Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
THEG_chr19_356747_381026	377443	T T	TCTGTGCC others(20): Show TCTGTGCCCCCACCCAGCCTCTCCCCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18965.hp2 NA18965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0169 a0001c0001t0001g0169	1	370	0.0027	27	c.-14 others(38): Show c.-1474_-1473insGGGGGGAGAGGCTGGGTGGGGGCACAG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1418		chr19	TogoVar
THEG_chr19_356747_381026	377469	T T	TCCGTGCC others(20): Show TCCGTGCCCCACCCAGCCTCTCCCCCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0109 a0001c0001t0011g0109	1	370	0.0027	27	c.-15 others(38): Show c.-1500_-1499insGGGGGGGAGAGGCTGGGTGGGGCACGG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1444		chr19	TogoVar
THEG_chr19_356747_381026	377496	T T	TCTGTGCC others(20): Show TCTGTGCCCCACCCAGCCTCTCCCCCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02080.hp1 HG02083.hp2 NA19010.hp2 HG02080.hp1 HG02083.hp2 NA19010.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0003 a0002c0002t0001 a0002c0002t0003	a0002c0002t0001g0322 a0002c0002t0001g0332 a0002c0002t0003g0317 a0002c0002t0001g0322 a0002c0002t0001g0332 a0002c0002t0003g0317	3	370	0.0081	27	c.-15 others(38): Show c.-1527_-1526insGGGGGGGAGAGGCTGGGTGGGGCACAG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1471		chr19	TogoVar
THEG_chr19_356747_381026	377528	G G	GCCCCACC others(20): Show GCCCCACCCAGCCTCTCCCCCTCTGTGC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01192.hp1 HG01243.hp2 NA18967.hp1 others(8): Show HG01192.hp1 HG01243.hp2 NA18967.hp1 NA18980.hp1 NA18983.hp2 NA18992.hp2 NA18995.hp2 NA19002.hp1 NA19030.hp2 NA19063.hp2 NA20129.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0011	a0001c0001 a0002c0002 a0003c0004 others(1): Show a0001c0001 a0002c0002 a0003c0004 a0011c0018	a0001c0001t0001 a0001c0001t0003 a0001c0001t0022 others(3): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0022 a0002c0002t0001 a0003c0004t0004 a0011c0018t0003	a0001c0001t0001g0181 a0001c0001t0003g0173 a0001c0001t0022g0008 others(7): Show a0001c0001t0001g0181 a0001c0001t0003g0173 a0001c0001t0022g0008 a0002c0002t0001g0202 a0002c0002t0001g0246 a0002c0002t0001g0279 a0002c0002t0001g0280 a0002c0002t0001g0282 a0003c0004t0004g0292 a0011c0018t0003g0355	11	370	0.0297	27	c.-15 others(38): Show c.-1559_-1558insGCACAGAGGGGGAGAGGCTGGGTGGGG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1503		chr19	TogoVar
THEG_chr19_356747_381026	377606	G G	GCCCCACC others(20): Show GCCCCACCCAGCCTCTCCCCCTCTGTGC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0099 a0001c0001t0014g0099	1	370	0.0027	27	c.-16 others(38): Show c.-1637_-1636insGCACAGAGGGGGAGAGGCTGGGTGGGG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1581		chr19	TogoVar
THEM4_chr1_151865866_151914511	151867582	C C	CTCCTCTT others(20): Show CTCCTCTTCTTCTTCTTCTTCTTCTTCT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18943.hp2 NA18948.hp1 NA18953.hp1 others(8): Show NA18943.hp2 NA18948.hp1 NA18953.hp1 NA18972.hp2 NA18979.hp2 NA18988.hp2 NA18997.hp1 NA19005.hp2 NA19066.hp2 NA19082.hp1 NA19087.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0026 a0001c0001t0052 a0001c0001t0001 a0001c0001t0026 a0001c0001t0052	a0001c0001t0001g0001 a0001c0001t0001g0011 a0001c0001t0001g0019 others(6): Show a0001c0001t0001g0001 a0001c0001t0001g0011 a0001c0001t0001g0019 a0001c0001t0001g0051 a0001c0001t0001g0055 a0001c0001t0001g0077 a0001c0001t0001g0082 a0001c0001t0026g0059 a0001c0001t0052g0058	11	374	0.0294	27	c.73 others(38): Show c.7305_*7306insAGAAGAAGAAGAAGAAGAAGAAGAGGA	THEM4	ENSG00000159445.13	transcript	ENST00000368814.8	protein_coding		3283		chr1	TogoVar
THEM4_chr1_151865866_151914511	151867588	C C	CTCCTCTT others(20): Show CTCCTCTTCTTCTTCTTCTTCTTCTTCT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00733.hp1 HG01346.hp2 HG01993.hp2 others(16): Show HG00733.hp1 HG01346.hp2 HG01993.hp2 HG02004.hp2 HG02056.hp2 HG02145.hp2 HG02258.hp2 HG02280.hp2 HG02976.hp1 HG03041.hp2 HG03471.hp2 HG03579.hp2 HG03831.hp2 HG06807.hp2 NA19009.hp2 NA19030.hp1 NA19043.hp2 NA20300.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0009 a0001c0001t0012 others(3): Show a0001c0001t0001 a0001c0001t0009 a0001c0001t0012 a0001c0001t0026 a0001c0001t0040 a0001c0001t0044	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0012 others(14): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0012 a0001c0001t0001g0023 a0001c0001t0001g0068 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0009g0024 a0001c0001t0009g0025 a0001c0001t0009g0090 a0001c0001t0009g0091 a0001c0001t0012g0197 a0001c0001t0026g0049 a0001c0001t0040g0093 a0001c0001t0044g0092	19	374	0.0508	27	c.72 others(38): Show c.7299_*7300insAGAAGAAGAAGAAGAAGAAGAAGAGGA	THEM4	ENSG00000159445.13	transcript	ENST00000368814.8	protein_coding		3277		chr1	TogoVar
THEMIS_chr6_127703200_127906058	127731864	A A	ATTTTTTT others(20): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00558.hp1 HG01081.hp1 others(20): Show HG00438.hp2 HG00558.hp1 HG01081.hp1 HG01109.hp1 HG01169.hp2 HG01261.hp2 HG02109.hp1 HG02293.hp1 HG02622.hp2 HG02647.hp1 HG02647.hp2 HG02723.hp2 HG02735.hp1 HG03195.hp2 HG03492.hp2 NA18951.hp1 NA18960.hp2 NA18993.hp1 NA19011.hp2 NA19079.hp2 NA19083.hp1 NA19084.hp2 NA20129.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0001c0003 a0002c0001 a0001c0002 a0001c0003 a0002c0001	a0001c0002t0001 a0001c0003t0003 a0002c0001t0001 a0001c0002t0001 a0001c0003t0003 a0002c0001t0001	a0001c0002t0001g0010 a0001c0002t0001g0047 a0001c0003t0003g0007 others(20): Show a0001c0002t0001g0010 a0001c0002t0001g0047 a0001c0003t0003g0007 a0002c0001t0001g0035 a0002c0001t0001g0036 a0002c0001t0001g0040 a0002c0001t0001g0045 a0002c0001t0001g0046 a0002c0001t0001g0056 a0002c0001t0001g0070 a0002c0001t0001g0078 a0002c0001t0001g0091 a0002c0001t0001g0102 a0002c0001t0001g0112 a0002c0001t0001g0116 a0002c0001t0001g0118 a0002c0001t0001g0124 a0002c0001t0001g0191 a0002c0001t0001g0192 a0002c0001t0001g0194 a0002c0001t0001g0196 a0002c0001t0001g0200 a0002c0001t0001g0203	23	223	0.1031	27	c.175 others(48): Show c.1759-12042_1759-12041insAAAAAAAAAAAAAAAAAAAAAAAA AAA	THEMIS	ENSG00000172673.12	transcript	ENST00000368248.5	protein_coding	4/5			chr6	TogoVar
THEMIS_chr6_127703200_127906058	127746921	A A	ATTATTAT others(20): Show ATTATTATATAATTATATTATATATAAT	intron_variant intron_variant	MODIFIER	HG02083.hp2 HG03540.hp2 NA19076.hp1 HG02083.hp2 HG03540.hp2 NA19076.hp1	a0002 a0002	a0002c0001 a0002c0009 a0002c0001 a0002c0009	a0002c0001t0001 a0002c0009t0001 a0002c0001t0001 a0002c0009t0001	a0002c0001t0001g0089 a0002c0001t0001g0122 a0002c0009t0001g0214 a0002c0001t0001g0089 a0002c0001t0001g0122 a0002c0009t0001g0214	3	223	0.0135	27	c.175 others(48): Show c.1759-27099_1759-27098insATTATATATAATATAATTATATAA TAA	THEMIS	ENSG00000172673.12	transcript	ENST00000368248.5	protein_coding	4/5			chr6	TogoVar
THOC1_chr18_209520_273047	215966	A A	ATTTTTTT others(20): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19002.hp1 NA19002.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0073 a0001c0001t0001g0073	1	376	0.0027	27	c.160 others(44): Show c.1603-463_1603-462insAAAAAAAAAAAAAAAAAAAAAAAAAAA	THOC1	ENSG00000079134.13	transcript	ENST00000261600.11	protein_coding	19/20			chr18	TogoVar
THRAP3_chr1_36219443_36310357	36253760	A A	ATTTTTTT others(20): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18747.hp2 NA18747.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0001 a0001c0006t0001	a0001c0006t0001g0199 a0001c0006t0001g0199	1	252	0.0040	27	c.-13 others(46): Show c.-134-5603_-134-5602insTTTTTTTTTTTTTTTTTTTTTTTTTT T	THRAP3	ENSG00000054118.15	transcript	ENST00000354618.10	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
THRB_chr3_24112153_24499850	24188858	A A	ATATATAT others(20): Show ATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0014 a0001c0001t0004g0014	1	178	0.0056	27	c.283 others(44): Show c.283+1215_283+1216insATATATATATATATATATATATATATA	THRB	ENSG00000151090.20	transcript	ENST00000646209.2	protein_coding	5/10			chr3	TogoVar
THRB_chr3_24112153_24499850	24477007	A A	ATTTTTTT others(20): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02622.hp2 HG02257.hp2 HG02622.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0037 a0001c0001t0004 a0001c0001t0037	a0001c0001t0004g0087 a0001c0001t0037g0089 a0001c0001t0004g0087 a0001c0001t0037g0089	2	178	0.0112	27	c.-26 others(48): Show c.-261+17644_-261+17645insAAAAAAAAAAAAAAAAAAAAAAAA AAA	THRB	ENSG00000151090.20	transcript	ENST00000646209.2	protein_coding	1/10			chr3	TogoVar
THSD4_chr15_71110471_71788383	71326700	A A	AAATATAT others(20): Show AAATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02004.hp2 HG02004.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0026 a0001c0004t0026	a0001c0004t0026g0061 a0001c0004t0026g0061	1	116	0.0086	27	c.101 others(48): Show c.1015+69986_1015+69987insATATATATATATATATATATATAT ATA	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	6/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71326700	A A	ATATATAT others(20): Show ATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG00621.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0014 a0001c0002t0014	a0001c0002t0014g0007 a0001c0002t0014g0007	1	116	0.0086	27	c.101 others(48): Show c.1015+69985_1015+69986insTATATATATATATATATATATATA TAT	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	6/17			chr15	TogoVar
THSD4_chr15_71110471_71788383	71724287	A A	ATATATAT others(20): Show ATATATATATATATATATATATATATTT	intron_variant intron_variant	MODIFIER	HG02300.hp1 HG02300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0067 a0001c0001t0001g0067	1	116	0.0086	27	c.135 others(46): Show c.1358-4261_1358-4260insATATATATATATATATATATATATTT T	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	8/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71724287	A A	ATATATAT others(20): Show ATATATATATATATATATATATATTTTT	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG00621.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0014 a0001c0002t0014	a0001c0002t0014g0007 a0001c0002t0014g0007	1	116	0.0086	27	c.135 others(46): Show c.1358-4261_1358-4260insATATATATATATATATATATATTTTT T	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	8/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD4_chr15_71110471_71788383	71769251	C C	CCGGCCGC others(20): Show CCGGCCGCCCCTACTGGGAAGTGAGGAG	intron_variant intron_variant	MODIFIER	HG03654.hp2 HG03654.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0042 a0001c0001t0001g0042	1	116	0.0086	27	c.277 others(46): Show c.2770-1812_2770-1811insGGCCGCCCCTACTGGGAAGTGAGGAG C	THSD4	ENSG00000187720.15	transcript	ENST00000261862.8	protein_coding	16/17		INFO_REALIGN_3_PRIME	chr15	TogoVar
THSD7A_chr7_11365365_11837198	11509821	C C	CAAAAAAA others(20): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00642.hp2 HG01069.hp2 others(2): Show HG00544.hp2 HG00642.hp2 HG01069.hp2 HG01952.hp1 HG02027.hp1	a0001 a0004 a0009 a0001 a0004 a0009	a0001c0003 a0001c0006 a0004c0052 others(1): Show a0001c0003 a0001c0006 a0004c0052 a0009c0067	a0001c0003t0062 a0001c0006t0001 a0004c0052t0001 others(1): Show a0001c0003t0062 a0001c0006t0001 a0004c0052t0001 a0009c0067t0008	a0001c0003t0062g0167 a0001c0006t0001g0038 a0001c0006t0001g0118 others(2): Show a0001c0003t0062g0167 a0001c0006t0001g0038 a0001c0006t0001g0118 a0004c0052t0001g0029 a0009c0067t0008g0178	5	180	0.0278	27	c.182 others(48): Show c.1823-27840_1823-27839insTTTTTTTTTTTTTTTTTTTTTTTT TTT	THSD7A	ENSG00000005108.17	transcript	ENST00000423059.9	protein_coding	6/27			chr7	TogoVar
THSD7A_chr7_11365365_11837198	11566965	T T	TAGCGGGA others(20): Show TAGCGGGAGGGGGGGGGGGGGGGGCGGG	intron_variant intron_variant	MODIFIER	HG01169.hp1 HG01169.hp1	a0001 a0001	a0001c0011 a0001c0011	a0001c0011t0002 a0001c0011t0002	a0001c0011t0002g0153 a0001c0011t0002g0153	1	180	0.0056	27	c.145 others(48): Show c.1453+23494_1453+23495insCCCGCCCCCCCCCCCCCCCCTCCC GCT	THSD7A	ENSG00000005108.17	transcript	ENST00000423059.9	protein_coding	4/27			chr7	TogoVar
THSD7A_chr7_11365365_11837198	11769153	A A	ATATATAT others(20): Show ATATATATATATATTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02647.hp1 NA18946.hp1 HG02647.hp1 NA18946.hp1	a0008 a0010 a0008 a0010	a0008c0018 a0010c0026 a0008c0018 a0010c0026	a0008c0018t0013 a0010c0026t0020 a0008c0018t0013 a0010c0026t0020	a0008c0018t0013g0131 a0010c0026t0020g0010 a0008c0018t0013g0131 a0010c0026t0020g0010	2	180	0.0111	27	c.190 others(46): Show c.190+62603_190+62604insAAAAAAAAAAAAAAATATATATATAT A	THSD7A	ENSG00000005108.17	transcript	ENST00000423059.9	protein_coding	1/27			chr7	TogoVar
THSD7A_chr7_11365365_11837198	11769153	A A	ATATATAT others(20): Show ATATATATATATTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01952.hp2 NA19058.hp1 HG00735.hp1 HG01952.hp2 NA19058.hp1	a0001 a0023 a0001 a0023	a0001c0002 a0001c0006 a0023c0066 a0001c0002 a0001c0006 a0023c0066	a0001c0002t0017 a0001c0006t0005 a0023c0066t0064 a0001c0002t0017 a0001c0006t0005 a0023c0066t0064	a0001c0002t0017g0110 a0001c0006t0005g0122 a0023c0066t0064g0180 a0001c0002t0017g0110 a0001c0006t0005g0122 a0023c0066t0064g0180	3	180	0.0167	27	c.190 others(46): Show c.190+62603_190+62604insAAAAAAAAAAAAAAAAATATATATAT A	THSD7A	ENSG00000005108.17	transcript	ENST00000423059.9	protein_coding	1/27			chr7	TogoVar
THSD7B_chr2_136760545_137682718	136954714	C C	CAAAAAAA others(20): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01358.hp2 HG02258.hp1 others(1): Show HG00735.hp2 HG01358.hp2 HG02258.hp1 HG03453.hp1	a0001 a0002 a0020 others(1): Show a0001 a0002 a0020 a0021	a0001c0001 a0002c0030 a0020c0038 others(1): Show a0001c0001 a0002c0030 a0020c0038 a0021c0039	a0001c0001t0002 a0002c0030t0004 a0020c0038t0007 others(1): Show a0001c0001t0002 a0002c0030t0004 a0020c0038t0007 a0021c0039t0002	a0001c0001t0002g0034 a0002c0030t0004g0050 a0020c0038t0007g0010 others(1): Show a0001c0001t0002g0034 a0002c0030t0004g0050 a0020c0038t0007g0010 a0021c0039t0002g0004	4	98	0.0408	27	c.139 others(46): Show c.139+72417_139+72418insAAAAAAAAAAAAAAAAAAAAAAAAAA A	THSD7B	ENSG00000144229.13	transcript	ENST00000409968.6	protein_coding	2/27		INFO_REALIGN_3_PRIME	chr2	TogoVar
THSD7B_chr2_136760545_137682718	137294583	C C	CAAAAAAA others(20): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG03471.hp2 HG03540.hp2 others(1): Show HG02630.hp2 HG03471.hp2 HG03540.hp2 NA18906.hp2	a0001 a0002 a0013 a0001 a0002 a0013	a0001c0010 a0002c0006 a0013c0022 a0001c0010 a0002c0006 a0013c0022	a0001c0010t0002 a0002c0006t0002 a0013c0022t0003 a0001c0010t0002 a0002c0006t0002 a0013c0022t0003	a0001c0010t0002g0020 a0001c0010t0002g0053 a0002c0006t0002g0035 others(1): Show a0001c0010t0002g0020 a0001c0010t0002g0053 a0002c0006t0002g0035 a0013c0022t0003g0097	4	98	0.0408	27	c.250 others(48): Show c.2500+18578_2500+18579insAAAAAAAAAAAAAAAAAAAAAAAA AAA	THSD7B	ENSG00000144229.13	transcript	ENST00000409968.6	protein_coding	12/27		INFO_REALIGN_3_PRIME	chr2	TogoVar
TH_chr11_2158929_2176815	2161846	A A	ACACCCCT others(20): Show ACACCCCTGTCCCCACACCCCTGTCCCC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01993.hp1 HG01993.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0098 a0002c0001t0001g0098	1	388	0.0026	27	c.23 others(38): Show c.2386_*2387insGGGGACAGGGGTGTGGGGACAGGGGTG	TH	ENSG00000180176.15	transcript	ENST00000352909.8	protein_coding		2082		chr11	TogoVar
TIAM1_chr21_31113418_31349261	31222707	A A	ATATATAT others(20): Show ATATATATATATTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18978.hp2 NA18978.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0001 a0002c0004t0001	a0002c0004t0001g0198 a0002c0004t0001g0198	1	212	0.0047	27	c.199 others(44): Show c.1995+698_1995+699insAAAAAAAAAAAAAAAAATATATATATA	TIAM1	ENSG00000156299.15	transcript	ENST00000541036.6	protein_coding	8/27			chr21	TogoVar
TIAM2_chr6_154990315_155262723	155027336	T T	TAATATAT others(20): Show TAATATATATACTGTGTTACATATATAC	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG03209.hp1 HG04115.hp2 HG02895.hp2 HG03209.hp1 HG04115.hp2	a0001 a0021 a0001 a0021	a0001c0002 a0021c0046 a0001c0002 a0021c0046	a0001c0002t0005 a0001c0002t0022 a0021c0046t0001 a0001c0002t0005 a0001c0002t0022 a0021c0046t0001	a0001c0002t0005g0223 a0001c0002t0022g0181 a0021c0046t0001g0084 a0001c0002t0005g0223 a0001c0002t0022g0181 a0021c0046t0001g0084	3	230	0.0130	27	c.-20 others(48): Show c.-209+31845_-209+31871dupAATATATATACTGTGTTACATATA TAC	TIAM2	ENSG00000146426.19	transcript	ENST00000682666.1	protein_coding	1/26		INFO_REALIGN_3_PRIME	chr6	TogoVar
TIAM2_chr6_154990315_155262723	155114036	A A	ATATATTT others(20): Show ATATATTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19081.hp1 NA19081.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0143 a0001c0001t0001g0143	1	230	0.0044	27	c.-11 others(48): Show c.-117-13453_-117-13452insATATTTTTTTTTTTTTTTTTTTTT TTT	TIAM2	ENSG00000146426.19	transcript	ENST00000682666.1	protein_coding	2/26		INFO_REALIGN_3_PRIME	chr6	TogoVar
TICRR_chr15_89570469_89633023	89609100	C C	CTTTTTTT others(20): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02717.hp2 HG02622.hp2 HG02717.hp2	a0003 a0003	a0003c0006 a0003c0006	a0003c0006t0001 a0003c0006t0001	a0003c0006t0001g0236 a0003c0006t0001g0285 a0003c0006t0001g0236 a0003c0006t0001g0285	2	344	0.0058	27	c.286 others(44): Show c.2869+153_2869+179dupTTTTTTTTTTTTTTTTTTTTTTTTTTT	TICRR	ENSG00000140534.14	transcript	ENST00000268138.12	protein_coding	15/21		INFO_REALIGN_3_PRIME	chr15	TogoVar
TIGD4_chr4_152764354_152784730	152766132	G G	GGAGGGGG others(20): Show GGAGGGGGGAGGGGGAGAGGGAGAGGGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01175.hp2 HG01934.hp1 HG02055.hp2 others(6): Show HG01175.hp2 HG01934.hp1 HG02055.hp2 HG02083.hp2 HG02602.hp1 HG03688.hp2 HG03927.hp1 NA19002.hp1 NA19006.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0019 others(4): Show a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0019 a0001c0001t0001g0072 a0001c0001t0002g0003 a0001c0001t0002g0016 a0001c0001t0002g0021	9	424	0.0212	27	c.33 others(38): Show c.3333_*3334insTCCCTCTCCCTCTCCCCCTCCCCCCTC	TIGD4	ENSG00000169989.3	transcript	ENST00000304337.3	protein_coding		3221		chr4	TogoVar
TIGD4_chr4_152764354_152784730	152766132	G G	GGGAGGGG others(20): Show GGGAGGGGGAGGGGGAGAGGGAGAGGGA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18949.hp2 NA18949.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	424	0.0024	27	c.33 others(38): Show c.3333_*3334insTCCCTCTCCCTCTCCCCCTCCCCCTCC	TIGD4	ENSG00000169989.3	transcript	ENST00000304337.3	protein_coding		3221		chr4	TogoVar
TIMM23_chr10_45967489_46008742	45993244	C C	CTTTTTTT others(20): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01192.hp2 HG01891.hp2 others(1): Show HG01167.hp2 HG01192.hp2 HG01891.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0060 a0001c0001t0001g0065 a0001c0001t0001g0070 others(1): Show a0001c0001t0001g0060 a0001c0001t0001g0065 a0001c0001t0001g0070 a0001c0001t0001g0072	4	400	0.0100	27	c.514 others(44): Show c.514+4414_514+4415insTTTTTTTTTTTTTTTTTTTTTTTTTTT	TIMM23	ENSG00000265354.4	transcript	ENST00000580018.4	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
TIMM9_chr14_58403495_58432531	58404119	A A	ATATATAT others(20): Show ATATATATATATATATATATATATTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01106.hp2 HG01257.hp1 HG01257.hp2 others(1): Show HG01106.hp2 HG01257.hp1 HG01257.hp2 HG03654.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0009 a0001c0001t0001g0033 a0001c0001t0001g0146 others(1): Show a0001c0001t0001g0009 a0001c0001t0001g0033 a0001c0001t0001g0146 a0001c0001t0001g0206	4	378	0.0106	27	c.49 others(38): Show c.4914_*4915insAAAAATATATATATATATATATATATA	TIMM9	ENSG00000100575.14	transcript	ENST00000395159.7	protein_coding		4375		chr14	TogoVar
TIMM9_chr14_58403495_58432531	58404119	A A	ATATATAT others(20): Show ATATATATATATATATATATATTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01261.hp2 HG01361.hp2 HG02615.hp2 others(2): Show HG01261.hp2 HG01361.hp2 HG02615.hp2 NA18522.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0001 a0001c0001t0001g0034 a0001c0001t0001g0117 others(2): Show a0001c0001t0001g0001 a0001c0001t0001g0034 a0001c0001t0001g0117 a0001c0001t0001g0144 a0001c0001t0002g0055	5	378	0.0132	27	c.49 others(38): Show c.4914_*4915insAAAAAAATATATATATATATATATATA	TIMM9	ENSG00000100575.14	transcript	ENST00000395159.7	protein_coding		4375		chr14	TogoVar
TIMM9_chr14_58403495_58432531	58404119	A A	ATATATAT others(20): Show ATATATATATATATATATATTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02015.hp2 NA18988.hp1 HG02015.hp2 NA18988.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0010 a0001c0001t0001g0044 a0001c0001t0001g0010 a0001c0001t0001g0044	2	378	0.0053	27	c.49 others(38): Show c.4914_*4915insAAAAAAAAATATATATATATATATATA	TIMM9	ENSG00000100575.14	transcript	ENST00000395159.7	protein_coding		4375		chr14	TogoVar
TIMM9_chr14_58403495_58432531	58404119	A A	ATATATAT others(20): Show ATATATATATATATATATTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01256.hp1 HG01515.hp1 HG03098.hp1 others(2): Show HG01256.hp1 HG01515.hp1 HG03098.hp1 NA19059.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0045 a0001c0001t0001g0107 a0001c0001t0001g0140 others(2): Show a0001c0001t0001g0045 a0001c0001t0001g0107 a0001c0001t0001g0140 a0001c0001t0001g0142 a0001c0001t0001g0153	5	378	0.0132	27	c.49 others(38): Show c.4914_*4915insAAAAAAAAAAATATATATATATATATA	TIMM9	ENSG00000100575.14	transcript	ENST00000395159.7	protein_coding		4375		chr14	TogoVar
TIMM9_chr14_58403495_58432531	58404119	A A	ATATATAT others(20): Show ATATATATATATATATTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18992.hp1 NA19059.hp1 NA18992.hp1 NA19059.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0051 a0001c0001t0001g0002 a0001c0001t0001g0051	2	378	0.0053	27	c.49 others(38): Show c.4914_*4915insAAAAAAAAAAAAATATATATATATATA	TIMM9	ENSG00000100575.14	transcript	ENST00000395159.7	protein_coding		4375		chr14	TogoVar
TIMMDC1_chr3_119493547_119530090	119495225	C C	CAAAAAAA others(20): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0025 a0001c0002t0001g0025	1	428	0.0023	27	c.-35 others(38): Show c.-3509_-3508insAAAAAAAAAAAAAAAAAAAAAAAAAAA	TIMMDC1	ENSG00000113845.10	transcript	ENST00000494664.6	protein_coding		3321		chr3	TogoVar
TINAG_chr6_54303441_54395142	54360841	G G	GTTTTTTT others(20): Show GTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0001 a0006c0007t0001	a0006c0007t0001g0226 a0006c0007t0001g0226	1	374	0.0027	27	c.125 others(46): Show c.1250+6210_1250+6236dupTTTTTTTTTTTTTTTTTTTTTTTTTT T	TINAG	ENSG00000137251.16	transcript	ENST00000259782.9	protein_coding	9/10		INFO_REALIGN_3_PRIME	chr6	TogoVar
TLDC2_chr20_36871138_36899235	36890419	T T	TTTCTTTC others(20): Show TTTCTTTCTTTCTTTCTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00735.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0253 a0001c0002t0001g0253	1	384	0.0026	27	c.17 others(44): Show c.17+1018_*17+1019insCTTTCTTTCTTTCTTTCTTTCTTTCTT	TLDC2	ENSG00000101342.10	transcript	ENST00000217320.8	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr20	TogoVar
TLE7_chr16_71424980_71447054	71437443	G G	GAAGAAAG others(20): Show GAAGAAAGGAAAGAGAAGGGAGAAGAGA	intron_variant intron_variant	MODIFIER	NA19072.hp1 NA19072.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0061 a0001c0002t0001g0061	1	412	0.0024	27	c.-96 others(44): Show c.-96-4050_-96-4024dupTCTCTTCTCCCTTCTCTTTCCTTTCTT	TLE7	ENSG00000260734.6	transcript	ENST00000561754.4	protein_coding	1/9			chr16	TogoVar
TLK1_chr2_170985823_171165893	170986503	A A	ATATATAT others(20): Show ATATATATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03942.hp2 HG03942.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0110 a0001c0001t0001g0110	1	266	0.0038	27	c.72 others(38): Show c.7276_*7277insATATATATATATATATATATATATATA	TLK1	ENSG00000198586.14	transcript	ENST00000431350.7	protein_coding		4319		chr2	TogoVar
TLK1_chr2_170985823_171165893	170986507	A A	ATATATAT others(20): Show ATATATATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18942.hp1 NA18942.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0176 a0001c0001t0007g0176	1	266	0.0038	27	c.72 others(38): Show c.7272_*7273insATATATATATATATATATATATATATA	TLK1	ENSG00000198586.14	transcript	ENST00000431350.7	protein_coding		4315		chr2	TogoVar
TLK2_chr17_62473825_62620481	62540400	A A	ATTTTTTT others(20): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18940.hp1 NA18954.hp1 NA18940.hp1 NA18954.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0011 a0001c0002t0011	a0001c0002t0011g0117 a0001c0002t0011g0143 a0001c0002t0011g0117 a0001c0002t0011g0143	2	292	0.0069	27	c.531 others(44): Show c.531+4086_531+4087insTTTTTTTTTTTTTTTTTTTTTTTTTTT	TLK2	ENSG00000146872.19	transcript	ENST00000346027.10	protein_coding	7/21		INFO_REALIGN_3_PRIME	chr17	TogoVar
TLL2_chr10_96359608_96518926	96476240	A A	ATATATAT others(20): Show ATATATATATATATATATATATATTTTT	intron_variant intron_variant	MODIFIER	HG01952.hp2 HG01952.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0014 a0001c0001t0001g0014	1	256	0.0039	27	c.286 others(44): Show c.286+4108_286+4109insAAAAATATATATATATATATATATATA	TLL2	ENSG00000095587.9	transcript	ENST00000357947.4	protein_coding	2/20			chr10	TogoVar
TLL2_chr10_96359608_96518926	96476240	A A	ATATATAT others(20): Show ATATATATATATATATATTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03942.hp2 HG03942.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0166 a0001c0002t0004g0166	1	256	0.0039	27	c.286 others(44): Show c.286+4108_286+4109insAAAAAAAAAAATATATATATATATATA	TLL2	ENSG00000095587.9	transcript	ENST00000357947.4	protein_coding	2/20			chr10	TogoVar
TLL2_chr10_96359608_96518926	96476240	A A	ATATATAT others(20): Show ATATATATATATATATTCTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01358.hp1 HG01361.hp1 NA18962.hp1 HG01358.hp1 HG01361.hp1 NA18962.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0001 a0001c0001t0002 a0001c0001t0005	a0001c0001t0001g0216 a0001c0001t0002g0120 a0001c0001t0005g0138 a0001c0001t0001g0216 a0001c0001t0002g0120 a0001c0001t0005g0138	3	256	0.0117	27	c.286 others(44): Show c.286+4108_286+4109insAAAAAAAAAAGAATATATATATATATA	TLL2	ENSG00000095587.9	transcript	ENST00000357947.4	protein_coding	2/20			chr10	TogoVar
TLL2_chr10_96359608_96518926	96476240	A A	ATATATAT others(20): Show ATATATATATATATATTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18995.hp2 NA19091.hp2 NA18995.hp2 NA19091.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0004 a0001c0001t0001 a0001c0002t0004	a0001c0001t0001g0157 a0001c0002t0004g0187 a0001c0001t0001g0157 a0001c0002t0004g0187	2	256	0.0078	27	c.286 others(44): Show c.286+4108_286+4109insAAAAAAAAAAAAATATATATATATATA	TLL2	ENSG00000095587.9	transcript	ENST00000357947.4	protein_coding	2/20			chr10	TogoVar
TLL2_chr10_96359608_96518926	96476240	A A	ATATATAT others(20): Show ATATATATATATATTCTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG03130.hp2 HG02647.hp2 HG03130.hp2	a0001 a0002 a0001 a0002	a0001c0003 a0002c0004 a0001c0003 a0002c0004	a0001c0003t0001 a0002c0004t0003 a0001c0003t0001 a0002c0004t0003	a0001c0003t0001g0238 a0002c0004t0003g0234 a0001c0003t0001g0238 a0002c0004t0003g0234	2	256	0.0078	27	c.286 others(44): Show c.286+4108_286+4109insAAAAAAAAAAAAGAATATATATATATA	TLL2	ENSG00000095587.9	transcript	ENST00000357947.4	protein_coding	2/20			chr10	TogoVar
TLL2_chr10_96359608_96518926	96476240	A A	ATATATAT others(20): Show ATATATATATATATTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01109.hp2 HG01099.hp1 HG01109.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0007 a0001c0001t0001 a0001c0002t0007	a0001c0001t0001g0105 a0001c0002t0007g0107 a0001c0001t0001g0105 a0001c0002t0007g0107	2	256	0.0078	27	c.286 others(44): Show c.286+4108_286+4109insAAAAAAAAAAAAAAATATATATATATA	TLL2	ENSG00000095587.9	transcript	ENST00000357947.4	protein_coding	2/20			chr10	TogoVar

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