Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

Chr

Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Samplehapid

No_hapid

No_samplehapid

Start

End

Minac

Maxac

Minlen

Maxlen

Sort By

Order by

regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
PCDHA2_chr5_140789852_141017347	140946611	A A	AATATATA others(19): Show AATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01993.hp1 HG02293.hp2 HG03471.hp1 others(2): Show HG01993.hp1 HG02293.hp2 HG03471.hp1 HG03471.hp2 NA18522.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0002c0002t0003 a0001c0001t0001 a0002c0002t0001 a0002c0002t0003	a0001c0001t0001g0009 a0001c0001t0001g0092 a0002c0002t0001g0127 others(2): Show a0001c0001t0001g0009 a0001c0001t0001g0092 a0002c0002t0001g0127 a0002c0002t0001g0173 a0002c0002t0003g0124	5	202	0.0248	26	c.238 others(47): Show c.2389-32317_2389-32316insTATATATATATATATATATATATA TA	PCDHA2	ENSG00000204969.7	transcript	ENST00000526136.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA2_chr5_140789852_141017347	140946631	T T	TATATATA others(19): Show TATATATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02559.hp2 HG01891.hp2 HG02559.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0003 a0003c0004t0003	a0003c0004t0003g0080 a0003c0004t0003g0081 a0003c0004t0003g0080 a0003c0004t0003g0081	2	202	0.0099	26	c.238 others(47): Show c.2389-32317_2389-32316insTATATATATATATATATATATACA CA	PCDHA2	ENSG00000204969.7	transcript	ENST00000526136.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA2_chr5_140789852_141017347	140946631	T T	TATATATA others(19): Show TATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0007 a0001c0001t0001g0007	1	202	0.0050	26	c.238 others(47): Show c.2389-32317_2389-32316insTATATATATATATATATATATATA CA	PCDHA2	ENSG00000204969.7	transcript	ENST00000526136.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA3_chr5_140796057_141017347	140860192	C C	CATATATA others(19): Show CATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0096 a0001c0001t0001g0096	1	208	0.0048	26	c.239 others(47): Show c.2394+56609_2394+56610insATATATATATATATATATATATAT AT	PCDHA3	ENSG00000255408.4	transcript	ENST00000522353.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA3_chr5_140796057_141017347	140941202	C C	CCTTTCTT others(19): Show CCTTTCTTCTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0093 a0001c0001t0001g0093	1	208	0.0048	26	c.239 others(47): Show c.2395-37740_2395-37739insCTTCTTTCTTTCTTTCTTTCTTTC TT	PCDHA3	ENSG00000255408.4	transcript	ENST00000522353.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA3_chr5_140796057_141017347	140946611	A A	AATATATA others(19): Show AATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01993.hp2 HG02293.hp1 HG03471.hp1 others(2): Show HG01993.hp2 HG02293.hp1 HG03471.hp1 HG03471.hp2 NA18522.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0002 a0004c0003 a0001c0001 a0002c0002 a0004c0003	a0001c0001t0001 a0002c0002t0002 a0004c0003t0002 others(1): Show a0001c0001t0001 a0002c0002t0002 a0004c0003t0002 a0004c0003t0015	a0001c0001t0001g0005 a0001c0001t0001g0029 a0002c0002t0002g0174 others(2): Show a0001c0001t0001g0005 a0001c0001t0001g0029 a0002c0002t0002g0174 a0004c0003t0002g0169 a0004c0003t0015g0158	5	208	0.0240	26	c.239 others(47): Show c.2395-32317_2395-32316insTATATATATATATATATATATATA TA	PCDHA3	ENSG00000255408.4	transcript	ENST00000522353.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA3_chr5_140796057_141017347	140946631	T T	TATATATA others(19): Show TATATATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02559.hp2 HG01891.hp1 HG02559.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0003 a0003c0004t0003	a0003c0004t0003g0105 a0003c0004t0003g0106 a0003c0004t0003g0105 a0003c0004t0003g0106	2	208	0.0096	26	c.239 others(47): Show c.2395-32317_2395-32316insTATATATATATATATATATATACA CA	PCDHA3	ENSG00000255408.4	transcript	ENST00000522353.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA3_chr5_140796057_141017347	140946631	T T	TATATATA others(19): Show TATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0027 a0001c0001t0001g0027	1	208	0.0048	26	c.239 others(47): Show c.2395-32317_2395-32316insTATATATATATATATATATATATA CA	PCDHA3	ENSG00000255408.4	transcript	ENST00000522353.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA4_chr5_140802068_141017347	140860192	C C	CATATATA others(19): Show CATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00280.hp1	a0003 a0003	a0003c0012 a0003c0012	a0003c0012t0001 a0003c0012t0001	a0003c0012t0001g0005 a0003c0012t0001g0005	1	212	0.0047	26	c.238 others(47): Show c.2385+50628_2385+50629insATATATATATATATATATATATAT AT	PCDHA4	ENSG00000204967.13	transcript	ENST00000530339.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA4_chr5_140802068_141017347	140941202	C C	CCTTTCTT others(19): Show CCTTTCTTCTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0014 a0003c0003t0001g0014	1	212	0.0047	26	c.238 others(47): Show c.2386-37740_2386-37739insCTTCTTTCTTTCTTTCTTTCTTTC TT	PCDHA4	ENSG00000204967.13	transcript	ENST00000530339.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA4_chr5_140802068_141017347	140946611	A A	AATATATA others(19): Show AATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01993.hp2 HG02293.hp1 HG03471.hp1 others(2): Show HG01993.hp2 HG02293.hp1 HG03471.hp1 HG03471.hp2 NA18522.hp1	a0001 a0003 a0005 a0001 a0003 a0005	a0001c0001 a0003c0003 a0005c0009 a0001c0001 a0003c0003 a0005c0009	a0001c0001t0002 a0001c0001t0014 a0003c0003t0001 others(1): Show a0001c0001t0002 a0001c0001t0014 a0003c0003t0001 a0005c0009t0001	a0001c0001t0002g0177 a0001c0001t0002g0183 a0001c0001t0014g0165 others(2): Show a0001c0001t0002g0177 a0001c0001t0002g0183 a0001c0001t0014g0165 a0003c0003t0001g0081 a0005c0009t0001g0088	5	212	0.0236	26	c.238 others(47): Show c.2386-32317_2386-32316insTATATATATATATATATATATATA TA	PCDHA4	ENSG00000204967.13	transcript	ENST00000530339.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA4_chr5_140802068_141017347	140946631	T T	TATATATA others(19): Show TATATATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02559.hp2 HG01891.hp1 HG02559.hp2	a0006 a0006	a0006c0006 a0006c0006	a0006c0006t0003 a0006c0006t0003	a0006c0006t0003g0206 a0006c0006t0003g0207 a0006c0006t0003g0206 a0006c0006t0003g0207	2	212	0.0094	26	c.238 others(47): Show c.2386-32317_2386-32316insTATATATATATATATATATATACA CA	PCDHA4	ENSG00000204967.13	transcript	ENST00000530339.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA4_chr5_140802068_141017347	140946631	T T	TATATATA others(19): Show TATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0005 a0005	a0005c0009 a0005c0009	a0005c0009t0001 a0005c0009t0001	a0005c0009t0001g0086 a0005c0009t0001g0086	1	212	0.0047	26	c.238 others(47): Show c.2386-32317_2386-32316insTATATATATATATATATATATATA CA	PCDHA4	ENSG00000204967.13	transcript	ENST00000530339.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA5_chr5_140816613_141017347	140860192	C C	CATATATA others(19): Show CATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00280.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0210 a0001c0001t0003g0210	1	220	0.0046	26	c.235 others(47): Show c.2352+36073_2352+36074insATATATATATATATATATATATAT AT	PCDHA5	ENSG00000204965.9	transcript	ENST00000529859.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA5_chr5_140816613_141017347	140941202	C C	CCTTTCTT others(19): Show CCTTTCTTCTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0048 a0001c0001t0001g0048	1	220	0.0046	26	c.235 others(47): Show c.2353-37740_2353-37739insCTTCTTTCTTTCTTTCTTTCTTTC TT	PCDHA5	ENSG00000204965.9	transcript	ENST00000529859.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA5_chr5_140816613_141017347	140946611	A A	AATATATA others(19): Show AATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01993.hp1 HG02293.hp1 HG03471.hp1 others(2): Show HG01993.hp1 HG02293.hp1 HG03471.hp1 HG03471.hp2 NA18522.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0002 a0002c0002t0017 a0001c0001t0001 a0002c0002t0002 a0002c0002t0017	a0001c0001t0001g0196 a0001c0001t0001g0214 a0002c0002t0002g0086 others(2): Show a0001c0001t0001g0196 a0001c0001t0001g0214 a0002c0002t0002g0086 a0002c0002t0002g0104 a0002c0002t0017g0070	5	220	0.0227	26	c.235 others(47): Show c.2353-32317_2353-32316insTATATATATATATATATATATATA TA	PCDHA5	ENSG00000204965.9	transcript	ENST00000529859.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA5_chr5_140816613_141017347	140946631	T T	TATATATA others(19): Show TATATATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02559.hp1 HG01891.hp1 HG02559.hp1	a0008 a0008	a0008c0009 a0008c0009	a0008c0009t0005 a0008c0009t0005	a0008c0009t0005g0185 a0008c0009t0005g0186 a0008c0009t0005g0185 a0008c0009t0005g0186	2	220	0.0091	26	c.235 others(47): Show c.2353-32317_2353-32316insTATATATATATATATATATATACA CA	PCDHA5	ENSG00000204965.9	transcript	ENST00000529859.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA5_chr5_140816613_141017347	140946631	T T	TATATATA others(19): Show TATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0206 a0001c0001t0001g0206	1	220	0.0046	26	c.235 others(47): Show c.2353-32317_2353-32316insTATATATATATATATATATATATA CA	PCDHA5	ENSG00000204965.9	transcript	ENST00000529859.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA6_chr5_140822960_141017347	140825350	T T	TATATATT others(19): Show TATATATTAGATATATAAATATCTAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp1 HG00323.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0142 a0001c0002t0001g0142	1	236	0.0042	26	c.-27 others(37): Show c.-2742_-2741insATATATTAGATATATAAATATCTAAA	PCDHA6	ENSG00000081842.18	transcript	ENST00000529310.6	protein_coding		2609		chr5	TogoVar
PCDHA6_chr5_140822960_141017347	140860192	C C	CATATATA others(19): Show CATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0125 a0001c0001t0001g0125	1	236	0.0042	26	c.239 others(47): Show c.2394+29715_2394+29716insATATATATATATATATATATATAT AT	PCDHA6	ENSG00000081842.18	transcript	ENST00000529310.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA6_chr5_140822960_141017347	140941202	C C	CCTTTCTT others(19): Show CCTTTCTTCTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0001 a0003c0003t0001g0001	1	236	0.0042	26	c.239 others(47): Show c.2395-37740_2395-37739insCTTCTTTCTTTCTTTCTTTCTTTC TT	PCDHA6	ENSG00000081842.18	transcript	ENST00000529310.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA6_chr5_140822960_141017347	140946611	A A	AATATATA others(19): Show AATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG01993.hp1 HG02293.hp1 others(3): Show HG00323.hp1 HG01993.hp1 HG02293.hp1 HG03471.hp1 HG03471.hp2 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0020 a0001c0001 a0001c0002 a0001c0020	a0001c0001t0001 a0001c0002t0001 a0001c0002t0003 others(1): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0003 a0001c0020t0001	a0001c0001t0001g0098 a0001c0001t0001g0109 a0001c0002t0001g0142 others(3): Show a0001c0001t0001g0098 a0001c0001t0001g0109 a0001c0002t0001g0142 a0001c0002t0001g0192 a0001c0002t0003g0200 a0001c0020t0001g0146	6	236	0.0254	26	c.239 others(47): Show c.2395-32317_2395-32316insTATATATATATATATATATATATA TA	PCDHA6	ENSG00000081842.18	transcript	ENST00000529310.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA6_chr5_140822960_141017347	140946631	T T	TATATATA others(19): Show TATATATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02559.hp1 HG01891.hp1 HG02559.hp1	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0003 a0004c0005t0003	a0004c0005t0003g0130 a0004c0005t0003g0131 a0004c0005t0003g0130 a0004c0005t0003g0131	2	236	0.0085	26	c.239 others(47): Show c.2395-32317_2395-32316insTATATATATATATATATATATACA CA	PCDHA6	ENSG00000081842.18	transcript	ENST00000529310.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA6_chr5_140822960_141017347	140946631	T T	TATATATA others(19): Show TATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0099 a0001c0001t0001g0099	1	236	0.0042	26	c.239 others(47): Show c.2395-32317_2395-32316insTATATATATATATATATATATATA CA	PCDHA6	ENSG00000081842.18	transcript	ENST00000529310.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA7_chr5_140829269_141017347	140860192	C C	CATATATA others(19): Show CATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00280.hp2	a0009 a0009	a0009c0025 a0009c0025	a0009c0025t0001 a0009c0025t0001	a0009c0025t0001g0124 a0009c0025t0001g0124	1	248	0.0040	26	c.235 others(47): Show c.2355+23462_2355+23463insATATATATATATATATATATATAT AT	PCDHA7	ENSG00000204963.6	transcript	ENST00000525929.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA7_chr5_140829269_141017347	140941202	C C	CCTTTCTT others(19): Show CCTTTCTTCTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0061 a0002c0001t0001g0061	1	248	0.0040	26	c.235 others(47): Show c.2356-37740_2356-37739insCTTCTTTCTTTCTTTCTTTCTTTC TT	PCDHA7	ENSG00000204963.6	transcript	ENST00000525929.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA7_chr5_140829269_141017347	140946611	A A	AATATATA others(19): Show AATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG01993.hp1 HG02293.hp2 others(3): Show HG00323.hp1 HG01993.hp1 HG02293.hp2 HG03471.hp1 HG03471.hp2 NA18522.hp1	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0007	a0001c0002 a0002c0001 a0004c0006 others(1): Show a0001c0002 a0002c0001 a0004c0006 a0007c0008	a0001c0002t0001 a0001c0002t0003 a0002c0001t0001 others(2): Show a0001c0002t0001 a0001c0002t0003 a0002c0001t0001 a0004c0006t0001 a0007c0008t0001	a0001c0002t0001g0197 a0001c0002t0001g0199 a0001c0002t0003g0212 others(3): Show a0001c0002t0001g0197 a0001c0002t0001g0199 a0001c0002t0003g0212 a0002c0001t0001g0100 a0004c0006t0001g0012 a0007c0008t0001g0237	6	248	0.0242	26	c.235 others(47): Show c.2356-32317_2356-32316insTATATATATATATATATATATATA TA	PCDHA7	ENSG00000204963.6	transcript	ENST00000525929.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA7_chr5_140829269_141017347	140946631	T T	TATATATA others(19): Show TATATATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02559.hp1 HG01891.hp2 HG02559.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0139 a0001c0002t0003g0140 a0001c0002t0003g0139 a0001c0002t0003g0140	2	248	0.0081	26	c.235 others(47): Show c.2356-32317_2356-32316insTATATATATATATATATATATACA CA	PCDHA7	ENSG00000204963.6	transcript	ENST00000525929.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA7_chr5_140829269_141017347	140946631	T T	TATATATA others(19): Show TATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0101 a0002c0001t0001g0101	1	248	0.0040	26	c.235 others(47): Show c.2356-32317_2356-32316insTATATATATATATATATATATATA CA	PCDHA7	ENSG00000204963.6	transcript	ENST00000525929.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA8_chr5_140836187_141017347	140860192	C C	CATATATA others(19): Show CATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00280.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0129 a0003c0003t0001g0129	1	258	0.0039	26	c.239 others(47): Show c.2394+16485_2394+16486insATATATATATATATATATATATAT AT	PCDHA8	ENSG00000204962.6	transcript	ENST00000531613.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA8_chr5_140836187_141017347	140941202	C C	CCTTTCTT others(19): Show CCTTTCTTCTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0018 a0003c0003t0001g0018	1	258	0.0039	26	c.239 others(47): Show c.2395-37740_2395-37739insCTTCTTTCTTTCTTTCTTTCTTTC TT	PCDHA8	ENSG00000204962.6	transcript	ENST00000531613.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA8_chr5_140836187_141017347	140946611	A A	AATATATA others(19): Show AATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG01192.hp1 HG01993.hp1 others(4): Show HG00323.hp1 HG01192.hp1 HG01993.hp1 HG02293.hp2 HG03471.hp1 HG03471.hp2 NA18522.hp1	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0005	a0001c0001 a0002c0002 a0004c0004 others(1): Show a0001c0001 a0002c0002 a0004c0004 a0005c0005	a0001c0001t0001 a0001c0001t0003 a0002c0002t0001 others(2): Show a0001c0001t0001 a0001c0001t0003 a0002c0002t0001 a0004c0004t0001 a0005c0005t0001	a0001c0001t0001g0031 a0001c0001t0001g0121 a0001c0001t0001g0125 others(4): Show a0001c0001t0001g0031 a0001c0001t0001g0121 a0001c0001t0001g0125 a0001c0001t0003g0034 a0002c0002t0001g0040 a0004c0004t0001g0155 a0005c0005t0001g0014	7	258	0.0271	26	c.239 others(47): Show c.2395-32317_2395-32316insTATATATATATATATATATATATA TA	PCDHA8	ENSG00000204962.6	transcript	ENST00000531613.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA8_chr5_140836187_141017347	140946631	T T	TATATATA others(19): Show TATATATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02559.hp2 HG01891.hp2 HG02559.hp2	a0007 a0007	a0007c0007 a0007c0007	a0007c0007t0003 a0007c0007t0003	a0007c0007t0003g0132 a0007c0007t0003g0139 a0007c0007t0003g0132 a0007c0007t0003g0139	2	258	0.0078	26	c.239 others(47): Show c.2395-32317_2395-32316insTATATATATATATATATATATACA CA	PCDHA8	ENSG00000204962.6	transcript	ENST00000531613.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA8_chr5_140836187_141017347	140946631	T T	TATATATA others(19): Show TATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0001 a0004c0004t0001	a0004c0004t0001g0156 a0004c0004t0001g0156	1	258	0.0039	26	c.239 others(47): Show c.2395-32317_2395-32316insTATATATATATATATATATATATA CA	PCDHA8	ENSG00000204962.6	transcript	ENST00000531613.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA9_chr5_140843382_141017347	140860192	C C	CATATATA others(19): Show CATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00280.hp1	a0003 a0003	a0003c0037 a0003c0037	a0003c0037t0001 a0003c0037t0001	a0003c0037t0001g0218 a0003c0037t0001g0218	1	256	0.0039	26	c.239 others(45): Show c.2394+9311_2394+9312insATATATATATATATATATATATATAT	PCDHA9	ENSG00000204961.7	transcript	ENST00000532602.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA9_chr5_140843382_141017347	140941202	C C	CCTTTCTT others(19): Show CCTTTCTTCTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0118 a0002c0002t0001g0118	1	256	0.0039	26	c.239 others(47): Show c.2395-37740_2395-37739insCTTCTTTCTTTCTTTCTTTCTTTC TT	PCDHA9	ENSG00000204961.7	transcript	ENST00000532602.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA9_chr5_140843382_141017347	140946611	A A	AATATATA others(19): Show AATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00738.hp2 HG01192.hp1 others(5): Show HG00323.hp1 HG00738.hp2 HG01192.hp1 HG01993.hp2 HG02293.hp2 HG03471.hp1 HG03471.hp2 NA18522.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0006 a0013	a0001c0001 a0001c0005 a0002c0002 others(3): Show a0001c0001 a0001c0005 a0002c0002 a0003c0004 a0006c0007 a0013c0015	a0001c0001t0001 a0001c0005t0001 a0002c0002t0001 others(4): Show a0001c0001t0001 a0001c0005t0001 a0002c0002t0001 a0002c0002t0003 a0003c0004t0001 a0006c0007t0001 a0013c0015t0001	a0001c0001t0001g0151 a0001c0005t0001g0213 a0002c0002t0001g0071 others(5): Show a0001c0001t0001g0151 a0001c0005t0001g0213 a0002c0002t0001g0071 a0002c0002t0003g0233 a0003c0004t0001g0050 a0006c0007t0001g0128 a0006c0007t0001g0134 a0013c0015t0001g0016	8	256	0.0313	26	c.239 others(47): Show c.2395-32317_2395-32316insTATATATATATATATATATATATA TA	PCDHA9	ENSG00000204961.7	transcript	ENST00000532602.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA9_chr5_140843382_141017347	140946631	T T	TATATATA others(19): Show TATATATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02559.hp1 HG01891.hp1 HG02559.hp1	a0005 a0020 a0005 a0020	a0005c0006 a0020c0034 a0005c0006 a0020c0034	a0005c0006t0003 a0020c0034t0003 a0005c0006t0003 a0020c0034t0003	a0005c0006t0003g0248 a0020c0034t0003g0249 a0005c0006t0003g0248 a0020c0034t0003g0249	2	256	0.0078	26	c.239 others(47): Show c.2395-32317_2395-32316insTATATATATATATATATATATACA CA	PCDHA9	ENSG00000204961.7	transcript	ENST00000532602.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA9_chr5_140843382_141017347	140946631	T T	TATATATA others(19): Show TATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0001	a0001c0005t0001g0214 a0001c0005t0001g0214	1	256	0.0039	26	c.239 others(47): Show c.2395-32317_2395-32316insTATATATATATATATATATATATA CA	PCDHA9	ENSG00000204961.7	transcript	ENST00000532602.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHAC1_chr5_140921299_141017347	140941202	C C	CCTTTCTT others(19): Show CCTTTCTTCTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0008 a0001c0003t0008	a0001c0003t0008g0240 a0001c0003t0008g0240	1	280	0.0036	26	c.243 others(47): Show c.2433+11884_2433+11885insCTTCTTTCTTTCTTTCTTTCTTTC TT	PCDHAC1	ENSG00000248383.5	transcript	ENST00000253807.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHAC1_chr5_140921299_141017347	140946611	A A	AATATATA others(19): Show AATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00738.hp2 HG01192.hp2 others(5): Show HG00323.hp2 HG00738.hp2 HG01192.hp2 HG01993.hp1 HG02293.hp1 HG03471.hp1 HG03471.hp2 NA18522.hp2	a0001 a0002 a0012 a0001 a0002 a0012	a0001c0003 a0001c0004 a0002c0001 others(1): Show a0001c0003 a0001c0004 a0002c0001 a0012c0012	a0001c0003t0002 a0001c0003t0008 a0001c0004t0001 others(2): Show a0001c0003t0002 a0001c0003t0008 a0001c0004t0001 a0002c0001t0001 a0012c0012t0025	a0001c0003t0002g0248 a0001c0003t0002g0275 a0001c0003t0008g0239 others(5): Show a0001c0003t0002g0248 a0001c0003t0002g0275 a0001c0003t0008g0239 a0001c0004t0001g0224 a0001c0004t0001g0225 a0002c0001t0001g0083 a0002c0001t0001g0084 a0012c0012t0025g0271	8	280	0.0286	26	c.243 others(47): Show c.2433+17307_2433+17308insTATATATATATATATATATATATA TA	PCDHAC1	ENSG00000248383.5	transcript	ENST00000253807.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHAC1_chr5_140921299_141017347	140946631	T T	TATATATA others(19): Show TATATATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02559.hp2 HG01891.hp2 HG02559.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0203 a0001c0002t0005g0204 a0001c0002t0005g0203 a0001c0002t0005g0204	2	280	0.0071	26	c.243 others(47): Show c.2433+17307_2433+17308insTATATATATATATATATATATACA CA	PCDHAC1	ENSG00000248383.5	transcript	ENST00000253807.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHAC1_chr5_140921299_141017347	140946631	T T	TATATATA others(19): Show TATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0247 a0001c0003t0002g0247	1	280	0.0036	26	c.243 others(47): Show c.2433+17307_2433+17308insTATATATATATATATATATATATA CA	PCDHAC1	ENSG00000248383.5	transcript	ENST00000253807.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHB11_chr5_141194627_141208779	141204212	C C	CAAAAAAA others(19): Show CAAAAAAAAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02717.hp1 HG03579.hp2 HG02717.hp1 HG03579.hp2	a0005 a0005	a0005c0007 a0005c0007	a0005c0007t0009 a0005c0007t0053 a0005c0007t0009 a0005c0007t0053	a0005c0007t0009g0000 a0005c0007t0053g0000 a0005c0007t0009g0000 a0005c0007t0053g0000	2	444	0.0045	26	c.20 others(37): Show c.2044_*2045insAAAAAAAAAAAAAAAAAAAAAAAAAA	PCDHB11	ENSG00000197479.7	transcript	ENST00000354757.5	protein_coding		434		chr5	TogoVar
PCDHB12_chr5_141203719_141217571	141204212	C C	CAAAAAAA others(19): Show CAAAAAAAAAAAAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0000 a0002c0002t0004g0000	1	432	0.0023	26	c.-46 others(37): Show c.-4696_-4695insAAAAAAAAAAAAAAAAAAAAAAAAAA	PCDHB12	ENSG00000120328.6	transcript	ENST00000239450.4	protein_coding		4506		chr5	TogoVar
PCDHB13_chr5_141208919_141223979	141221429	G G	GTATATAT others(19): Show GTATATATATATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp1 HG01261.hp1 HG02055.hp2 others(5): Show HG01243.hp1 HG01261.hp1 HG02055.hp2 HG02129.hp2 HG02647.hp1 HG02717.hp2 NA18522.hp1 NA19056.hp1	a0003 a0004 a0007 others(1): Show a0003 a0004 a0007 a0008	a0003c0003 a0004c0005 a0007c0007 others(1): Show a0003c0003 a0004c0005 a0007c0007 a0008c0010	a0003c0003t0003 a0004c0005t0003 a0007c0007t0011 others(1): Show a0003c0003t0003 a0004c0005t0003 a0007c0007t0011 a0008c0010t0003	a0003c0003t0003g0000 a0004c0005t0003g0000 a0007c0007t0011g0000 others(1): Show a0003c0003t0003g0000 a0004c0005t0003g0000 a0007c0007t0011g0000 a0008c0010t0003g0000	8	428	0.0187	26	c.49 others(37): Show c.4909_*4910insTATATATATATATATATATATATATA	PCDHB13	ENSG00000187372.11	transcript	ENST00000341948.6	protein_coding		2451		chr5	TogoVar
PCDHB14_chr5_141218343_141232759	141221429	G G	GTATATAT others(19): Show GTATATATATATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp2 HG01261.hp1 HG02055.hp2 others(5): Show HG01243.hp2 HG01261.hp1 HG02055.hp2 HG02129.hp2 HG02647.hp2 HG02717.hp2 NA18522.hp2 NA19056.hp1	a0001 a0023 a0001 a0023	a0001c0004 a0001c0029 a0023c0017 a0001c0004 a0001c0029 a0023c0017	a0001c0004t0004 a0001c0004t0005 a0001c0004t0006 others(2): Show a0001c0004t0004 a0001c0004t0005 a0001c0004t0006 a0001c0029t0007 a0023c0017t0003	a0001c0004t0004g0000 a0001c0004t0005g0000 a0001c0004t0006g0000 others(2): Show a0001c0004t0004g0000 a0001c0004t0005g0000 a0001c0004t0006g0000 a0001c0029t0007g0000 a0023c0017t0003g0000	8	448	0.0179	26	c.-20 others(37): Show c.-2077_-2076insTATATATATATATATATATATATATA	PCDHB14	ENSG00000120327.7	transcript	ENST00000239449.7	protein_coding		1913		chr5	TogoVar
PCDHGA1_chr5_141325514_141517975	141379889	C C	CTTTTTTT others(19): Show CTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA19240.hp1 NA18906.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0213 a0001c0001t0001g0214	2	268	0.0075	26	c.242 others(47): Show c.2421+46789_2421+46814dupTTTTTTTTTTTTTTTTTTTTTTTT TT	PCDHGA1	ENSG00000204956.6	transcript	ENST00000517417.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA2_chr5_141333760_141517975	141347160	T T	TTTCTTTC others(19): Show TTTCTTTCTTTCTTTCTTTCTTTCTTC	intron_variant intron_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0144 a0003c0003t0001g0144	1	272	0.0037	26	c.242 others(45): Show c.2424+5786_2424+5787insTCTTCTTCTTTCTTTCTTTCTTTCTT	PCDHGA2	ENSG00000081853.15	transcript	ENST00000394576.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA2_chr5_141333760_141517975	141379889	C C	CTTTTTTT others(19): Show CTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA19240.hp1 NA18906.hp1 NA19240.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0034 a0001c0004t0001g0188 a0001c0004t0001g0034 a0001c0004t0001g0188	2	272	0.0074	26	c.242 others(47): Show c.2424+38499_2424+38524dupTTTTTTTTTTTTTTTTTTTTTTTT TT	PCDHGA2	ENSG00000081853.15	transcript	ENST00000394576.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar

Search by Variant

Search

Search Results