Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
GPAA1_chr8_144077634_144091216	144089687	C C	CATATATA others(21): Show CATATATATATATATACATATACATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02165.hp1 HG02165.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	338	0.0030	28	c.35 others(39): Show c.3562_*3563insATATATATATATATACATATACATATAT	GPAA1	ENSG00000197858.12	transcript	ENST00000355091.9	protein_coding		3472		chr8	TogoVar
GPALPP1_chr13_44984538_45035305	44995169	A A	AACACACA others(21): Show AACACACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG01243.hp2 HG02080.hp2 others(9): Show HG00673.hp2 HG01243.hp2 HG02080.hp2 HG02132.hp2 HG02258.hp1 HG02523.hp1 HG02622.hp1 HG02886.hp2 HG03486.hp1 NA18941.hp2 NA18992.hp1 NA18995.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(2): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0010	a0001c0001t0002g0282 a0001c0001t0003g0045 a0001c0001t0003g0232 others(9): Show a0001c0001t0002g0282 a0001c0001t0003g0045 a0001c0001t0003g0232 a0001c0001t0003g0233 a0001c0001t0003g0254 a0001c0001t0004g0278 a0001c0001t0004g0279 a0001c0001t0004g0280 a0001c0001t0006g0283 a0001c0001t0006g0284 a0001c0001t0010g0211 a0001c0001t0010g0281	12	348	0.0345	28	c.88+ others(43): Show c.88+5434_88+5461dupACACACACACACACACACACACACACAC	GPALPP1	ENSG00000133114.18	transcript	ENST00000379151.9	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPAT3_chr4_83531108_83610875	83533060	A A	ACATATAT others(21): Show ACATATATATACATATGTGTATATATATG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01168.hp1 HG01169.hp1 HG01433.hp1 others(6): Show HG01168.hp1 HG01169.hp1 HG01433.hp1 HG01496.hp2 HG02293.hp2 HG03130.hp1 NA18906.hp1 NA18959.hp2 NA19002.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0009 a0001c0001t0001 a0001c0001t0009	a0001c0001t0001g0067 a0001c0001t0001g0106 a0001c0001t0001g0107 others(6): Show a0001c0001t0001g0067 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0009g0007 a0001c0001t0009g0008	9	334	0.0270	28	c.-35 others(39): Show c.-3563_-3562insCATATATATACATATGTGTATATATATG	GPAT3	ENSG00000138678.11	transcript	ENST00000264409.5	protein_coding		3047		chr4	TogoVar
GPAT3_chr4_83531108_83610875	83533073	T T	TATGTGTA others(21): Show TATGTGTATATATATGCATATATATACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02572.hp2 NA19240.hp2 HG02572.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0001g0225 a0001c0001t0001g0226	2	334	0.0060	28	c.-35 others(39): Show c.-3550_-3549insATGTGTATATATATGCATATATATACAC	GPAT3	ENSG00000138678.11	transcript	ENST00000264409.5	protein_coding		3034		chr4	TogoVar
GPAT3_chr4_83531108_83610875	83562183	A A	ATATATAT others(21): Show ATATATATATATATATAATATATATATAT	intron_variant intron_variant	MODIFIER	HG03209.hp2 NA19043.hp2 HG03209.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0122 a0001c0001t0001g0124 a0001c0001t0001g0122 a0001c0001t0001g0124	2	334	0.0060	28	c.208 others(47): Show c.208+17596_208+17623dupTAATATATATATATTATATATATATA TA	GPAT3	ENSG00000138678.11	transcript	ENST00000264409.5	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr4	TogoVar
GPAT3_chr4_83531108_83610875	83579081	C C	CCCTTCCT others(21): Show CCCTTCCTTCCTTCCTTCCTTCCTTCCTT	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0119 a0001c0001t0001g0119	1	334	0.0030	28	c.209 others(45): Show c.209-2460_209-2433dupCCTTCCTTCCTTCCTTCCTTCCTTCCTT	GPAT3	ENSG00000138678.11	transcript	ENST00000264409.5	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr4	TogoVar
GPATCH2_chr1_217421992_217636090	217584344	A A	AAAAAAAA others(21): Show AAAAAAAAAAAAAAAATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18962.hp1 NA18962.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0091 a0001c0001t0001g0091	1	188	0.0053	28	c.109 others(49): Show c.1098+25976_1098+25977insATATATATATATATTTTTTTTTTT TTTT	GPATCH2	ENSG00000092978.11	transcript	ENST00000366935.8	protein_coding	5/9			chr1	TogoVar
GPATCH8_chr17_44390281_44508406	44414115	A A	ATGTATAT others(21): Show ATGTATATATATGTGTATATATATATATG	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00438.hp2 HG00639.hp2 others(10): Show HG00280.hp2 HG00438.hp2 HG00639.hp2 HG00738.hp1 HG01175.hp2 HG01255.hp2 HG02074.hp2 HG03831.hp2 NA18747.hp1 NA18957.hp2 NA18973.hp1 NA19077.hp1 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0037 a0001c0001t0001g0183 a0001c0001t0001g0184 others(10): Show a0001c0001t0001g0037 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0196 a0001c0001t0001g0197	13	326	0.0399	28	c.493 others(45): Show c.493-8092_493-8065dupCATATATATATATACACATATATATACA	GPATCH8	ENSG00000186566.13	transcript	ENST00000591680.6	protein_coding	6/7			chr17	TogoVar
GPATCH8_chr17_44390281_44508406	44429649	A A	AACACACA others(21): Show AACACACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	NA19090.hp2 NA19090.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0202 a0001c0002t0001g0202	1	326	0.0031	28	c.349 others(45): Show c.349-5185_349-5158dupGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GPATCH8	ENSG00000186566.13	transcript	ENST00000591680.6	protein_coding	5/7			chr17	TogoVar
GPATCH8_chr17_44390281_44508406	44453494	G G	GGTGTGTG others(21): Show GGTGTGTGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG02004.hp2 HG02735.hp1 others(4): Show HG01106.hp2 HG02004.hp2 HG02735.hp1 HG02895.hp2 HG02965.hp2 NA18994.hp1 NA20129.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0215 a0001c0002t0001g0222 a0001c0002t0001g0235 others(4): Show a0001c0002t0001g0215 a0001c0002t0001g0222 a0001c0002t0001g0235 a0001c0002t0001g0246 a0001c0002t0001g0287 a0001c0002t0001g0289 a0001c0002t0001g0291	7	326	0.0215	28	c.193 others(47): Show c.193+10977_193+10978insACACACACACACACACACACACACAC AC	GPATCH8	ENSG00000186566.13	transcript	ENST00000591680.6	protein_coding	3/7			chr17	TogoVar
GPATCH8_chr17_44390281_44508406	44453500	G G	GGTGTGTG others(21): Show GGTGTGTGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG03209.hp2 HG02965.hp1 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0149 a0001c0001t0001g0150	2	326	0.0061	28	c.193 others(47): Show c.193+10944_193+10971dupACACACACACACACACACACACACAC AC	GPATCH8	ENSG00000186566.13	transcript	ENST00000591680.6	protein_coding	3/7			chr17	TogoVar
GPATCH8_chr17_44390281_44508406	44483176	A A	AAAAAAAA others(21): Show AAAAAAAAAAAAAAAAAATATATATATAT	intron_variant intron_variant	MODIFIER	NA19070.hp2 NA20905.hp2 NA19070.hp2 NA20905.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0001 a0001c0003t0001 a0001c0002t0001 a0001c0003t0001	a0001c0002t0001g0243 a0001c0003t0001g0175 a0001c0002t0001g0243 a0001c0003t0001g0175	2	326	0.0061	28	c.46- others(43): Show c.46-8274_46-8273insATATATATATATTTTTTTTTTTTTTTTT	GPATCH8	ENSG00000186566.13	transcript	ENST00000591680.6	protein_coding	1/7			chr17	TogoVar
GPATCH8_chr17_44390281_44508406	44483176	A A	AAAAAAAA others(21): Show AAAAAAAAAAAAAATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02040.hp2 NA18982.hp1 HG02040.hp2 NA18982.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0105 a0001c0002t0001g0236 a0001c0001t0001g0105 a0001c0002t0001g0236	2	326	0.0061	28	c.46- others(43): Show c.46-8274_46-8273insATATATATATATATATTTTTTTTTTTTT	GPATCH8	ENSG00000186566.13	transcript	ENST00000591680.6	protein_coding	1/7			chr17	TogoVar
GPATCH8_chr17_44390281_44508406	44483176	A A	AAAAAAAA others(21): Show AAAAAAAAAAAATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG03942.hp1 NA18971.hp2 others(1): Show HG00423.hp2 HG03942.hp1 NA18971.hp2 NA19007.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0029 a0001c0001t0001g0114 a0001c0002t0001g0211 others(1): Show a0001c0001t0001g0029 a0001c0001t0001g0114 a0001c0002t0001g0211 a0001c0002t0001g0220	4	326	0.0123	28	c.46- others(43): Show c.46-8274_46-8273insATATATATATATATATATTTTTTTTTTT	GPATCH8	ENSG00000186566.13	transcript	ENST00000591680.6	protein_coding	1/7			chr17	TogoVar
GPC2_chr7_100164606_100182381	100172659	G G	GTATATAT others(21): Show GTATATATATATATGTGTGTGTGTGTGTA	intron_variant intron_variant	MODIFIER	HG02486.hp2 NA20129.hp2 HG02486.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0012 a0001c0001 a0001c0012	a0001c0001t0001 a0001c0012t0001 a0001c0001t0001 a0001c0012t0001	a0001c0001t0001g0052 a0001c0012t0001g0051 a0001c0001t0001g0052 a0001c0012t0001g0051	2	400	0.0050	28	c.893 others(43): Show c.893-470_893-443dupTACACACACACACACATATATATATATA	GPC2	ENSG00000213420.8	transcript	ENST00000292377.4	protein_coding	5/9			chr7	TogoVar
GPC2_chr7_100164606_100182381	100172685	G G	GTATATAT others(21): Show GTATATATATATATGTGTGTGTGTGTGTA	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01891.hp1 HG02257.hp1 others(15): Show HG01884.hp1 HG01891.hp1 HG02257.hp1 HG02486.hp1 HG02615.hp2 HG02630.hp2 HG02818.hp2 HG02886.hp2 HG02965.hp2 HG02970.hp2 HG02976.hp2 HG03139.hp1 HG03139.hp2 HG03486.hp1 HG03579.hp2 HG06807.hp2 NA18522.hp2 NA19240.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0002 a0001c0003t0001 a0001c0003t0002	a0001c0003t0001g0010 a0001c0003t0001g0013 a0001c0003t0001g0014 others(3): Show a0001c0003t0001g0010 a0001c0003t0001g0013 a0001c0003t0001g0014 a0001c0003t0001g0022 a0001c0003t0001g0030 a0001c0003t0002g0031	18	400	0.0450	28	c.893 others(43): Show c.893-469_893-468insTACACACACACACACATATATATATATA	GPC2	ENSG00000213420.8	transcript	ENST00000292377.4	protein_coding	5/9			chr7	TogoVar
GPC2_chr7_100164606_100182381	100172702	T T	TGTGTGTG others(21): Show TGTGTGTGTGTATATATATATATACATGC	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0032 a0001c0003t0001g0032	1	400	0.0025	28	c.893 others(43): Show c.893-486_893-485insGCATGTATATATATATATACACACACAC	GPC2	ENSG00000213420.8	transcript	ENST00000292377.4	protein_coding	5/9			chr7	TogoVar
GPC3_chrX_133530745_133990594	133855530	G G	GATATATA others(21): Show GATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19067.hp1 NA19067.hp1	a0003 a0003	a0003c0005 a0003c0005	a0003c0005t0001 a0003c0005t0001	a0003c0005t0001g0151 a0003c0005t0001g0151	1	152	0.0066	28	c.337 others(47): Show c.337+97519_337+97520insATATATATATATATATATATATATAT AT	GPC3	ENSG00000147257.16	transcript	ENST00000370818.8	protein_coding	2/7			chrX	TogoVar
GPC4_chrX_133295103_133420489	133404546	C C	CAAAAAAA others(21): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0008 a0001c0001t0005g0008	1	221	0.0045	28	c.160 others(47): Show c.160+10259_160+10260insTTTTTTTTTTTTTTTTTTTTTTTTTT TT	GPC4	ENSG00000076716.9	transcript	ENST00000370828.4	protein_coding	1/8			chrX	TogoVar
GPC4_chrX_133295103_133420489	133404866	A A	AAAAAAAA others(21): Show AAAAAAAAAAAAAAAAAAAAAAAAAAAAG	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0006 a0002c0002t0006	a0002c0002t0006g0011 a0002c0002t0006g0011	1	221	0.0045	28	c.160 others(45): Show c.160+9939_160+9940insCTTTTTTTTTTTTTTTTTTTTTTTTTTT	GPC4	ENSG00000076716.9	transcript	ENST00000370828.4	protein_coding	1/8			chrX	TogoVar
GPC5_chr13_91393621_92872237	91571769	G G	GTATATAC others(21): Show GTATATACACACACATATACGTGTGTGTA	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG06807.hp2 NA19043.hp1 HG03579.hp1 HG06807.hp2 NA19043.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 a0001c0001 a0002c0002 a0003c0003	a0001c0001t0002 a0002c0002t0002 a0003c0003t0001 a0001c0001t0002 a0002c0002t0002 a0003c0003t0001	a0001c0001t0002g0039 a0002c0002t0002g0015 a0003c0003t0001g0001 a0001c0001t0002g0039 a0002c0002t0002g0015 a0003c0003t0001g0001	3	42	0.0714	28	c.326 others(49): Show c.326-121401_326-121374dupTACGTGTGTGTATATATACACACA CATA	GPC5	ENSG00000179399.16	transcript	ENST00000377067.9	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC5_chr13_91393621_92872237	91572094	T T	TGTGTATA others(21): Show TGTGTATATACACACATATGTATATATAC	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0036 a0001c0001t0002g0036	1	42	0.0238	28	c.326 others(49): Show c.326-121089_326-121088insATATACACACATATGTATATATAC GTGT	GPC5	ENSG00000179399.16	transcript	ENST00000377067.9	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC5_chr13_91393621_92872237	91572192	C C	CACATATG others(21): Show CACATATGTATATATACGTGTATATATAT	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02280.hp2 HG02258.hp2 HG02280.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0004 a0001c0001t0001 a0002c0002t0004	a0001c0001t0001g0025 a0002c0002t0004g0026 a0001c0001t0001g0025 a0002c0002t0004g0026	2	42	0.0476	28	c.326 others(49): Show c.326-120992_326-120991insTATGTATATATACGTGTATATATA TACA	GPC5	ENSG00000179399.16	transcript	ENST00000377067.9	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC5_chr13_91393621_92872237	91572210	C C	CGTGTGTA others(21): Show CGTGTGTATATACACATATGTATATATAT	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01261.hp1 HG01891.hp1 others(10): Show HG01109.hp2 HG01261.hp1 HG01891.hp1 HG02615.hp2 HG02809.hp2 HG02896.hp2 HG02897.hp2 HG03041.hp1 HG03453.hp2 HG03486.hp1 HG03540.hp2 HG03579.hp2 NA19043.hp2	a0001 a0003 a0005 a0001 a0003 a0005	a0001c0001 a0001c0004 a0003c0003 others(1): Show a0001c0001 a0001c0004 a0003c0003 a0005c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0004t0001 a0003c0003t0002 a0005c0005t0002	a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0021 others(10): Show a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0021 a0001c0001t0001g0027 a0001c0001t0001g0031 a0001c0001t0002g0009 a0001c0001t0002g0014 a0001c0001t0002g0034 a0001c0001t0002g0037 a0001c0001t0003g0004 a0001c0004t0001g0024 a0003c0003t0002g0016 a0005c0005t0002g0035	13	42	0.3095	28	c.326 others(49): Show c.326-120973_326-120972insGTATATACACATATGTATATATAT GTGT	GPC5	ENSG00000179399.16	transcript	ENST00000377067.9	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC5_chr13_91393621_92872237	91674516	C C	CATATATG others(21): Show CATATATGCGTATGTGTATATATACGCAT	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02897.hp2 HG02896.hp2 HG02897.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0007 a0001c0001t0002g0037 a0001c0001t0001g0007 a0001c0001t0002g0037	2	42	0.0476	28	c.326 others(47): Show c.326-18568_326-18541dupATATACGCATATATATGCGTATGTGT AT	GPC5	ENSG00000179399.16	transcript	ENST00000377067.9	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC5_chr13_91393621_92872237	92031721	G G	GTAATATA others(21): Show GTAATATATTACATATTATATATAATATA	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG03540.hp2 HG02615.hp2 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0031 a0001c0001t0002g0034 a0001c0001t0001g0031 a0001c0001t0002g0034	2	42	0.0476	28	c.140 others(51): Show c.1402-113106_1402-113079dupATATATTACATATTATATATAA TATATA	GPC5	ENSG00000179399.16	transcript	ENST00000377067.9	protein_coding	6/7		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC5_chr13_91393621_92872237	92031749	A A	ATAATATA others(21): Show ATAATATATTACATATTATATATAATATG	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02809.hp2 HG02280.hp1 HG02809.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0027 a0001c0001t0001g0032 a0001c0001t0001g0027 a0001c0001t0001g0032	2	42	0.0476	28	c.140 others(51): Show c.1402-113079_1402-113078insATATATTACATATTATATATAA TATGTA	GPC5	ENSG00000179399.16	transcript	ENST00000377067.9	protein_coding	6/7		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC5_chr13_91393621_92872237	92031760	C C	TATATTAT others(21): Show TATATTATATATAATATATAATATATTAC	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG03041.hp1 HG02896.hp2 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0021 a0001c0001t0002g0037 a0001c0001t0001g0021 a0001c0001t0002g0037	2	42	0.0476	28	c.140 others(51): Show c.1402-113071_1402-113070insTATATTATATATAATATATAAT ATATTA	GPC5	ENSG00000179399.16	transcript	ENST00000377067.9	protein_coding	6/7			chr13	TogoVar
GPC5_chr13_91393621_92872237	92031805	A A	ATAATATA others(21): Show ATAATATATTACATATTATATATAATATG	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0022 a0001c0001t0001g0022	1	42	0.0238	28	c.140 others(51): Show c.1402-112998_1402-112997insGTAATATATTACATATTATATA TAATAT	GPC5	ENSG00000179399.16	transcript	ENST00000377067.9	protein_coding	6/7		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC5_chr13_91393621_92872237	92381897	A A	ATCATATA others(21): Show ATCATATATATGATATATATATATCATAT	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	42	0.0238	28	c.156 others(51): Show c.1561+236908_1561+236909insTCATATATATGATATATATATA TCATAT	GPC5	ENSG00000179399.16	transcript	ENST00000377067.9	protein_coding	7/7			chr13	TogoVar
GPC5_chr13_91393621_92872237	92381897	A A	ATCATATA others(21): Show ATCATATATATGATATATATATCATATAT	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02897.hp2 HG03579.hp2 others(1): Show HG02280.hp2 HG02897.hp2 HG03579.hp2 NA19043.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 a0001c0001 a0002c0002 a0003c0003	a0001c0001t0001 a0001c0001t0002 a0002c0002t0004 others(1): Show a0001c0001t0001 a0001c0001t0002 a0002c0002t0004 a0003c0003t0002	a0001c0001t0001g0007 a0001c0001t0002g0014 a0002c0002t0004g0026 others(1): Show a0001c0001t0001g0007 a0001c0001t0002g0014 a0002c0002t0004g0026 a0003c0003t0002g0016	4	42	0.0952	28	c.156 others(51): Show c.1561+236908_1561+236909insTCATATATATGATATATATATC ATATAT	GPC5	ENSG00000179399.16	transcript	ENST00000377067.9	protein_coding	7/7			chr13	TogoVar
GPC5_chr13_91393621_92872237	92421698	C C	CAAAAAAA others(21): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0006	1	42	0.0238	28	c.156 others(51): Show c.1561+276731_1561+276732insAAAAAAAAAAAAAAAAAAAAAA AAAAAA	GPC5	ENSG00000179399.16	transcript	ENST00000377067.9	protein_coding	7/7		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC5_chr13_91393621_92872237	92692759	T T	TTTTTTTT others(21): Show TTTTTTTTTTTTTTTTTTTTTTTTTTTTG	intron_variant intron_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0039 a0001c0001t0002g0039	1	42	0.0238	28	c.156 others(51): Show c.1562-173506_1562-173505insTTTTTTTTTTGTTTTTTTTTTT TTTTTT	GPC5	ENSG00000179399.16	transcript	ENST00000377067.9	protein_coding	7/7		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC6_chr13_93221807_94413020	93368358	T T	TTCCTTCC others(21): Show TTCCTTCCTTCCTTCCTTCCTTCCTTCCG	intron_variant intron_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0035 a0001c0001t0016g0035	1	76	0.0132	28	c.160 others(49): Show c.160+140769_160+140770insGTCCTTCCTTCCTTCCTTCCTTCC TTCC	GPC6	ENSG00000183098.12	transcript	ENST00000377047.9	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC6_chr13_93221807_94413020	93561404	G G	GAGATATA others(21): Show GAGATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0033 a0001c0001t0004g0033	1	76	0.0132	28	c.319 others(47): Show c.319+15984_319+15985insGATATATATATATATATATATATATA TA	GPC6	ENSG00000183098.12	transcript	ENST00000377047.9	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC6_chr13_93221807_94413020	93561404	G G	GATATATA others(21): Show GATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02818.hp2 NA19240.hp2 HG02647.hp1 HG02818.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0005 a0001c0001t0031 a0001c0001t0004 a0001c0001t0005 a0001c0001t0031	a0001c0001t0004g0067 a0001c0001t0005g0050 a0001c0001t0031g0031 a0001c0001t0004g0067 a0001c0001t0005g0050 a0001c0001t0031g0031	3	76	0.0395	28	c.319 others(47): Show c.319+16005_319+16006insATATATATATATATATATATATATAT AT	GPC6	ENSG00000183098.12	transcript	ENST00000377047.9	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC6_chr13_93221807_94413020	93789606	T T	TATAATAC others(21): Show TATAATACTACATATATATATAATACTAC	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02451.hp2 HG02970.hp2 others(2): Show HG01884.hp1 HG02451.hp2 HG02970.hp2 HG03017.hp2 HG03579.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0003 a0003c0004 a0001c0001 a0001c0003 a0003c0004	a0001c0001t0003 a0001c0001t0016 a0001c0001t0034 others(2): Show a0001c0001t0003 a0001c0001t0016 a0001c0001t0034 a0001c0003t0014 a0003c0004t0003	a0001c0001t0003g0065 a0001c0001t0016g0018 a0001c0001t0034g0076 others(2): Show a0001c0001t0003g0065 a0001c0001t0016g0018 a0001c0001t0034g0076 a0001c0003t0014g0021 a0003c0004t0003g0058	5	76	0.0658	28	c.320 others(47): Show c.320-40545_320-40544insATACTACATATATATATAATACTACA TA	GPC6	ENSG00000183098.12	transcript	ENST00000377047.9	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC6_chr13_93221807_94413020	94150814	G G	GTATATAT others(21): Show GTATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG04228.hp1 HG02647.hp2 HG04228.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0015 a0001c0001t0006 a0001c0001t0015	a0001c0001t0006g0068 a0001c0001t0015g0036 a0001c0001t0006g0068 a0001c0001t0015g0036	2	76	0.0263	28	c.877 others(49): Show c.877+122937_877+122938insATATATATATATATATATATATAT ATAT	GPC6	ENSG00000183098.12	transcript	ENST00000377047.9	protein_coding	4/8		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC6_chr13_93221807_94413020	94225668	C C	CATATATA others(21): Show CATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0014 a0001c0003t0014	a0001c0003t0014g0021 a0001c0003t0014g0021	1	76	0.0132	28	c.878 others(47): Show c.878-60680_878-60679insTATATATATATATATATATATATATA TA	GPC6	ENSG00000183098.12	transcript	ENST00000377047.9	protein_coding	4/8		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPD1L_chr3_32101620_32173709	32121714	C C	CATATATT others(21): Show CATATATTTCTATATATATATTTCTATAT	intron_variant intron_variant	MODIFIER	NA20300.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0139 a0001c0001t0002g0139	1	360	0.0028	28	c.48- others(43): Show c.48-6341_48-6314dupTTCTATATATATATTTCTATATATATAT	GPD1L	ENSG00000152642.11	transcript	ENST00000282541.10	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
GPER1_chr7_1083113_1098810	1095330	G G	GCAGCAGC others(21): Show GCAGCAGCCCCCAAACCCCCCTCCCCCGA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19062.hp1 NA19062.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0019 a0001c0001t0003g0019	1	446	0.0022	28	c.24 others(39): Show c.2474_*2475insCAGCAGCCCCCAAACCCCCCTCCCCCGA	GPER1	ENSG00000164850.16	transcript	ENST00000397088.4	protein_coding		1521		chr7	TogoVar
GPHN_chr14_66503147_67186803	66683415	T T	TATATATA others(21): Show TATATATATGTTCATATATATATATGTTC	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01167.hp1 HG02055.hp1 HG00735.hp2 HG01167.hp1 HG02055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0135 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0135	3	234	0.0128	28	c.143 others(45): Show c.143+2238_143+2239insGTTCATATATATATATGTTCATATATAT	GPHN	ENSG00000171723.16	transcript	ENST00000478722.6	protein_coding	2/22		INFO_REALIGN_3_PRIME	chr14	TogoVar
GPHN_chr14_66503147_67186803	67036501	G G	GCACACAC others(21): Show GCACACACACACACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG02027.hp1 HG02809.hp2 HG03486.hp2 HG02027.hp1 HG02809.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0099 a0001c0001t0001g0143 a0001c0001t0001g0207 a0001c0001t0001g0099 a0001c0001t0001g0143 a0001c0001t0001g0207	3	234	0.0128	28	c.100 others(49): Show c.1006+12839_1006+12866dupCACACACACACACACACACACACA CACA	GPHN	ENSG00000171723.16	transcript	ENST00000478722.6	protein_coding	10/22		INFO_REALIGN_3_PRIME	chr14	TogoVar
GPHN_chr14_66503147_67186803	67070715	A A	AAAAAAAA others(21): Show AAAAAAAAAAAATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0125 a0001c0001t0001g0125	1	234	0.0043	28	c.114 others(49): Show c.1144+11930_1144+11931insAAAAAAAAAATATATATATATATA TATA	GPHN	ENSG00000171723.16	transcript	ENST00000478722.6	protein_coding	11/22		INFO_REALIGN_3_PRIME	chr14	TogoVar
GPHN_chr14_66503147_67186803	67070715	A A	AAAAAAAA others(21): Show AAAAAAAAAATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19082.hp1 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0216 a0001c0001t0001g0216	1	234	0.0043	28	c.114 others(49): Show c.1144+11930_1144+11931insAAAAAAAATATATATATATATATA TATA	GPHN	ENSG00000171723.16	transcript	ENST00000478722.6	protein_coding	11/22		INFO_REALIGN_3_PRIME	chr14	TogoVar
GPHN_chr14_66503147_67186803	67070715	A A	AAAAAAAA others(21): Show AAAAAAAATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02015.hp2 NA19000.hp1 HG02015.hp2 NA19000.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0210 a0001c0001t0001g0219 a0001c0001t0001g0210 a0001c0001t0001g0219	2	234	0.0086	28	c.114 others(49): Show c.1144+11930_1144+11931insAAAAAATATATATATATATATATA TATA	GPHN	ENSG00000171723.16	transcript	ENST00000478722.6	protein_coding	11/22		INFO_REALIGN_3_PRIME	chr14	TogoVar
GPHN_chr14_66503147_67186803	67144286	T T	TACACATA others(21): Show TACACATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	NA18945.hp1 NA18945.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0193 a0001c0001t0001g0193	1	234	0.0043	28	c.183 others(45): Show c.1836+842_1836+843insTATATATATATATATATATATACACACA	GPHN	ENSG00000171723.16	transcript	ENST00000478722.6	protein_coding	18/22		INFO_REALIGN_3_PRIME	chr14	TogoVar
GPHN_chr14_66503147_67186803	67144286	T T	TATACATA others(21): Show TATACATATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	NA19070.hp1 NA19070.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0204 a0001c0001t0001g0204	1	234	0.0043	28	c.183 others(45): Show c.1836+838_1836+839insTACATATATATATATATATATATACACA	GPHN	ENSG00000171723.16	transcript	ENST00000478722.6	protein_coding	18/22		INFO_REALIGN_3_PRIME	chr14	TogoVar
GPHN_chr14_66503147_67186803	67144286	T T	TATACATA others(21): Show TATACATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0163 a0001c0001t0001g0163	1	234	0.0043	28	c.183 others(45): Show c.1836+838_1836+839insTACATATATATATATATATATATATACA	GPHN	ENSG00000171723.16	transcript	ENST00000478722.6	protein_coding	18/22		INFO_REALIGN_3_PRIME	chr14	TogoVar
GPKOW_chrX_49108407_49128735	49122040	G G	GCACCCCC others(21): Show GCACCCCCATCTCCTTTCTGACTTCGTCT	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0112 a0001c0001t0001g0112	1	276	0.0036	28	c.456 others(43): Show c.456+330_456+357dupAGACGAAGTCAGAAAGGAGATGGGGGTG	GPKOW	ENSG00000068394.11	transcript	ENST00000156109.7	protein_coding	3/10			chrX	TogoVar

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