Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
PLCD4_chr2_218602899_218642175	218616927	T T	TATATATA others(19): Show TATATATATATATATATATATAGAGAG	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00323.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0166 a0001c0002t0001g0166	1	298	0.0034	26	c.181 others(41): Show c.181+866_181+867insTATATATATATATATATATAGAGAGA	PLCD4	ENSG00000115556.14	transcript	ENST00000450993.7	protein_coding	3/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
PLCD4_chr2_218602899_218642175	218616927	T T	TATATATA others(19): Show TATATATATATATATATATATATAGAG	intron_variant intron_variant	MODIFIER	NA18940.hp2 NA18940.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0095 a0001c0002t0001g0095	1	298	0.0034	26	c.181 others(41): Show c.181+866_181+867insTATATATATATATATATATATAGAGA	PLCD4	ENSG00000115556.14	transcript	ENST00000450993.7	protein_coding	3/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
PLCE1_chr10_93988931_94337823	94106912	T T	TTCTCTCT others(19): Show TTCTCTCTCTCTCTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00609.hp1 HG00609.hp2 others(3): Show HG00558.hp1 HG00609.hp1 HG00609.hp2 HG02970.hp1 HG03209.hp1 NA20752.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0022	a0001c0001 a0001c0007 a0002c0004 others(3): Show a0001c0001 a0001c0007 a0002c0004 a0003c0002 a0004c0008 a0022c0024	a0001c0001t0061 a0001c0007t0023 a0002c0004t0002 others(3): Show a0001c0001t0061 a0001c0007t0023 a0002c0004t0002 a0003c0002t0005 a0004c0008t0008 a0022c0024t0007	a0001c0001t0061g0051 a0001c0007t0023g0039 a0002c0004t0002g0080 others(3): Show a0001c0001t0061g0051 a0001c0007t0023g0039 a0002c0004t0002g0080 a0003c0002t0005g0111 a0004c0008t0008g0045 a0022c0024t0007g0071	6	118	0.0509	26	c.120 others(47): Show c.1207-25255_1207-25230dupTCTCTCTCTCTCTCTCTCTCTCTC TC	PLCE1	ENSG00000138193.17	transcript	ENST00000371380.8	protein_coding	2/32		INFO_REALIGN_3_PRIME	chr10	TogoVar
PLCE1_chr10_93988931_94337823	94179512	G G	GTTTTTTT others(19): Show GTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG02922.hp2 HG01081.hp2 HG02922.hp2	a0002 a0002	a0002c0015 a0002c0015	a0002c0015t0010 a0002c0015t0010	a0002c0015t0010g0093 a0002c0015t0010g0094 a0002c0015t0010g0093 a0002c0015t0010g0094	2	118	0.0170	26	c.180 others(45): Show c.1809+8034_1809+8035insTTTTTTTTTTTTTTTTTTTTTTTTTT	PLCE1	ENSG00000138193.17	transcript	ENST00000371380.8	protein_coding	4/32		INFO_REALIGN_3_PRIME	chr10	TogoVar
PLCG2_chr16_81774291_81967685	81802093	C C	CTTTTTTT others(19): Show CTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02071.hp2 HG02074.hp1 HG02071.hp2 HG02074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0194 a0001c0001t0004g0321 a0001c0001t0001g0194 a0001c0001t0004g0321	2	330	0.0061	26	c.193 others(45): Show c.193+15924_193+15949dupTTTTTTTTTTTTTTTTTTTTTTTTTT	PLCG2	ENSG00000197943.12	transcript	ENST00000564138.6	protein_coding	2/32		INFO_REALIGN_3_PRIME	chr16	TogoVar
PLCG2_chr16_81774291_81967685	81818883	A A	ATTTTTTT others(19): Show ATTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA20129.hp1 NA20129.hp1	a0001 a0001	a0001c0068 a0001c0068	a0001c0068t0033 a0001c0068t0033	a0001c0068t0033g0241 a0001c0068t0033g0241	1	330	0.0030	26	c.193 others(45): Show c.193+32725_193+32726insTTTTTTTTTTTTTTTTTTTTTTTTTT	PLCG2	ENSG00000197943.12	transcript	ENST00000564138.6	protein_coding	2/32		INFO_REALIGN_3_PRIME	chr16	TogoVar
PLCG2_chr16_81774291_81967685	81899289	T T	TATATATA others(19): Show TATATATATATATACACACACACACAC	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0043 a0001c0002t0043	a0001c0002t0043g0008 a0001c0002t0043g0008	1	330	0.0030	26	c.119 others(45): Show c.1194-1322_1194-1321insTATATATATATACACACACACACACA	PLCG2	ENSG00000197943.12	transcript	ENST00000564138.6	protein_coding	13/32		INFO_REALIGN_3_PRIME	chr16	TogoVar
PLCG2_chr16_81774291_81967685	81946381	A A	AGCATGAG others(19): Show AGCATGAGACATCATACAAGAATTCCT	intron_variant intron_variant	MODIFIER	NA19088.hp2 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0053 a0001c0001t0053	a0001c0001t0053g0192 a0001c0001t0053g0192	1	330	0.0030	26	c.357 others(43): Show c.3570+119_3570+144dupGCATGAGACATCATACAAGAATTCCT	PLCG2	ENSG00000197943.12	transcript	ENST00000564138.6	protein_coding	31/32		INFO_REALIGN_3_PRIME	chr16	TogoVar
PLCH1_chr3_155474881_155750071	155699822	T T	TCACACAC others(19): Show TCACACACACACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG01981.hp2 HG03225.hp1 HG01891.hp1 HG01981.hp2 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0010 a0001c0001t0001g0038 a0001c0001t0001g0042 a0001c0001t0001g0010 a0001c0001t0001g0038 a0001c0001t0001g0042	3	264	0.0114	26	c.79+ others(41): Show c.79+4298_79+4323dupTGTGTGTGTGTGTGTGTGTGTGTGTG	PLCH1	ENSG00000114805.18	transcript	ENST00000460012.7	protein_coding	2/22			chr3	TogoVar
PLCL1_chr2_197799593_198154863	197890701	T T	TATATATA others(19): Show TATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02451.hp1 HG02886.hp2 others(4): Show HG02145.hp1 HG02451.hp1 HG02886.hp2 HG02976.hp2 HG06807.hp1 NA18522.hp1 NA19030.hp2	a0001 a0002 a0001 a0002	a0001c0004 a0001c0005 a0002c0002 a0001c0004 a0001c0005 a0002c0002	a0001c0004t0005 a0001c0004t0025 a0001c0005t0001 others(3): Show a0001c0004t0005 a0001c0004t0025 a0001c0005t0001 a0001c0005t0010 a0002c0002t0005 a0002c0002t0009	a0001c0004t0005g0059 a0001c0004t0025g0122 a0001c0005t0001g0065 others(4): Show a0001c0004t0005g0059 a0001c0004t0025g0122 a0001c0005t0001g0065 a0001c0005t0010g0118 a0002c0002t0005g0132 a0002c0002t0009g0130 a0002c0002t0009g0131	7	204	0.0343	26	c.240 others(45): Show c.240+85363_240+85364insTATATATATATATATATATATATACA	PLCL1	ENSG00000115896.17	transcript	ENST00000428675.6	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr2	TogoVar
PLCL2_chr3_16879955_17095604	17060926	A A	AAAAATTT others(19): Show AAAAATTTTTATTTTTAATCTATACAC	intron_variant intron_variant	MODIFIER	NA18942.hp1 NA18942.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0017 a0001c0001t0001g0017	1	250	0.0040	26	c.309 others(45): Show c.3095-7019_3095-7018insTTTTAATCTATACACAAAATTTTTAT	PLCL2	ENSG00000154822.18	transcript	ENST00000615277.5	protein_coding	4/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
PLCXD3_chr5_41301952_41515601	41403394	A A	ATTTGTTT others(19): Show ATTTGTTTTTTTTTTTTTGTTTTTGTT	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG02145.hp2 HG02258.hp2 others(6): Show HG01261.hp1 HG02145.hp2 HG02258.hp2 HG02572.hp2 HG02809.hp1 HG02886.hp1 HG02886.hp2 HG02965.hp1 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0003 a0001c0001t0004 a0001c0001t0009 others(4): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0009 a0001c0001t0010 a0001c0001t0021 a0001c0001t0026 a0001c0005t0008	a0001c0001t0003g0036 a0001c0001t0003g0037 a0001c0001t0004g0170 others(6): Show a0001c0001t0003g0036 a0001c0001t0003g0037 a0001c0001t0004g0170 a0001c0001t0009g0233 a0001c0001t0010g0160 a0001c0001t0021g0232 a0001c0001t0021g0234 a0001c0001t0026g0162 a0001c0005t0008g0164	9	244	0.0369	26	c.104 others(45): Show c.104-20861_104-20860insAACAAAAACAAAAAAAAAAAAACAAA	PLCXD3	ENSG00000182836.11	transcript	ENST00000377801.8	protein_coding	1/2			chr5	TogoVar
PLCXD3_chr5_41301952_41515601	41403394	A A	ATTTGTTT others(19): Show ATTTGTTTTTTTTTTTTTTTTTTTGTT	intron_variant intron_variant	MODIFIER	HG01516.hp2 HG02970.hp2 HG03239.hp1 others(1): Show HG01516.hp2 HG02970.hp2 HG03239.hp1 NA19055.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0016 a0001c0001t0038 others(1): Show a0001c0001t0002 a0001c0001t0016 a0001c0001t0038 a0001c0001t0039	a0001c0001t0002g0034 a0001c0001t0016g0121 a0001c0001t0038g0075 others(1): Show a0001c0001t0002g0034 a0001c0001t0016g0121 a0001c0001t0038g0075 a0001c0001t0039g0090	4	244	0.0164	26	c.104 others(45): Show c.104-20861_104-20860insAACAAAAAAAAAAAAAAAAAAACAAA	PLCXD3	ENSG00000182836.11	transcript	ENST00000377801.8	protein_coding	1/2			chr5	TogoVar
PLCXD3_chr5_41301952_41515601	41403394	A A	ATTTGTTT others(19): Show ATTTGTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19010.hp1 NA19010.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0147 a0001c0001t0005g0147	1	244	0.0041	26	c.104 others(45): Show c.104-20861_104-20860insAAAAAAAAAAAAAAAAAAAAAACAAA	PLCXD3	ENSG00000182836.11	transcript	ENST00000377801.8	protein_coding	1/2			chr5	TogoVar
PLCXD3_chr5_41301952_41515601	41403398	G G	GTTTTTTT others(19): Show GTTTTTTTTTTTGTTTGTTTGTTTTTT	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01358.hp2 HG01109.hp1 HG01358.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0087 a0001c0001t0002g0182 a0001c0001t0002g0087 a0001c0001t0002g0182	2	244	0.0082	26	c.104 others(45): Show c.104-20865_104-20864insAAAAAACAAACAAACAAAAAAAAAAA	PLCXD3	ENSG00000182836.11	transcript	ENST00000377801.8	protein_coding	1/2			chr5	TogoVar
PLCXD3_chr5_41301952_41515601	41403398	G G	GTTTTTTT others(19): Show GTTTTTTTTTTTTTTTGTTTGTTTTTT	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0067 a0001c0001t0067	a0001c0001t0067g0222 a0001c0001t0067g0222	1	244	0.0041	26	c.104 others(45): Show c.104-20865_104-20864insAAAAAACAAACAAAAAAAAAAAAAAA	PLCXD3	ENSG00000182836.11	transcript	ENST00000377801.8	protein_coding	1/2			chr5	TogoVar
PLCXD3_chr5_41301952_41515601	41403398	G G	GTTTTTTT others(19): Show GTTTTTTTTTTTTTTTTTTTGTTTTTT	intron_variant intron_variant	MODIFIER	HG01257.hp2 HG01257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0110 a0001c0001t0003g0110	1	244	0.0041	26	c.104 others(45): Show c.104-20865_104-20864insAAAAAACAAAAAAAAAAAAAAAAAAA	PLCXD3	ENSG00000182836.11	transcript	ENST00000377801.8	protein_coding	1/2			chr5	TogoVar
PLCXD3_chr5_41301952_41515601	41403398	G G	GTTTTTTT others(19): Show GTTTTTTTTTTTTTTTTTTTTGTTTTT	intron_variant intron_variant	MODIFIER	NA18955.hp1 NA19057.hp2 NA18955.hp1 NA19057.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0150 a0001c0001t0005g0151 a0001c0001t0005g0150 a0001c0001t0005g0151	2	244	0.0082	26	c.104 others(45): Show c.104-20865_104-20864insAAAAACAAAAAAAAAAAAAAAAAAAA	PLCXD3	ENSG00000182836.11	transcript	ENST00000377801.8	protein_coding	1/2			chr5	TogoVar
PLCXD3_chr5_41301952_41515601	41403399	T T	TTTTTTTT others(19): Show TTTTTTTTTTTTTTTTGTTTGTTTTTG	intron_variant intron_variant	MODIFIER	NA19063.hp1 NA19063.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0032 a0001c0001t0032	a0001c0001t0032g0132 a0001c0001t0032g0132	1	244	0.0041	26	c.104 others(45): Show c.104-20866_104-20865insCAAAAACAAACAAAAAAAAAAAAAAA	PLCXD3	ENSG00000182836.11	transcript	ENST00000377801.8	protein_coding	1/2			chr5	TogoVar
PLCXD3_chr5_41301952_41515601	41403408	T T	TTTTTTTT others(19): Show TTTTTTTTTTTTTTTTGTTTTTTTTTA	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00642.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0056 a0001c0001t0056	a0001c0001t0056g0203 a0001c0001t0056g0203	1	244	0.0041	26	c.104 others(45): Show c.104-20875_104-20874insTAAAAAAAAACAAAAAAAAAAAAAAA	PLCXD3	ENSG00000182836.11	transcript	ENST00000377801.8	protein_coding	1/2			chr5	TogoVar
PLCZ1_chr12_18678180_18743012	18696322	C C	CTATATAT others(19): Show CTATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG01928.hp2 HG01993.hp2 others(21): Show HG01175.hp2 HG01928.hp2 HG01993.hp2 HG02040.hp2 HG02055.hp1 HG02132.hp1 HG02615.hp1 HG02647.hp1 HG02818.hp2 HG03017.hp2 HG03225.hp2 HG03927.hp2 NA18522.hp1 NA18522.hp2 NA18949.hp1 NA18951.hp2 NA18953.hp2 NA18971.hp2 NA18978.hp1 NA18986.hp1 NA19007.hp2 NA19068.hp2 NA19076.hp2 NA19240.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0001 a0001c0002t0001 a0002c0003t0001 a0001c0001t0001 a0001c0002t0001 a0002c0003t0001	a0001c0001t0001g0012 a0001c0001t0001g0026 a0001c0001t0001g0027 others(21): Show a0001c0001t0001g0012 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0059 a0001c0001t0001g0187 a0001c0001t0001g0208 a0001c0001t0001g0211 a0001c0001t0001g0216 a0001c0001t0001g0218 a0001c0001t0001g0226 a0001c0001t0001g0237 a0001c0001t0001g0241 a0001c0001t0001g0243 a0001c0001t0001g0247 a0001c0001t0001g0261 a0001c0001t0001g0267 a0001c0001t0001g0276 a0001c0001t0001g0304 a0001c0002t0001g0295 a0002c0003t0001g0070	24	326	0.0736	26	c.117 others(41): Show c.1175-82_1175-57dupTATATATATATATATATATATATATA	PLCZ1	ENSG00000139151.16	transcript	ENST00000266505.12	protein_coding	10/14			chr12	TogoVar
PLD1_chr3_171595404_171815483	171620742	C C	CTCTCTAT others(19): Show CTCTCTATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0005 a0002c0003t0005	a0002c0003t0005g0102 a0002c0003t0005g0102	1	294	0.0034	26	c.259 others(43): Show c.2594-223_2594-222insTATATATATATATATATATATAGAGA	PLD1	ENSG00000075651.17	transcript	ENST00000351298.9	protein_coding	23/26			chr3	TogoVar
PLD1_chr3_171595404_171815483	171639264	A A	AATATATA others(19): Show AATATATAAATATATCATATATTATCT	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG03130.hp1 HG03453.hp1 HG01884.hp1 HG03130.hp1 HG03453.hp1	a0006 a0012 a0006 a0012	a0006c0014 a0012c0023 a0006c0014 a0012c0023	a0006c0014t0011 a0012c0023t0011 a0006c0014t0011 a0012c0023t0011	a0006c0014t0011g0117 a0006c0014t0011g0180 a0012c0023t0011g0079 a0006c0014t0011g0117 a0006c0014t0011g0180 a0012c0023t0011g0079	3	294	0.0102	26	c.259 others(45): Show c.2593+3550_2593+3575dupAGATAATATATGATATATTTATATAT	PLD1	ENSG00000075651.17	transcript	ENST00000351298.9	protein_coding	23/26			chr3	TogoVar
PLD1_chr3_171595404_171815483	171639848	C C	CTCTCTCT others(19): Show CTCTCTCTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG03139.hp1 HG02895.hp1 HG03139.hp1	a0004 a0004	a0004c0008 a0004c0008	a0004c0008t0004 a0004c0008t0004	a0004c0008t0004g0174 a0004c0008t0004g0248 a0004c0008t0004g0174 a0004c0008t0004g0248	2	294	0.0068	26	c.259 others(45): Show c.2593+2991_2593+2992insTATATATATATATATATATAGAGAGA	PLD1	ENSG00000075651.17	transcript	ENST00000351298.9	protein_coding	23/26			chr3	TogoVar
PLD1_chr3_171595404_171815483	171639848	C C	CTCTCTCT others(19): Show CTCTCTCTCTATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0004 a0004	a0004c0008 a0004c0008	a0004c0008t0004 a0004c0008t0004	a0004c0008t0004g0208 a0004c0008t0004g0208	1	294	0.0034	26	c.259 others(45): Show c.2593+2991_2593+2992insTATATATATATATATATAGAGAGAGA	PLD1	ENSG00000075651.17	transcript	ENST00000351298.9	protein_coding	23/26			chr3	TogoVar
PLD1_chr3_171595404_171815483	171710872	C C	CTTTTTTT others(19): Show CTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG02717.hp1 HG03209.hp1 others(1): Show HG00423.hp2 HG02717.hp1 HG03209.hp1 NA18962.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0003 a0002c0003t0003	a0002c0003t0003g0031 a0002c0003t0003g0072 a0002c0003t0003g0173 others(1): Show a0002c0003t0003g0031 a0002c0003t0003g0072 a0002c0003t0003g0173 a0002c0003t0003g0289	4	294	0.0136	26	c.912 others(43): Show c.912-1164_912-1163insAAAAAAAAAAAAAAAAAAAAAAAAAA	PLD1	ENSG00000075651.17	transcript	ENST00000351298.9	protein_coding	9/26			chr3	TogoVar
PLD5_chr1_242077986_242529697	242081628	T T	TACACACA others(19): Show TACACACACACACACACACACACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0024 a0001c0002t0024	a0001c0002t0024g0150 a0001c0002t0024g0150	1	188	0.0053	26	c.82 others(37): Show c.8225_*8226insGTGTGTGTGTGTGTGTGTGTGTGTGT	PLD5	ENSG00000180287.17	transcript	ENST00000536534.7	protein_coding		1357		chr1	TogoVar
PLD5_chr1_242077986_242529697	242112334	T T	TAGATAGA others(19): Show TAGATAGATAGATAGATAGATAGATAG	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0037 a0001c0001t0001g0037	1	188	0.0053	26	c.107 others(45): Show c.1070+1555_1070+1556insCTATCTATCTATCTATCTATCTATCT	PLD5	ENSG00000180287.17	transcript	ENST00000536534.7	protein_coding	7/9			chr1	TogoVar
PLD5_chr1_242077986_242529697	242112339	G G	GTGTGTAT others(19): Show GTGTGTATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG03942.hp2 HG04184.hp1 HG01168.hp1 HG03942.hp2 HG04184.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0007 a0001c0001t0040 a0001c0002t0009 a0001c0001t0007 a0001c0001t0040 a0001c0002t0009	a0001c0001t0007g0048 a0001c0001t0040g0013 a0001c0002t0009g0169 a0001c0001t0007g0048 a0001c0001t0040g0013 a0001c0002t0009g0169	3	188	0.0160	26	c.107 others(45): Show c.1070+1550_1070+1551insTATATATATATATATATATATACACA	PLD5	ENSG00000180287.17	transcript	ENST00000536534.7	protein_coding	7/9			chr1	TogoVar
PLD5_chr1_242077986_242529697	242162710	A A	AAAAAGCT others(19): Show AAAAAGCTACGAGAAGTTTTTCCCTGG	intron_variant intron_variant	MODIFIER	HG01981.hp2 HG02258.hp2 HG02886.hp2 HG01981.hp2 HG02258.hp2 HG02886.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0029 a0001c0001t0049 a0001c0002t0058 a0001c0001t0029 a0001c0001t0049 a0001c0002t0058	a0001c0001t0029g0033 a0001c0001t0049g0120 a0001c0002t0058g0151 a0001c0001t0029g0033 a0001c0001t0049g0120 a0001c0002t0058g0151	3	188	0.0160	26	c.736 others(45): Show c.736-38071_736-38046dupCCAGGGAAAAACTTCTCGTAGCTTTT	PLD5	ENSG00000180287.17	transcript	ENST00000536534.7	protein_coding	5/9			chr1	TogoVar
PLD5_chr1_242077986_242529697	242207836	A A	ATATTTAT others(19): Show ATATTTATATATATTTTTATATATATT	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0078 a0001c0001t0078	a0001c0001t0078g0183 a0001c0001t0078g0183	1	188	0.0053	26	c.735 others(45): Show c.735+12151_735+12152insAATATATATAAAAATATATATAAATA	PLD5	ENSG00000180287.17	transcript	ENST00000536534.7	protein_coding	5/9			chr1	TogoVar
PLD5_chr1_242077986_242529697	242393478	G G	GTATATAT others(19): Show GTATATATATGAGTATATATATGTGTA	intron_variant intron_variant	MODIFIER	NA19090.hp1 NA19090.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0009 a0001c0002t0009	a0001c0002t0009g0165 a0001c0002t0009g0165	1	188	0.0053	26	c.190 others(45): Show c.190-45237_190-45236insTACACATATATATACTCATATATATA	PLD5	ENSG00000180287.17	transcript	ENST00000536534.7	protein_coding	1/9			chr1	TogoVar
PLEKHA2_chr8_38896346_38978912	38933790	A A	AAAAAAAA others(19): Show AAAAAAAAAAAAAAAAAAAAAAAAAAG	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00733.hp2 HG01071.hp2 others(13): Show HG00642.hp2 HG00733.hp2 HG01071.hp2 HG01123.hp1 HG02258.hp2 HG02572.hp2 HG02630.hp1 HG02886.hp1 HG03209.hp2 HG03239.hp2 HG03491.hp2 HG03516.hp2 NA18940.hp1 NA18985.hp1 NA19009.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0007 a0001c0001t0016 a0001c0001t0021 a0001c0001t0023 a0001c0001t0025 a0001c0001t0028 a0001c0001t0035	a0001c0001t0001g0049 a0001c0001t0001g0084 a0001c0001t0001g0202 others(13): Show a0001c0001t0001g0049 a0001c0001t0001g0084 a0001c0001t0001g0202 a0001c0001t0002g0007 a0001c0001t0002g0070 a0001c0001t0003g0215 a0001c0001t0003g0349 a0001c0001t0005g0192 a0001c0001t0005g0301 a0001c0001t0007g0161 a0001c0001t0016g0004 a0001c0001t0021g0186 a0001c0001t0023g0360 a0001c0001t0025g0013 a0001c0001t0028g0155 a0001c0001t0035g0183	16	376	0.0426	26	c.142 others(43): Show c.142-2200_142-2199insAAAAAAAAAAAAAAAAAAAAAGAAAA	PLEKHA2	ENSG00000169499.15	transcript	ENST00000617275.5	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr8	TogoVar
PLEKHA4_chr19_48832097_48873617	48858627	C C	CAAAAAAA others(19): Show CAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18966.hp2 NA18966.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0012 a0002c0002t0012	a0002c0002t0012g0017 a0002c0002t0012g0017	1	300	0.0033	26	c.972 others(41): Show c.972+232_972+233insTTTTTTTTTTTTTTTTTTTTTTTTTT	PLEKHA4	ENSG00000105559.13	transcript	ENST00000263265.11	protein_coding	8/19			chr19	TogoVar
PLEKHA5_chr12_19124733_19381400	19167405	A A	ATTTTTTT others(19): Show ATTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03710.hp2 HG03710.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0111 a0001c0001t0007g0111	1	316	0.0032	26	c.227 others(45): Show c.227+34959_227+34984dupTTTTTTTTTTTTTTTTTTTTTTTTTT	PLEKHA5	ENSG00000052126.17	transcript	ENST00000429027.7	protein_coding	3/31		INFO_REALIGN_3_PRIME	chr12	TogoVar
PLEKHA5_chr12_19124733_19381400	19253064	C C	CTTTTTTT others(19): Show CTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG02280.hp1 HG02895.hp2 others(2): Show HG01069.hp1 HG02280.hp1 HG02895.hp2 NA18957.hp2 NA19084.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0001 a0001c0001t0004 a0001c0001t0005	a0001c0001t0001g0173 a0001c0001t0004g0163 a0001c0001t0004g0165 others(2): Show a0001c0001t0001g0173 a0001c0001t0004g0163 a0001c0001t0004g0165 a0001c0001t0005g0073 a0001c0001t0005g0149	5	316	0.0158	26	c.228 others(41): Show c.228-875_228-850dupTTTTTTTTTTTTTTTTTTTTTTTTTT	PLEKHA5	ENSG00000052126.17	transcript	ENST00000429027.7	protein_coding	3/31		INFO_REALIGN_3_PRIME	chr12	TogoVar
PLEKHA5_chr12_19124733_19381400	19334829	A A	AAAAAAAA others(19): Show AAAAAAAAAAAAAAAAAAAATATATAT	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG03688.hp1 NA18962.hp1 HG00323.hp2 HG03688.hp1 NA18962.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0156 a0001c0001t0004g0176 a0001c0001t0004g0185 a0001c0001t0004g0156 a0001c0001t0004g0176 a0001c0001t0004g0185	3	316	0.0095	26	c.244 others(45): Show c.2449-1685_2449-1684insAAAAAAAAAAAAAAAAAATATATATA	PLEKHA5	ENSG00000052126.17	transcript	ENST00000429027.7	protein_coding	20/31		INFO_REALIGN_3_PRIME	chr12	TogoVar
PLEKHA5_chr12_19124733_19381400	19334829	A A	AAAAAAAA others(19): Show AAAAAAAAAAAAAAAAAATATATATAT	intron_variant intron_variant	MODIFIER	NA19084.hp2 NA19084.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0136 a0001c0001t0002g0136	1	316	0.0032	26	c.244 others(45): Show c.2449-1685_2449-1684insAAAAAAAAAAAAAAAATATATATATA	PLEKHA5	ENSG00000052126.17	transcript	ENST00000429027.7	protein_coding	20/31		INFO_REALIGN_3_PRIME	chr12	TogoVar
PLEKHA5_chr12_19124733_19381400	19334829	A A	AAAAAAAA others(19): Show AAAAAAAAAAAATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03688.hp2 HG03688.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0052 a0001c0001t0002g0052	1	316	0.0032	26	c.244 others(45): Show c.2449-1685_2449-1684insAAAAAAAAAATATATATATATATATA	PLEKHA5	ENSG00000052126.17	transcript	ENST00000429027.7	protein_coding	20/31		INFO_REALIGN_3_PRIME	chr12	TogoVar
PLEKHA7_chr11_16772297_17019414	16892432	G G	GTGTGTGT others(19): Show GTGTGTGTGTTTTGTTTTGTTTTGTTT	intron_variant intron_variant	MODIFIER	NA19010.hp1 NA19010.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0013 a0001c0001t0002g0013	1	244	0.0041	26	c.222 others(45): Show c.222-21251_222-21250insAAACAAAACAAAACAAAACACACACA	PLEKHA7	ENSG00000166689.18	transcript	ENST00000531066.6	protein_coding	3/26			chr11	TogoVar
PLEKHA7_chr11_16772297_17019414	17015877	C C	CCATACAC others(19): Show CCATACACACACACACACACACACACA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01261.hp1 HG01934.hp1 HG03834.hp1 others(2): Show HG01261.hp1 HG01934.hp1 HG03834.hp1 NA19010.hp1 NA19010.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0003 a0001c0002t0002 a0001c0001t0002 a0001c0001t0003 a0001c0002t0002	a0001c0001t0002g0011 a0001c0001t0002g0013 a0001c0001t0002g0068 others(2): Show a0001c0001t0002g0011 a0001c0001t0002g0013 a0001c0001t0002g0068 a0001c0001t0003g0001 a0001c0002t0002g0059	5	244	0.0205	26	c.-14 others(37): Show c.-1477_-1476insTGTGTGTGTGTGTGTGTGTGTGTATG	PLEKHA7	ENSG00000166689.18	transcript	ENST00000531066.6	protein_coding		1464		chr11	TogoVar
PLEKHA8_chr7_30023412_30089650	30073563	T T	TAAAAAAA others(19): Show TAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG06807.hp1 HG06807.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0006	a0001c0002t0006g0017 a0001c0002t0006g0017	1	234	0.0043	26	c.130 others(43): Show c.1301-507_1301-482dupAAAAAAAAAAAAAAAAAAAAAAAAAA	PLEKHA8	ENSG00000106086.21	transcript	ENST00000449726.6	protein_coding	12/13		INFO_REALIGN_3_PRIME	chr7	TogoVar
PLEKHF1_chr19_29660461_29680477	29661043	T T	TACACACA others(19): Show TACACACACACACACACACACACACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18942.hp1 NA18942.hp2 NA18942.hp1 NA18942.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0001 a0001c0001t0002g0007 a0001c0001t0001g0001 a0001c0001t0002g0007	2	440	0.0046	26	c.-44 others(37): Show c.-4479_-4478insACACACACACACACACACACACACAC	PLEKHF1	ENSG00000166289.6	transcript	ENST00000436066.4	protein_coding		4417		chr19	TogoVar
PLEKHG1_chr6_150594885_150848665	150628575	C C	CACACACA others(19): Show CACACACACACACACACACACACACAT	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG01071.hp2 HG02293.hp2 others(1): Show HG00544.hp2 HG01071.hp2 HG02293.hp2 HG02976.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0007 a0001c0013 others(1): Show a0001c0001 a0001c0007 a0001c0013 a0003c0011	a0001c0001t0005 a0001c0007t0003 a0001c0013t0001 others(1): Show a0001c0001t0005 a0001c0007t0003 a0001c0013t0001 a0003c0011t0002	a0001c0001t0005g0204 a0001c0007t0003g0027 a0001c0013t0001g0209 others(1): Show a0001c0001t0005g0204 a0001c0007t0003g0027 a0001c0013t0001g0209 a0003c0011t0002g0023	4	272	0.0147	26	c.-15 others(47): Show c.-157-22151_-157-22150insACACACACACACACACACACACAT AC	PLEKHG1	ENSG00000120278.17	transcript	ENST00000696526.1	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr6	TogoVar
PLEKHG1_chr6_150594885_150848665	150674682	T T	TCTCTCTC others(19): Show TCTCTCTCTCTCTCTCTCTCTCTCTCC	intron_variant intron_variant	MODIFIER	NA19000.hp1 NA19000.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0006	a0001c0002t0006g0270 a0001c0002t0006g0270	1	272	0.0037	26	c.-99 others(45): Show c.-99+23897_-99+23898insTCTCTCTCTCTCTCTCTCTCTCTCCC	PLEKHG1	ENSG00000120278.17	transcript	ENST00000696526.1	protein_coding	2/16		INFO_REALIGN_3_PRIME	chr6	TogoVar
PLEKHG1_chr6_150594885_150848665	150804155	T T	TTATATAT others(19): Show TTATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02135.hp2 HG02135.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0103 a0001c0002t0001g0103	1	272	0.0037	26	c.781 others(41): Show c.781-434_781-433insATATATATATATATATATATATATAT	PLEKHG1	ENSG00000120278.17	transcript	ENST00000696526.1	protein_coding	7/16		INFO_REALIGN_3_PRIME	chr6	TogoVar
PLEKHG1_chr6_150594885_150848665	150804175	A A	ATATATAT others(19): Show ATATATATATATATATATATATATATT	intron_variant intron_variant	MODIFIER	NA18977.hp1 NA18977.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0269 a0001c0002t0001g0269	1	272	0.0037	26	c.781 others(41): Show c.781-434_781-433insATATATATATATATATATATATATTT	PLEKHG1	ENSG00000120278.17	transcript	ENST00000696526.1	protein_coding	7/16		INFO_REALIGN_3_PRIME	chr6	TogoVar
PLEKHG1_chr6_150594885_150848665	150804175	A A	ATATATAT others(19): Show ATATATATATATATATATATATATTTT	intron_variant intron_variant	MODIFIER	NA18945.hp2 NA18945.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0108 a0001c0002t0001g0108	1	272	0.0037	26	c.781 others(41): Show c.781-434_781-433insATATATATATATATATATATATTTTT	PLEKHG1	ENSG00000120278.17	transcript	ENST00000696526.1	protein_coding	7/16		INFO_REALIGN_3_PRIME	chr6	TogoVar
PLEKHG3_chr14_64699424_64755249	64751927	C C	CAAAAAAA others(19): Show CAAAAAAAAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0016 a0002c0004t0016	a0002c0004t0016g0016 a0002c0004t0016g0016	1	248	0.0040	26	c.82 others(37): Show c.8224_*8225insAAAAAAAAAAAAAAAAAAAAAAAAAA	PLEKHG3	ENSG00000126822.18	transcript	ENST00000247226.13	protein_coding		1679		chr14	TogoVar
PLEKHG4B_chr5_87168_194966	164894	A A	ACACTAAT others(19): Show ACACTAATGCTCTGACGGGGCGGGGCT	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG02451.hp1 HG02818.hp1 others(6): Show HG01261.hp2 HG02451.hp1 HG02818.hp1 HG02896.hp2 HG03041.hp1 HG03579.hp1 NA18906.hp2 NA19012.hp1 NA19068.hp1	a0006 a0010 a0012 others(3): Show a0006 a0010 a0012 a0013 a0016 a0022	a0006c0070 a0006c0073 a0010c0014 others(5): Show a0006c0070 a0006c0073 a0010c0014 a0012c0013 a0013c0020 a0013c0067 a0016c0018 a0022c0046	a0006c0070t0054 a0006c0073t0020 a0010c0014t0057 others(6): Show a0006c0070t0054 a0006c0073t0020 a0010c0014t0057 a0012c0013t0133 a0013c0020t0050 a0013c0020t0052 a0013c0067t0046 a0016c0018t0034 a0022c0046t0047	a0006c0070t0054g0207 a0006c0073t0020g0193 a0010c0014t0057g0197 others(6): Show a0006c0070t0054g0207 a0006c0073t0020g0193 a0010c0014t0057g0197 a0012c0013t0133g0118 a0013c0020t0050g0182 a0013c0020t0052g0183 a0013c0067t0046g0186 a0016c0018t0034g0004 a0022c0046t0047g0180	9	210	0.0429	26	c.347 others(45): Show c.3476+1349_3476+1350insTAATGCTCTGACGGGGCGGGGCTCAC	PLEKHG4B	ENSG00000153404.15	transcript	ENST00000637938.2	protein_coding	13/19		INFO_REALIGN_3_PRIME	chr5	TogoVar

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