Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LRFN5_chr14_41601876_41909549	41826848	T T	TAATAAGT others(18): Show TAATAAGTAATTATTTTGATTCACAA	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00408.hp1 HG00609.hp1 others(70): Show HG00140.hp1 HG00408.hp1 HG00609.hp1 HG00609.hp2 HG00673.hp1 HG00673.hp2 HG00738.hp2 HG01069.hp1 HG01123.hp1 HG01346.hp1 HG01496.hp2 HG01952.hp1 HG01978.hp1 HG01981.hp1 HG02004.hp2 HG02015.hp1 HG02040.hp2 HG02071.hp2 HG02074.hp2 HG02080.hp2 HG02109.hp2 HG02132.hp2 HG02145.hp1 HG02145.hp2 HG02155.hp1 HG02258.hp1 HG02300.hp1 HG02523.hp1 HG02602.hp1 HG02622.hp1 HG02717.hp2 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02965.hp1 HG03041.hp2 HG03130.hp2 HG03239.hp1 HG03453.hp1 HG03486.hp2 HG03490.hp2 HG03654.hp2 HG03710.hp2 HG03927.hp2 HG04115.hp1 HG04115.hp2 NA18522.hp2 NA18612.hp1 NA18942.hp2 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18974.hp1 NA18980.hp1 NA18981.hp2 NA18983.hp2 NA18984.hp1 NA18993.hp2 NA18998.hp2 NA19001.hp1 NA19004.hp2 NA19006.hp1 NA19009.hp2 NA19011.hp1 NA19043.hp1 NA19056.hp2 NA19057.hp2 NA19060.hp2 NA19074.hp1 NA19079.hp2 NA20300.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(13): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0012 a0001c0001t0017 a0001c0002t0001 a0001c0002t0004 a0001c0003t0004 a0001c0005t0023 a0001c0007t0015	a0001c0001t0001g0037 a0001c0001t0001g0040 a0001c0001t0001g0041 others(70): Show a0001c0001t0001g0037 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0001g0057 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0089 a0001c0001t0001g0091 a0001c0001t0001g0109 a0001c0001t0001g0116 a0001c0001t0001g0121 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0141 a0001c0001t0001g0143 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0175 a0001c0001t0001g0189 a0001c0001t0001g0194 a0001c0001t0001g0197 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0206 a0001c0001t0001g0268 a0001c0001t0002g0028 a0001c0001t0002g0031 a0001c0001t0003g0230 a0001c0001t0003g0232 a0001c0001t0003g0233 a0001c0001t0003g0271 a0001c0001t0004g0122 a0001c0001t0004g0125 a0001c0001t0004g0134 a0001c0001t0005g0001 a0001c0001t0005g0002 a0001c0001t0007g0097 a0001c0001t0007g0110 a0001c0001t0007g0117 a0001c0001t0008g0099 a0001c0001t0008g0207 a0001c0001t0008g0209 a0001c0001t0009g0140 a0001c0001t0011g0115 a0001c0001t0012g0114 a0001c0001t0017g0038 a0001c0002t0001g0042 a0001c0002t0001g0058 a0001c0002t0001g0112 a0001c0002t0001g0195 a0001c0002t0004g0169 a0001c0003t0004g0135 a0001c0005t0023g0126 a0001c0007t0015g0211	73	280	0.2607	25	c.-20 others(44): Show c.-20-59658_-20-59634dupAAATAAGTAATTATTTTGATTCACA	LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRFN5_chr14_41601876_41909549	41856675	A A	ATTATTAT others(18): Show ATTATTATTATTATTATTATTATTAT	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0092 a0001c0001t0001g0092	1	280	0.0036	25	c.-20 others(44): Show c.-20-29929_-20-29928insATTATTATTATTATTATTATTATTT	LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRFN5_chr14_41601876_41909549	41856675	A A	ATTATTAT others(18): Show ATTATTATTATTATTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01256.hp1 NA18954.hp1 HG01256.hp1 NA18954.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0252 a0001c0002t0003g0257 a0001c0002t0003g0252 a0001c0002t0003g0257	2	280	0.0071	25	c.-20 others(44): Show c.-20-29929_-20-29928insATTATTATTATTTTTTTTTTTTTTT	LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRFN5_chr14_41601876_41909549	41856675	A A	ATTATTAT others(18): Show ATTATTATTATTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0021 a0001c0002t0021	a0001c0002t0021g0039 a0001c0002t0021g0039	1	280	0.0036	25	c.-20 others(44): Show c.-20-29929_-20-29928insATTATTATTTTTTTTTTTTTTTTTT	LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRFN5_chr14_41601876_41909549	41856675	A A	ATTATTAT others(18): Show ATTATTATTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG03041.hp2 HG03540.hp2 HG02630.hp1 HG03041.hp2 HG03540.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0003 a0001c0002t0004 a0001c0003t0004 a0001c0002t0003 a0001c0002t0004 a0001c0003t0004	a0001c0002t0003g0263 a0001c0002t0004g0138 a0001c0003t0004g0135 a0001c0002t0003g0263 a0001c0002t0004g0138 a0001c0003t0004g0135	3	280	0.0107	25	c.-20 others(44): Show c.-20-29929_-20-29928insATTATTTTTTTTTTTTTTTTTTTTT	LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRFN5_chr14_41601876_41909549	41856675	A A	ATTATTTT others(18): Show ATTATTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02895.hp2 HG02717.hp1 HG02895.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0025 a0001c0002t0004 a0001c0002t0025	a0001c0002t0004g0137 a0001c0002t0025g0266 a0001c0002t0004g0137 a0001c0002t0025g0266	2	280	0.0071	25	c.-20 others(44): Show c.-20-29929_-20-29928insATTTTTTTTTTTTTTTTTTTTTTTT	LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRIF1_chr1_110942190_110968922	110957470	C C	CAAAAAAA others(18): Show CAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02015.hp2 NA18968.hp1 NA18998.hp2 others(4): Show HG02015.hp2 NA18968.hp1 NA18998.hp2 NA19002.hp1 NA19010.hp1 NA19088.hp2 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0003 a0001c0001t0004	a0001c0001t0003g0176 a0001c0001t0004g0024 a0001c0001t0004g0169 others(2): Show a0001c0001t0003g0176 a0001c0001t0004g0024 a0001c0001t0004g0169 a0001c0001t0004g0194 a0001c0001t0004g0226	7	446	0.0157	25	c.69- others(40): Show c.69-4656_69-4655insTTTTTTTTTTTTTTTTTTTTTTTTT	LRIF1	ENSG00000121931.16	transcript	ENST00000369763.5	protein_coding	1/3			chr1	TogoVar
LRIT3_chr4_109843107_109877315	109850422	C C	CTTCTTCT others(18): Show CTTCTTCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	NA19058.hp1 NA19058.hp1	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0006 a0004c0005t0006	a0004c0005t0006g0130 a0004c0005t0006g0130	1	332	0.0030	25	c.117 others(42): Show c.117-1082_117-1081insTTCTTCTTTCTTTCTTTCTTTCTTT	LRIT3	ENSG00000183423.12	transcript	ENST00000594814.6	protein_coding	1/3			chr4	TogoVar
LRMDA_chr10_75426624_76565168	75672524	T T	TCCTCCCC others(18): Show TCCTCCCCTCCCCTCCCCTCCCCTCC	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0003 a0003	a0003c0006 a0003c0006	a0003c0006t0009 a0003c0006t0009	a0003c0006t0009g0001 a0003c0006t0009g0001	1	46	0.0217	25	c.131 others(46): Show c.131+234049_131+234073dupCCCCTCCCCTCCCCTCCCCTCCCC T	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRMDA_chr10_75426624_76565168	75672524	T T	TCCTTTCC others(18): Show TCCTTTCCTCCCCTCCCCTCCCCTCC	intron_variant intron_variant	MODIFIER	HG01081.hp1 NA18522.hp2 HG01081.hp1 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0013 a0001c0001t0011 a0001c0001t0013	a0001c0001t0011g0006 a0001c0001t0013g0022 a0001c0001t0011g0006 a0001c0001t0013g0022	2	46	0.0435	25	c.131 others(46): Show c.131+234033_131+234034insTTCCTCCCCTCCCCTCCCCTCCCC T	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRMDA_chr10_75426624_76565168	76254281	T T	TTACTATA others(18): Show TTACTATACTATACTATACTATACTA	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01081.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0037 a0001c0001t0001g0037	1	46	0.0217	25	c.517 others(44): Show c.517-70097_517-70096insTATACTATACTATACTATACTATAC	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRMDA_chr10_75426624_76565168	76254340	C C	CATACCAT others(18): Show CATACCATACCATACCATACCATCCT	intron_variant intron_variant	MODIFIER	HG02572.hp1 NA18906.hp1 NA20300.hp1 others(1): Show HG02572.hp1 NA18906.hp1 NA20300.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0005 a0001c0001t0006 a0001c0002t0006 others(1): Show a0001c0001t0005 a0001c0001t0006 a0001c0002t0006 a0001c0002t0016	a0001c0001t0005g0034 a0001c0001t0006g0009 a0001c0002t0006g0020 others(1): Show a0001c0001t0005g0034 a0001c0001t0006g0009 a0001c0002t0006g0020 a0001c0002t0016g0043	4	46	0.0870	25	c.517 others(44): Show c.517-70059_517-70058insACCATACCATACCATACCATCCTAT	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRMDA_chr10_75426624_76565168	76254340	C C	CATACCAT others(18): Show CATACCATACCATACCATCCTATCCT	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG03471.hp2 HG02976.hp2 HG03471.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0002c0004 a0001c0002 a0002c0004	a0001c0002t0015 a0002c0004t0003 a0001c0002t0015 a0002c0004t0003	a0001c0002t0015g0040 a0002c0004t0003g0028 a0001c0002t0015g0040 a0002c0004t0003g0028	2	46	0.0435	25	c.517 others(44): Show c.517-70059_517-70058insACCATACCATACCATCCTATCCTAT	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRP11_chr6_149813757_149869359	149859396	A A	ATATATAT others(18): Show ATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG04199.hp2 HG04199.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0191 a0001c0001t0001g0191	1	334	0.0030	25	c.613 others(42): Show c.613+4011_613+4012insATATATATATATATATATATATATA	LRP11	ENSG00000120256.11	transcript	ENST00000239367.7	protein_coding	1/6			chr6	TogoVar
LRP11_chr6_149813757_149869359	149859396	A A	ATATATAT others(18): Show ATATATATATATATATATATTTTTTT	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03453.hp1 HG03209.hp2 HG03453.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0006 a0001c0004t0006	a0001c0004t0006g0015 a0001c0004t0006g0015	2	334	0.0060	25	c.613 others(42): Show c.613+4011_613+4012insAAAAAAATATATATATATATATATA	LRP11	ENSG00000120256.11	transcript	ENST00000239367.7	protein_coding	1/6			chr6	TogoVar
LRP11_chr6_149813757_149869359	149859396	A A	ATATATAT others(18): Show ATATATATATATTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02976.hp2 HG02896.hp2 HG02976.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0003 a0002c0002t0001 a0002c0002t0003	a0002c0002t0001g0041 a0002c0002t0003g0027 a0002c0002t0001g0041 a0002c0002t0003g0027	2	334	0.0060	25	c.613 others(42): Show c.613+4011_613+4012insAAAAAAAAAAAAAAATATATATATA	LRP11	ENSG00000120256.11	transcript	ENST00000239367.7	protein_coding	1/6			chr6	TogoVar
LRP11_chr6_149813757_149869359	149859396	A A	ATATATAT others(18): Show ATATATATATTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG03139.hp1 HG02622.hp2 HG03139.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0006 a0002c0002t0001g0006	2	334	0.0060	25	c.613 others(42): Show c.613+4011_613+4012insAAAAAAAAAAAAAAAAATATATATA	LRP11	ENSG00000120256.11	transcript	ENST00000239367.7	protein_coding	1/6			chr6	TogoVar
LRP11_chr6_149813757_149869359	149859396	A A	ATATATAT others(18): Show ATATATATTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18995.hp1 NA18995.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0003 a0003c0003t0003	a0003c0003t0003g0054 a0003c0003t0003g0054	1	334	0.0030	25	c.613 others(42): Show c.613+4011_613+4012insAAAAAAAAAAAAAAAAAAATATATA	LRP11	ENSG00000120256.11	transcript	ENST00000239367.7	protein_coding	1/6			chr6	TogoVar
LRP11_chr6_149813757_149869359	149859397	T T	TATATATA others(18): Show TATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG01081.hp2 HG01516.hp1 others(6): Show HG00408.hp1 HG01081.hp2 HG01516.hp1 HG01517.hp1 HG02523.hp2 HG02602.hp1 HG02630.hp1 NA18947.hp1 NA19058.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0001t0012 a0001c0004t0003 a0001c0001t0001 a0001c0001t0012 a0001c0004t0003	a0001c0001t0001g0151 a0001c0001t0001g0207 a0001c0001t0001g0208 others(6): Show a0001c0001t0001g0151 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0210 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0275 a0001c0001t0012g0209 a0001c0004t0003g0310	9	334	0.0270	25	c.613 others(42): Show c.613+4010_613+4011insTATATATATATATATATATATATAT	LRP11	ENSG00000120256.11	transcript	ENST00000239367.7	protein_coding	1/6			chr6	TogoVar
LRP1B_chr2_140226423_142136016	140228269	A A	AATATATA others(18): Show AATATATATATATTCCATATATAAAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0027 a0001c0027	a0001c0027t0001 a0001c0027t0001	a0001c0027t0001g0021 a0001c0027t0001g0021	1	28	0.0357	25	c.49 others(36): Show c.4916_*4917insATTTATATATGGAATATATATATAT	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding		3153		chr2	TogoVar
LRP1B_chr2_140226423_142136016	140399176	C C	CACACACA others(18): Show CACACACACACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0024 a0001c0001t0006g0024	1	28	0.0357	25	c.104 others(48): Show c.10415-13168_10415-13167insTGTGTGTGTGTGTGTGTGTGTG TGT	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	66/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	140855493	G G	GAAAAAAA others(18): Show GAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0001 a0001	a0001c0019 a0001c0019	a0001c0019t0001 a0001c0019t0001	a0001c0019t0001g0016 a0001c0019t0001g0016	1	28	0.0357	25	c.458 others(44): Show c.4580-3711_4580-3710insTTTTTTTTTTTTTTTTTTTTTTTTT	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	27/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	141709365	T T	TAAATAAA others(18): Show TAAATAAAATAAAATAAAATAAAATA	intron_variant intron_variant	MODIFIER	HG02486.hp2 NA18522.hp2 HG02486.hp2 NA18522.hp2	a0001 a0001	a0001c0002 a0001c0024 a0001c0002 a0001c0024	a0001c0002t0010 a0001c0024t0005 a0001c0002t0010 a0001c0024t0005	a0001c0002t0010g0022 a0001c0024t0005g0009 a0001c0002t0010g0022 a0001c0024t0005g0009	2	28	0.0714	25	c.205 others(46): Show c.205+100889_205+100913dupTATTTTATTTTATTTTATTTTATT T	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	2/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	142134016	C C	CAAAAAAA others(18): Show CAAAAAAAAAAAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0010 a0001c0002t0010	a0001c0002t0010g0022 a0001c0002t0010g0022	1	28	0.0357	25	c.-32 others(36): Show c.-3288_-3287insTTTTTTTTTTTTTTTTTTTTTTTTT	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding		3001		chr2	TogoVar
LRP2BP_chr4_185358872_185400924	185375487	A A	AAATATAT others(18): Show AAATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18997.hp2 NA18997.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0224 a0001c0001t0001g0224	1	348	0.0029	25	c.330 others(40): Show c.330+125_330+126insATATATATATATATATATATATATT	LRP2BP	ENSG00000109771.16	transcript	ENST00000505916.6	protein_coding	4/8			chr4	TogoVar
LRP2_chr2_169122109_169367534	169160682	T T	TAAAAAAA others(18): Show TAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00544.hp2	a0013 a0013	a0013c0170 a0013c0170	a0013c0170t0011 a0013c0170t0011	a0013c0170t0011g0191 a0013c0170t0011g0191	1	250	0.0040	25	c.118 others(46): Show c.11887+1789_11887+1790insTTTTTTTTTTTTTTTTTTTTTTTT T	LRP2	ENSG00000081479.15	transcript	ENST00000649046.1	protein_coding	63/78			chr2	TogoVar
LRP2_chr2_169122109_169367534	169160685	A A	AAAAAAAA others(18): Show AAAAAAAAAAAAAAAAAAAAAAAAAC	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02735.hp1 HG03516.hp1 others(2): Show HG02109.hp1 HG02735.hp1 HG03516.hp1 NA18999.hp2 NA20905.hp1	a0003 a0005 a0008 others(1): Show a0003 a0005 a0008 a0011	a0003c0028 a0005c0014 a0008c0020 others(2): Show a0003c0028 a0005c0014 a0008c0020 a0011c0055 a0011c0092	a0003c0028t0004 a0005c0014t0007 a0008c0020t0011 others(2): Show a0003c0028t0004 a0005c0014t0007 a0008c0020t0011 a0011c0055t0001 a0011c0092t0006	a0003c0028t0004g0227 a0005c0014t0007g0139 a0008c0020t0011g0070 others(2): Show a0003c0028t0004g0227 a0005c0014t0007g0139 a0008c0020t0011g0070 a0011c0055t0001g0219 a0011c0092t0006g0059	5	250	0.0200	25	c.118 others(46): Show c.11887+1786_11887+1787insGTTTTTTTTTTTTTTTTTTTTTTT T	LRP2	ENSG00000081479.15	transcript	ENST00000649046.1	protein_coding	63/78			chr2	TogoVar
LRP2_chr2_169122109_169367534	169338404	G G	GAAAGAAA others(18): Show GAAAGAAAGAAAGAAAGAAAGAAAGA	intron_variant intron_variant	MODIFIER	HG02056.hp2 HG02056.hp2	a0001 a0001	a0001c0069 a0001c0069	a0001c0069t0007 a0001c0069t0007	a0001c0069t0007g0100 a0001c0069t0007g0100	1	250	0.0040	25	c.80- others(42): Show c.80-17521_80-17520insTCTTTCTTTCTTTCTTTCTTTCTTT	LRP2	ENSG00000081479.15	transcript	ENST00000649046.1	protein_coding	1/78			chr2	TogoVar
LRP5_chr11_68307591_68454275	68409073	A A	AAAAATAT others(18): Show AAAAATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0001 a0001	a0001c0019 a0001c0019	a0001c0019t0001 a0001c0019t0001	a0001c0019t0001g0114 a0001c0019t0001g0114	1	212	0.0047	25	c.209 others(42): Show c.2092-840_2092-839insAAATATATATATATATATATATATA	LRP5	ENSG00000162337.12	transcript	ENST00000294304.12	protein_coding	9/22		INFO_REALIGN_3_PRIME	chr11	TogoVar
LRP5_chr11_68307591_68454275	68409073	A A	AAATATAT others(18): Show AAATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18941.hp1 NA18941.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0191 a0001c0002t0001g0191	1	212	0.0047	25	c.209 others(42): Show c.2092-840_2092-839insATATATATATATATATATATATATA	LRP5	ENSG00000162337.12	transcript	ENST00000294304.12	protein_coding	9/22		INFO_REALIGN_3_PRIME	chr11	TogoVar
LRP5_chr11_68307591_68454275	68409073	A A	ATATATAT others(18): Show ATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0001 a0001	a0001c0020 a0001c0020	a0001c0020t0001 a0001c0020t0001	a0001c0020t0001g0202 a0001c0020t0001g0202	1	212	0.0047	25	c.209 others(42): Show c.2092-841_2092-840insTATATATATATATATATATATATAT	LRP5	ENSG00000162337.12	transcript	ENST00000294304.12	protein_coding	9/22			chr11	TogoVar
LRP6_chr12_12111025_12272044	12164919	T T	TAAAAAAA others(18): Show TAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01952.hp1 HG01952.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0021 a0002c0002t0021	a0002c0002t0021g0095 a0002c0002t0021g0095	1	262	0.0038	25	c.176 others(42): Show c.1762+135_1762+159dupTTTTTTTTTTTTTTTTTTTTTTTTT	LRP6	ENSG00000070018.9	transcript	ENST00000261349.9	protein_coding	8/22			chr12	TogoVar
LRP8_chr1_53237364_53333070	53328160	C C	CCTCCCGC others(18): Show CCTCCCGCTGCCGCCTCCGCCCCACG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0055 a0001c0006t0055	a0001c0006t0055g0211 a0001c0006t0055g0211	1	296	0.0034	25	c.-27 others(34): Show c.-273_-249dupCGTGGGGCGGAGGCGGCAGCGGGAG	LRP8	ENSG00000157193.18	transcript	ENST00000306052.12	protein_coding		91		chr1	TogoVar
LRPPRC_chr2_43881224_44000989	43887143	C C	CAAAAAAA others(18): Show CAAAAAAAAAAAAAAAAAAAAAAAAA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18945.hp1 NA18955.hp1 NA18967.hp1 others(5): Show NA18945.hp1 NA18955.hp1 NA18967.hp1 NA18981.hp2 NA18987.hp2 NA18999.hp1 NA19002.hp1 NA19083.hp1	a0001 a0010 a0001 a0010	a0001c0001 a0001c0002 a0010c0021 a0001c0001 a0001c0002 a0010c0021	a0001c0001t0013 a0001c0001t0022 a0001c0002t0013 others(1): Show a0001c0001t0013 a0001c0001t0022 a0001c0002t0013 a0010c0021t0013	a0001c0001t0013g0183 a0001c0001t0013g0197 a0001c0001t0022g0149 others(5): Show a0001c0001t0013g0183 a0001c0001t0013g0197 a0001c0001t0022g0149 a0001c0001t0022g0151 a0001c0001t0022g0166 a0001c0002t0013g0237 a0001c0002t0013g0269 a0010c0021t0013g0185	8	358	0.0224	25	c.14 others(36): Show c.1456_*1457insTTTTTTTTTTTTTTTTTTTTTTTTT	LRPPRC	ENSG00000138095.20	transcript	ENST00000260665.12	protein_coding	38/38	1456		chr2	TogoVar
LRRC27_chr10_132327193_132386508	132352082	G G	GCTCCGTG others(18): Show GCTCCGTGTGGGGCAGGCGCTGAGGC	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0008 a0001c0005t0008	a0001c0005t0008g0225 a0001c0005t0008g0225	1	290	0.0035	25	c.107 others(42): Show c.1073+344_1073+345insGCGCTGAGGCCTCCGTGTGGGGCAG	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	7/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132352099	T T	TGCTGAGG others(18): Show TGCTGAGGCCTCCGTGTGGGGCAGGC	intron_variant intron_variant	MODIFIER	NA18998.hp2 NA18998.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0182 a0001c0001t0002g0182	1	290	0.0035	25	c.107 others(42): Show c.1073+446_1073+470dupCGCTGAGGCCTCCGTGTGGGGCAGG	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	7/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132352314	G G	GCTCCGTG others(18): Show GCTCCGTGTGGGGCAGGCGCTGAGGC	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG02965.hp2 HG03516.hp2 others(2): Show HG02922.hp2 HG02965.hp2 HG03516.hp2 HG03579.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0009 a0001c0001 a0001c0009	a0001c0001t0002 a0001c0001t0021 a0001c0001t0047 others(2): Show a0001c0001t0002 a0001c0001t0021 a0001c0001t0047 a0001c0009t0002 a0001c0009t0052	a0001c0001t0002g0285 a0001c0001t0021g0287 a0001c0001t0047g0286 others(2): Show a0001c0001t0002g0285 a0001c0001t0021g0287 a0001c0001t0047g0286 a0001c0009t0002g0283 a0001c0009t0052g0282	5	290	0.0172	25	c.107 others(42): Show c.1073+578_1073+602dupCGCTGAGGCCTCCGTGTGGGGCAGG	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	7/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132352542	T T	TGCTGAGG others(18): Show TGCTGAGGCCTCCGTGTGGGGCAGGC	intron_variant intron_variant	MODIFIER	NA18942.hp1 NA18942.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0151 a0001c0001t0001g0151	1	290	0.0035	25	c.107 others(42): Show c.1073+842_1073+866dupTGAGGCCTCCGTGTGGGGCAGGCGC	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	7/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132352629	G G	GCTCCGTG others(18): Show GCTCCGTGTGGGGCAGGCGCTGAGGC	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG03225.hp1 NA18906.hp2 HG02809.hp2 HG03225.hp1 NA18906.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0008 a0001c0005t0015 a0001c0005t0008 a0001c0005t0015	a0001c0005t0008g0225 a0001c0005t0015g0223 a0001c0005t0015g0224 a0001c0005t0008g0225 a0001c0005t0015g0223 a0001c0005t0015g0224	3	290	0.0103	25	c.107 others(42): Show c.1073+906_1073+930dupGTGTGGGGCAGGCGCTGAGGCCTCC	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	7/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC28_chr15_99246481_99395729	99282177	G G	GTTTTTTT others(18): Show GTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG02273.hp1 HG02280.hp2 others(2): Show HG00738.hp2 HG02273.hp1 HG02280.hp2 HG03579.hp1 NA18969.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0095 a0001c0001t0114 others(2): Show a0001c0001t0014 a0001c0001t0095 a0001c0001t0114 a0001c0001t0135 a0001c0001t0201	a0001c0001t0014g0284 a0001c0001t0095g0273 a0001c0001t0114g0287 others(2): Show a0001c0001t0014g0284 a0001c0001t0095g0273 a0001c0001t0114g0287 a0001c0001t0135g0274 a0001c0001t0201g0275	5	332	0.0151	25	c.210 others(42): Show c.210-5066_210-5065insTTTTTTTTTTTTTTTTTTTTTTTTT	LRRC28	ENSG00000168904.15	transcript	ENST00000301981.8	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
LRRC28_chr15_99246481_99395729	99293593	C C	CAAAAAAA others(18): Show CAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0027 a0001c0001t0011g0027	1	332	0.0030	25	c.385 others(42): Show c.385+5658_385+5682dupAAAAAAAAAAAAAAAAAAAAAAAAA	LRRC28	ENSG00000168904.15	transcript	ENST00000301981.8	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
LRRC36_chr16_67321815_67390204	67325376	C C	CTTTATTT others(18): Show CTTTATTTTATTTTATTTTATTTTAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01433.hp1 HG03098.hp1 HG03225.hp2 HG01433.hp1 HG03098.hp1 HG03225.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0006 a0001c0001 a0002c0006	a0001c0001t0001 a0002c0006t0001 a0001c0001t0001 a0002c0006t0001	a0001c0001t0001g0073 a0001c0001t0001g0074 a0002c0006t0001g0036 a0001c0001t0001g0073 a0001c0001t0001g0074 a0002c0006t0001g0036	3	194	0.0155	25	c.-14 others(36): Show c.-1487_-1486insTTTATTTTATTTTATTTTATTTTAT	LRRC36	ENSG00000159708.18	transcript	ENST00000329956.11	protein_coding		1438		chr16	TogoVar
LRRC36_chr16_67321815_67390204	67340722	T T	TATATACT others(18): Show TATATACTCTATAGAATATATACCAC	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01257.hp1 HG02074.hp1 others(7): Show HG01109.hp1 HG01257.hp1 HG02074.hp1 HG02572.hp2 HG02976.hp2 HG03017.hp1 HG03654.hp2 HG04199.hp1 NA18747.hp1 NA18998.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0059 a0001c0001t0001g0075 a0001c0001t0001g0081 others(7): Show a0001c0001t0001g0059 a0001c0001t0001g0075 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0150 a0001c0001t0001g0158	10	194	0.0516	25	c.71- others(40): Show c.71-1112_71-1088dupCACATATACTCTATAGAATATATAC	LRRC36	ENSG00000159708.18	transcript	ENST00000329956.11	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
LRRC36_chr16_67321815_67390204	67340722	T T	TATATACT others(18): Show TATATACTCTATAGAATGTATACCAC	intron_variant intron_variant	MODIFIER	NA19090.hp1 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0102 a0001c0001t0001g0102	1	194	0.0052	25	c.71- others(40): Show c.71-1219_71-1218insGTATACCACATATACTCTATAGAAT	LRRC36	ENSG00000159708.18	transcript	ENST00000329956.11	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
LRRC36_chr16_67321815_67390204	67340820	C C	CACATATA others(18): Show CACATATACTCTATAGAATATATACT	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG03139.hp2 HG02257.hp1 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0178 a0001c0001t0003g0179 a0001c0001t0003g0178 a0001c0001t0003g0179	2	194	0.0103	25	c.71- others(40): Show c.71-1113_71-1112insTACATATACTCTATAGAATATATAC	LRRC36	ENSG00000159708.18	transcript	ENST00000329956.11	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
LRRC36_chr16_67321815_67390204	67340845	C C	CACATATA others(18): Show CACATATACTCTATAGAATATATACT	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00280.hp1 HG00280.hp2 others(93): Show HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00609.hp2 HG00735.hp1 HG00738.hp2 HG01070.hp2 HG01071.hp2 HG01106.hp1 HG01106.hp2 HG01175.hp1 HG01175.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01261.hp1 HG01261.hp2 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01496.hp2 HG01934.hp1 HG01952.hp1 HG01952.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02055.hp1 HG02074.hp2 HG02109.hp1 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02258.hp1 HG02258.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp2 HG02559.hp1 HG02602.hp2 HG02615.hp1 HG02647.hp1 HG02735.hp1 HG02809.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03453.hp1 HG03471.hp2 HG03486.hp2 HG03491.hp1 HG03831.hp1 HG03831.hp2 HG03927.hp2 HG04115.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 NA18747.hp2 NA18906.hp1 NA18951.hp1 NA18951.hp2 NA18955.hp2 NA18982.hp1 NA18998.hp2 NA19003.hp2 NA19043.hp1 NA19077.hp1 NA19077.hp2 NA19079.hp2 NA19090.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20805.hp2 homoSapiens_chm13v2.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0001c0010 a0007c0008 a0001c0001 a0001c0010 a0007c0008	a0001c0001t0001 a0001c0010t0001 a0007c0008t0001 a0001c0001t0001 a0001c0010t0001 a0007c0008t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(93): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0056 a0001c0001t0001g0058 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0077 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0147 a0001c0001t0001g0149 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0181 a0001c0010t0001g0114 a0007c0008t0001g0127	96	194	0.4949	25	c.71- others(40): Show c.71-1065_71-1041dupTACTACATATACTCTATAGAATATA	LRRC36	ENSG00000159708.18	transcript	ENST00000329956.11	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
LRRC39_chr1_100143448_100183256	100179499	C C	CAAAAAAA others(18): Show CAAAAAAAAAAAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02257.hp2 HG02280.hp2 HG02257.hp2 HG02280.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0002c0003t0001 a0001c0001t0001 a0002c0003t0001	a0001c0001t0001g0024 a0002c0003t0001g0058 a0001c0001t0001g0024 a0002c0003t0001g0058	2	288	0.0069	25	c.-14 others(36): Show c.-1484_-1483insTTTTTTTTTTTTTTTTTTTTTTTTT	LRRC39	ENSG00000122477.14	transcript	ENST00000370137.6	protein_coding		1244		chr1	TogoVar
LRRC3C_chr17_39922732_39949999	39948837	C C	CTCATTTA others(18): Show CTCATTTATTCTTAGTTTACAAGAGT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	404	0.0025	25	c.41 others(36): Show c.4103_*4104insTCATTTATTCTTAGTTTACAAGAGT	LRRC3C	ENSG00000204913.7	transcript	ENST00000377924.6	protein_coding		3839		chr17	TogoVar
LRRC40_chr1_70139805_70210579	70187838	G G	GGAAGAGA others(18): Show GGAAGAGAAGAGAAGAGAAGAGAAGA	intron_variant intron_variant	MODIFIER	HG01168.hp2 HG01169.hp2 HG01192.hp1 others(17): Show HG01168.hp2 HG01169.hp2 HG01192.hp1 HG01891.hp2 HG02129.hp2 HG02622.hp2 HG02683.hp2 HG02735.hp2 HG03239.hp1 HG03516.hp2 HG03540.hp2 HG03704.hp2 NA18747.hp1 NA18944.hp2 NA18993.hp1 NA19000.hp1 NA19058.hp1 NA19075.hp2 NA19085.hp1 NA20905.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0005 a0001c0001 a0003c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0003c0005t0002	a0001c0001t0001g0108 a0001c0001t0001g0138 a0001c0001t0001g0146 others(17): Show a0001c0001t0001g0108 a0001c0001t0001g0138 a0001c0001t0001g0146 a0001c0001t0001g0157 a0001c0001t0002g0190 a0001c0001t0002g0194 a0001c0001t0002g0199 a0001c0001t0002g0202 a0001c0001t0002g0213 a0001c0001t0002g0218 a0001c0001t0002g0225 a0001c0001t0002g0244 a0001c0001t0002g0256 a0001c0001t0002g0279 a0001c0001t0002g0283 a0001c0001t0002g0284 a0001c0001t0002g0296 a0001c0001t0003g0290 a0001c0001t0003g0293 a0003c0005t0002g0205	20	320	0.0625	25	c.334 others(40): Show c.334-525_334-501dupTCTTCTCTTCTCTTCTCTTCTCTTC	LRRC40	ENSG00000066557.6	transcript	ENST00000370952.4	protein_coding	2/14			chr1	TogoVar
LRRC40_chr1_70139805_70210579	70190677	T T	TAAAAAAA others(18): Show TAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02486.hp2 HG02717.hp1 others(2): Show HG02280.hp2 HG02486.hp2 HG02717.hp1 HG06807.hp2 NA19085.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0129 a0001c0001t0001g0159 a0001c0001t0001g0160 others(2): Show a0001c0001t0001g0129 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0185	5	320	0.0156	25	c.152 others(42): Show c.152-1405_152-1404insTTTTTTTTTTTTTTTTTTTTTTTTT	LRRC40	ENSG00000066557.6	transcript	ENST00000370952.4	protein_coding	1/14			chr1	TogoVar

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