Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CDC20B_chr5_55107971_55178177	55126466	C C	CAAAAAAA others(20): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02155.hp2 HG02155.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0193 a0002c0002t0002g0193	1	330	0.0030	27	c.989 others(42): Show c.989+790_989+791insTTTTTTTTTTTTTTTTTTTTTTTTTTT	CDC20B	ENSG00000164287.13	transcript	ENST00000381375.7	protein_coding	8/11			chr5	TogoVar
CDC25A_chr3_48152146_48193417	48191669	G G	GTGTGTAT others(20): Show GTGTGTATATATACATAATATACATACA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0156 a0001c0001t0001g0156	1	340	0.0029	27	c.-37 others(38): Show c.-3723_-3722insTGTATGTATATTATGTATATATACACA	CDC25A	ENSG00000164045.12	transcript	ENST00000302506.8	protein_coding		3253		chr3	TogoVar
CDC25C_chr5_138280269_138336804	138319836	C C	CTTTATAC others(20): Show CTTTATACCCATTAGGATAGCCATTATA	intron_variant intron_variant	MODIFIER	NA19075.hp2 NA19075.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0193 a0001c0001t0001g0193	1	362	0.0028	27	c.460 others(42): Show c.460-489_460-463dupTATAATGGCTATCCTAATGGGTATAAA	CDC25C	ENSG00000158402.21	transcript	ENST00000323760.11	protein_coding	6/13			chr5	TogoVar
CDC37L1_chr9_4674569_4713399	4682329	A A	ATTTTTTT others(20): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0141 a0001c0001t0007g0141	1	420	0.0024	27	c.132 others(44): Show c.132+2445_132+2446insTTTTTTTTTTTTTTTTTTTTTTTTTTT	CDC37L1	ENSG00000106993.12	transcript	ENST00000381854.4	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr9	TogoVar
CDC42BPA_chr1_226984865_227323492	227129666	C C	CAAAAAAA others(20): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02135.hp2 NA18954.hp1 HG02135.hp2 NA18954.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0290 a0002c0002t0001g0295 a0002c0002t0001g0290 a0002c0002t0001g0295	2	352	0.0057	27	c.139 others(44): Show c.1391-462_1391-436dupTTTTTTTTTTTTTTTTTTTTTTTTTTT	CDC42BPA	ENSG00000143776.20	transcript	ENST00000366766.8	protein_coding	10/36			chr1	TogoVar
CDC42BPA_chr1_226984865_227323492	227179635	C C	CAAAAAAA others(20): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA19076.hp2 NA19076.hp2	a0015 a0015	a0015c0031 a0015c0031	a0015c0031t0004 a0015c0031t0004	a0015c0031t0004g0282 a0015c0031t0004g0282	1	352	0.0028	27	c.599 others(46): Show c.599+14150_599+14151insTTTTTTTTTTTTTTTTTTTTTTTTTT T	CDC42BPA	ENSG00000143776.20	transcript	ENST00000366766.8	protein_coding	5/36			chr1	TogoVar
CDC42BPA_chr1_226984865_227323492	227196338	C C	CTTTTTTT others(20): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0065 a0001c0008t0065	a0001c0008t0065g0350 a0001c0008t0065g0350	1	352	0.0028	27	c.451 others(44): Show c.451-2405_451-2404insAAAAAAAAAAAAAAAAAAAAAAAAAAA	CDC42BPA	ENSG00000143776.20	transcript	ENST00000366766.8	protein_coding	4/36			chr1	TogoVar
CDC42BPB_chr14_102927380_103062549	103051149	T T	TGGGGCGG others(20): Show TGGGGCGGGGGGGGGGGGGGGGGGGGGG	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0044 a0001c0002t0044	a0001c0002t0044g0317 a0001c0002t0044g0317	1	320	0.0031	27	c.175 others(44): Show c.175+5849_175+5850insCCCCCCCCCCCCCCCCCCCCCCGCCCC	CDC42BPB	ENSG00000198752.11	transcript	ENST00000361246.7	protein_coding	1/36			chr14	TogoVar
CDC42BPB_chr14_102927380_103062549	103057649	G G	GCGCTGAC others(20): Show GCGCTGACCTCAGCGCGCCGCCCCGCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18950.hp1 NA18950.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0269 a0001c0002t0002g0269	1	320	0.0031	27	c.-47 others(36): Show c.-477_-476insGGGCGGGGCGGCGCGCTGAGGTCAGCG	CDC42BPB	ENSG00000198752.11	transcript	ENST00000361246.7	protein_coding		101		chr14	TogoVar
CDC42EP5_chr19_54460026_54478296	54474368	T T	TATATATA others(20): Show TATATATATATATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02818.hp1 HG02818.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0063 a0001c0001t0001g0063	1	421	0.0024	27	c.-14 others(38): Show c.-1447_-1446insTATATATATATATATATATATATATAT	CDC42EP5	ENSG00000167617.3	transcript	ENST00000301200.3	protein_coding		1073		chr19	TogoVar
CDC42_chr1_22047709_22106360	22061720	T T	TTTTAGTG others(20): Show TTTTAGTGGAGATGTTGGCCATCTCCAC	intron_variant intron_variant	MODIFIER	HG02056.hp2 HG02056.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0028 a0001c0001t0028	a0001c0001t0028g0067 a0001c0001t0028g0067	1	352	0.0028	27	c.-51 others(44): Show c.-51+8990_-51+9016dupTGTTGGCCATCTCCACTTTAGTGGAGA	CDC42	ENSG00000070831.18	transcript	ENST00000656825.1	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr1	TogoVar
CDH12_chr5_21745673_22858344	21920667	T T	TATAATAA others(20): Show TATAATAATAATAATAATAATAATAATA	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0026 a0002c0003t0001g0026	1	60	0.0167	27	c.526 others(46): Show c.526+54423_526+54424insTATTATTATTATTATTATTATTATTA T	CDH12	ENSG00000154162.15	transcript	ENST00000382254.6	protein_coding	6/14			chr5	TogoVar
CDH12_chr5_21745673_22858344	22107480	G G	GTATGTAT others(20): Show GTATGTATATATACACATATAATTATTA	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01070.hp2 HG01358.hp1 others(25): Show HG00639.hp1 HG01070.hp2 HG01358.hp1 HG01361.hp2 HG02258.hp1 HG02280.hp2 HG02559.hp1 HG02572.hp2 HG02647.hp1 HG02723.hp1 HG02809.hp1 HG02886.hp2 HG02896.hp1 HG02896.hp2 HG03130.hp1 HG03130.hp2 HG03209.hp1 HG03225.hp1 HG03471.hp1 HG03471.hp2 HG03579.hp1 HG03834.hp1 NA18906.hp1 NA18906.hp2 NA19002.hp2 NA20129.hp1 NA20300.hp1 NA21309.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0006 a0007 a0008	a0001c0001 a0001c0002 a0002c0003 others(7): Show a0001c0001 a0001c0002 a0002c0003 a0002c0004 a0002c0006 a0002c0013 a0003c0005 a0006c0009 a0007c0012 a0008c0014	a0001c0001t0002 a0001c0001t0009 a0001c0001t0016 others(18): Show a0001c0001t0002 a0001c0001t0009 a0001c0001t0016 a0001c0001t0017 a0001c0002t0004 a0001c0002t0020 a0001c0002t0023 a0001c0002t0024 a0001c0002t0025 a0002c0003t0001 a0002c0003t0002 a0002c0003t0005 a0002c0004t0003 a0002c0004t0012 a0002c0004t0021 a0002c0006t0004 a0002c0013t0002 a0003c0005t0001 a0006c0009t0001 a0007c0012t0002 a0008c0014t0026	a0001c0001t0002g0021 a0001c0001t0002g0051 a0001c0001t0009g0024 others(25): Show a0001c0001t0002g0021 a0001c0001t0002g0051 a0001c0001t0009g0024 a0001c0001t0016g0045 a0001c0001t0017g0025 a0001c0002t0004g0002 a0001c0002t0004g0008 a0001c0002t0004g0040 a0001c0002t0020g0057 a0001c0002t0023g0046 a0001c0002t0024g0007 a0001c0002t0025g0019 a0002c0003t0001g0053 a0002c0003t0001g0058 a0002c0003t0002g0015 a0002c0003t0005g0017 a0002c0003t0005g0060 a0002c0004t0003g0016 a0002c0004t0003g0041 a0002c0004t0012g0020 a0002c0004t0021g0013 a0002c0006t0004g0018 a0002c0013t0002g0034 a0003c0005t0001g0054 a0003c0005t0001g0056 a0006c0009t0001g0006 a0007c0012t0002g0048 a0008c0014t0026g0031	28	60	0.4667	27	c.-18 others(48): Show c.-186-28619_-186-28618insTAATAATTATATGTGTATATATAC ATA	CDH12	ENSG00000154162.15	transcript	ENST00000382254.6	protein_coding	4/14			chr5	TogoVar
CDH12_chr5_21745673_22858344	22489056	C C	CTTTTTTT others(20): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02647.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0028 a0001c0001t0002g0028	1	60	0.0167	27	c.-42 others(48): Show c.-428+16213_-428+16214insAAAAAAAAAAAAAAAAAAAAAAAA AAA	CDH12	ENSG00000154162.15	transcript	ENST00000382254.6	protein_coding	2/14			chr5	TogoVar
CDH13_chr16_82621969_83805640	82896276	A A	ATTTTTTT others(20): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03942.hp2 HG03942.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0059 a0001c0002t0001g0059	1	110	0.0091	27	c.157 others(46): Show c.157+37810_157+37836dupTTTTTTTTTTTTTTTTTTTTTTTTTT T	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	2/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	83179481	T T	TAAAAAAA others(20): Show TAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA20129.hp2 NA20129.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0004	a0001c0003t0004g0003 a0001c0003t0004g0003	1	110	0.0091	27	c.484 others(46): Show c.484-37843_484-37842insAAAAAAAAAAAAAAAAAAAAAAAAAA A	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	4/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH13_chr16_82621969_83805640	83301024	G G	GTTTTTTT others(20): Show GTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00639.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0004	a0001c0003t0004g0057 a0001c0003t0004g0057	1	110	0.0091	27	c.637 others(46): Show c.637-43838_637-43837insTTTTTTTTTTTTTTTTTTTTTTTTTT T	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	5/13			chr16	TogoVar
CDH13_chr16_82621969_83805640	83500332	C C	CTTCTTCT others(20): Show CTTCTTCTTTTCTTCTTCTTCTTCTTTT	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0041 a0001c0002t0041	a0001c0002t0041g0079 a0001c0002t0041g0079	1	110	0.0091	27	c.960 others(46): Show c.960+13677_960+13678insTTCTTCTTTTCTTCTTCTTCTTCTTT T	CDH13	ENSG00000140945.17	transcript	ENST00000567109.6	protein_coding	7/13			chr16	TogoVar
CDH18_chr5_19466296_19993200	19593707	C C	CCTCCTCC others(20): Show CCTCCTCCTCCTCCTCCTTCTTCTTCTT	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0045 a0001c0001t0003g0045	1	138	0.0073	27	c.812 others(44): Show c.812-2464_812-2463insAAGAAGAAGAAGGAGGAGGAGGAGGAG	CDH18	ENSG00000145526.12	transcript	ENST00000382275.6	protein_coding	6/12			chr5	TogoVar
CDH18_chr5_19466296_19993200	19593707	C C	CCTCCTTC others(20): Show CCTCCTTCTTCTTCTTCTTCTTCTTCTT	intron_variant intron_variant	MODIFIER	HG01978.hp1 HG01978.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0001 a0001c0003t0001g0001	1	138	0.0073	27	c.812 others(44): Show c.812-2464_812-2463insAAGAAGAAGAAGAAGAAGAAGAAGGAG	CDH18	ENSG00000145526.12	transcript	ENST00000382275.6	protein_coding	6/12			chr5	TogoVar
CDH18_chr5_19466296_19993200	19748112	C C	CAAAAAAA others(20): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG02922.hp2 HG00639.hp2 HG02922.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0026 a0001c0001t0001g0056 a0001c0001t0001g0026 a0001c0001t0001g0056	2	138	0.0145	27	c.229 others(42): Show c.229-877_229-876insTTTTTTTTTTTTTTTTTTTTTTTTTTT	CDH18	ENSG00000145526.12	transcript	ENST00000382275.6	protein_coding	3/12			chr5	TogoVar
CDH18_chr5_19466296_19993200	19902556	G G	GCTAAACC others(20): Show GCTAAACCTCTAGATAAGGACAAGCAAC	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02486.hp1 HG02572.hp1 others(2): Show HG02109.hp1 HG02486.hp1 HG02572.hp1 HG03453.hp2 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0006 a0001c0001t0016 a0001c0001t0019 others(2): Show a0001c0001t0006 a0001c0001t0016 a0001c0001t0019 a0001c0001t0020 a0001c0004t0012	a0001c0001t0006g0040 a0001c0001t0016g0018 a0001c0001t0019g0039 others(2): Show a0001c0001t0006g0040 a0001c0001t0016g0018 a0001c0001t0019g0039 a0001c0001t0020g0041 a0001c0004t0012g0062	5	138	0.0362	27	c.-25 others(48): Show c.-256-63341_-256-63315dupGTTGCTTGTCCTTATCTAGAGGTT TAG	CDH18	ENSG00000145526.12	transcript	ENST00000382275.6	protein_coding	2/12			chr5	TogoVar
CDH20_chr18_61328430_61560779	61527366	A A	AATAGATA others(20): Show AATAGATAGATAGATAGATAGATAGATG	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00609.hp1 HG00738.hp1 others(48): Show HG00099.hp2 HG00609.hp1 HG00738.hp1 HG01993.hp1 HG02015.hp2 HG02071.hp1 HG02135.hp1 HG02135.hp2 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02300.hp1 HG02451.hp1 HG02486.hp2 HG02615.hp1 HG02698.hp2 HG02723.hp1 HG02809.hp1 HG02818.hp1 HG02886.hp2 HG02896.hp2 HG02970.hp1 HG03710.hp1 HG04199.hp2 HG04228.hp1 NA18522.hp1 NA18747.hp1 NA18747.hp2 NA18943.hp2 NA18945.hp1 NA18950.hp1 NA18950.hp2 NA18954.hp1 NA18961.hp1 NA18963.hp2 NA18981.hp2 NA18986.hp1 NA18988.hp2 NA18991.hp1 NA19000.hp2 NA19010.hp1 NA19010.hp2 NA19030.hp1 NA19043.hp1 NA19056.hp1 NA19064.hp1 NA19070.hp2 NA19074.hp1 NA19079.hp2 NA19085.hp1 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 others(7): Show a0001c0001 a0001c0002 a0001c0004 a0001c0005 a0001c0006 a0001c0007 a0001c0011 a0001c0018 a0001c0019 a0001c0023	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(22): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0001c0001t0007 a0001c0001t0010 a0001c0001t0020 a0001c0001t0024 a0001c0001t0028 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 a0001c0002t0005 a0001c0002t0006 a0001c0002t0010 a0001c0004t0008 a0001c0004t0009 a0001c0005t0008 a0001c0006t0001 a0001c0007t0008 a0001c0011t0002 a0001c0018t0007 a0001c0019t0004 a0001c0023t0004	a0001c0001t0001g0059 a0001c0001t0001g0067 a0001c0001t0001g0097 others(48): Show a0001c0001t0001g0059 a0001c0001t0001g0067 a0001c0001t0001g0097 a0001c0001t0001g0118 a0001c0001t0001g0125 a0001c0001t0002g0217 a0001c0001t0004g0071 a0001c0001t0004g0086 a0001c0001t0004g0088 a0001c0001t0004g0093 a0001c0001t0004g0101 a0001c0001t0004g0110 a0001c0001t0004g0171 a0001c0001t0006g0257 a0001c0001t0006g0259 a0001c0001t0006g0263 a0001c0001t0007g0160 a0001c0001t0010g0133 a0001c0001t0020g0164 a0001c0001t0024g0117 a0001c0001t0028g0262 a0001c0002t0001g0080 a0001c0002t0001g0178 a0001c0002t0001g0248 a0001c0002t0002g0268 a0001c0002t0002g0277 a0001c0002t0003g0132 a0001c0002t0003g0141 a0001c0002t0003g0150 a0001c0002t0004g0090 a0001c0002t0004g0091 a0001c0002t0004g0112 a0001c0002t0004g0119 a0001c0002t0004g0124 a0001c0002t0004g0139 a0001c0002t0004g0175 a0001c0002t0005g0151 a0001c0002t0006g0218 a0001c0002t0006g0267 a0001c0002t0010g0154 a0001c0004t0008g0042 a0001c0004t0009g0232 a0001c0005t0008g0249 a0001c0006t0001g0082 a0001c0006t0001g0105 a0001c0007t0008g0222 a0001c0007t0008g0224 a0001c0011t0002g0236 a0001c0018t0007g0074 a0001c0019t0004g0162 a0001c0023t0004g0204	51	280	0.1821	27	c.101 others(44): Show c.1018-575_1018-574insGATAGATAGATAGATAGATAGATAGAT	CDH20	ENSG00000101542.10	transcript	ENST00000262717.9	protein_coding	6/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CDH20_chr18_61328430_61560779	61527369	A A	AGATAGAT others(20): Show AGATAGATAGATAGATAGATAGATAGAT	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03486.hp1 HG03209.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0002 a0001c0004t0008 a0001c0001t0002 a0001c0004t0008	a0001c0001t0002g0235 a0001c0004t0008g0278 a0001c0001t0002g0235 a0001c0004t0008g0278	2	280	0.0071	27	c.101 others(44): Show c.1018-597_1018-571dupGATAGATAGATAGATAGATAGATAGAT	CDH20	ENSG00000101542.10	transcript	ENST00000262717.9	protein_coding	6/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CDH22_chr20_46168739_46313498	46181752	C C	CTTCCTTC others(20): Show CTTCCTTCCTTCTTCTTTCTTTCTTTCT	intron_variant intron_variant	MODIFIER	HG03492.hp2 HG03492.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0298 a0001c0001t0001g0298	1	318	0.0031	27	c.166 others(46): Show c.1664-3556_1664-3555insAGAAAGAAAGAAAGAAGAAGGAAGGA A	CDH22	ENSG00000149654.11	transcript	ENST00000537909.4	protein_coding	10/11			chr20	TogoVar
CDH22_chr20_46168739_46313498	46236566	T T	TATATATT others(20): Show TATATATTATATATAAATATAATATATA	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG00741.hp1 HG02280.hp1 others(1): Show HG00597.hp2 HG00741.hp1 HG02280.hp1 HG02717.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0014 a0002c0003 a0001c0001 a0001c0014 a0002c0003	a0001c0001t0001 a0001c0001t0006 a0001c0014t0001 others(1): Show a0001c0001t0001 a0001c0001t0006 a0001c0014t0001 a0002c0003t0006	a0001c0001t0001g0197 a0001c0001t0006g0101 a0001c0014t0001g0105 others(1): Show a0001c0001t0001g0197 a0001c0001t0006g0101 a0001c0014t0001g0105 a0002c0003t0006g0033	4	318	0.0126	27	c.550 others(44): Show c.550+4370_550+4396dupTATATATTATATTTATATATAATATAT	CDH22	ENSG00000149654.11	transcript	ENST00000537909.4	protein_coding	3/11			chr20	TogoVar
CDH3_chr16_68640310_68705292	68654380	A A	ATTTTTTT others(20): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02717.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0006 a0001c0004t0006	a0001c0004t0006g0168 a0001c0004t0006g0168	1	338	0.0030	27	c.160 others(44): Show c.160+8642_160+8668dupTTTTTTTTTTTTTTTTTTTTTTTTTTT	CDH3	ENSG00000062038.15	transcript	ENST00000264012.9	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH4_chr20_61247261_61945617	61383114	A A	AGAATATA others(20): Show AGAATATATATGAATATATTATATATAT	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02647.hp2 HG03130.hp1 others(1): Show HG02622.hp1 HG02647.hp2 HG03130.hp1 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0020 a0001c0001 a0001c0020	a0001c0001t0001 a0001c0001t0009 a0001c0001t0038 others(1): Show a0001c0001t0001 a0001c0001t0009 a0001c0001t0038 a0001c0020t0006	a0001c0001t0001g0030 a0001c0001t0009g0013 a0001c0001t0038g0092 others(1): Show a0001c0001t0001g0030 a0001c0001t0009g0013 a0001c0001t0038g0092 a0001c0020t0006g0094	4	106	0.0377	27	c.169 others(48): Show c.169+128213_169+128239dupATGAATATATTATATATATGAATA TAT	CDH4	ENSG00000179242.16	transcript	ENST00000614565.5	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
CDH4_chr20_61247261_61945617	61383199	T T	TTATATAT others(20): Show TTATATATGAATATATATGAATATATTA	intron_variant intron_variant	MODIFIER	HG01123.hp2 HG01496.hp2 HG01123.hp2 HG01496.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0005 a0001c0001 a0002c0005	a0001c0001t0002 a0002c0005t0007 a0001c0001t0002 a0002c0005t0007	a0001c0001t0002g0078 a0002c0005t0007g0100 a0001c0001t0002g0078 a0002c0005t0007g0100	2	106	0.0189	27	c.169 others(48): Show c.169+128282_169+128308dupATATATTATATATATGAATATATA TGA	CDH4	ENSG00000179242.16	transcript	ENST00000614565.5	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
CDH4_chr20_61247261_61945617	61383555	G G	GATATATG others(20): Show GATATATGATATATATGAATATATATGA	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02809.hp1 HG02809.hp2 others(3): Show HG02630.hp1 HG02809.hp1 HG02809.hp2 HG03195.hp1 HG03209.hp2 HG03516.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0003 a0001c0006 others(2): Show a0001c0001 a0001c0003 a0001c0006 a0003c0017 a0003c0018	a0001c0001t0009 a0001c0001t0051 a0001c0003t0053 others(3): Show a0001c0001t0009 a0001c0001t0051 a0001c0003t0053 a0001c0006t0049 a0003c0017t0002 a0003c0018t0045	a0001c0001t0009g0019 a0001c0001t0051g0083 a0001c0003t0053g0074 others(3): Show a0001c0001t0009g0019 a0001c0001t0051g0083 a0001c0003t0053g0074 a0001c0006t0049g0071 a0003c0017t0002g0053 a0003c0018t0045g0052	6	106	0.0566	27	c.169 others(48): Show c.169+128631_169+128632insATGAATATATATGAATATATGATA TAT	CDH4	ENSG00000179242.16	transcript	ENST00000614565.5	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
CDH4_chr20_61247261_61945617	61565062	T T	TTGGTGGT others(20): Show TTGGTGGTGGTGGTGGTGGTGGTGGTGG	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01243.hp2 HG01358.hp2 others(4): Show HG00639.hp1 HG01243.hp2 HG01358.hp2 HG01496.hp2 HG01978.hp1 HG02895.hp1 NA18522.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0011 a0002c0004 others(1): Show a0001c0001 a0001c0011 a0002c0004 a0002c0005	a0001c0001t0001 a0001c0001t0028 a0001c0011t0008 others(2): Show a0001c0001t0001 a0001c0001t0028 a0001c0011t0008 a0002c0004t0027 a0002c0005t0007	a0001c0001t0001g0032 a0001c0001t0001g0046 a0001c0001t0001g0049 others(4): Show a0001c0001t0001g0032 a0001c0001t0001g0046 a0001c0001t0001g0049 a0001c0001t0028g0016 a0001c0011t0008g0003 a0002c0004t0027g0098 a0002c0005t0007g0100	7	106	0.0660	27	c.170 others(48): Show c.170-178475_170-178474insGTGGTGGTGGTGGTGGTGGTGGTG GTG	CDH4	ENSG00000179242.16	transcript	ENST00000614565.5	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
CDH4_chr20_61247261_61945617	61565254	G G	GTGGTGCT others(20): Show GTGGTGCTCTTGGTGGTGCTGGTCCTCT	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0021 a0001c0006t0021	a0001c0006t0021g0004 a0001c0006t0021g0004	1	106	0.0094	27	c.170 others(48): Show c.170-178307_170-178306insGTGCTCTTGGTGGTGCTGGTCCTC TTG	CDH4	ENSG00000179242.16	transcript	ENST00000614565.5	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
CDH7_chr18_65746012_65895337	65782023	T T	TTCTCCTT others(20): Show TTCTCCTTTCCTCTTCTCTTCTTCCTCC	intron_variant intron_variant	MODIFIER	HG02738.hp1 HG02738.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0199 a0001c0001t0005g0199	1	208	0.0048	27	c.210 others(46): Show c.210+18972_210+18973insCTCCTTTCCTCTTCTCTTCTTCCTCC T	CDH7	ENSG00000081138.14	transcript	ENST00000397968.4	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CDH7_chr18_65746012_65895337	65782028	C C	CTCTTTCT others(20): Show CTCTTTCTCTCTTTCTCCCTTTCTCCTT	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0079 a0002c0002t0079	a0002c0002t0079g0101 a0002c0002t0079g0101	1	208	0.0048	27	c.210 others(46): Show c.210+18976_210+18977insTCTTTCTCTCTTTCTCCCTTTCTCCT T	CDH7	ENSG00000081138.14	transcript	ENST00000397968.4	protein_coding	2/11			chr18	TogoVar
CDH8_chr16_61642250_62041438	61960025	C C	CAACATAT others(20): Show CAACATATATACATATATGTGTGTATGT	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0029 a0001c0002t0029	a0001c0002t0029g0005 a0001c0002t0029g0005	1	168	0.0060	27	c.253 others(46): Show c.253-58553_253-58552insACATACACACATATATGTATATATGT T	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	2/11			chr16	TogoVar
CDH9_chr5_26875597_27043586	26954388	C C	CTTTTTTT others(20): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01071.hp1 HG01109.hp1 HG01071.hp1 HG01109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0023 a0001c0001t0001g0025 a0001c0001t0001g0023 a0001c0001t0001g0025	2	240	0.0083	27	c.228 others(46): Show c.228+33717_228+33718insAAAAAAAAAAAAAAAAAAAAAAAAAA A	CDH9	ENSG00000113100.10	transcript	ENST00000231021.9	protein_coding	2/11			chr5	TogoVar
CDIN1_chr15_36574626_36815244	36718812	C C	CTTTTTTT others(20): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0017 a0002c0002t0017	a0002c0002t0017g0078 a0002c0002t0017g0078	1	238	0.0042	27	c.716 others(44): Show c.716+8874_716+8875insTTTTTTTTTTTTTTTTTTTTTTTTTTT	CDIN1	ENSG00000186073.14	transcript	ENST00000566621.6	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr15	TogoVar
CDIN1_chr15_36574626_36815244	36797979	C C	CAAAAAAA others(20): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02896.hp1 HG03130.hp1 HG02622.hp2 HG02896.hp1 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0108 a0001c0001t0008g0114 a0001c0001t0008g0131 a0001c0001t0008g0108 a0001c0001t0008g0114 a0001c0001t0008g0131	3	238	0.0126	27	c.717 others(46): Show c.717-10334_717-10333insAAAAAAAAAAAAAAAAAAAAAAAAAA A	CDIN1	ENSG00000186073.14	transcript	ENST00000566621.6	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr15	TogoVar
CDK11B_chr1_1630225_1664004	1650268	C C	CAAAAAAA others(20): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18971.hp2 NA18971.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0259 a0001c0003t0002g0259	1	446	0.0022	27	c.356 others(42): Show c.356-632_356-631insTTTTTTTTTTTTTTTTTTTTTTTTTTT	CDK11B	ENSG00000248333.9	transcript	ENST00000341832.11	protein_coding	4/19			chr1	TogoVar
CDK12_chr17_39456486_39539544	39476711	C C	CTTTTTTT others(20): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03579.hp1 NA19060.hp2 HG03209.hp1 HG03579.hp1 NA19060.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0002 a0001c0001t0004	a0001c0001t0002g0038 a0001c0001t0004g0014 a0001c0001t0004g0030 a0001c0001t0002g0038 a0001c0001t0004g0014 a0001c0001t0004g0030	3	260	0.0115	27	c.193 others(46): Show c.1931+4951_1931+4977dupTTTTTTTTTTTTTTTTTTTTTTTTTT T	CDK12	ENSG00000167258.16	transcript	ENST00000447079.6	protein_coding	2/13		INFO_REALIGN_3_PRIME	chr17	TogoVar
CDK13_chr7_39945256_40104580	40039434	A A	ATTTTTTT others(20): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01243.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0009 a0001c0003t0009	a0001c0003t0009g0304 a0001c0003t0009g0304	1	322	0.0031	27	c.235 others(46): Show c.2354-6379_2354-6378insTTTTTTTTTTTTTTTTTTTTTTTTTT T	CDK13	ENSG00000065883.18	transcript	ENST00000181839.10	protein_coding	5/13		INFO_REALIGN_3_PRIME	chr7	TogoVar
CDK14_chr7_90591321_91215590	91027850	T T	TCTCCCCT others(20): Show TCTCCCCTCCCCTCCCCTCTCCTCTCCC	intron_variant intron_variant	MODIFIER	HG04228.hp2 HG04228.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0066 a0001c0001t0014g0066	1	168	0.0060	27	c.104 others(48): Show c.1042-18029_1042-18028insTCCTCTCCCCTCCCCTCCCCTCCC CTC	CDK14	ENSG00000058091.17	transcript	ENST00000380050.8	protein_coding	10/14		INFO_REALIGN_3_PRIME	chr7	TogoVar
CDK14_chr7_90591321_91215590	91091517	A A	ATATATAT others(20): Show ATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0005	1	168	0.0060	27	c.115 others(48): Show c.1154+12037_1154+12038insTATATATATATATATATATATATA TAT	CDK14	ENSG00000058091.17	transcript	ENST00000380050.8	protein_coding	12/14			chr7	TogoVar
CDK15_chr2_201801537_201900550	201857232	C C	CAAAAAAA others(20): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03579.hp1 NA18906.hp1 HG03579.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0014 a0001c0001t0002 a0001c0001t0014	a0001c0001t0002g0192 a0001c0001t0014g0268 a0001c0001t0002g0192 a0001c0001t0014g0268	2	322	0.0062	27	c.100 others(46): Show c.1009+2311_1009+2312insAAAAAAAAAAAAAAAAAAAAAAAAAA A	CDK15	ENSG00000138395.17	transcript	ENST00000652192.3	protein_coding	10/13		INFO_REALIGN_3_PRIME	chr2	TogoVar
CDK19_chr6_110604978_110820469	110734561	C C	CTCTCTCT others(20): Show CTCTCTCTCTCTCTCTCTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG01496.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0020	a0001c0001t0020g0040 a0001c0001t0020g0040	1	300	0.0033	27	c.204 others(46): Show c.204+11564_204+11565insAGAGAGAGAGAGAGAGAGAGAGAGAG A	CDK19	ENSG00000155111.15	transcript	ENST00000368911.8	protein_coding	2/12			chr6	TogoVar
CDK19_chr6_110604978_110820469	110759424	A A	ATATAAAT others(20): Show ATATAAATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02257.hp2 HG02109.hp2 HG02257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0126 a0001c0001t0004g0129 a0001c0001t0004g0126 a0001c0001t0004g0129	2	300	0.0067	27	c.129 others(46): Show c.129-13224_129-13223insATATATATATATATATATATATTTAT A	CDK19	ENSG00000155111.15	transcript	ENST00000368911.8	protein_coding	1/12			chr6	TogoVar
CDK5RAP2_chr9_120383875_120585167	120507940	A A	ATATATAT others(20): Show ATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0012 a0012	a0012c0027 a0012c0027	a0012c0027t0001 a0012c0027t0001	a0012c0027t0001g0213 a0012c0027t0001g0213	1	232	0.0043	27	c.131 others(48): Show c.1311+10486_1311+10487insATATATATATATATATATATATAT ATA	CDK5RAP2	ENSG00000136861.19	transcript	ENST00000349780.9	protein_coding	12/37			chr9	TogoVar
CDKN2A_chr9_21962752_21979857	21971575	A A	ATTTTTTT others(20): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00408.hp1 NA20129.hp2 HG00408.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0097 a0001c0001t0002g0096 a0001c0001t0001g0097 a0001c0001t0002g0096	2	416	0.0048	27	c.151 others(42): Show c.151-368_151-367insAAAAAAAAAAAAAAAAAAAAAAAAAAA	CDKN2A	ENSG00000147889.18	transcript	ENST00000304494.10	protein_coding	1/2			chr9	TogoVar
CDKN2A_chr9_21962752_21999392	21971575	A A	ATTTTTTT others(20): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00408.hp1 NA20129.hp2 HG00408.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0350 a0001c0001t0002g0241 a0001c0001t0001g0350 a0001c0001t0002g0241	2	404	0.0050	27	c.194 others(42): Show c.194-368_194-367insAAAAAAAAAAAAAAAAAAAAAAAAAAA	CDKN2A	ENSG00000147889.18	transcript	ENST00000579755.2	protein_coding	1/2			chr9	TogoVar
CDKN2A_chr9_21962752_21999392	21990651	A A	AGAGAGAG others(20): Show AGAGAGAGAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG00741.hp1 HG00741.hp2 others(1): Show HG00558.hp2 HG00741.hp1 HG00741.hp2 HG03688.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0128 others(1): Show a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0128 a0001c0001t0001g0129	4	404	0.0099	27	c.193 others(44): Show c.193+3487_193+3488insCTCTCTCTCTCTCTCTCTCTCTCTCTC	CDKN2A	ENSG00000147889.18	transcript	ENST00000579755.2	protein_coding	1/2			chr9	TogoVar

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