Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
FAF1_chr1_50432028_50965267	50554390	T T	TATATATA others(19): Show TATATATAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0027 a0001c0001t0016g0027	1	190	0.0053	26	c.126 others(47): Show c.1268+12686_1268+12687insCTCTCTCTCTCTCTCTCTCTATAT AT	FAF1	ENSG00000185104.21	transcript	ENST00000396153.7	protein_coding	13/18			chr1	TogoVar
FAF1_chr1_50432028_50965267	50554390	T T	TATATATA others(19): Show TATATATATATAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0022 a0001c0001t0003g0022	1	190	0.0053	26	c.126 others(47): Show c.1268+12686_1268+12687insCTCTCTCTCTCTCTCTATATATAT AT	FAF1	ENSG00000185104.21	transcript	ENST00000396153.7	protein_coding	13/18			chr1	TogoVar
FAF1_chr1_50432028_50965267	50885312	T T	TCTCTCAC others(19): Show TCTCTCACACACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0022	a0001c0001t0022g0078 a0001c0001t0022g0078	1	190	0.0053	26	c.46- others(43): Show c.46-27316_46-27315insTGTGTGTGTGTGTGTGTGTGTGAGAG	FAF1	ENSG00000185104.21	transcript	ENST00000396153.7	protein_coding	1/18			chr1	TogoVar
FAM104A_chr17_73202365_73237394	73234773	C C	CTGTGTGT others(19): Show CTGTGTGTGTGTGTGTGTGTGTGTGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp2 HG01071.hp2 HG01192.hp1 others(25): Show HG00323.hp2 HG01071.hp2 HG01192.hp1 HG01255.hp2 HG02056.hp1 HG02056.hp2 HG02129.hp1 HG02735.hp2 HG02809.hp2 HG03017.hp1 HG03239.hp2 HG04115.hp1 HG04184.hp1 HG04228.hp1 NA18612.hp1 NA18747.hp2 NA18948.hp2 NA18957.hp2 NA18975.hp2 NA18979.hp2 NA18982.hp1 NA18995.hp1 NA19006.hp2 NA19011.hp2 NA19030.hp1 NA19240.hp2 NA20129.hp2 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0009 a0001c0002t0001 a0001c0001t0001 a0001c0001t0009 a0001c0002t0001	a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0009 others(22): Show a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0014 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0066 a0001c0001t0001g0068 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0075 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0081 a0001c0001t0001g0106 a0001c0001t0001g0152 a0001c0001t0001g0155 a0001c0001t0001g0164 a0001c0001t0001g0168 a0001c0001t0001g0174 a0001c0001t0001g0187 a0001c0001t0009g0018 a0001c0002t0001g0204	28	400	0.0700	26	c.-24 others(37): Show c.-2468_-2467insCACACACACACACACACACACACACA	FAM104A	ENSG00000133193.13	transcript	ENST00000405159.8	protein_coding		2380		chr17	TogoVar
FAM107B_chr10_14513557_14779897	14519971	C C	CCCCCCCC others(19): Show CCCCCCCCTTAGAATAGTAGCATGTGG	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01516.hp2 HG01516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0026 a0001c0001t0026	a0001c0001t0026g0117 a0001c0001t0026g0117	1	272	0.0037	26	c.12 others(37): Show c.1218_*1219insCCACATGCTACTATTCTAAGGGGGGG	FAM107B	ENSG00000065809.14	transcript	ENST00000181796.7	protein_coding	5/5	1218		chr10	TogoVar
FAM107B_chr10_14513557_14779897	14572736	A A	ATTTTATA others(19): Show ATTTTATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02040.hp2 NA18963.hp1 NA18982.hp1 others(1): Show HG02040.hp2 NA18963.hp1 NA18982.hp1 NA19074.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0002c0005 a0001c0001 a0002c0002 a0002c0005	a0001c0001t0001 a0002c0002t0022 a0002c0005t0027 a0001c0001t0001 a0002c0002t0022 a0002c0005t0027	a0001c0001t0001g0093 a0001c0001t0001g0128 a0002c0002t0022g0253 others(1): Show a0001c0001t0001g0093 a0001c0001t0001g0128 a0002c0002t0022g0253 a0002c0005t0027g0258	4	272	0.0147	26	c.470 others(45): Show c.470-42222_470-42221insATATATATATATATATATATATAAAA	FAM107B	ENSG00000065809.14	transcript	ENST00000181796.7	protein_coding	2/4			chr10	TogoVar
FAM107B_chr10_14513557_14779897	14572739	T T	TTATATAT others(19): Show TTATATATATATATATATATATATGTA	intron_variant intron_variant	MODIFIER	HG01256.hp1 NA18612.hp2 HG01256.hp1 NA18612.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0006 a0001c0001t0002 a0001c0001t0006	a0001c0001t0002g0139 a0001c0001t0006g0130 a0001c0001t0002g0139 a0001c0001t0006g0130	2	272	0.0074	26	c.470 others(45): Show c.470-42225_470-42224insTACATATATATATATATATATATATA	FAM107B	ENSG00000065809.14	transcript	ENST00000181796.7	protein_coding	2/4			chr10	TogoVar
FAM107B_chr10_14513557_14779897	14628112	G G	GTTTTTTT others(19): Show GTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0103 a0001c0001t0001g0103	1	272	0.0037	26	c.469 others(45): Show c.469+39521_469+39522insAAAAAAAAAAAAAAAAAAAAAAAAAA	FAM107B	ENSG00000065809.14	transcript	ENST00000181796.7	protein_coding	2/4			chr10	TogoVar
FAM107B_chr10_14513557_14779897	14737766	T T	TTCTCTCT others(19): Show TTCTCTCTCTCTCTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG02132.hp1 HG02723.hp2 others(4): Show HG01496.hp1 HG02132.hp1 HG02723.hp2 HG03927.hp2 NA18962.hp1 NA19012.hp1 NA19090.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0002 a0001c0001 a0001c0003 a0002c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(3): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0008 a0001c0003t0003 a0002c0002t0001	a0001c0001t0001g0085 a0001c0001t0001g0088 a0001c0001t0003g0175 others(4): Show a0001c0001t0001g0085 a0001c0001t0001g0088 a0001c0001t0003g0175 a0001c0001t0004g0166 a0001c0001t0008g0061 a0001c0003t0003g0228 a0002c0002t0001g0248	7	272	0.0257	26	c.411 others(45): Show c.411+36461_411+36486dupGAGAGAGAGAGAGAGAGAGAGAGAGA	FAM107B	ENSG00000065809.14	transcript	ENST00000181796.7	protein_coding	1/4			chr10	TogoVar
FAM107B_chr10_14513557_14779897	14767024	G G	GTATATAT others(19): Show GTATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02148.hp1 HG03491.hp1 HG03834.hp2 others(4): Show HG02148.hp1 HG03491.hp1 HG03834.hp2 HG04184.hp1 NA18947.hp2 NA18953.hp2 NA19074.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0001c0001t0008 a0001c0003t0002	a0001c0001t0001g0069 a0001c0001t0001g0160 a0001c0001t0002g0048 others(4): Show a0001c0001t0001g0069 a0001c0001t0001g0160 a0001c0001t0002g0048 a0001c0001t0002g0215 a0001c0001t0007g0107 a0001c0001t0008g0151 a0001c0003t0002g0118	7	272	0.0257	26	c.411 others(43): Show c.411+7203_411+7228dupTATATATATATATATATATATATATA	FAM107B	ENSG00000065809.14	transcript	ENST00000181796.7	protein_coding	1/4			chr10	TogoVar
FAM107B_chr10_14513557_14779897	14767024	G G	GTGTATAT others(19): Show GTGTATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01256.hp1 HG01256.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0139 a0001c0001t0002g0139	1	272	0.0037	26	c.411 others(43): Show c.411+7228_411+7229insTATATATATATATATATATATATACA	FAM107B	ENSG00000065809.14	transcript	ENST00000181796.7	protein_coding	1/4			chr10	TogoVar
FAM107B_chr10_14513557_14779897	14767055	T T	TATATATA others(19): Show TATATATATATATATAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG01168.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0172 a0001c0001t0001g0172	1	272	0.0037	26	c.411 others(43): Show c.411+7197_411+7198insCTCTCTCTCTCTATATATATATATAT	FAM107B	ENSG00000065809.14	transcript	ENST00000181796.7	protein_coding	1/4			chr10	TogoVar
FAM107B_chr10_14513557_14779897	14767055	T T	TATATATA others(19): Show TATATATATATATATATAGAGAGAGAG	intron_variant intron_variant	MODIFIER	NA18978.hp2 NA19085.hp2 NA18978.hp2 NA19085.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0002c0002t0004 a0001c0001t0002 a0002c0002t0004	a0001c0001t0002g0224 a0002c0002t0004g0246 a0001c0001t0002g0224 a0002c0002t0004g0246	2	272	0.0074	26	c.411 others(43): Show c.411+7197_411+7198insCTCTCTCTCTATATATATATATATAT	FAM107B	ENSG00000065809.14	transcript	ENST00000181796.7	protein_coding	1/4			chr10	TogoVar
FAM107B_chr10_14513557_14779897	14767055	T T	TATATATA others(19): Show TATATATATATATATATATAGAGAGAG	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG01433.hp1 HG00597.hp2 HG01433.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0001 a0001c0001t0006	a0001c0001t0001g0163 a0001c0001t0006g0169 a0001c0001t0001g0163 a0001c0001t0006g0169	2	272	0.0074	26	c.411 others(43): Show c.411+7197_411+7198insCTCTCTCTATATATATATATATATAT	FAM107B	ENSG00000065809.14	transcript	ENST00000181796.7	protein_coding	1/4			chr10	TogoVar
FAM107B_chr10_14513557_14779897	14767055	T T	TATATATA others(19): Show TATATATATATATATATATATAGAGAG	intron_variant intron_variant	MODIFIER	HG00280.hp1 NA18978.hp1 HG00280.hp1 NA18978.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0002 a0001c0001t0001 a0001c0003t0002	a0001c0001t0001g0194 a0001c0003t0002g0132 a0001c0001t0001g0194 a0001c0003t0002g0132	2	272	0.0074	26	c.411 others(43): Show c.411+7197_411+7198insCTCTCTATATATATATATATATATAT	FAM107B	ENSG00000065809.14	transcript	ENST00000181796.7	protein_coding	1/4			chr10	TogoVar
FAM107B_chr10_14513557_14779897	14767055	T T	TATATATA others(19): Show TATATATATATATATATATATATAGAG	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01175.hp1 HG00738.hp2 HG01175.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0003 a0001c0001t0004	a0001c0001t0003g0140 a0001c0001t0004g0125 a0001c0001t0003g0140 a0001c0001t0004g0125	2	272	0.0074	26	c.411 others(43): Show c.411+7197_411+7198insCTCTATATATATATATATATATATAT	FAM107B	ENSG00000065809.14	transcript	ENST00000181796.7	protein_coding	1/4			chr10	TogoVar
FAM110A_chr20_828715_851277	850094	T T	TACACACA others(19): Show TACACACACACACACACACACACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01934.hp1 HG01934.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0207 a0001c0001t0001g0207	1	436	0.0023	26	c.44 others(37): Show c.4402_*4403insACACACACACACACACACACACACAC	FAM110A	ENSG00000125898.13	transcript	ENST00000381941.8	protein_coding		3818		chr20	TogoVar
FAM110A_chr20_828715_851277	850134	C C	CACACACA others(19): Show CACACACACACACACACACACACACAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19064.hp2 NA19064.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0194 a0001c0001t0003g0194	1	436	0.0023	26	c.44 others(37): Show c.4442_*4443insACACACACACACACACACACACACAT	FAM110A	ENSG00000125898.13	transcript	ENST00000381941.8	protein_coding		3858		chr20	TogoVar
FAM110B_chr8_57989523_58153784	58006901	G G	GTATATAT others(19): Show GTATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02717.hp1 HG02615.hp1 HG02717.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0007 a0001c0001t0003 a0001c0001t0007	a0001c0001t0003g0151 a0001c0001t0007g0300 a0001c0001t0003g0151 a0001c0001t0007g0300	2	300	0.0067	26	c.-51 others(47): Show c.-512+12118_-512+12119insATATATATATATATATATATATAT AT	FAM110B	ENSG00000169122.12	transcript	ENST00000519262.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr8	TogoVar
FAM110B_chr8_57989523_58153784	58006923	A A	ATATATAT others(19): Show ATATATATATATATATATATATTTTTT	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0141 a0001c0001t0003g0141	1	300	0.0033	26	c.-51 others(47): Show c.-512+12118_-512+12119insATATATATATATATATATATTTTT TT	FAM110B	ENSG00000169122.12	transcript	ENST00000519262.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr8	TogoVar
FAM110B_chr8_57989523_58153784	58047591	C C	CCTCTCTC others(19): Show CCTCTCTCTCTCTCTCTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG02165.hp2 HG00642.hp2 HG02165.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0282 a0001c0001t0002g0037 a0001c0001t0001g0282 a0001c0001t0002g0037	2	300	0.0067	26	c.-41 others(47): Show c.-414+15907_-414+15932dupCTCTCTCTCTCTCTCTCTCTCTCT CT	FAM110B	ENSG00000169122.12	transcript	ENST00000519262.6	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr8	TogoVar
FAM110B_chr8_57989523_58153784	58075275	T T	TTGTGTGT others(19): Show TTGTGTGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG02922.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0167 a0001c0001t0002g0167	1	300	0.0033	26	c.-41 others(43): Show c.-413-239_-413-238insGTGTGTGTGTGTGTGTGTGTGTGTGT	FAM110B	ENSG00000169122.12	transcript	ENST00000519262.6	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr8	TogoVar
FAM117B_chr2_202629969_202774757	202731332	A A	AAAATATA others(19): Show AAAATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01099.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0042 a0001c0001t0008g0042	1	318	0.0031	26	c.960 others(43): Show c.960+4970_960+4971insAATATATATATATATATATATATATA	FAM117B	ENSG00000138439.12	transcript	ENST00000392238.3	protein_coding	4/7		INFO_REALIGN_3_PRIME	chr2	TogoVar
FAM117B_chr2_202629969_202774757	202731332	A A	AACATATA others(19): Show AACATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01361.hp2 HG01361.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0095 a0001c0001t0001g0095	1	318	0.0031	26	c.960 others(43): Show c.960+4970_960+4971insCATATATATATATATATATATATATA	FAM117B	ENSG00000138439.12	transcript	ENST00000392238.3	protein_coding	4/7		INFO_REALIGN_3_PRIME	chr2	TogoVar
FAM117B_chr2_202629969_202774757	202731362	T T	TATATATA others(19): Show TATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02293.hp1 HG02293.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0069 a0001c0001t0069	a0001c0001t0069g0089 a0001c0001t0069g0089	1	318	0.0031	26	c.960 others(43): Show c.960+5005_960+5006insATATATATATATATATATACATATAT	FAM117B	ENSG00000138439.12	transcript	ENST00000392238.3	protein_coding	4/7		INFO_REALIGN_3_PRIME	chr2	TogoVar
FAM118B_chr11_126206782_126267968	126210520	T T	TACATACA others(19): Show TACATACATACACACACACACACACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03834.hp2 HG03834.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0252 a0001c0001t0001g0252	1	346	0.0029	26	c.-13 others(37): Show c.-1387_-1386insACATACATACACACACACACACACAC	FAM118B	ENSG00000197798.9	transcript	ENST00000533050.6	protein_coding		1261		chr11	TogoVar
FAM120A_chr9_93446685_93571112	93545780	C C	CTTTTTTT others(19): Show CTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02970.hp1 NA18941.hp1 HG02970.hp1 NA18941.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0003 a0001c0001t0004	a0001c0001t0003g0061 a0001c0001t0004g0074 a0001c0001t0003g0061 a0001c0001t0004g0074	2	318	0.0063	26	c.215 others(45): Show c.2159+2310_2159+2335dupTTTTTTTTTTTTTTTTTTTTTTTTTT	FAM120A	ENSG00000048828.18	transcript	ENST00000277165.11	protein_coding	11/17		INFO_REALIGN_3_PRIME	chr9	TogoVar
FAM120A_chr9_93446685_93571112	93554120	T T	TACACACA others(19): Show TACACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG02896.hp1 HG02897.hp2 others(2): Show HG00438.hp2 HG02896.hp1 HG02897.hp2 NA18944.hp1 NA18995.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0003 a0001c0002t0001 a0001c0004t0005 a0001c0001t0003 a0001c0002t0001 a0001c0004t0005	a0001c0001t0003g0066 a0001c0002t0001g0197 a0001c0002t0001g0202 others(2): Show a0001c0001t0003g0066 a0001c0002t0001g0197 a0001c0002t0001g0202 a0001c0002t0001g0224 a0001c0004t0005g0295	5	318	0.0157	26	c.227 others(45): Show c.2275-2227_2275-2202dupACACACACACACACACACACACACAC	FAM120A	ENSG00000048828.18	transcript	ENST00000277165.11	protein_coding	12/17		INFO_REALIGN_3_PRIME	chr9	TogoVar
FAM120B_chr6_170301758_170412067	170361193	T T	TATATATA others(19): Show TATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	NA18969.hp1 NA18969.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0003 a0003c0004t0003	a0003c0004t0003g0162 a0003c0004t0003g0162	1	289	0.0035	26	c.228 others(45): Show c.2283+2876_2283+2877insTATATATATATATATATATATATACA	FAM120B	ENSG00000112584.14	transcript	ENST00000476287.4	protein_coding	6/10		INFO_REALIGN_3_PRIME	chr6	TogoVar
FAM135A_chr6_70408508_70566174	70411363	C C	CTATATAT others(19): Show CTATATATATATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0001 a0001c0009t0001	a0001c0009t0001g0212 a0001c0009t0001g0212	1	268	0.0037	26	c.-25 others(37): Show c.-2559_-2558insTATATATATATATATATATATATATA	FAM135A	ENSG00000082269.17	transcript	ENST00000418814.7	protein_coding		2144		chr6	TogoVar
FAM135A_chr6_70408508_70566174	70542276	A A	ACACACAC others(19): Show ACACACACACACACACACACACACACC	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0003 a0001c0004t0003	a0001c0004t0003g0010 a0001c0004t0003g0010	1	268	0.0037	26	c.422 others(45): Show c.4228+3876_4228+3877insACACACACACACACACACACACACCC	FAM135A	ENSG00000082269.17	transcript	ENST00000418814.7	protein_coding	20/21		INFO_REALIGN_3_PRIME	chr6	TogoVar
FAM135B_chr8_138125023_138502261	138226184	T T	TGTGTGTG others(19): Show TGTGTGTGTGTGTGTGCGCGCGCGCGC	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG01975.hp2 HG01106.hp2 HG01975.hp2	a0001 a0006 a0001 a0006	a0001c0013 a0006c0012 a0001c0013 a0006c0012	a0001c0013t0002 a0006c0012t0002 a0001c0013t0002 a0006c0012t0002	a0001c0013t0002g0137 a0006c0012t0002g0170 a0001c0013t0002g0137 a0006c0012t0002g0170	2	212	0.0094	26	c.669 others(45): Show c.669+16757_669+16758insGCGCGCGCGCGCACACACACACACAC	FAM135B	ENSG00000147724.12	transcript	ENST00000395297.6	protein_coding	7/19			chr8	TogoVar
FAM135B_chr8_138125023_138502261	138226184	T T	TGTGTGTG others(19): Show TGTGTGTGTGTGTGTGTGTGCGCGCGC	intron_variant intron_variant	MODIFIER	NA18971.hp1 NA18972.hp1 NA18972.hp2 others(1): Show NA18971.hp1 NA18972.hp1 NA18972.hp2 NA19065.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0003 a0002c0008 a0003c0001 others(1): Show a0001c0003 a0002c0008 a0003c0001 a0003c0020	a0001c0003t0018 a0002c0008t0001 a0003c0001t0013 others(1): Show a0001c0003t0018 a0002c0008t0001 a0003c0001t0013 a0003c0020t0004	a0001c0003t0018g0178 a0002c0008t0001g0107 a0003c0001t0013g0199 others(1): Show a0001c0003t0018g0178 a0002c0008t0001g0107 a0003c0001t0013g0199 a0003c0020t0004g0076	4	212	0.0189	26	c.669 others(45): Show c.669+16757_669+16758insGCGCGCGCACACACACACACACACAC	FAM135B	ENSG00000147724.12	transcript	ENST00000395297.6	protein_coding	7/19			chr8	TogoVar
FAM135B_chr8_138125023_138502261	138414119	C C	CATATATA others(19): Show CATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02280.hp2 HG02723.hp2 HG02257.hp2 HG02280.hp2 HG02723.hp2	a0001 a0003 a0008 a0001 a0003 a0008	a0001c0004 a0003c0001 a0008c0016 a0001c0004 a0003c0001 a0008c0016	a0001c0004t0008 a0003c0001t0004 a0008c0016t0008 a0001c0004t0008 a0003c0001t0004 a0008c0016t0008	a0001c0004t0008g0128 a0003c0001t0004g0020 a0008c0016t0008g0127 a0001c0004t0008g0128 a0003c0001t0004g0020 a0008c0016t0008g0127	3	212	0.0142	26	c.-19 others(45): Show c.-19-46118_-19-46117insATATATATATATATATATATATATAT	FAM135B	ENSG00000147724.12	transcript	ENST00000395297.6	protein_coding	1/19			chr8	TogoVar
FAM135B_chr8_138125023_138502261	138426010	T T	TATATATA others(19): Show TATATATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	NA20905.hp1 NA20905.hp1	a0003 a0003	a0003c0001 a0003c0001	a0003c0001t0001 a0003c0001t0001	a0003c0001t0001g0059 a0003c0001t0001g0059	1	212	0.0047	26	c.-19 others(45): Show c.-19-58009_-19-58008insGTGTATATATATATATATATATATAT	FAM135B	ENSG00000147724.12	transcript	ENST00000395297.6	protein_coding	1/19			chr8	TogoVar
FAM13A_chr4_88720960_89062185	88945990	G G	GTATGTAT others(19): Show GTATGTATGTATGTGTGTATATATATA	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01192.hp2 HG01167.hp1 HG01192.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0005 a0001c0001t0001g0006	2	208	0.0096	26	c.606 others(43): Show c.606-7750_606-7749insTATATATATACACACATACATACATA	FAM13A	ENSG00000138640.15	transcript	ENST00000264344.10	protein_coding	4/23			chr4	TogoVar
FAM13A_chr4_88720960_89062185	88945990	G G	GTGTGTGT others(19): Show GTGTGTGTGTGTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0182 a0001c0001t0005g0182	1	208	0.0048	26	c.606 others(43): Show c.606-7750_606-7749insTATATATATATATATACACACACACA	FAM13A	ENSG00000138640.15	transcript	ENST00000264344.10	protein_coding	4/23			chr4	TogoVar
FAM13A_chr4_88720960_89062185	88945990	G G	GTGTGTGT others(19): Show GTGTGTGTGTGTATGTATATATATATA	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0138 a0001c0001t0001g0138	1	208	0.0048	26	c.606 others(43): Show c.606-7750_606-7749insTATATATATATACATACACACACACA	FAM13A	ENSG00000138640.15	transcript	ENST00000264344.10	protein_coding	4/23			chr4	TogoVar
FAM13A_chr4_88720960_89062185	88945990	G G	GTGTGTGT others(19): Show GTGTGTGTGTGTGTGTATATATATATA	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00642.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0181 a0001c0001t0005g0181	1	208	0.0048	26	c.606 others(43): Show c.606-7750_606-7749insTATATATATATACACACACACACACA	FAM13A	ENSG00000138640.15	transcript	ENST00000264344.10	protein_coding	4/23			chr4	TogoVar
FAM13A_chr4_88720960_89062185	89061609	T T	TTTTTTTT others(19): Show TTTTTTTTTTTTTTTTTTTTTTTTTTG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18612.hp2 NA18612.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0165 a0001c0001t0015g0165	1	208	0.0048	26	c.-46 others(37): Show c.-4646_-4645insCAAAAAAAAAAAAAAAAAAAAAAAAA	FAM13A	ENSG00000138640.15	transcript	ENST00000264344.10	protein_coding		4425		chr4	TogoVar
FAM13B_chr5_137932960_138038079	137966482	T T	TAGAGAGA others(19): Show TAGAGAGAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	NA18612.hp2 NA18612.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0156 a0001c0001t0001g0156	1	322	0.0031	26	c.118 others(45): Show c.1180-4014_1180-4013insCTCTCTCTCTCTCTCTCTCTCTCTCT	FAM13B	ENSG00000031003.11	transcript	ENST00000689681.1	protein_coding	10/23			chr5	TogoVar
FAM13B_chr5_137932960_138038079	137966488	T T	TATATATA others(19): Show TATATATATATAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG03017.hp2 HG03017.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0006 a0002c0003t0002g0006	1	322	0.0031	26	c.118 others(45): Show c.1180-4020_1180-4019insCTCTCTCTCTCTCTCTATATATATAT	FAM13B	ENSG00000031003.11	transcript	ENST00000689681.1	protein_coding	10/23			chr5	TogoVar
FAM13B_chr5_137932960_138038079	137966488	T T	TATATATA others(19): Show TATATATATATATATATAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0007 a0002c0003t0002g0007	1	322	0.0031	26	c.118 others(45): Show c.1180-4020_1180-4019insCTCTCTCTCTATATATATATATATAT	FAM13B	ENSG00000031003.11	transcript	ENST00000689681.1	protein_coding	10/23			chr5	TogoVar
FAM13B_chr5_137932960_138038079	137983213	A A	AAAAAAAA others(19): Show AAAAAAAAAAAAAAAAAAAAAAAAAAC	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0036 a0001c0001t0002g0036	1	322	0.0031	26	c.117 others(45): Show c.1179+2043_1179+2044insGTTTTTTTTTTTTTTTTTTTTTTTTT	FAM13B	ENSG00000031003.11	transcript	ENST00000689681.1	protein_coding	10/23			chr5	TogoVar
FAM149A_chr4_186099704_186180337	186130293	C C	CTCTCTAT others(19): Show CTCTCTATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0234 a0001c0001t0001g0234	1	390	0.0026	26	c.567 others(45): Show c.567-18879_567-18878insCTCTATATATATATATATATATATAT	FAM149A	ENSG00000109794.14	transcript	ENST00000706927.1	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr4	TogoVar
FAM149A_chr4_186099704_186180337	186130293	C C	CTCTCTCT others(19): Show CTCTCTCTCTATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG02886.hp1 HG00408.hp1 HG02886.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0002 a0001c0001 a0003c0002	a0001c0001t0006 a0003c0002t0079 a0001c0001t0006 a0003c0002t0079	a0001c0001t0006g0380 a0003c0002t0079g0075 a0001c0001t0006g0380 a0003c0002t0079g0075	2	390	0.0051	26	c.567 others(45): Show c.567-18879_567-18878insCTCTCTCTATATATATATATATATAT	FAM149A	ENSG00000109794.14	transcript	ENST00000706927.1	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr4	TogoVar
FAM149A_chr4_186099704_186180337	186130293	C C	CTCTCTCT others(19): Show CTCTCTCTCTCTATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01981.hp1 HG02027.hp1 HG01884.hp1 HG01981.hp1 HG02027.hp1	a0012 a0025 a0033 a0012 a0025 a0033	a0012c0057 a0025c0036 a0033c0044 a0012c0057 a0025c0036 a0033c0044	a0012c0057t0009 a0025c0036t0076 a0033c0044t0002 a0012c0057t0009 a0025c0036t0076 a0033c0044t0002	a0012c0057t0009g0286 a0025c0036t0076g0058 a0033c0044t0002g0098 a0012c0057t0009g0286 a0025c0036t0076g0058 a0033c0044t0002g0098	3	390	0.0077	26	c.567 others(45): Show c.567-18879_567-18878insCTCTCTCTCTATATATATATATATAT	FAM149A	ENSG00000109794.14	transcript	ENST00000706927.1	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr4	TogoVar
FAM149A_chr4_186099704_186180337	186130293	C C	CTCTCTCT others(19): Show CTCTCTCTCTCTCTATATATATATATA	intron_variant intron_variant	MODIFIER	HG02056.hp1 HG02976.hp1 NA18952.hp1 HG02056.hp1 HG02976.hp1 NA18952.hp1	a0001 a0010 a0001 a0010	a0001c0001 a0001c0005 a0010c0019 a0001c0001 a0001c0005 a0010c0019	a0001c0001t0018 a0001c0005t0004 a0010c0019t0009 a0001c0001t0018 a0001c0005t0004 a0010c0019t0009	a0001c0001t0018g0070 a0001c0005t0004g0317 a0010c0019t0009g0287 a0001c0001t0018g0070 a0001c0005t0004g0317 a0010c0019t0009g0287	3	390	0.0077	26	c.567 others(45): Show c.567-18879_567-18878insCTCTCTCTCTCTATATATATATATAT	FAM149A	ENSG00000109794.14	transcript	ENST00000706927.1	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr4	TogoVar
FAM149A_chr4_186099704_186180337	186130293	C C	CTCTCTCT others(19): Show CTCTCTCTCTCTCTCTATATATATATA	intron_variant intron_variant	MODIFIER	NA18956.hp1 NA18956.hp1	a0003 a0003	a0003c0002 a0003c0002	a0003c0002t0002 a0003c0002t0002	a0003c0002t0002g0080 a0003c0002t0002g0080	1	390	0.0026	26	c.567 others(45): Show c.567-18879_567-18878insCTCTCTCTCTCTCTATATATATATAT	FAM149A	ENSG00000109794.14	transcript	ENST00000706927.1	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr4	TogoVar
FAM149A_chr4_186099704_186180337	186130293	C C	CTCTCTCT others(19): Show CTCTCTCTCTCTCTCTCTATATATATA	intron_variant intron_variant	MODIFIER	HG01361.hp2 HG02165.hp1 NA18969.hp1 HG01361.hp2 HG02165.hp1 NA18969.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0040 a0001c0001t0001g0057 a0001c0001t0002g0123 a0001c0001t0001g0040 a0001c0001t0001g0057 a0001c0001t0002g0123	3	390	0.0077	26	c.567 others(45): Show c.567-18879_567-18878insCTCTCTCTCTCTCTCTATATATATAT	FAM149A	ENSG00000109794.14	transcript	ENST00000706927.1	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr4	TogoVar

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