): Show HG02886.hp2 HG03471.hp1 HG03579.hp2 NA21309.hp1	a0001 a0004 a0010 a0001 a0004 a0010	a0001c0001 a0004c0004 a0010c0012 a0001c0001 a0004c0004 a0010c0012	a0001c0001t0009 a0001c0001t0011 a0004c0004t0019 others(1): Show a0001c0001t0009 a0001c0001t0011 a0004c0004t0019 a0010c0012t0001	a0001c0001t0009g0059 a0001c0001t0011g0076 a0004c0004t0019g0279 others(1): Show a0001c0001t0009g0059 a0001c0001t0011g0076 a0004c0004t0019g0279 a0010c0012t0001g0034	4	354	0.0113	25	c.39 others(34): Show c.391_*392insCCTCTGAGGGGTGGGGGTGCCGCTC		LAMP1	ENSG00000185896.11	transcript	ENST00000332556.5	protein_coding	9/9				392	INFO_REALIGN_3_PRIME	chr13	TogoVar
LAMP3_chr3_183117215_183167734	183149574	A A	AAATATAT others(18): Show AAATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0149 a0001c0003t0001g0149	1	292	0.0034	25	c.888 others(42): Show c.888+2800_888+2801insATATATATATATATATATATATATT		LAMP3	ENSG00000078081.8	transcript	ENST00000265598.8	protein_coding	3/5						chr3	TogoVar
LAPTM4B_chr8_97770788_97858013	97832676	T T	TTTTTATT others(18): Show TTTTTATTTTATTTTATTTTATTTTA	intron_variant intron_variant	MODIFIER	HG02523.hp1 HG02922.hp2 HG02523.hp1 HG02922.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0008 a0001c0001t0001 a0001c0001t0008	a0001c0001t0001g0066 a0001c0001t0008g0020 a0001c0001t0001g0066 a0001c0001t0008g0020	2	249	0.0080	25	c.603 others(42): Show c.603+7528_603+7552dupATTTTATTTTATTTTATTTTATTTT		LAPTM4B	ENSG00000104341.17	transcript	ENST00000521545.7	protein_coding	6/6					INFO_REALIGN_3_PRIME	chr8	TogoVar
LAPTM4B_chr8_97770788_97858013	97834144	G G	GAAAAAAA others(18): Show GAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00323.hp1 HG00738.hp1 others(18): Show HG00140.hp1 HG00323.hp1 HG00738.hp1 HG01106.hp2 HG01123.hp1 HG02074.hp2 HG02132.hp1 HG03098.hp1 HG03516.hp1 HG03654.hp2 HG03942.hp1 NA18612.hp1 NA18954.hp1 NA18959.hp2 NA18962.hp2 NA18971.hp1 NA18981.hp1 NA19005.hp1 NA19070.hp1 NA19084.hp2 NA19085.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0011 a0001c0001t0013 a0001c0001t0024 a0001c0002t0009	a0001c0001t0001g0062 a0001c0001t0001g0270 a0001c0001t0001g0350 others(18): Show a0001c0001t0001g0062 a0001c0001t0001g0270 a0001c0001t0001g0350 a0001c0001t0002g0067 a0001c0001t0002g0260 a0001c0001t0002g0265 a0001c0001t0002g0266 a0001c0001t0002g0269 a0001c0001t0002g0271 a0001c0001t0002g0284 a0001c0001t0002g0312 a0001c0001t0002g0328 a0001c0001t0002g0332 a0001c0001t0003g0311 a0001c0001t0005g0150 a0001c0001t0005g0341 a0001c0001t0011g0109 a0001c0001t0013g0113 a0001c0001t0024g0200 a0001c0001t0024g0201 a0001c0002t0009g0168	21	216	0.0972	25	c.603 others(42): Show c.603+9005_603+9006insAAAAAAAAAAAAAAAAAAAAAAAAA		LAPTM4B	ENSG00000104341.17	transcript	ENST00000521545.7	protein_coding	6/6					INFO_REALIGN_3_PRIME	chr8	TogoVar
LAPTM4B_chr8_97770788_97858013	97845868	A A	ACTCCCCT others(18): Show ACTCCCCTCCCCTCCCCTCCCCTCCC	intron_variant intron_variant	MODIFIER	HG02135.hp2 HG02135.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0135 a0001c0001t0005g0135	1	194	0.0052	25	c.604 others(42): Show c.604-5516_604-5492dupCCCCTCCCCTCCCCTCCCCTCCCCT		LAPTM4B	ENSG00000104341.17	transcript	ENST00000521545.7	protein_coding	6/6					INFO_REALIGN_3_PRIME	chr8	TogoVar
LARGE1_chr22_33267509_33925476	33416906	C C	CTTTTTTT others(18): Show CTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0047 a0001c0001t0001g0047	1	17	0.0588	25	c.892 others(44): Show c.892+15254_892+15255insAAAAAAAAAAAAAAAAAAAAAAAAA		LARGE1	ENSG00000133424.22	transcript	ENST00000397394.8	protein_coding	7/14						chr22	TogoVar
LARGE1_chr22_33267509_33925476	33865832	C C	CTTTTTTT others(18): Show CTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0008 a0002c0005t0008	a0002c0005t0008g0071 a0002c0005t0008g0071	1	14	0.0714	25	c.-83 others(44): Show c.-83+54138_-83+54162dupAAAAAAAAAAAAAAAAAAAAAAAAA		LARGE1	ENSG00000133424.22	transcript	ENST00000397394.8	protein_coding	1/14						chr22	TogoVar
LARGE1_chr22_33267509_33925476	33878129	C C	CTTTTTTT others(18): Show CTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01243.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0029 a0001c0006t0029	a0001c0006t0029g0108 a0001c0006t0029g0108	1	21	0.0476	25	c.-83 others(44): Show c.-83+41841_-83+41865dupAAAAAAAAAAAAAAAAAAAAAAAAA		LARGE1	ENSG00000133424.22	transcript	ENST00000397394.8	protein_coding	1/14						chr22	TogoVar
LARP1B_chr4_128056312_128216988	128110676	C C	CAAAAAAA others(18): Show CAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02572.hp1 NA18979.hp1 HG02572.hp1 NA18979.hp1	a0002 a0008 a0002 a0008	a0002c0002 a0008c0009 a0002c0002 a0008c0009	a0002c0002t0002 a0008c0009t0005 a0002c0002t0002 a0008c0009t0005	a0002c0002t0002g0048 a0008c0009t0005g0118 a0002c0002t0002g0048 a0008c0009t0005g0118	2	10	0.2000	25	c.988 others(42): Show c.988+3380_988+3381insAAAAAAAAAAAAAAAAAAAAAAAAA		LARP1B	ENSG00000138709.20	transcript	ENST00000326639.11	protein_coding	9/19					INFO_REALIGN_3_PRIME	chr4	TogoVar
LARP1B_chr4_128056312_128216988	128129164	C C	CAAAAAAA others(18): Show CAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02647.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0064 a0002c0002t0002g0064	1	19	0.0526	25	c.152 others(44): Show c.1524+6992_1524+7016dupAAAAAAAAAAAAAAAAAAAAAAAAA		LARP1B	ENSG00000138709.20	transcript	ENST00000326639.11	protein_coding	11/19					INFO_REALIGN_3_PRIME	chr4	TogoVar
LARP4_chr12_50395885_50485004	50446429	A A	ATATATAT others(18): Show ATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG02293.hp1 NA18747.hp2 others(4): Show HG00673.hp2 HG02293.hp1 NA18747.hp2 NA18997.hp1 NA19004.hp1 NA19004.hp2 NA19066.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0005 a0001c0001t0001g0008 a0001c0001t0001g0206 others(4): Show a0001c0001t0001g0005 a0001c0001t0001g0008 a0001c0001t0001g0206 a0001c0001t0001g0208 a0001c0001t0001g0269 a0001c0001t0001g0292 a0002c0002t0001g0253	7	159	0.0440	25	c.804 others(42): Show c.804+4787_804+4788insATATATATATATATATATATATATT		LARP4	ENSG00000161813.23	transcript	ENST00000398473.7	protein_coding	8/15					INFO_REALIGN_3_PRIME	chr12	TogoVar
LARP4_chr12_50395885_50485004	50446430	T T	TATATATA others(18): Show TATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA19070.hp2 NA19070.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0194 a0001c0001t0001g0194	1	248	0.0040	25	c.804 others(42): Show c.804+4787_804+4788insATATATATATATATATATATATATA		LARP4	ENSG00000161813.23	transcript	ENST00000398473.7	protein_coding	8/15						chr12	TogoVar
LARS2_chr3_45383576_45554407	45484628	A A	ATATATAT others(18): Show ATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19009.hp1 NA19009.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0001	a0001c0005t0001g0010 a0001c0005t0001g0010	1	107	0.0093	25	c.101 others(44): Show c.1019-1064_1019-1063insTATATATATATATATATATATATAT		LARS2	ENSG00000011376.12	transcript	ENST00000645846.2	protein_coding	10/21						chr3	TogoVar
LARS2_chr3_45383576_45554407	45484630	A A	AAAAAAAT others(18): Show AAAAAAATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01978.hp1 NA18957.hp1 HG01978.hp1 NA18957.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0167 a0001c0001t0004g0177 a0001c0001t0004g0167 a0001c0001t0004g0177	2	18	0.1111	25	c.101 others(44): Show c.1019-1061_1019-1060insAAAAATATATATATATATATATATA		LARS2	ENSG00000011376.12	transcript	ENST00000645846.2	protein_coding	10/21					INFO_REALIGN_3_PRIME	chr3	TogoVar
LARS2_chr3_45383576_45554407	45484630	A A	AAAAATAT others(18): Show AAAAATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01928.hp1 HG02004.hp1 HG02300.hp1 HG01928.hp1 HG02004.hp1 HG02300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0168 a0001c0001t0004g0169 a0001c0001t0004g0170 a0001c0001t0004g0168 a0001c0001t0004g0169 a0001c0001t0004g0170	3	19	0.1579	25	c.101 others(44): Show c.1019-1061_1019-1060insAAATATATATATATATATATATATA		LARS2	ENSG00000011376.12	transcript	ENST00000645846.2	protein_coding	10/21					INFO_REALIGN_3_PRIME	chr3	TogoVar
LARS2_chr3_45383576_45554407	45484630	A A	AAATATAT others(18): Show AAATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02895.hp1 NA19043.hp1 HG02895.hp1 NA19043.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0090 a0001c0003t0002g0237 a0001c0003t0002g0090 a0001c0003t0002g0237	2	18	0.1111	25	c.101 others(44): Show c.1019-1061_1019-1060insATATATATATATATATATATATATA		LARS2	ENSG00000011376.12	transcript	ENST00000645846.2	protein_coding	10/21					INFO_REALIGN_3_PRIME	chr3	TogoVar
LARS2_chr3_45383576_45554407	45484630	A A	ATATATAT others(18): Show ATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19064.hp1 NA19064.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0133 a0001c0001t0001g0133	1	17	0.0588	25	c.101 others(44): Show c.1019-1062_1019-1061insTATATATATATATATATATATATAT		LARS2	ENSG00000011376.12	transcript	ENST00000645846.2	protein_coding	10/21						chr3	TogoVar
LASP1_chr17_38865058_38926770	38886242	T T	TAGTGAGC others(18): Show TAGTGAGCCGGGAGAGGGAAAGGCAG	intron_variant intron_variant	MODIFIER	HG02055.hp2 NA19240.hp1 HG02055.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0326 a0001c0001t0001g0333 a0001c0001t0001g0326 a0001c0001t0001g0333	2	394	0.0051	25	c.165 others(42): Show c.165-4174_165-4150dupGAGCCGGGAGAGGGAAAGGCAGAGT		LASP1	ENSG00000002834.19	transcript	ENST00000318008.11	protein_coding	2/6					INFO_REALIGN_3_PRIME	chr17	TogoVar
LATS2_chr13_20968036_21066586	21007549	A A	ATATATAT others(18): Show ATATATATATATATATATATATATAG	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01070.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0002	a0003c0003t0002g0170 a0003c0003t0002g0170	1	309	0.0032	25	c.343 others(44): Show c.343-16146_343-16145insCTATATATATATATATATATATATA		LATS2	ENSG00000150457.9	transcript	ENST00000382592.5	protein_coding	2/7						chr13	TogoVar
LATS2_chr13_20968036_21066586	21007683	G G	GTGTGTAT others(18): Show GTGTGTATATATATATAGTGTATATA	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG01081.hp2 HG01106.hp1 others(4): Show HG00642.hp1 HG01081.hp2 HG01106.hp1 HG01433.hp1 HG02683.hp2 NA18959.hp1 NA19064.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0001c0010 a0004c0004 a0001c0001 a0001c0010 a0004c0004	a0001c0001t0001 a0001c0001t0002 a0001c0010t0001 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0010t0001 a0004c0004t0005	a0001c0001t0001g0200 a0001c0001t0001g0275 a0001c0001t0002g0216 others(4): Show a0001c0001t0001g0200 a0001c0001t0001g0275 a0001c0001t0002g0216 a0001c0010t0001g0065 a0004c0004t0005g0255 a0004c0004t0005g0263 a0004c0004t0005g0268	7	284	0.0246	25	c.343 others(44): Show c.343-16280_343-16279insTATATACACTATATATATATACACA		LATS2	ENSG00000150457.9	transcript	ENST00000382592.5	protein_coding	2/7						chr13	TogoVar
LATS2_chr13_20968036_21066586	21007683	G G	GTGTGTAT others(18): Show GTGTGTATATATATATAGTGTGTATA	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0245 a0001c0001t0001g0245	1	278	0.0036	25	c.343 others(44): Show c.343-16280_343-16279insTATACACACTATATATATATACACA		LATS2	ENSG00000150457.9	transcript	ENST00000382592.5	protein_coding	2/7						chr13	TogoVar
LATS2_chr13_20968036_21066586	21007723	G G	GTGTATAT others(18): Show GTGTATATATACAGTATATATATATA	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG06807.hp1 HG03139.hp1 HG06807.hp1	a0005 a0005	a0005c0016 a0005c0016	a0005c0016t0014 a0005c0016t0014	a0005c0016t0014g0037 a0005c0016t0014g0038 a0005c0016t0014g0037 a0005c0016t0014g0038	2	308	0.0065	25	c.343 others(44): Show c.343-16320_343-16319insTATATATATATACTGTATATATACA		LATS2	ENSG00000150457.9	transcript	ENST00000382592.5	protein_coding	2/7						chr13	TogoVar
LAX1_chr1_203760183_203781372	203770433	A A	AGAGAGAG others(18): Show AGAGAGAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG01261.hp1 NA18973.hp1 HG01261.hp1 NA18973.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0210 a0001c0001t0004g0232 a0001c0001t0001g0210 a0001c0001t0004g0232	2	154	0.0130	25	c.90- others(38): Show c.90-395_90-394insGAGAGAGAGAGAGAGAGAGAGAGAG		LAX1	ENSG00000122188.13	transcript	ENST00000442561.7	protein_coding	1/4						chr1	TogoVar
LBP_chr20_38341482_38382013	38348782	A A	AGTTTAGT others(18): Show AGTTTAGTTTAGTTTAGTTTTGTTTT	intron_variant intron_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0009 a0009	a0009c0021 a0009c0021	a0009c0021t0001 a0009c0021t0001	a0009c0021t0001g0021 a0009c0021t0001g0021	1	381	0.0026	25	c.125 others(40): Show c.125-757_125-756insAGTTTAGTTTTGTTTTGTTTAGTTT		LBP	ENSG00000129988.6	transcript	ENST00000217407.3	protein_coding	1/14					INFO_REALIGN_3_PRIME	chr20	TogoVar
LBP_chr20_38341482_38382013	38348787	A A	AGTTTAGT others(18): Show AGTTTAGTTTAGTTTAGTTTAGTTTT	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG00733.hp1	a0006 a0006	a0006c0006 a0006c0006	a0006c0006t0002 a0006c0006t0002	a0006c0006t0002g0092 a0006c0006t0002g0092	1	100	0.0100	25	c.125 others(40): Show c.125-757_125-756insAGTTTAGTTTAGTTTAGTTTTGTTT		LBP	ENSG00000129988.6	transcript	ENST00000217407.3	protein_coding	1/14					INFO_REALIGN_3_PRIME	chr20	TogoVar
LCA5L_chr21_39400728_39450778	39428598	A A	ATATATAT others(18): Show ATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03239.hp2 NA18993.hp1 HG03239.hp2 NA18993.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0069 a0001c0001t0001g0141 a0001c0001t0001g0069 a0001c0001t0001g0141	2	224	0.0089	25	c.-10 others(38): Show c.-10-96_-10-95insATATATATATATATATATATATATA		LCA5L	ENSG00000157578.14	transcript	ENST00000288350.8	protein_coding	4/10						chr21	TogoVar
LCA5L_chr21_39400728_39450778	39428598	A A	ATATATAT others(18): Show ATATATATATATATATATATATATTT	intron_variant intron_variant	MODIFIER	HG01257.hp1 HG01257.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0038 a0001c0001t0001g0038	1	223	0.0045	25	c.-10 others(38): Show c.-10-96_-10-95insAAATATATATATATATATATATATA		LCA5L	ENSG00000157578.14	transcript	ENST00000288350.8	protein_coding	4/10						chr21	TogoVar
LCA5L_chr21_39400728_39450778	39428599	T T	TATATATA others(18): Show TATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG00642.hp1 HG01978.hp2 others(1): Show HG00621.hp1 HG00642.hp1 HG01978.hp2 HG03654.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0005 a0001c0001 a0002c0002 a0003c0005	a0001c0001t0001 a0002c0002t0002 a0003c0005t0001 a0001c0001t0001 a0002c0002t0002 a0003c0005t0001	a0001c0001t0001g0001 a0001c0001t0001g0078 a0002c0002t0002g0226 others(1): Show a0001c0001t0001g0001 a0001c0001t0001g0078 a0002c0002t0002g0226 a0003c0005t0001g0055	4	265	0.0151	25	c.-10 others(38): Show c.-10-97_-10-96insTATATATATATATATATATATATAT		LCA5L	ENSG00000157578.14	transcript	ENST00000288350.8	protein_coding	4/10						chr21	TogoVar
LCLAT1_chr2_30442246_30649225	30461770	C C	CCTTTTTT others(18): Show CCTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03688.hp2 HG03688.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0035 a0002c0002t0002g0035	1	249	0.0040	25	c.-5+ others(42): Show c.-5+14387_-5+14388insCTTTTTTTTTTTTTTTTTTTTTTTT		LCLAT1	ENSG00000172954.14	transcript	ENST00000379509.8	protein_coding	1/5						chr2	TogoVar
LCLAT1_chr2_30442246_30649225	30466229	T T	TTTTTCTT others(18): Show TTTTTCTTTTCTTTTCTTTTCTTTTC	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG00597.hp1 HG00639.hp2 others(53): Show HG00558.hp2 HG00597.hp1 HG00639.hp2 HG00642.hp2 HG01069.hp2 HG01071.hp2 HG01099.hp1 HG01346.hp2 HG01433.hp2 HG01928.hp1 HG01934.hp1 HG01943.hp1 HG01975.hp2 HG01978.hp1 HG02004.hp2 HG02074.hp1 HG02080.hp1 HG02083.hp2 HG02132.hp1 HG02572.hp2 HG02615.hp1 HG02622.hp2 HG02809.hp1 HG03017.hp1 HG03130.hp1 HG03239.hp2 HG03490.hp2 HG03491.hp2 HG03492.hp1 HG03579.hp1 HG03688.hp2 HG03710.hp2 HG03834.hp1 HG04228.hp2 NA18612.hp1 NA18963.hp2 NA18968.hp2 NA18971.hp1 NA18984.hp2 NA18991.hp1 NA18994.hp1 NA18999.hp1 NA19002.hp1 NA19007.hp2 NA19010.hp2 NA19011.hp2 NA19012.hp2 NA19043.hp2 NA19056.hp2 NA19060.hp1 NA19077.hp2 NA19079.hp1 NA19082.hp1 NA19084.hp2 NA19088.hp2 NA20905.hp1	a0002 a0006 a0002 a0006	a0002c0002 a0006c0006 a0002c0002 a0006c0006	a0002c0002t0002 a0002c0002t0009 a0002c0002t0010 others(13): Show a0002c0002t0002 a0002c0002t0009 a0002c0002t0010 a0002c0002t0014 a0002c0002t0015 a0002c0002t0021 a0002c0002t0022 a0002c0002t0032 a0002c0002t0033 a0002c0002t0034 a0002c0002t0035 a0002c0002t0036 a0002c0002t0037 a0002c0002t0038 a0002c0002t0042 a0006c0006t0041	a0002c0002t0002g0029 a0002c0002t0002g0031 a0002c0002t0002g0032 others(52): Show a0002c0002t0002g0029 a0002c0002t0002g0031 a0002c0002t0002g0032 a0002c0002t0002g0033 a0002c0002t0002g0035 a0002c0002t0002g0039 a0002c0002t0002g0040 a0002c0002t0002g0042 a0002c0002t0002g0048 a0002c0002t0002g0049 a0002c0002t0002g0050 a0002c0002t0002g0052 a0002c0002t0002g0053 a0002c0002t0002g0054 a0002c0002t0002g0056 a0002c0002t0002g0059 a0002c0002t0002g0070 a0002c0002t0002g0071 a0002c0002t0002g0076 a0002c0002t0002g0077 a0002c0002t0002g0078 a0002c0002t0002g0085 a0002c0002t0002g0086 a0002c0002t0002g0087 a0002c0002t0002g0121 a0002c0002t0002g0122 a0002c0002t0002g0123 a0002c0002t0002g0124 a0002c0002t0009g0041 a0002c0002t0009g0044 a0002c0002t0009g0055 a0002c0002t0009g0060 a0002c0002t0009g0066 a0002c0002t0009g0083 a0002c0002t0010g0001 a0002c0002t0010g0068 a0002c0002t0014g0063 a0002c0002t0014g0065 a0002c0002t0014g0082 a0002c0002t0015g0074 a0002c0002t0015g0079 a0002c0002t0015g0081 a0002c0002t0021g0034 a0002c0002t0021g0061 a0002c0002t0022g0043 a0002c0002t0022g0084 a0002c0002t0032g0028 a0002c0002t0033g0080 a0002c0002t0034g0062 a0002c0002t0035g0047 a0002c0002t0036g0037 a0002c0002t0037g0067 a0002c0002t0038g0036 a0002c0002t0042g0051 a0006c0006t0041g0069	56	351	0.1595	25	c.-5+ others(42): Show c.-5+18869_-5+18870insTCTTTTCTTTTCTTTTCTTTTCTTT		LCLAT1	ENSG00000172954.14	transcript	ENST00000379509.8	protein_coding	1/5					INFO_REALIGN_3_PRIME	chr2	TogoVar
LCLAT1_chr2_30442246_30649225	30643121	T T	TCACCTCA others(18): Show TCACCTCACCTCACCGCACCGCACCG	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01169.hp2 HG01256.hp2 HG02818.hp2 others(1): Show HG01169.hp2 HG01256.hp2 HG02818.hp2 HG03831.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0028 a0001c0001t0044 a0001c0001t0047 a0001c0001t0028 a0001c0001t0044 a0001c0001t0047	a0001c0001t0028g0142 a0001c0001t0028g0313 a0001c0001t0044g0348 others(1): Show a0001c0001t0028g0142 a0001c0001t0028g0313 a0001c0001t0044g0348 a0001c0001t0047g0200	4	145	0.0276	25	c.25 others(36): Show c.2505_*2506insCTCACCTCACCGCACCGCACCGCAC		LCLAT1	ENSG00000172954.14	transcript	ENST00000379509.8	protein_coding	6/6				2506	INFO_REALIGN_3_PRIME	chr2	TogoVar
LCLAT1_chr2_30442246_30649225	30643121	T T	TCACCTCA others(18): Show TCACCTCACCTCACCTCACCGCACCG	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02897.hp2 HG02897.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0055 a0001c0001t0055	a0001c0001t0055g0321 a0001c0001t0055g0321	1	142	0.0070	25	c.25 others(36): Show c.2505_*2506insCTCACCTCACCTCACCGCACCGCAC		LCLAT1	ENSG00000172954.14	transcript	ENST00000379509.8	protein_coding	6/6				2506	INFO_REALIGN_3_PRIME	chr2	TogoVar
LCMT2_chr15_43318649_43335573	43334664	T T	TATATATA others(18): Show TATATATATATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01258.hp1 HG02080.hp1 HG03490.hp1 others(1): Show HG01258.hp1 HG02080.hp1 HG03490.hp1 NA19075.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0008 others(1): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0008 a0001c0001t0009	a0001c0001t0002g0000 a0001c0001t0004g0000 a0001c0001t0008g0000 others(1): Show a0001c0001t0002g0000 a0001c0001t0004g0000 a0001c0001t0008g0000 a0001c0001t0009g0000	4	398	0.0101	25	c.-41 others(36): Show c.-4176_-4175insTATATATATATATATATATATATAT		LCMT2	ENSG00000168806.8	transcript	ENST00000305641.7	protein_coding					4092		chr15	TogoVar
LCN15_chr9_136754634_136769518	136769269	T T	TCCATGCA others(18): Show TCCATGCACTGCCCCCCGCCACCCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01099.hp2 HG01109.hp2 HG01257.hp2 others(13): Show HG01099.hp2 HG01109.hp2 HG01257.hp2 HG01258.hp2 HG01361.hp2 HG01433.hp2 HG01943.hp1 HG02922.hp2 HG03491.hp1 HG03492.hp2 HG03942.hp2 HG04184.hp2 HG06807.hp1 NA18971.hp1 NA20805.hp1 NA20905.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0002 a0002c0002t0001g0004 a0002c0002t0001g0002 a0002c0002t0001g0004	16	220	0.0727	25	c.-47 others(36): Show c.-4782_-4781insGGGGGTGGCGGGGGGCAGTGCATGG		LCN15	ENSG00000177984.7	transcript	ENST00000316144.6	protein_coding					4752		chr9	TogoVar

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