Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LRIT3_chr4_109843107_109877315	109850418	C C	CTTTCTTT others(20): Show CTTTCTTTCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG01346.hp2 HG01346.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0075 a0001c0002t0001g0075	1	332	0.0030	27	c.117 others(44): Show c.117-1086_117-1085insTTTCTTTCTTTCTTTCTTTCTTTCTTT	LRIT3	ENSG00000183423.12	transcript	ENST00000594814.6	protein_coding	1/3			chr4	TogoVar
LRIT3_chr4_109843107_109877315	109850422	C C	CCTTCCTT others(20): Show CCTTCCTTCCTTCCTTCCTTCCTTCTTT	intron_variant intron_variant	MODIFIER	NA19060.hp1 NA19060.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0005 a0002c0001t0005	a0002c0001t0005g0214 a0002c0001t0005g0214	1	332	0.0030	27	c.117 others(44): Show c.117-1079_117-1078insCCTTCCTTCCTTCCTTCCTTCTTTCTT	LRIT3	ENSG00000183423.12	transcript	ENST00000594814.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr4	TogoVar
LRIT3_chr4_109843107_109877315	109850422	C C	CCTTCCTT others(20): Show CCTTCCTTCCTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	NA18939.hp1 NA18959.hp1 NA18939.hp1 NA18959.hp1	a0002 a0004 a0002 a0004	a0002c0001 a0004c0005 a0002c0001 a0004c0005	a0002c0001t0003 a0004c0005t0006 a0002c0001t0003 a0004c0005t0006	a0002c0001t0003g0220 a0004c0005t0006g0115 a0002c0001t0003g0220 a0004c0005t0006g0115	2	332	0.0060	27	c.117 others(44): Show c.117-1079_117-1078insCCTTCCTTCTTTCTTTCTTTCTTTCTT	LRIT3	ENSG00000183423.12	transcript	ENST00000594814.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr4	TogoVar
LRIT3_chr4_109843107_109877315	109850422	C C	CCTTCCTT others(20): Show CCTTCCTTCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG02004.hp2 HG02148.hp2 others(4): Show HG00639.hp1 HG02004.hp2 HG02148.hp2 HG02165.hp1 HG02647.hp1 HG03041.hp2 HG03831.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0002 a0002c0001 a0003c0003 others(1): Show a0001c0002 a0002c0001 a0003c0003 a0003c0007	a0001c0002t0001 a0002c0001t0011 a0003c0003t0002 others(2): Show a0001c0002t0001 a0002c0001t0011 a0003c0003t0002 a0003c0003t0014 a0003c0007t0002	a0001c0002t0001g0041 a0001c0002t0001g0042 a0002c0001t0011g0234 others(3): Show a0001c0002t0001g0041 a0001c0002t0001g0042 a0002c0001t0011g0234 a0003c0003t0002g0233 a0003c0003t0014g0016 a0003c0007t0002g0161	7	332	0.0211	27	c.117 others(44): Show c.117-1079_117-1078insCCTTCTTTCTTTCTTTCTTTCTTTCTT	LRIT3	ENSG00000183423.12	transcript	ENST00000594814.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr4	TogoVar
LRIT3_chr4_109843107_109877315	109850422	C C	CCTTCTTT others(20): Show CCTTCTTTCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01884.hp1 HG02809.hp1 others(4): Show HG01167.hp2 HG01884.hp1 HG02809.hp1 HG03927.hp2 NA18952.hp1 NA18966.hp1 NA18978.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0002 a0002c0001 a0003c0003 others(1): Show a0001c0002 a0002c0001 a0003c0003 a0003c0006	a0001c0002t0001 a0002c0001t0003 a0002c0001t0007 others(2): Show a0001c0002t0001 a0002c0001t0003 a0002c0001t0007 a0003c0003t0002 a0003c0006t0008	a0001c0002t0001g0048 a0001c0002t0001g0049 a0002c0001t0003g0252 others(4): Show a0001c0002t0001g0048 a0001c0002t0001g0049 a0002c0001t0003g0252 a0002c0001t0003g0253 a0002c0001t0007g0254 a0003c0003t0002g0251 a0003c0006t0008g0203	7	332	0.0211	27	c.117 others(44): Show c.117-1079_117-1078insCTTTCTTTCTTTCTTTCTTTCTTTCTT	LRIT3	ENSG00000183423.12	transcript	ENST00000594814.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr4	TogoVar
LRIT3_chr4_109843107_109877315	109850422	C C	CTTTCTTT others(20): Show CTTTCTTTCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01346.hp1 HG01496.hp2 others(6): Show HG01070.hp2 HG01346.hp1 HG01496.hp2 HG02615.hp1 HG02723.hp2 HG03130.hp1 HG03139.hp1 HG03471.hp1 NA19009.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0002 a0001c0004 a0002c0001 others(1): Show a0001c0002 a0001c0004 a0002c0001 a0003c0003	a0001c0002t0001 a0001c0004t0005 a0002c0001t0004 others(3): Show a0001c0002t0001 a0001c0004t0005 a0002c0001t0004 a0002c0001t0007 a0002c0001t0016 a0003c0003t0002	a0001c0002t0001g0010 a0001c0004t0005g0103 a0002c0001t0004g0276 others(5): Show a0001c0002t0001g0010 a0001c0004t0005g0103 a0002c0001t0004g0276 a0002c0001t0007g0275 a0002c0001t0007g0277 a0002c0001t0016g0274 a0003c0003t0002g0147 a0003c0003t0002g0173	9	332	0.0271	27	c.117 others(44): Show c.117-1082_117-1081insTTTCTTTCTTTCTTTCTTTCTTTCTTT	LRIT3	ENSG00000183423.12	transcript	ENST00000594814.6	protein_coding	1/3			chr4	TogoVar
LRMDA_chr10_75426624_76565168	76363176	A A	AGAAAGAA others(20): Show AGAAAGAAAGAAAGAAAGAGGGAGGGAG	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0032 a0001c0002t0005g0032	1	46	0.0217	27	c.601 others(46): Show c.601+38692_601+38693insAAAGAAAGAAAGAAAGAGGGAGGGAG G	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRP11_chr6_149813757_149869359	149859396	A A	ATATATAT others(20): Show ATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02083.hp1 NA18947.hp2 NA18951.hp2 others(5): Show HG02083.hp1 NA18947.hp2 NA18951.hp2 NA18957.hp1 NA18999.hp2 NA19002.hp1 NA19062.hp2 NA19091.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0010 a0001c0001t0001 a0001c0001t0002 a0001c0001t0010	a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0190 others(4): Show a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0002g0009 a0001c0001t0010g0187	8	334	0.0240	27	c.613 others(44): Show c.613+4011_613+4012insATATATATATATATATATATATATATA	LRP11	ENSG00000120256.11	transcript	ENST00000239367.7	protein_coding	1/6			chr6	TogoVar
LRP11_chr6_149813757_149869359	149859396	A A	ATATATAT others(20): Show ATATATATATATATATATATATATATTT	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG02015.hp2 NA18747.hp2 others(3): Show HG01168.hp1 HG02015.hp2 NA18747.hp2 NA18989.hp1 NA18998.hp2 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0147 a0001c0001t0001g0168 a0001c0001t0001g0169 others(3): Show a0001c0001t0001g0147 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0307	6	334	0.0180	27	c.613 others(44): Show c.613+4011_613+4012insAAATATATATATATATATATATATATA	LRP11	ENSG00000120256.11	transcript	ENST00000239367.7	protein_coding	1/6			chr6	TogoVar
LRP11_chr6_149813757_149869359	149859396	A A	ATATATAT others(20): Show ATATATATATATATATATATATATTTTT	intron_variant intron_variant	MODIFIER	NA18959.hp2 NA18995.hp2 NA18959.hp2 NA18995.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0236 a0002c0002t0001g0029 a0001c0001t0001g0236 a0002c0002t0001g0029	2	334	0.0060	27	c.613 others(44): Show c.613+4011_613+4012insAAAAATATATATATATATATATATATA	LRP11	ENSG00000120256.11	transcript	ENST00000239367.7	protein_coding	1/6			chr6	TogoVar
LRP11_chr6_149813757_149869359	149859396	A A	ATATATAT others(20): Show ATATATATATATATATATATATTTTTTT	intron_variant intron_variant	MODIFIER	NA18967.hp1 NA18967.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0064 a0002c0002t0001g0064	1	334	0.0030	27	c.613 others(44): Show c.613+4011_613+4012insAAAAAAATATATATATATATATATATA	LRP11	ENSG00000120256.11	transcript	ENST00000239367.7	protein_coding	1/6			chr6	TogoVar
LRP11_chr6_149813757_149869359	149859397	T T	TATATATA others(20): Show TATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02293.hp2 HG02895.hp2 HG02897.hp1 others(4): Show HG02293.hp2 HG02895.hp2 HG02897.hp1 NA18939.hp2 NA19062.hp1 NA19070.hp2 NA20300.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0005 a0001c0001 a0002c0005	a0001c0001t0001 a0002c0005t0007 a0001c0001t0001 a0002c0005t0007	a0001c0001t0001g0155 a0001c0001t0001g0206 a0001c0001t0001g0218 others(4): Show a0001c0001t0001g0155 a0001c0001t0001g0206 a0001c0001t0001g0218 a0001c0001t0001g0223 a0001c0001t0001g0229 a0002c0005t0007g0315 a0002c0005t0007g0316	7	334	0.0210	27	c.613 others(44): Show c.613+4010_613+4011insTATATATATATATATATATATATATAT	LRP11	ENSG00000120256.11	transcript	ENST00000239367.7	protein_coding	1/6			chr6	TogoVar
LRP12_chr8_104484236_104594258	104588964	A A	ACGCCGCC others(20): Show ACGCCGCCGCCGCCGCCGCCGCCGCCGC	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00741.hp1 HG00741.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0037 a0001c0001t0037	a0001c0001t0037g0043 a0001c0001t0037g0043	1	318	0.0031	27	c.-68 others(34): Show c.-68_-67insGCGGCGGCGGCGGCGGCGGCGGCGGCG	LRP12	ENSG00000147650.12	transcript	ENST00000276654.10	protein_coding	1/7	68		chr8	TogoVar
LRP1B_chr2_140226423_142136016	140399176	C C	CACACACA others(20): Show CACACACACACACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0017 a0001c0017	a0001c0017t0006 a0001c0017t0006	a0001c0017t0006g0015 a0001c0017t0006g0015	1	28	0.0357	27	c.104 others(50): Show c.10415-13168_10415-13167insTGTGTGTGTGTGTGTGTGTGTG TGTGT	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	66/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	140399176	C C	CACACATA others(20): Show CACACATACACACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01884.hp2 HG02145.hp2 others(3): Show HG01261.hp2 HG01884.hp2 HG02145.hp2 HG02486.hp2 HG02922.hp2 HG02965.hp1	a0001 a0001	a0001c0008 a0001c0016 a0001c0019 others(3): Show a0001c0008 a0001c0016 a0001c0019 a0001c0024 a0001c0026 a0001c0027	a0001c0008t0001 a0001c0016t0001 a0001c0019t0001 others(3): Show a0001c0008t0001 a0001c0016t0001 a0001c0019t0001 a0001c0024t0005 a0001c0026t0001 a0001c0027t0001	a0001c0008t0001g0008 a0001c0016t0001g0011 a0001c0019t0001g0016 others(3): Show a0001c0008t0001g0008 a0001c0016t0001g0011 a0001c0019t0001g0016 a0001c0024t0005g0009 a0001c0026t0001g0025 a0001c0027t0001g0021	6	28	0.2143	27	c.104 others(50): Show c.10415-13168_10415-13167insTGTGTGTGTGTGTGTGTGTGTA TGTGT	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	66/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	141331541	T T	TTTCTTTC others(20): Show TTTCTTTCTTTCTTTCTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG02723.hp2 NA19240.hp2 HG02723.hp2 NA19240.hp2	a0001 a0001	a0001c0013 a0001c0028 a0001c0013 a0001c0028	a0001c0013t0002 a0001c0028t0002 a0001c0013t0002 a0001c0028t0002	a0001c0013t0002g0012 a0001c0028t0002g0020 a0001c0013t0002g0012 a0001c0028t0002g0020	2	28	0.0714	27	c.344 others(46): Show c.344-76901_344-76900insGAAAGAAAGAAAGAAAGAAAGAAAGA A	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	3/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	141610323	A A	ATTATTAT others(20): Show ATTATTATTATACTTTAAAACTTAAAGT	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG01261.hp2 HG01884.hp1 others(3): Show HG01261.hp1 HG01261.hp2 HG01884.hp1 HG02145.hp2 HG02965.hp1 HG03225.hp1	a0001 a0002 a0001 a0002	a0001c0007 a0001c0019 a0001c0025 others(3): Show a0001c0007 a0001c0019 a0001c0025 a0001c0026 a0001c0027 a0002c0004	a0001c0007t0003 a0001c0019t0001 a0001c0025t0005 others(3): Show a0001c0007t0003 a0001c0019t0001 a0001c0025t0005 a0001c0026t0001 a0001c0027t0001 a0002c0004t0004	a0001c0007t0003g0003 a0001c0019t0001g0016 a0001c0025t0005g0018 others(3): Show a0001c0007t0003g0003 a0001c0019t0001g0016 a0001c0025t0005g0018 a0001c0026t0001g0025 a0001c0027t0001g0021 a0002c0004t0004g0006	6	28	0.2143	27	c.206 others(48): Show c.206-129791_206-129790insACTTTAAGTTTTAAAGTATAATAA TAA	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	2/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	141752945	G G	GAAAAAAA others(20): Show GAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02723.hp2 HG01884.hp2 HG02723.hp2	a0001 a0001	a0001c0016 a0001c0028 a0001c0016 a0001c0028	a0001c0016t0001 a0001c0028t0002 a0001c0016t0001 a0001c0028t0002	a0001c0016t0001g0011 a0001c0028t0002g0020 a0001c0016t0001g0011 a0001c0028t0002g0020	2	28	0.0714	27	c.205 others(46): Show c.205+57333_205+57334insTTTTTTTTTTTTTTTTTTTTTTTTTT T	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	2/90			chr2	TogoVar
LRP2BP_chr4_185358872_185400924	185388447	G G	GCCTACCT others(20): Show GCCTACCTACCTACCTATCATCTACCTA	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00735.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0216 a0001c0001t0001g0216	1	348	0.0029	27	c.-22 others(44): Show c.-22+6331_-22+6332insTAGGTAGATGATAGGTAGGTAGGTAGG	LRP2BP	ENSG00000109771.16	transcript	ENST00000505916.6	protein_coding	1/8			chr4	TogoVar
LRP2BP_chr4_185358872_185400924	185388447	G G	GCCTACCT others(20): Show GCCTACCTACCTATCAATCATCTACCTA	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00323.hp1 HG00408.hp1 others(267): Show HG00140.hp2 HG00323.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp2 HG01192.hp2 HG01243.hp1 HG01258.hp1 HG01261.hp1 HG01261.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02040.hp1 HG02055.hp1 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp2 HG02083.hp1 HG02109.hp2 HG02132.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02273.hp1 HG02273.hp2 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02698.hp1 HG02717.hp2 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02895.hp2 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03209.hp1 HG03225.hp1 HG03225.hp2 HG03239.hp2 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03942.hp2 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04204.hp2 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18951.hp1 NA18951.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18957.hp2 NA18960.hp1 NA18960.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18981.hp1 NA18981.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18988.hp1 NA18988.hp2 NA18990.hp2 NA18994.hp1 NA18994.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19054.hp1 NA19054.hp2 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19062.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19067.hp1 NA19067.hp2 NA19070.hp1 NA19074.hp1 NA19074.hp2 NA19079.hp1 NA19082.hp1 NA19082.hp2 NA19085.hp1 NA19085.hp2 NA19087.hp1 NA19087.hp2 NA19090.hp1 NA19090.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0002c0005 a0003c0006	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(86): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0012 a0001c0001t0014 a0001c0001t0015 a0001c0001t0019 a0001c0001t0021 a0001c0001t0022 a0001c0001t0023 a0001c0001t0025 a0001c0001t0027 a0001c0001t0028 a0001c0001t0029 a0001c0001t0030 a0001c0001t0035 a0001c0001t0038 a0001c0001t0060 a0001c0001t0061 a0001c0001t0062 a0001c0001t0064 a0001c0001t0066 a0001c0001t0068 a0001c0001t0071 a0001c0001t0072 a0001c0001t0073 a0001c0001t0074 a0001c0001t0075 a0001c0001t0076 a0001c0001t0077 a0001c0001t0078 a0001c0001t0079 a0001c0001t0080 a0001c0001t0081 a0001c0001t0083 a0001c0001t0085 a0001c0001t0090 a0001c0001t0093 a0001c0001t0096 a0001c0001t0097 a0001c0001t0099 a0001c0001t0101 a0001c0001t0106 a0001c0001t0108 a0001c0001t0118 a0001c0001t0120 a0001c0002t0002 a0001c0002t0005 a0001c0002t0007 a0001c0002t0008 a0001c0002t0013 a0001c0002t0018 a0001c0002t0020 a0001c0002t0024 a0001c0002t0031 a0001c0002t0037 a0001c0002t0039 a0001c0002t0059 a0001c0002t0086 a0001c0002t0087 a0001c0002t0088 a0001c0002t0089 a0001c0002t0091 a0001c0002t0111 a0001c0002t0112 a0001c0002t0113 a0001c0002t0114 a0001c0002t0115 a0001c0002t0119 a0001c0003t0009 a0001c0003t0010 a0001c0003t0023 a0001c0003t0026 a0001c0003t0032 a0001c0003t0048 a0001c0003t0063 a0001c0003t0065 a0001c0003t0067 a0001c0003t0070 a0001c0003t0082 a0001c0003t0084 a0001c0003t0092 a0001c0003t0094 a0001c0003t0095 a0001c0003t0098 a0001c0003t0102 a0001c0003t0116 a0002c0005t0003 a0003c0006t0109	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0005 others(255): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0077 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0084 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0094 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0100 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0117 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0123 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0129 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0138 a0001c0001t0001g0140 a0001c0001t0001g0142 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0149 a0001c0001t0001g0153 a0001c0001t0001g0155 a0001c0001t0001g0157 a0001c0001t0001g0162 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0172 a0001c0001t0001g0174 a0001c0001t0001g0179 a0001c0001t0001g0190 a0001c0001t0001g0203 a0001c0001t0001g0205 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0217 a0001c0001t0001g0219 a0001c0001t0001g0224 a0001c0001t0001g0227 a0001c0001t0003g0003 a0001c0001t0003g0079 a0001c0001t0003g0109 a0001c0001t0003g0115 a0001c0001t0003g0116 a0001c0001t0003g0124 a0001c0001t0003g0136 a0001c0001t0003g0137 a0001c0001t0003g0143 a0001c0001t0003g0154 a0001c0001t0003g0158 a0001c0001t0003g0163 a0001c0001t0003g0220 a0001c0001t0003g0221 a0001c0001t0003g0222 a0001c0001t0003g0225 a0001c0001t0004g0274 a0001c0001t0004g0313 a0001c0001t0012g0242 a0001c0001t0012g0245 a0001c0001t0012g0246 a0001c0001t0012g0247 a0001c0001t0012g0248 a0001c0001t0012g0249 a0001c0001t0012g0254 a0001c0001t0014g0148 a0001c0001t0014g0150 a0001c0001t0014g0159 a0001c0001t0014g0160 a0001c0001t0014g0161 a0001c0001t0015g0315 a0001c0001t0015g0316 a0001c0001t0019g0002 a0001c0001t0019g0073 a0001c0001t0021g0234 a0001c0001t0021g0235 a0001c0001t0021g0236 a0001c0001t0022g0238 a0001c0001t0022g0252 a0001c0001t0022g0256 a0001c0001t0023g0261 a0001c0001t0023g0275 a0001c0001t0025g0060 a0001c0001t0025g0062 a0001c0001t0027g0071 a0001c0001t0027g0072 a0001c0001t0028g0151 a0001c0001t0028g0152 a0001c0001t0029g0147 a0001c0001t0029g0180 a0001c0001t0030g0093 a0001c0001t0030g0223 a0001c0001t0035g0268 a0001c0001t0035g0277 a0001c0001t0038g0333 a0001c0001t0038g0334 a0001c0001t0060g0057 a0001c0001t0061g0054 a0001c0001t0062g0056 a0001c0001t0064g0055 a0001c0001t0066g0061 a0001c0001t0068g0064 a0001c0001t0071g0069 a0001c0001t0072g0070 a0001c0001t0073g0141 a0001c0001t0074g0095 a0001c0001t0075g0085 a0001c0001t0076g0132 a0001c0001t0077g0112 a0001c0001t0078g0076 a0001c0001t0079g0177 a0001c0001t0080g0078 a0001c0001t0081g0210 a0001c0001t0083g0178 a0001c0001t0085g0122 a0001c0001t0090g0228 a0001c0001t0093g0231 a0001c0001t0096g0255 a0001c0001t0097g0241 a0001c0001t0099g0264 a0001c0001t0101g0312 a0001c0001t0106g0267 a0001c0001t0108g0269 a0001c0001t0118g0330 a0001c0001t0120g0336 a0001c0002t0002g0082 a0001c0002t0002g0092 a0001c0002t0002g0118 a0001c0002t0002g0119 a0001c0002t0002g0130 a0001c0002t0002g0175 a0001c0002t0002g0176 a0001c0002t0002g0181 a0001c0002t0002g0182 a0001c0002t0002g0184 a0001c0002t0002g0185 a0001c0002t0002g0186 a0001c0002t0002g0189 a0001c0002t0002g0191 a0001c0002t0002g0192 a0001c0002t0002g0193 a0001c0002t0002g0194 a0001c0002t0002g0195 a0001c0002t0002g0202 a0001c0002t0002g0204 a0001c0002t0002g0213 a0001c0002t0002g0218 a0001c0002t0005g0011 a0001c0002t0005g0322 a0001c0002t0005g0323 a0001c0002t0005g0324 a0001c0002t0007g0098 a0001c0002t0007g0131 a0001c0002t0007g0183 a0001c0002t0007g0187 a0001c0002t0007g0197 a0001c0002t0007g0199 a0001c0002t0007g0201 a0001c0002t0007g0206 a0001c0002t0008g0007 a0001c0002t0008g0074 a0001c0002t0008g0139 a0001c0002t0008g0167 a0001c0002t0008g0171 a0001c0002t0008g0173 a0001c0002t0008g0196 a0001c0002t0013g0258 a0001c0002t0013g0259 a0001c0002t0013g0263 a0001c0002t0018g0050 a0001c0002t0020g0083 a0001c0002t0020g0128 a0001c0002t0020g0226 a0001c0002t0024g0257 a0001c0002t0024g0260 a0001c0002t0024g0262 a0001c0002t0031g0188 a0001c0002t0031g0200 a0001c0002t0037g0009 a0001c0002t0039g0331 a0001c0002t0039g0332 a0001c0002t0059g0053 a0001c0002t0086g0127 a0001c0002t0087g0099 a0001c0002t0088g0075 a0001c0002t0089g0198 a0001c0002t0091g0229 a0001c0002t0111g0270 a0001c0002t0112g0266 a0001c0002t0113g0272 a0001c0002t0114g0276 a0001c0002t0115g0265 a0001c0002t0119g0335 a0001c0003t0009g0008 a0001c0003t0009g0239 a0001c0003t0009g0240 a0001c0003t0009g0243 a0001c0003t0009g0244 a0001c0003t0009g0251 a0001c0003t0009g0253 a0001c0003t0010g0010 a0001c0003t0010g0314 a0001c0003t0010g0317 a0001c0003t0010g0318 a0001c0003t0010g0319 a0001c0003t0010g0320 a0001c0003t0010g0321 a0001c0003t0023g0310 a0001c0003t0026g0066 a0001c0003t0026g0067 a0001c0003t0032g0232 a0001c0003t0032g0233 a0001c0003t0048g0051 a0001c0003t0063g0058 a0001c0003t0065g0059 a0001c0003t0067g0063 a0001c0003t0070g0068 a0001c0003t0082g0156 a0001c0003t0084g0101 a0001c0003t0092g0230 a0001c0003t0094g0237 a0001c0003t0095g0250 a0001c0003t0098g0311 a0001c0003t0102g0278 a0001c0003t0116g0328 a0002c0005t0003g0107 a0003c0006t0109g0271	270	348	0.7759	27	c.-22 others(44): Show c.-22+6331_-22+6332insTAGGTAGATGATTGATAGGTAGGTAGG	LRP2BP	ENSG00000109771.16	transcript	ENST00000505916.6	protein_coding	1/8			chr4	TogoVar
LRP2_chr2_169122109_169367534	169326172	C C	CTCCCTCT others(20): Show CTCCCTCTCTCTCTCTCCTCTCTCCTCT	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0005 a0005	a0005c0014 a0005c0014	a0005c0014t0007 a0005c0014t0007	a0005c0014t0007g0139 a0005c0014t0007g0139	1	250	0.0040	27	c.80- others(42): Show c.80-5289_80-5288insAGAGGAGAGAGGAGAGAGAGAGAGGGA	LRP2	ENSG00000081479.15	transcript	ENST00000649046.1	protein_coding	1/78			chr2	TogoVar
LRP2_chr2_169122109_169367534	169360128	C C	CAAAAAAA others(20): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0012 a0012	a0012c0101 a0012c0101	a0012c0101t0004 a0012c0101t0004	a0012c0101t0004g0013 a0012c0101t0004g0013	1	250	0.0040	27	c.79+ others(42): Show c.79+2192_79+2193insTTTTTTTTTTTTTTTTTTTTTTTTTTT	LRP2	ENSG00000081479.15	transcript	ENST00000649046.1	protein_coding	1/78			chr2	TogoVar
LRP4_chr11_46851717_46923550	46857584	G G	GGGAGATT others(20): Show GGGAGATTTATTCAGCCCTCCCACCAGC	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0012 a0005c0005t0012	a0005c0005t0012g0117 a0005c0005t0012g0117	1	276	0.0036	27	c.13 others(38): Show c.1398_*1399insGCTGGTGGGAGGGCTGAATAAATCTCC	LRP4	ENSG00000134569.10	transcript	ENST00000378623.6	protein_coding	38/38	1398		chr11	TogoVar
LRP5_chr11_68307591_68454275	68409073	A A	AAAAAAAA others(20): Show AAAAAAAAATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0003 a0003	a0003c0016 a0003c0016	a0003c0016t0001 a0003c0016t0001	a0003c0016t0001g0027 a0003c0016t0001g0027	1	212	0.0047	27	c.209 others(44): Show c.2092-840_2092-839insAAAAAAATATATATATATATATATATA	LRP5	ENSG00000162337.12	transcript	ENST00000294304.12	protein_coding	9/22		INFO_REALIGN_3_PRIME	chr11	TogoVar
LRP5_chr11_68307591_68454275	68409073	A A	AAAAAAAT others(20): Show AAAAAAATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0001 a0001	a0001c0019 a0001c0019	a0001c0019t0001 a0001c0019t0001	a0001c0019t0001g0113 a0001c0019t0001g0113	1	212	0.0047	27	c.209 others(44): Show c.2092-840_2092-839insAAAAATATATATATATATATATATATA	LRP5	ENSG00000162337.12	transcript	ENST00000294304.12	protein_coding	9/22		INFO_REALIGN_3_PRIME	chr11	TogoVar
LRP5_chr11_68307591_68454275	68409073	A A	AAAAATAT others(20): Show AAAAATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0204 a0001c0002t0001g0204	1	212	0.0047	27	c.209 others(44): Show c.2092-840_2092-839insAAATATATATATATATATATATATATA	LRP5	ENSG00000162337.12	transcript	ENST00000294304.12	protein_coding	9/22		INFO_REALIGN_3_PRIME	chr11	TogoVar
LRP6_chr12_12111025_12272044	12164919	T T	TAAAAAAA others(20): Show TAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02148.hp2 HG02148.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0005 a0002c0002t0005	a0002c0002t0005g0091 a0002c0002t0005g0091	1	262	0.0038	27	c.176 others(44): Show c.1762+133_1762+159dupTTTTTTTTTTTTTTTTTTTTTTTTTTT	LRP6	ENSG00000070018.9	transcript	ENST00000261349.9	protein_coding	8/22			chr12	TogoVar
LRP6_chr12_12111025_12272044	12257779	C C	CAAAAAAA others(20): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0045 a0001c0003t0045	a0001c0003t0045g0262 a0001c0003t0045g0262	1	262	0.0038	27	c.55+ others(42): Show c.55+8875_55+8901dupTTTTTTTTTTTTTTTTTTTTTTTTTTT	LRP6	ENSG00000070018.9	transcript	ENST00000261349.9	protein_coding	1/22			chr12	TogoVar
LRP8_chr1_53237364_53333070	53237673	C C	CAAAAAAA others(20): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0036 a0001c0006t0036	a0001c0006t0036g0012 a0001c0006t0036g0012	1	296	0.0034	27	c.93 others(38): Show c.9344_*9345insTTTTTTTTTTTTTTTTTTTTTTTTTTT	LRP8	ENSG00000157193.18	transcript	ENST00000306052.12	protein_coding		4690		chr1	TogoVar
LRP8_chr1_53237364_53333070	53283674	C C	CACGTACT others(20): Show CACGTACTTACTACATACCGGGCCACTT	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG01175.hp2	a0003 a0003	a0003c0005 a0003c0005	a0003c0005t0002 a0003c0005t0002	a0003c0005t0002g0093 a0003c0005t0002g0093	1	296	0.0034	27	c.368 others(44): Show c.368-2960_368-2959insAAGTGGCCCGGTATGTAGTAAGTACGT	LRP8	ENSG00000157193.18	transcript	ENST00000306052.12	protein_coding	3/18			chr1	TogoVar
LRPPRC_chr2_43881224_44000989	43887143	C C	CAAAAAAA others(20): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00423.hp1 HG00423.hp1	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0055 a0001c0009t0055	a0001c0009t0055g0156 a0001c0009t0055g0156	1	358	0.0028	27	c.14 others(38): Show c.1456_*1457insTTTTTTTTTTTTTTTTTTTTTTTTTTT	LRPPRC	ENSG00000138095.20	transcript	ENST00000260665.12	protein_coding	38/38	1456		chr2	TogoVar
LRRC27_chr10_132327193_132386508	132369272	T T	TTACCCAA others(20): Show TTACCCAAAGGAGATGAAAACTTATGTC	intron_variant intron_variant	MODIFIER	HG02293.hp1 HG02293.hp1	a0003 a0003	a0003c0008 a0003c0008	a0003c0008t0007 a0003c0008t0007	a0003c0008t0007g0084 a0003c0008t0007g0084	1	290	0.0035	27	c.141 others(46): Show c.1416+3726_1416+3752dupCCAAAGGAGATGAAAACTTATGTCTA C	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC28_chr15_99246481_99395729	99282177	G G	GTTTTTTT others(20): Show GTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02698.hp2 HG03098.hp2 HG03492.hp2 HG02698.hp2 HG03098.hp2 HG03492.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0012 a0001c0001t0189 a0001c0001t0001 a0001c0001t0012 a0001c0001t0189	a0001c0001t0001g0327 a0001c0001t0012g0021 a0001c0001t0189g0277 a0001c0001t0001g0327 a0001c0001t0012g0021 a0001c0001t0189g0277	3	332	0.0090	27	c.210 others(44): Show c.210-5066_210-5065insTTTTTTTTTTTTTTTTTTTTTTTTTTT	LRRC28	ENSG00000168904.15	transcript	ENST00000301981.8	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
LRRC3_chr21_44450510_44467196	44466070	T T	TGCTCACT others(20): Show TGCTCACTCTCCCTGTACACACACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00642.hp2 HG00642.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	426	0.0024	27	c.86 others(38): Show c.8652_*8653insGCTCACTCTCCCTGTACACACACACAC	LRRC3	ENSG00000160233.8	transcript	ENST00000291592.6	protein_coding		3875		chr21	TogoVar
LRRC40_chr1_70139805_70210579	70190677	T T	TAAAAAAA others(20): Show TAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG00738.hp1 HG01167.hp2 others(9): Show HG00673.hp2 HG00738.hp1 HG01167.hp2 HG02135.hp2 HG02572.hp1 HG04115.hp1 HG04228.hp1 NA18940.hp1 NA18983.hp2 NA18989.hp1 NA19084.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0039 others(7): Show a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0039 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0113 a0001c0001t0001g0124 a0001c0001t0001g0150	12	320	0.0375	27	c.152 others(44): Show c.152-1405_152-1404insTTTTTTTTTTTTTTTTTTTTTTTTTTT	LRRC40	ENSG00000066557.6	transcript	ENST00000370952.4	protein_coding	1/14			chr1	TogoVar
LRRC4C_chr11_40109209_41464652	41448122	G G	GTTTTTTT others(20): Show GTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0027 a0001c0001t0001g0027	1	48	0.0208	27	c.-49 others(48): Show c.-496+11308_-496+11309insAAAAAAAAAAAAAAAAAAAAAAAA AAA	LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	1/6			chr11	TogoVar
LRRC57_chr15_42532829_42553793	42544838	C C	CTATATAT others(20): Show CTATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00642.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0074 a0001c0001t0074	a0001c0001t0074g0130 a0001c0001t0074g0130	1	356	0.0028	27	c.678 others(42): Show c.678+238_678+239insATATATATATATATATATATATATATA	LRRC57	ENSG00000180979.10	transcript	ENST00000397130.8	protein_coding	5/5			chr15	TogoVar
LRRC69_chr8_91097619_91224257	91176134	A A	ATATATAT others(20): Show ATATATATATATATATATATATATTTTT	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01261.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0304 a0001c0001t0001g0304	1	318	0.0031	27	c.652 others(46): Show c.652-13387_652-13386insATATATATATATATATATATATTTTT T	LRRC69	ENSG00000214954.9	transcript	ENST00000448384.3	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr8	TogoVar
LRRC71_chr1_156915632_156938094	156928363	C C	CTCCTCTT others(20): Show CTCCTCTTCTTCTTCTTCTTCTTCTTCT	intron_variant intron_variant	MODIFIER	HG02738.hp2 NA19068.hp2 HG02738.hp2 NA19068.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0064 a0001c0001t0001g0067 a0001c0001t0001g0064 a0001c0001t0001g0067	2	402	0.0050	27	c.996 others(42): Show c.996+361_996+362insCTCTTCTTCTTCTTCTTCTTCTTCTTC	LRRC71	ENSG00000160838.14	transcript	ENST00000337428.8	protein_coding	9/14		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC71_chr1_156915632_156938094	156928363	C C	CTCTTCTT others(20): Show CTCTTCTTCTTCTTCTTCTTCTTCTTCT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG01070.hp2 HG01071.hp2 others(33): Show HG00280.hp2 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01167.hp2 HG01169.hp1 HG01255.hp1 HG01255.hp2 HG01361.hp2 HG01891.hp2 HG01928.hp2 HG01943.hp1 HG01981.hp1 HG01981.hp2 HG02074.hp2 HG02080.hp1 HG02622.hp2 HG02698.hp1 HG02738.hp1 HG02818.hp2 HG02895.hp1 HG02976.hp1 HG03209.hp2 HG03710.hp2 HG03942.hp1 NA18906.hp2 NA18951.hp1 NA18967.hp2 NA18971.hp2 NA18999.hp1 NA19007.hp2 NA19009.hp1 NA19070.hp2 NA19078.hp2 NA19089.hp2 NA20752.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0009	a0001c0001 a0001c0003 a0002c0002 others(2): Show a0001c0001 a0001c0003 a0002c0002 a0003c0004 a0009c0010	a0001c0001t0001 a0001c0003t0001 a0002c0002t0001 others(2): Show a0001c0001t0001 a0001c0003t0001 a0002c0002t0001 a0003c0004t0001 a0009c0010t0001	a0001c0001t0001g0014 a0001c0001t0001g0059 a0001c0001t0001g0095 others(29): Show a0001c0001t0001g0014 a0001c0001t0001g0059 a0001c0001t0001g0095 a0001c0001t0001g0100 a0001c0001t0001g0159 a0001c0001t0001g0234 a0001c0001t0001g0248 a0001c0001t0001g0253 a0001c0001t0001g0255 a0001c0001t0001g0267 a0001c0001t0001g0269 a0001c0001t0001g0292 a0001c0001t0001g0294 a0001c0001t0001g0295 a0001c0001t0001g0302 a0001c0001t0001g0309 a0001c0003t0001g0268 a0002c0002t0001g0011 a0002c0002t0001g0092 a0002c0002t0001g0104 a0002c0002t0001g0105 a0002c0002t0001g0106 a0002c0002t0001g0128 a0002c0002t0001g0129 a0002c0002t0001g0166 a0002c0002t0001g0167 a0002c0002t0001g0202 a0002c0002t0001g0207 a0002c0002t0001g0208 a0003c0004t0001g0301 a0003c0004t0001g0308 a0009c0010t0001g0223	36	402	0.0896	27	c.996 others(42): Show c.996+377_996+403dupTTCTTCTTCTTCTTCTTCTTCTTCTTC	LRRC71	ENSG00000160838.14	transcript	ENST00000337428.8	protein_coding	9/14		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC71_chr1_156915632_156938094	156928404	C C	CTTCTTCT others(20): Show CTTCTTCTTCTTCTTCTTCTTCCTCTTA	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0001 a0003c0004t0001	a0003c0004t0001g0072 a0003c0004t0001g0072	1	402	0.0025	27	c.996 others(42): Show c.996+403_996+404insTTCTTCTTCTTCTTCTTCCTCTTATTC	LRRC71	ENSG00000160838.14	transcript	ENST00000337428.8	protein_coding	9/14		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC75A_chr17_16436577_16497193	16496081	T T	TTTATTTG others(20): Show TTTATTTGAGACAGAGTCTCAAATAAAC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18973.hp2 NA18973.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0204 a0001c0002t0001g0204	1	342	0.0029	27	c.-40 others(38): Show c.-4092_-4091insGTTTATTTGAGACTCTGTCTCAAATAA	LRRC75A	ENSG00000181350.12	transcript	ENST00000470794.2	protein_coding		3889		chr17	TogoVar
LRRC7_chr1_69562922_70149364	69865469	C C	CTTTTTTT others(20): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG01496.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0085 a0001c0001t0085	a0001c0001t0085g0089 a0001c0001t0085g0089	1	108	0.0093	27	c.647 others(46): Show c.647+27211_647+27212insTTTTTTTTTTTTTTTTTTTTTTTTTT T	LRRC7	ENSG00000033122.21	transcript	ENST00000651989.2	protein_coding	7/26		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC8C_chr1_89628120_89724533	89708630	T T	TCCCTGGT others(20): Show TCCCTGGTTCCAGCTCCAAAATAGAACA	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02897.hp1 HG02895.hp2 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0082 a0001c0001t0002g0089 a0001c0001t0002g0082 a0001c0001t0002g0089	2	268	0.0075	27	c.139 others(44): Show c.139-4079_139-4078insCCCTGGTTCCAGCTCCAAAATAGAACA	LRRC8C	ENSG00000171488.15	transcript	ENST00000370454.9	protein_coding	2/2			chr1	TogoVar
LRRIQ1_chr12_85031351_85250105	85174701	C C	CAAAAAAA others(20): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG01358.hp2 HG00323.hp2 HG01358.hp2	a0002 a0003 a0002 a0003	a0002c0003 a0003c0004 a0002c0003 a0003c0004	a0002c0003t0001 a0003c0004t0001 a0002c0003t0001 a0003c0004t0001	a0002c0003t0001g0169 a0003c0004t0001g0206 a0002c0003t0001g0169 a0003c0004t0001g0206	2	228	0.0088	27	c.482 others(48): Show c.4822+14009_4822+14010insAAAAAAAAAAAAAAAAAAAAAAAA AAA	LRRIQ1	ENSG00000133640.20	transcript	ENST00000393217.7	protein_coding	24/26		INFO_REALIGN_3_PRIME	chr12	TogoVar
LRRIQ4_chr3_169807870_169842773	169830377	G G	GAAAAAAA others(20): Show GAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0283 a0001c0001t0001g0283	1	386	0.0026	27	c.119 others(43): Show c.1195-109_1195-83dupAAAAAAAAAAAAAAAAAAAAAAAAAAA	LRRIQ4	ENSG00000188306.7	transcript	ENST00000340806.7	protein_coding	3/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRRK2_chr12_40219997_40374285	40298860	A A	ATATTATA others(20): Show ATATTATATATATACTATATATAATACT	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG01243.hp1 HG02129.hp2 others(9): Show HG00609.hp2 HG01243.hp1 HG02129.hp2 NA18953.hp2 NA18964.hp2 NA18968.hp2 NA18972.hp1 NA18988.hp2 NA19056.hp1 NA19078.hp1 NA19080.hp1 NA19091.hp1	a0001 a0003 a0001 a0003	a0001c0002 a0001c0008 a0003c0021 a0001c0002 a0001c0008 a0003c0021	a0001c0002t0002 a0001c0008t0002 a0003c0021t0001 a0001c0002t0002 a0001c0008t0002 a0003c0021t0001	a0001c0002t0002g0219 a0001c0002t0002g0224 a0001c0002t0002g0225 others(9): Show a0001c0002t0002g0219 a0001c0002t0002g0224 a0001c0002t0002g0225 a0001c0002t0002g0226 a0001c0002t0002g0227 a0001c0002t0002g0242 a0001c0002t0002g0269 a0001c0002t0002g0271 a0001c0008t0002g0090 a0003c0021t0001g0237 a0003c0021t0001g0238 a0003c0021t0001g0246	12	382	0.0314	27	c.334 others(44): Show c.3348-208_3348-182dupCTATATATAATACTTATTATATATATA	LRRK2	ENSG00000188906.17	transcript	ENST00000298910.12	protein_coding	24/50		INFO_REALIGN_3_PRIME	chr12	TogoVar
LRRK2_chr12_40219997_40374285	40298914	T T	TTATTATA others(20): Show TTATTATATATATACTATATATAATACG	intron_variant intron_variant	MODIFIER	NA19006.hp1 NA19006.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0275 a0001c0002t0002g0275	1	382	0.0026	27	c.334 others(44): Show c.3348-182_3348-181insCTATATATAATACGTATTATATATATA	LRRK2	ENSG00000188906.17	transcript	ENST00000298910.12	protein_coding	24/50		INFO_REALIGN_3_PRIME	chr12	TogoVar
LRRTM3_chr10_66921036_67106551	66978552	A A	AAATATAT others(20): Show AAATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18941.hp2 NA18941.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0015 a0001c0001t0001g0015	1	294	0.0034	27	c.153 others(48): Show c.1536+50101_1536+50102insATATATATATATATATATATATAT ATA	LRRTM3	ENSG00000198739.11	transcript	ENST00000361320.5	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRTM4_chr2_76742685_77527376	76812791	T T	TCCCCCCT others(20): Show TCCCCCCTTCCTCCTCCTCTCCCTCCCC	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0127 a0001c0001t0002g0127	1	128	0.0078	27	c.155 others(48): Show c.1552-63876_1552-63875insGGGGAGGGAGAGGAGGAGGAAGGG GGG	LRRTM4	ENSG00000176204.14	transcript	ENST00000409884.6	protein_coding	3/3			chr2	TogoVar

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