Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CDH12_chr5_21745673_22858344	22489056	C C	CTTTTTTT others(19): Show CTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG03195.hp2 HG03579.hp2 HG02886.hp1 HG03195.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0015 a0001c0001t0001 a0001c0002t0015	a0001c0001t0001g0027 a0001c0001t0001g0047 a0001c0002t0015g0032 a0001c0001t0001g0027 a0001c0001t0001g0047 a0001c0002t0015g0032	3	60	0.0500	26	c.-42 others(47): Show c.-428+16213_-428+16214insAAAAAAAAAAAAAAAAAAAAAAAA AA	CDH12	ENSG00000154162.15	transcript	ENST00000382254.6	protein_coding	2/14			chr5	TogoVar
CDH12_chr5_21745673_22858344	22532350	G G	GATATATA others(19): Show GATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG02258.hp2 NA21309.hp1 HG00639.hp1 HG02258.hp2 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0001 a0001c0002t0004 a0002c0003t0001 a0001c0001t0001 a0001c0002t0004 a0002c0003t0001	a0001c0001t0001g0043 a0001c0002t0004g0040 a0002c0003t0001g0026 a0001c0001t0001g0043 a0001c0002t0004g0040 a0002c0003t0001g0026	3	60	0.0500	26	c.-52 others(47): Show c.-522-27012_-522-26987dupATATATATATATATATATATATAT AT	CDH12	ENSG00000154162.15	transcript	ENST00000382254.6	protein_coding	1/14			chr5	TogoVar
CDH12_chr5_21745673_22858344	22675870	C C	CATATATA others(19): Show CATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00639.hp1 HG01070.hp2 others(8): Show HG00558.hp1 HG00639.hp1 HG01070.hp2 HG01361.hp1 HG02572.hp1 HG02572.hp2 HG02622.hp2 HG03209.hp1 HG03669.hp1 NA20129.hp2 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0008 others(2): Show a0001c0001 a0001c0002 a0001c0008 a0002c0003 a0002c0004	a0001c0001t0002 a0001c0002t0004 a0001c0002t0007 others(7): Show a0001c0001t0002 a0001c0002t0004 a0001c0002t0007 a0001c0002t0027 a0001c0008t0002 a0002c0003t0002 a0002c0004t0003 a0002c0004t0004 a0002c0004t0006 a0002c0004t0012	a0001c0001t0002g0021 a0001c0002t0004g0002 a0001c0002t0004g0040 others(8): Show a0001c0001t0002g0021 a0001c0002t0004g0002 a0001c0002t0004g0040 a0001c0002t0007g0001 a0001c0002t0027g0036 a0001c0008t0002g0039 a0002c0003t0002g0011 a0002c0004t0003g0016 a0002c0004t0004g0033 a0002c0004t0006g0037 a0002c0004t0012g0020	11	60	0.1833	26	c.-52 others(49): Show c.-522-170507_-522-170506insATATATATATATATATATATAT ATAT	CDH12	ENSG00000154162.15	transcript	ENST00000382254.6	protein_coding	1/14			chr5	TogoVar
CDH12_chr5_21745673_22858344	22819988	C C	CATATACA others(19): Show CATATACATATATATACATATACATAT	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG01358.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0003 a0002c0004t0003	a0002c0004t0003g0023 a0002c0004t0003g0023	1	60	0.0167	26	c.-52 others(47): Show c.-523+33044_-523+33069dupATATGTATATGTATATATATGTAT AT	CDH12	ENSG00000154162.15	transcript	ENST00000382254.6	protein_coding	1/14			chr5	TogoVar
CDH13_chr16_82621969_83805640	82638823	T T	TGTGTGTG others(19): Show TGTGTGTGTGTGTGTGTGTGTGCGCGC	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG03041.hp2 HG03453.hp2 HG02622.hp2 HG03041.hp2 HG03453.hp2	a0001 a0001	a0001c0002 a0001c0005 a0001c0006 a0001c0002 a0001c0005 a0001c0006	a0001c0002t0006 a0001c0005t0039 a0001c0006t0006 a0001c0002t0006 a0001c0005t0039 a0001c0006t0006	a0001c0002t0006g0027 a0001c0005t0039g0017 a0001c0006t0006g0069 a0001c0002t0006g0027 a0001c0005t0039g0017 a0001c0006t0006g0069	3	110	0.0273	26	c.45+ others(43): Show c.45+11687_45+11688insTGTGTGTGTGTGTGTGTGTGCGCGCG	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	82638823	T T	TGTGTGTG others(19): Show TGTGTGTGTGTGTGTGTGTGTGTGCGC	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG02451.hp2 HG03041.hp1 HG01433.hp1 HG02451.hp2 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0009 a0001c0001t0036 a0001c0002t0001 a0001c0001t0009 a0001c0001t0036 a0001c0002t0001	a0001c0001t0009g0047 a0001c0001t0036g0002 a0001c0002t0001g0011 a0001c0001t0009g0047 a0001c0001t0036g0002 a0001c0002t0001g0011	3	110	0.0273	26	c.45+ others(43): Show c.45+11687_45+11688insTGTGTGTGTGTGTGTGTGTGTGCGCG	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	82787841	A A	AGTGTGTG others(19): Show AGTGTGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00597.hp2 HG00738.hp1 others(15): Show HG00323.hp1 HG00597.hp2 HG00738.hp1 HG01081.hp1 HG01099.hp1 HG01168.hp1 HG01255.hp2 HG01257.hp2 HG01258.hp2 HG01261.hp1 HG01884.hp2 HG02698.hp1 HG03041.hp1 HG03098.hp2 HG03139.hp2 HG03942.hp2 NA18522.hp1 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0002c0012	a0001c0001t0007 a0001c0001t0026 a0001c0001t0028 others(12): Show a0001c0001t0007 a0001c0001t0026 a0001c0001t0028 a0001c0001t0033 a0001c0001t0036 a0001c0001t0045 a0001c0002t0001 a0001c0002t0002 a0001c0002t0021 a0001c0003t0001 a0001c0003t0032 a0001c0004t0003 a0001c0004t0004 a0001c0004t0042 a0002c0012t0002	a0001c0001t0007g0041 a0001c0001t0026g0070 a0001c0001t0028g0038 others(15): Show a0001c0001t0007g0041 a0001c0001t0026g0070 a0001c0001t0028g0038 a0001c0001t0033g0049 a0001c0001t0036g0002 a0001c0001t0045g0065 a0001c0002t0001g0025 a0001c0002t0001g0059 a0001c0002t0001g0097 a0001c0002t0002g0032 a0001c0002t0002g0043 a0001c0002t0021g0008 a0001c0003t0001g0004 a0001c0003t0032g0060 a0001c0004t0003g0096 a0001c0004t0004g0083 a0001c0004t0042g0061 a0002c0012t0002g0019	18	110	0.1636	26	c.46- others(43): Show c.46-70510_46-70509insTGTGTGTGTGTGTGTGTGTGTGTGTG	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	83216427	T T	TATATATA others(19): Show TATATATATATATATATATATATATAA	intron_variant intron_variant	MODIFIER	HG01168.hp2 HG01257.hp1 HG01258.hp2 HG01168.hp2 HG01257.hp1 HG01258.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0003 a0001c0002t0001 a0001c0001t0002 a0001c0001t0003 a0001c0002t0001	a0001c0001t0002g0045 a0001c0001t0003g0085 a0001c0002t0001g0097 a0001c0001t0002g0045 a0001c0001t0003g0085 a0001c0002t0001g0097	3	110	0.0273	26	c.484 others(41): Show c.484-901_484-900insTATATATAAATATATATATATATATA	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	4/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	83379938	T T	TATATAGA others(19): Show TATATAGAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02698.hp1 HG02698.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0032 a0001c0002t0002g0032	1	110	0.0091	26	c.781 others(45): Show c.781+34933_781+34934insTATAGAGAGAGAGAGAGAGAGAGAGA	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	6/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	83379938	T T	TATATATA others(19): Show TATATATATAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG01169.hp1 HG03098.hp2 HG03239.hp1 others(1): Show HG01169.hp1 HG03098.hp2 HG03239.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0033	a0001c0001t0001g0095 a0001c0001t0002g0076 a0001c0001t0003g0086 others(1): Show a0001c0001t0001g0095 a0001c0001t0002g0076 a0001c0001t0003g0086 a0001c0001t0033g0049	4	110	0.0364	26	c.781 others(45): Show c.781+34933_781+34934insTATATATAGAGAGAGAGAGAGAGAGA	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	6/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	83379938	T T	TATATATA others(19): Show TATATATATATAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0006	a0001c0002t0006g0037 a0001c0002t0006g0037	1	110	0.0091	26	c.781 others(45): Show c.781+34933_781+34934insTATATATATAGAGAGAGAGAGAGAGA	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	6/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	83379938	T T	TATATATA others(19): Show TATATATATATATATATAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0015 a0001c0008t0015	a0001c0008t0015g0048 a0001c0008t0015g0048	1	110	0.0091	26	c.781 others(45): Show c.781+34933_781+34934insTATATATATATATATAGAGAGAGAGA	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	6/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	83379938	T T	TATATATA others(19): Show TATATATATATATATATATAGAGAGAG	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03491.hp1 HG03139.hp2 HG03491.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0018 a0001c0004t0004 a0001c0001t0018 a0001c0004t0004	a0001c0001t0018g0072 a0001c0004t0004g0083 a0001c0001t0018g0072 a0001c0004t0004g0083	2	110	0.0182	26	c.781 others(45): Show c.781+34933_781+34934insTATATATATATATATATAGAGAGAGA	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	6/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	83570946	C C	CATATATA others(19): Show CATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02717.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0089 a0001c0001t0002g0089	1	110	0.0091	26	c.961 others(45): Show c.961-31483_961-31482insTATATATATATATATATATATATATA	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	7/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH15_chr16_89166748_89200492	89180974	C C	CTTTTTTT others(19): Show CTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG03453.hp2 HG03486.hp1 others(1): Show HG02109.hp1 HG03453.hp2 HG03486.hp1 NA20129.hp2	a0003 a0004 a0003 a0004	a0003c0009 a0004c0019 a0003c0009 a0004c0019	a0003c0009t0001 a0004c0019t0005 a0003c0009t0001 a0004c0019t0005	a0003c0009t0001g0018 a0004c0019t0005g0301 a0003c0009t0001g0018 a0004c0019t0005g0301	4	406	0.0099	26	c.357 others(41): Show c.357+632_357+633insTTTTTTTTTTTTTTTTTTTTTTTTTT	CDH15	ENSG00000129910.8	transcript	ENST00000289746.3	protein_coding	3/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH16_chr16_66903122_66923885	66921293	T T	TCTGGTTG others(19): Show TCTGGTTGTGAGACCCAGGGTTCCTGC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00544.hp2 HG00544.hp2	a0008 a0008	a0008c0017 a0008c0017	a0008c0017t0001 a0008c0017t0001	a0008c0017t0001g0078 a0008c0017t0001g0078	1	386	0.0026	26	c.-25 others(37): Show c.-2504_-2503insGCAGGAACCCTGGGTCTCACAACCAG	CDH16	ENSG00000166589.13	transcript	ENST00000299752.9	protein_coding		2409		chr16	TogoVar
CDH17_chr8_94122162_94213555	94168143	T T	TACGTATA others(19): Show TACGTATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0001	a0001c0005t0001g0211 a0001c0005t0001g0211	1	338	0.0030	26	c.106 others(45): Show c.1067-2168_1067-2167insGTATATATATATATATATATATACGT	CDH17	ENSG00000079112.10	transcript	ENST00000027335.8	protein_coding	9/17			chr8	TogoVar
CDH18_chr5_19466296_19993200	19748112	C C	CAAAAAAA others(19): Show CAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03139.hp2 NA18906.hp2 HG03139.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0069 a0001c0001t0003g0008 a0001c0001t0001g0069 a0001c0001t0003g0008	2	138	0.0145	26	c.229 others(41): Show c.229-877_229-876insTTTTTTTTTTTTTTTTTTTTTTTTTT	CDH18	ENSG00000145526.12	transcript	ENST00000382275.6	protein_coding	3/12			chr5	TogoVar
CDH18_chr5_19466296_19993200	19755452	T T	TATATATA others(19): Show TATATATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01433.hp1 HG01884.hp2 others(2): Show HG01074.hp2 HG01433.hp1 HG01884.hp2 HG02922.hp1 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0007 a0001c0001t0001 a0001c0001t0007	a0001c0001t0001g0066 a0001c0001t0001g0085 a0001c0001t0001g0105 others(2): Show a0001c0001t0001g0066 a0001c0001t0001g0085 a0001c0001t0001g0105 a0001c0001t0001g0131 a0001c0001t0007g0065	5	138	0.0362	26	c.229 others(43): Show c.229-8217_229-8216insGTGTATATATATATATATATATATAT	CDH18	ENSG00000145526.12	transcript	ENST00000382275.6	protein_coding	3/12			chr5	TogoVar
CDH18_chr5_19466296_19993200	19903541	G G	GTATATAT others(19): Show GTATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03669.hp2 HG03669.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0036 a0001c0001t0001g0036	1	138	0.0073	26	c.-25 others(47): Show c.-256-64300_-256-64299insTATATATATATATATATATATATA TA	CDH18	ENSG00000145526.12	transcript	ENST00000382275.6	protein_coding	2/12			chr5	TogoVar
CDH19_chr18_66496083_66609090	66524569	T T	TATATATA others(19): Show TATATATATATATATATATATATATAA	intron_variant intron_variant	MODIFIER	HG02155.hp2 HG02155.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0004	a0001c0003t0004g0349 a0001c0003t0004g0349	1	354	0.0028	26	c.145 others(45): Show c.1458+5275_1458+5276insTTATATATATATATATATATATATAT	CDH19	ENSG00000071991.9	transcript	ENST00000262150.7	protein_coding	9/11			chr18	TogoVar
CDH19_chr18_66496083_66609090	66532489	T T	TACACACA others(19): Show TACACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0099 a0001c0001t0011g0099	1	354	0.0028	26	c.133 others(45): Show c.1336+2471_1336+2496dupGTGTGTGTGTGTGTGTGTGTGTGTGT	CDH19	ENSG00000071991.9	transcript	ENST00000262150.7	protein_coding	8/11			chr18	TogoVar
CDH19_chr18_66496083_66609090	66588605	C C	CATATATA others(19): Show CATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA20805.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0289 a0001c0001t0002g0289	1	354	0.0028	26	c.-11 others(47): Show c.-113+15348_-113+15349insATATATATATATATATATATATAT AT	CDH19	ENSG00000071991.9	transcript	ENST00000262150.7	protein_coding	1/11			chr18	TogoVar
CDH19_chr18_66496083_66609090	66604973	G G	GCATACAC others(19): Show GCATACACATACATGTGCACACACATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00733.hp1 HG00733.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0165 a0001c0001t0004g0165	1	354	0.0028	26	c.-11 others(37): Show c.-1133_-1132insTATGTGTGTGCACATGTATGTGTATG	CDH19	ENSG00000071991.9	transcript	ENST00000262150.7	protein_coding		884		chr18	TogoVar
CDH20_chr18_61328430_61560779	61528446	G G	GACACACA others(19): Show GACACACATACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG03669.hp1 HG03669.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0010 a0001c0002t0010	a0001c0002t0010g0210 a0001c0002t0010g0210	1	280	0.0036	26	c.127 others(43): Show c.1271+233_1271+234insTACACACACACACACACACACACACA	CDH20	ENSG00000101542.10	transcript	ENST00000262717.9	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CDH22_chr20_46168739_46313498	46223727	C C	CTTTCTTT others(19): Show CTTTCTTTCTTTTTCTTTCTTTCTCTT	intron_variant intron_variant	MODIFIER	NA18948.hp2 NA18948.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0237 a0001c0001t0001g0237	1	318	0.0031	26	c.670 others(43): Show c.670+3780_670+3781insAAGAGAAAGAAAGAAAAAGAAAGAAA	CDH22	ENSG00000149654.11	transcript	ENST00000537909.4	protein_coding	4/11			chr20	TogoVar
CDH23_chr10_71391920_71820947	71515394	T T	TCTCTCTC others(19): Show TCTCTCTCTCTCTCTCTCTCTCACACA	intron_variant intron_variant	MODIFIER	HG01169.hp1 HG01884.hp2 HG03195.hp2 HG01169.hp1 HG01884.hp2 HG03195.hp2	a0018 a0023 a0047 a0018 a0023 a0047	a0018c0134 a0023c0008 a0047c0164 a0018c0134 a0023c0008 a0047c0164	a0018c0134t0013 a0023c0008t0003 a0047c0164t0013 a0018c0134t0013 a0023c0008t0003 a0047c0164t0013	a0018c0134t0013g0006 a0023c0008t0003g0136 a0047c0164t0013g0033 a0018c0134t0013g0006 a0023c0008t0003g0136 a0047c0164t0013g0033	3	196	0.0153	26	c.429 others(43): Show c.429+4183_429+4184insTCTCTCTCTCTCTCTCTCTCACACAC	CDH23	ENSG00000107736.22	transcript	ENST00000224721.12	protein_coding	6/69		INFO_REALIGN_3_PRIME	chr10	TogoVar
CDH23_chr10_71391920_71820947	71759846	C C	CACACACA others(19): Show CACACACATATACACACACACACACAT	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00735.hp1	a0106 a0106	a0106c0132 a0106c0132	a0106c0132t0001 a0106c0132t0001	a0106c0132t0001g0144 a0106c0132t0001g0144	1	196	0.0051	26	c.484 others(47): Show c.4846-17833_4846-17832insCACACATATACACACACACACACA TA	CDH23	ENSG00000107736.22	transcript	ENST00000224721.12	protein_coding	38/69		INFO_REALIGN_3_PRIME	chr10	TogoVar
CDH2_chr18_27945966_28182130	28166149	C C	CATATATA others(19): Show CATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18947.hp2 NA18957.hp2 NA19010.hp1 NA18947.hp2 NA18957.hp2 NA19010.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0001 a0001c0002t0002 a0002c0003t0010 a0001c0001t0001 a0001c0002t0002 a0002c0003t0010	a0001c0001t0001g0089 a0001c0002t0002g0191 a0002c0003t0010g0238 a0001c0001t0001g0089 a0001c0002t0002g0191 a0002c0003t0010g0238	3	268	0.0112	26	c.60+ others(43): Show c.60+10813_60+10814insATATATATATATATATATATATATAT	CDH2	ENSG00000170558.10	transcript	ENST00000269141.8	protein_coding	1/15			chr18	TogoVar
CDH4_chr20_61247261_61945617	61647550	T T	TCTCTCTC others(19): Show TCTCTCTCTCTCTCTCTCTCTCTCTCC	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01243.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0003 a0002c0004t0003	a0002c0004t0003g0011 a0002c0004t0003g0011	1	106	0.0094	26	c.170 others(45): Show c.170-96012_170-96011insTCTCTCTCTCTCTCTCTCTCTCTCCC	CDH4	ENSG00000179242.16	transcript	ENST00000614565.5	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
CDH6_chr5_31188686_31334146	31199480	G G	GTATATAT others(19): Show GTATATATATGTACACACATATGTGTA	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG03225.hp1 HG03486.hp1 HG02559.hp1 HG03225.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0005 a0001c0001 a0001c0003 a0001c0005	a0001c0001t0098 a0001c0003t0004 a0001c0005t0019 a0001c0001t0098 a0001c0003t0004 a0001c0005t0019	a0001c0001t0098g0220 a0001c0003t0004g0219 a0001c0005t0019g0335 a0001c0001t0098g0220 a0001c0003t0004g0219 a0001c0005t0019g0335	3	338	0.0089	26	c.-12 others(45): Show c.-129+5601_-129+5602insATGTACACACATATGTGTATATATAT	CDH6	ENSG00000113361.13	transcript	ENST00000265071.3	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr5	TogoVar
CDH7_chr18_65746012_65895337	65844174	G G	GATATATA others(19): Show GATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01433.hp2 HG02622.hp2 HG03209.hp2 HG01433.hp2 HG02622.hp2 HG03209.hp2	a0002 a0002	a0002c0002 a0002c0003 a0002c0015 a0002c0002 a0002c0003 a0002c0015	a0002c0002t0052 a0002c0003t0004 a0002c0015t0051 a0002c0002t0052 a0002c0003t0004 a0002c0015t0051	a0002c0002t0052g0083 a0002c0003t0004g0138 a0002c0015t0051g0081 a0002c0002t0052g0083 a0002c0003t0004g0138 a0002c0015t0051g0081	3	208	0.0144	26	c.123 others(43): Show c.1235+123_1235+124insATATATATATATATATATATATATAT	CDH7	ENSG00000081138.14	transcript	ENST00000397968.4	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CDH7_chr18_65746012_65895337	65844174	G G	GATTTATA others(19): Show GATTTATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03942.hp2 NA18966.hp1 HG03942.hp2 NA18966.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0010 a0002c0002t0003 a0002c0002t0010	a0002c0002t0003g0042 a0002c0002t0010g0044 a0002c0002t0003g0042 a0002c0002t0010g0044	2	208	0.0096	26	c.123 others(43): Show c.1235+111_1235+112insTTATATATATATATATATATATATAT	CDH7	ENSG00000081138.14	transcript	ENST00000397968.4	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CDH7_chr18_65746012_65895337	65892961	A A	AAAAAAGT others(19): Show AAAAAAGTAAGAAAGAAAGAAAGAAAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0026 a0002c0004t0026	a0002c0004t0026g0009 a0002c0004t0026g0009	1	208	0.0048	26	c.12 others(39): Show c.12067_*12068insAAAAAGTAAGAAAGAAAGAAAGAAAG	CDH7	ENSG00000081138.14	transcript	ENST00000397968.4	protein_coding		2625		chr18	TogoVar
CDH8_chr16_61642250_62041438	61768367	T T	TCTCTCTC others(19): Show TCTCTCTCTCTCTCTCTCTCTCTCTCC	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01261.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0059 a0001c0001t0059	a0001c0001t0059g0154 a0001c0001t0059g0154	1	168	0.0060	26	c.141 others(47): Show c.1414+20978_1414+20979insGGAGAGAGAGAGAGAGAGAGAGAG AG	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	8/11			chr16	TogoVar
CDH8_chr16_61642250_62041438	61953895	T T	TTATATAT others(19): Show TTATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG03579.hp1 HG03579.hp2 others(1): Show HG02647.hp2 HG03579.hp1 HG03579.hp2 NA18990.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0005 a0001c0001t0010 a0001c0001t0027 others(1): Show a0001c0001t0005 a0001c0001t0010 a0001c0001t0027 a0001c0002t0029	a0001c0001t0005g0054 a0001c0001t0010g0072 a0001c0001t0027g0009 others(1): Show a0001c0001t0005g0054 a0001c0001t0010g0072 a0001c0001t0027g0009 a0001c0002t0029g0005	4	168	0.0238	26	c.253 others(45): Show c.253-52448_253-52423dupTATATATATATATATATATATATATA	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	2/11			chr16	TogoVar
CDH8_chr16_61642250_62041438	61960258	T T	TACATATA others(19): Show TACATATATACGTGTGTGTGTATACAC	intron_variant intron_variant	MODIFIER	HG01109.hp2 NA18968.hp2 NA19007.hp1 HG01109.hp2 NA18968.hp2 NA19007.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0066 a0001c0002t0028 a0001c0002t0075 a0001c0001t0066 a0001c0002t0028 a0001c0002t0075	a0001c0001t0066g0165 a0001c0002t0028g0008 a0001c0002t0075g0099 a0001c0001t0066g0165 a0001c0002t0028g0008 a0001c0002t0075g0099	3	168	0.0179	26	c.253 others(45): Show c.253-58811_253-58786dupGTGTATACACACACACGTATATATGT	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	2/11			chr16	TogoVar
CDH8_chr16_61642250_62041438	61960349	G G	GTGTGTGT others(19): Show GTGTGTGTATACACATACATATATACA	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02615.hp2 HG02622.hp2 others(3): Show HG01891.hp2 HG02615.hp2 HG02622.hp2 HG02647.hp1 HG02965.hp1 HG02976.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0008 a0001c0001t0009 a0001c0001t0016 others(1): Show a0001c0001t0008 a0001c0001t0009 a0001c0001t0016 a0001c0002t0074	a0001c0001t0008g0112 a0001c0001t0008g0120 a0001c0001t0009g0041 others(3): Show a0001c0001t0008g0112 a0001c0001t0008g0120 a0001c0001t0009g0041 a0001c0001t0009g0113 a0001c0001t0016g0015 a0001c0002t0074g0068	6	168	0.0357	26	c.253 others(45): Show c.253-58877_253-58876insTGTATATATGTATGTGTATACACACA	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	2/11			chr16	TogoVar
CDH8_chr16_61642250_62041438	61960378	T T	TGTGTGTG others(19): Show TGTGTGTGTATACACATACATATATAC	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0044 a0001c0001t0044	a0001c0001t0044g0038 a0001c0001t0044g0038	1	168	0.0060	26	c.253 others(45): Show c.253-58906_253-58905insGTATATATGTATGTGTATACACACAC	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	2/11			chr16	TogoVar
CDH8_chr16_61642250_62041438	61960379	G G	GTGTGTGT others(19): Show GTGTGTGTATACACATACATATATACA	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03486.hp1 HG03098.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0030 a0001c0001t0063 a0001c0001t0030 a0001c0001t0063	a0001c0001t0030g0003 a0001c0001t0063g0047 a0001c0001t0030g0003 a0001c0001t0063g0047	2	168	0.0119	26	c.253 others(45): Show c.253-58907_253-58906insTGTATATATGTATGTGTATACACACA	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	2/11			chr16	TogoVar
CDH9_chr5_26875597_27043586	26954388	C C	CTTTTTTT others(19): Show CTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01070.hp2 NA19030.hp1 HG01070.hp2 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0024 a0001c0001t0001g0121 a0001c0001t0001g0024 a0001c0001t0001g0121	2	240	0.0083	26	c.228 others(45): Show c.228+33717_228+33718insAAAAAAAAAAAAAAAAAAAAAAAAAA	CDH9	ENSG00000113100.10	transcript	ENST00000231021.9	protein_coding	2/11			chr5	TogoVar
CDHR2_chr5_176544342_176600824	176544451	C C	CTCTCTTT others(19): Show CTCTCTTTCTCTTTCTCTCTTTCCTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18969.hp1 NA18969.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0053 a0002c0001t0001g0053	1	344	0.0029	26	c.-49 others(37): Show c.-4979_-4978insTCTCTTTCTCTTTCTCTCTTTCCTTT	CDHR2	ENSG00000074276.11	transcript	ENST00000261944.10	protein_coding		4890		chr5	TogoVar
CDHR2_chr5_176544342_176600824	176591762	G G	GTTGGTGT others(19): Show GTTGGTGTTGAGGTGATGGTGATGGTT	intron_variant intron_variant	MODIFIER	NA19067.hp1 NA19067.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0123 a0002c0001t0001g0123	1	344	0.0029	26	c.373 others(43): Show c.3734+278_3734+279insTTGGTGTTGAGGTGATGGTGATGGTT	CDHR2	ENSG00000074276.11	transcript	ENST00000261944.10	protein_coding	30/31			chr5	TogoVar
CDHR2_chr5_176544342_176600824	176591951	G G	GTTGGTGT others(19): Show GTTGGTGTTGAGGTGATGGTGATGGTT	intron_variant intron_variant	MODIFIER	NA19009.hp2 NA19009.hp2	a0002 a0002	a0002c0026 a0002c0026	a0002c0026t0001 a0002c0026t0001	a0002c0026t0001g0293 a0002c0026t0001g0293	1	344	0.0029	26	c.373 others(43): Show c.3734+467_3734+468insTTGGTGTTGAGGTGATGGTGATGGTT	CDHR2	ENSG00000074276.11	transcript	ENST00000261944.10	protein_coding	30/31			chr5	TogoVar
CDHR5_chr11_611583_629955	628896	C C	CTTTTCTT others(19): Show CTTTTCTTTCTTTCTTTCTTTCTTTCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02717.hp1 HG02895.hp1 HG02897.hp1 HG02717.hp1 HG02895.hp1 HG02897.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0002 a0002c0002t0001g0024 a0002c0002t0001g0002 a0002c0002t0001g0024	3	409	0.0073	26	c.-39 others(37): Show c.-3995_-3994insAGAAAGAAAGAAAGAAAGAAAGAAAA	CDHR5	ENSG00000099834.19	transcript	ENST00000397542.7	protein_coding		3942		chr11	TogoVar
CDIN1_chr15_36574626_36815244	36703219	A A	AATATATA others(19): Show AATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19060.hp2 NA19060.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0040 a0001c0001t0002g0040	1	238	0.0042	26	c.544 others(43): Show c.544+5843_544+5844insATATATATATATATATATATATATAT	CDIN1	ENSG00000186073.14	transcript	ENST00000566621.6	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr15	TogoVar
CDIN1_chr15_36574626_36815244	36703230	A A	ATATATAT others(19): Show ATATATATATATATATATATATATATC	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0195 a0001c0001t0010g0195	1	238	0.0042	26	c.544 others(43): Show c.544+5843_544+5844insATATATATATATATATATATATCTAT	CDIN1	ENSG00000186073.14	transcript	ENST00000566621.6	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr15	TogoVar
CDIN1_chr15_36574626_36815244	36751229	T T	TTATATAT others(19): Show TTATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG02056.hp1 HG01255.hp2 HG02056.hp1	a0001 a0002 a0001 a0002	a0001c0004 a0002c0002 a0001c0004 a0002c0002	a0001c0004t0002 a0002c0002t0002 a0001c0004t0002 a0002c0002t0002	a0001c0004t0002g0034 a0002c0002t0002g0002 a0001c0004t0002g0034 a0002c0002t0002g0002	2	238	0.0084	26	c.716 others(45): Show c.716+41274_716+41299dupATATATATATATATATATATATATAT	CDIN1	ENSG00000186073.14	transcript	ENST00000566621.6	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr15	TogoVar
CDIN1_chr15_36574626_36815244	36774163	T T	TGTGTGTG others(19): Show TGTGTGTGTGTGTGTGTGCGCGCGCGC	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0094 a0002c0002t0003g0094	1	238	0.0042	26	c.717 others(45): Show c.717-34160_717-34159insTGTGTGTGTGTGTGTGCGCGCGCGCG	CDIN1	ENSG00000186073.14	transcript	ENST00000566621.6	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr15	TogoVar
CDIN1_chr15_36574626_36815244	36774163	T T	TGTGTGTG others(19): Show TGTGTGTGTGTGTGTGTGTGTGCGCGC	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0122 a0001c0001t0006g0122	1	238	0.0042	26	c.717 others(45): Show c.717-34160_717-34159insTGTGTGTGTGTGTGTGTGTGCGCGCG	CDIN1	ENSG00000186073.14	transcript	ENST00000566621.6	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr15	TogoVar

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