Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
GRK5_chr10_119202571_119464745	119344872	C C	CCCTTCCT others(21): Show CCCTTCCTTCCTTCCTTCCTTCCTTCCTT	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01081.hp1	a0003 a0003	a0003c0002 a0003c0002	a0003c0002t0058 a0003c0002t0058	a0003c0002t0058g0191 a0003c0002t0058g0191	1	202	0.0050	28	c.148 others(47): Show c.148+18298_148+18325dupCCTTCCTTCCTTCCTTCCTTCCTTCC TT	GRK5	ENSG00000198873.12	transcript	ENST00000392870.3	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr10	TogoVar
GRK5_chr10_119202571_119464745	119394738	T T	TGTGGGTG others(21): Show TGTGGGTGTATCTGCGTGTCTGTGGGCAC	intron_variant intron_variant	MODIFIER	HG03834.hp1 HG04115.hp2 HG03834.hp1 HG04115.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0002 a0001c0001 a0003c0002	a0001c0001t0002 a0003c0002t0060 a0001c0001t0002 a0003c0002t0060	a0001c0001t0002g0008 a0003c0002t0060g0173 a0001c0001t0002g0008 a0003c0002t0060g0173	2	202	0.0099	28	c.262 others(45): Show c.262-1954_262-1953insGGTGTATCTGCGTGTCTGTGGGCACGTG	GRK5	ENSG00000198873.12	transcript	ENST00000392870.3	protein_coding	3/15		INFO_REALIGN_3_PRIME	chr10	TogoVar
GRM1_chr6_146024062_146442601	146043782	G G	GATATATA others(21): Show GATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01517.hp1 HG01109.hp1 HG01517.hp1	a0001 a0002 a0001 a0002	a0001c0003 a0002c0002 a0001c0003 a0002c0002	a0001c0003t0002 a0002c0002t0004 a0001c0003t0002 a0002c0002t0004	a0001c0003t0002g0127 a0002c0002t0004g0123 a0001c0003t0002g0127 a0002c0002t0004g0123	2	158	0.0127	28	c.700 others(47): Show c.700+13567_700+13594dupTATATATATATATATATATATATATA TA	GRM1	ENSG00000152822.15	transcript	ENST00000282753.6	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr6	TogoVar
GRM1_chr6_146024062_146442601	146159641	T T	TCTCTCTC others(21): Show TCTCTCTCTCTCTCTCTCTCTCACACACA	intron_variant intron_variant	MODIFIER	NA18944.hp1 NA18944.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0073 a0001c0001t0001g0073	1	158	0.0063	28	c.950 others(41): Show c.950+45_950+46insTCTCTCTCTCTCTCTCTCTCACACACAC	GRM1	ENSG00000152822.15	transcript	ENST00000282753.6	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr6	TogoVar
GRM1_chr6_146024062_146442601	146219689	A A	ATTGGGTA others(21): Show ATTGGGTAAATATATTGGGTAAATATATG	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02257.hp2 HG03225.hp1 HG01891.hp2 HG02257.hp2 HG03225.hp1	a0001 a0001	a0001c0004 a0001c0006 a0001c0004 a0001c0006	a0001c0004t0006 a0001c0006t0001 a0001c0004t0006 a0001c0006t0001	a0001c0004t0006g0019 a0001c0004t0006g0020 a0001c0006t0001g0055 a0001c0004t0006g0019 a0001c0004t0006g0020 a0001c0006t0001g0055	3	158	0.0190	28	c.950 others(47): Show c.950+60093_950+60094insTGGGTAAATATATTGGGTAAATATAT GT	GRM1	ENSG00000152822.15	transcript	ENST00000282753.6	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr6	TogoVar
GRM3_chr7_86638909_86869879	86746341	T T	TTTTATAT others(21): Show TTTTATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03239.hp1 HG03239.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0200 a0001c0002t0001g0200	1	216	0.0046	28	c.-14 others(49): Show c.-140-18664_-140-18663insTTATATATATATATATATATATAT ATAT	GRM3	ENSG00000198822.11	transcript	ENST00000361669.7	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr7	TogoVar
GRM5_chr11_88499642_89070982	88524190	T T	TTTTCTTT others(21): Show TTTTCTTTCTTTCTTTCTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	NA18981.hp2 NA18984.hp1 NA18981.hp2 NA18984.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0043 a0001c0001t0003g0044 a0001c0001t0003g0043 a0001c0001t0003g0044	2	184	0.0109	28	c.272 others(47): Show c.2726+1118_2726+1119insGAAAGAAAGAAAGAAAGAAAGAAAGA AA	GRM5	ENSG00000168959.15	transcript	ENST00000305447.5	protein_coding	9/9			chr11	TogoVar
GRM5_chr11_88499642_89070982	88570571	A A	ATATATAT others(21): Show ATATATATATATATATATATTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0021 a0001c0001t0021	a0001c0001t0021g0024 a0001c0001t0021g0024	1	184	0.0054	28	c.169 others(47): Show c.1691-2580_1691-2579insAAAAAAAAAATATATATATATATATA TA	GRM5	ENSG00000168959.15	transcript	ENST00000305447.5	protein_coding	7/9			chr11	TogoVar
GRM5_chr11_88499642_89070982	88838084	C C	CAAAAAAA others(21): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02015.hp2 HG02015.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0101 a0001c0001t0001g0101	1	184	0.0054	28	c.911 others(47): Show c.911+11821_911+11822insTTTTTTTTTTTTTTTTTTTTTTTTTT TT	GRM5	ENSG00000168959.15	transcript	ENST00000305447.5	protein_coding	3/9			chr11	TogoVar
GRM5_chr11_88499642_89070982	88854058	G G	GTATATAT others(21): Show GTATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01256.hp1 HG01978.hp2 NA18993.hp2 others(1): Show HG01256.hp1 HG01978.hp2 NA18993.hp2 NA19070.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005	a0001c0001t0002g0073 a0001c0001t0003g0059 a0001c0001t0003g0155 others(1): Show a0001c0001t0002g0073 a0001c0001t0003g0059 a0001c0001t0003g0155 a0001c0001t0005g0078	4	184	0.0217	28	c.662 others(45): Show c.662-3904_662-3903insTATATATATATATATATATATATATATA	GRM5	ENSG00000168959.15	transcript	ENST00000305447.5	protein_coding	2/9			chr11	TogoVar
GRM5_chr11_88499642_89070982	88919238	C C	CTATATAT others(21): Show CTATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG02109.hp1 HG02647.hp2 others(6): Show HG01358.hp2 HG02109.hp1 HG02647.hp2 HG02970.hp2 HG03209.hp2 HG03490.hp2 HG06807.hp1 NA18966.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0014 a0001c0001 a0001c0014	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0021 a0001c0001t0039 a0001c0014t0002	a0001c0001t0001g0141 a0001c0001t0001g0154 a0001c0001t0002g0153 others(6): Show a0001c0001t0001g0141 a0001c0001t0001g0154 a0001c0001t0002g0153 a0001c0001t0003g0009 a0001c0001t0003g0049 a0001c0001t0004g0079 a0001c0001t0021g0024 a0001c0001t0039g0184 a0001c0014t0002g0167	9	184	0.0489	28	c.662 others(47): Show c.662-69084_662-69083insTATATATATATATATATATATATATA TA	GRM5	ENSG00000168959.15	transcript	ENST00000305447.5	protein_coding	2/9			chr11	TogoVar
GRM5_chr11_88499642_89070982	89064888	C C	CTCTCTCT others(21): Show CTCTCTCTCTCTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0008 a0001c0001t0004g0008	1	184	0.0054	28	c.-20 others(45): Show c.-201+887_-201+888insCACACACACACACACACAGAGAGAGAGA	GRM5	ENSG00000168959.15	transcript	ENST00000305447.5	protein_coding	1/9			chr11	TogoVar
GRM5_chr11_88499642_89070982	89064888	C C	CTCTCTCT others(21): Show CTCTCTCTCTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0007 a0001c0002t0007	a0001c0002t0007g0019 a0001c0002t0007g0019	1	184	0.0054	28	c.-20 others(45): Show c.-201+887_-201+888insCACACACACACACACACACAGAGAGAGA	GRM5	ENSG00000168959.15	transcript	ENST00000305447.5	protein_coding	1/9			chr11	TogoVar
GRM7_chr3_6856115_7746533	6869581	G G	GTCTATCT others(21): Show GTCTATCTATCTATCTATCTATCTATCTA	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00738.hp1 HG02280.hp2 others(2): Show HG00140.hp2 HG00738.hp1 HG02280.hp2 HG06807.hp2 NA18522.hp1	a0001 a0001	a0001c0002 a0001c0004 a0001c0005 others(1): Show a0001c0002 a0001c0004 a0001c0005 a0001c0018	a0001c0002t0001 a0001c0002t0003 a0001c0004t0004 others(2): Show a0001c0002t0001 a0001c0002t0003 a0001c0004t0004 a0001c0005t0003 a0001c0018t0001	a0001c0002t0001g0031 a0001c0002t0003g0017 a0001c0004t0004g0008 others(2): Show a0001c0002t0001g0031 a0001c0002t0003g0017 a0001c0004t0004g0008 a0001c0005t0003g0039 a0001c0018t0001g0040	5	80	0.0625	28	c.519 others(45): Show c.519+7695_519+7696insCTATCTATCTATCTATCTATCTATCTAT	GRM7	ENSG00000196277.17	transcript	ENST00000357716.9	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRM7_chr3_6856115_7746533	7064479	T T	TATATATA others(21): Show TATATATATGTATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0003 a0001c0004t0003	a0001c0004t0003g0079 a0001c0004t0003g0079	1	80	0.0125	28	c.520 others(47): Show c.520-81972_520-81971insTATATATGTATATATATATATATATA CA	GRM7	ENSG00000196277.17	transcript	ENST00000357716.9	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRM7_chr3_6856115_7746533	7064505	C C	CACATATA others(21): Show CACATATACATATATATATATACACATAT	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02280.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0017 a0001c0002t0003g0017	1	80	0.0125	28	c.520 others(47): Show c.520-81946_520-81945insCATATACATATATATATATACACATA TA	GRM7	ENSG00000196277.17	transcript	ENST00000357716.9	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRM7_chr3_6856115_7746533	7252684	T T	TTCTTTTC others(21): Show TTCTTTTCTTTTTTTCTTTTCTTTTTTTC	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00738.hp1 others(43): Show HG00140.hp1 HG00140.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01106.hp1 HG01106.hp2 HG01258.hp1 HG01358.hp2 HG01433.hp1 HG01433.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02145.hp1 HG02280.hp1 HG02622.hp1 HG02622.hp2 HG02717.hp2 HG02896.hp2 HG02922.hp1 HG02965.hp1 HG02965.hp2 HG02976.hp2 HG03098.hp1 HG03098.hp2 HG03195.hp1 HG03209.hp2 HG03579.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG04115.hp1 HG04115.hp2 HG04199.hp1 HG04199.hp2 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18974.hp1 NA18974.hp2 NA20129.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(10): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0008 a0001c0009 a0001c0013 a0001c0017 a0001c0018 a0002c0006 a0002c0007 a0002c0019	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(25): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0007 a0001c0003t0001 a0001c0003t0002 a0001c0003t0005 a0001c0004t0001 a0001c0004t0002 a0001c0004t0003 a0001c0004t0004 a0001c0005t0001 a0001c0005t0003 a0001c0005t0008 a0001c0008t0003 a0001c0009t0001 a0001c0013t0001 a0001c0017t0001 a0001c0018t0001 a0002c0006t0001 a0002c0006t0007 a0002c0007t0001 a0002c0007t0003 a0002c0019t0003	a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0021 others(43): Show a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0021 a0001c0001t0001g0033 a0001c0001t0001g0038 a0001c0001t0002g0025 a0001c0001t0002g0064 a0001c0001t0003g0006 a0001c0001t0003g0063 a0001c0001t0005g0055 a0001c0001t0005g0072 a0001c0002t0001g0004 a0001c0002t0001g0059 a0001c0002t0001g0080 a0001c0002t0002g0024 a0001c0002t0002g0042 a0001c0002t0003g0060 a0001c0002t0007g0057 a0001c0003t0001g0018 a0001c0003t0001g0032 a0001c0003t0001g0052 a0001c0003t0001g0053 a0001c0003t0001g0065 a0001c0003t0001g0068 a0001c0003t0002g0044 a0001c0003t0005g0015 a0001c0004t0001g0071 a0001c0004t0002g0013 a0001c0004t0003g0058 a0001c0004t0004g0008 a0001c0005t0001g0034 a0001c0005t0001g0074 a0001c0005t0003g0039 a0001c0005t0008g0028 a0001c0008t0003g0016 a0001c0009t0001g0049 a0001c0009t0001g0069 a0001c0013t0001g0048 a0001c0017t0001g0041 a0001c0018t0001g0040 a0002c0006t0001g0002 a0002c0006t0001g0007 a0002c0006t0007g0027 a0002c0007t0001g0050 a0002c0007t0003g0075 a0002c0019t0003g0036	46	80	0.5750	28	c.737 others(47): Show c.737-45999_737-45998insCTTTTCTTTTTTTCTTTTCTTTTTTT CT	GRM7	ENSG00000196277.17	transcript	ENST00000357716.9	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRM7_chr3_6856115_7746533	7661794	C C	CAAAAAAA others(21): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01358.hp1 HG01981.hp1 HG02145.hp1 HG01358.hp1 HG01981.hp1 HG02145.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0009 a0002c0006 a0001c0001 a0001c0009 a0002c0006	a0001c0001t0001 a0001c0009t0001 a0002c0006t0001 a0001c0001t0001 a0001c0009t0001 a0002c0006t0001	a0001c0001t0001g0005 a0001c0009t0001g0049 a0002c0006t0001g0007 a0001c0001t0001g0005 a0001c0009t0001g0049 a0002c0006t0001g0007	3	80	0.0375	28	c.245 others(49): Show c.2452-18229_2452-18228insAAAAAAAAAAAAAAAAAAAAAAAA AAAA	GRM7	ENSG00000196277.17	transcript	ENST00000357716.9	protein_coding	8/9		INFO_REALIGN_3_PRIME	chr3	TogoVar
GRM8_chr7_126433598_127257941	126646262	A A	AGAAGGAA others(21): Show AGAAGGAAGGAAGGAAGGAAGGAAGGAAG	intron_variant intron_variant	MODIFIER	HG01993.hp2 HG02723.hp2 HG03834.hp1 others(1): Show HG01993.hp2 HG02723.hp2 HG03834.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0041 a0001c0001t0001g0071 a0001c0001t0001g0077 others(1): Show a0001c0001t0001g0041 a0001c0001t0001g0071 a0001c0001t0001g0077 a0001c0001t0002g0103	4	108	0.0370	28	c.135 others(49): Show c.1358-36792_1358-36765dupCTTCCTTCCTTCCTTCCTTCCTTC CTTC	GRM8	ENSG00000179603.19	transcript	ENST00000339582.7	protein_coding	7/10			chr7	TogoVar
GRM8_chr7_126433598_127257941	126788420	A A	AAAAAAAA others(21): Show AAAAAAAAAAAAAAAAAAAAACAAAAAAC	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG03225.hp2 HG02970.hp2 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0018 a0001c0001t0001g0082 a0001c0001t0001g0018 a0001c0001t0001g0082	2	108	0.0185	28	c.115 others(49): Show c.1157-18356_1157-18355insGTTTTTTGTTTTTTTTTTTTTTTT TTTT	GRM8	ENSG00000179603.19	transcript	ENST00000339582.7	protein_coding	6/10			chr7	TogoVar
GRM8_chr7_126433598_127257941	126788420	A A	AAAAAAAA others(21): Show AAAAAAAAAAAAAACAAAAAACAAAAAAC	intron_variant intron_variant	MODIFIER	HG01978.hp1 HG01978.hp2 HG02559.hp2 others(6): Show HG01978.hp1 HG01978.hp2 HG02559.hp2 HG02698.hp2 HG02809.hp2 HG02922.hp2 HG03041.hp1 HG03453.hp2 HG03491.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0005 a0003c0003 a0001c0001 a0001c0005 a0003c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0001c0005t0001 a0003c0003t0001	a0001c0001t0001g0105 a0001c0001t0002g0019 a0001c0001t0002g0028 others(6): Show a0001c0001t0001g0105 a0001c0001t0002g0019 a0001c0001t0002g0028 a0001c0001t0003g0001 a0001c0001t0008g0108 a0001c0005t0001g0063 a0003c0003t0001g0044 a0003c0003t0001g0054 a0003c0003t0001g0100	9	108	0.0833	28	c.115 others(49): Show c.1157-18356_1157-18355insGTTTTTTGTTTTTTGTTTTTTTTT TTTT	GRM8	ENSG00000179603.19	transcript	ENST00000339582.7	protein_coding	6/10			chr7	TogoVar
GRM8_chr7_126433598_127257941	126788420	A A	AAAAAAAA others(21): Show AAAAAAAACAAAAACAAAAAACAAAAAAC	intron_variant intron_variant	MODIFIER	HG01943.hp1 HG02630.hp1 HG01943.hp1 HG02630.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0092 a0001c0001t0002g0052 a0001c0001t0001g0092 a0001c0001t0002g0052	2	108	0.0185	28	c.115 others(49): Show c.1157-18356_1157-18355insGTTTTTTGTTTTTTGTTTTTGTTT TTTT	GRM8	ENSG00000179603.19	transcript	ENST00000339582.7	protein_coding	6/10			chr7	TogoVar
GRM8_chr7_126433598_127257941	126788420	A A	AAAAAAAC others(21): Show AAAAAAACAAAAAACAAAAAACAAAAAAC	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0004 a0001c0004t0004	a0001c0004t0004g0005 a0001c0004t0004g0005	1	108	0.0093	28	c.115 others(49): Show c.1157-18356_1157-18355insGTTTTTTGTTTTTTGTTTTTTGTT TTTT	GRM8	ENSG00000179603.19	transcript	ENST00000339582.7	protein_coding	6/10			chr7	TogoVar
GRM8_chr7_126433598_127257941	126788420	A A	AACAAAAA others(21): Show AACAAAAAAAAAAACAAAAAAAAAAAAAC	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02976.hp2 HG03195.hp2 others(1): Show HG02572.hp1 HG02976.hp2 HG03195.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0017 a0001c0001t0001g0053 a0001c0001t0001g0055 others(1): Show a0001c0001t0001g0017 a0001c0001t0001g0053 a0001c0001t0001g0055 a0001c0001t0001g0056	4	108	0.0370	28	c.115 others(49): Show c.1157-18356_1157-18355insGTTTTTTTTTTTTTGTTTTTTTTT TTGT	GRM8	ENSG00000179603.19	transcript	ENST00000339582.7	protein_coding	6/10			chr7	TogoVar
GRN_chr17_44340302_44358106	44357730	C C	CGTGTGTG others(21): Show CGTGTGTGTGTGTGTGTGTGTGTGTGTGT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00738.hp1 NA19004.hp1 NA19077.hp1 HG00738.hp1 NA19004.hp1 NA19077.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0002 a0001c0001t0002g0003	3	452	0.0066	28	c.49 others(39): Show c.4932_*4933insGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GRN	ENSG00000030582.19	transcript	ENST00000053867.8	protein_coding		4625		chr17	TogoVar
GRP_chr18_59215158_59235771	59226517	A A	ATTTTCTC others(21): Show ATTTTCTCGGCTTATGCTCACAGAAGTCT	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01070.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0121 a0001c0001t0001g0121	1	408	0.0025	28	c.382 others(43): Show c.382+785_382+812dupTTTCTCGGCTTATGCTCACAGAAGTCTT	GRP	ENSG00000134443.10	transcript	ENST00000256857.7	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr18	TogoVar
GRP_chr18_59215158_59235771	59227012	T T	TCTTTCTT others(21): Show TCTTTCTTTCTTTCTTTCTTTCTTTCTTC	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0102 a0001c0001t0001g0102	1	408	0.0025	28	c.382 others(45): Show c.382+1305_382+1306insCCTTTCTTTCTTTCTTTCTTTCTTTCTT	GRP	ENSG00000134443.10	transcript	ENST00000256857.7	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr18	TogoVar
GRP_chr18_59215158_59235771	59227016	T T	TCTTTCTT others(21): Show TCTTTCTTTCTTTCTTTCTTTCTTCCTTC	intron_variant intron_variant	MODIFIER	NA18939.hp2 NA18942.hp1 NA18957.hp2 others(4): Show NA18939.hp2 NA18942.hp1 NA18957.hp2 NA18974.hp2 NA19002.hp2 NA19067.hp1 NA19077.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0019 a0001c0001t0001g0054 a0001c0001t0001g0060 a0001c0001t0001g0019 a0001c0001t0001g0054 a0001c0001t0001g0060	7	408	0.0172	28	c.382 others(45): Show c.382+1305_382+1306insCCTTCCTTTCTTTCTTTCTTTCTTTCTT	GRP	ENSG00000134443.10	transcript	ENST00000256857.7	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr18	TogoVar
GRP_chr18_59215158_59235771	59227016	T T	TCTTTCTT others(21): Show TCTTTCTTTCTTTCTTTCTTTCTTTCTTC	intron_variant intron_variant	MODIFIER	HG01071.hp1 HG01071.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0103 a0001c0001t0001g0103	1	408	0.0025	28	c.382 others(45): Show c.382+1309_382+1310insCCTTTCTTTCTTTCTTTCTTTCTTTCTT	GRP	ENSG00000134443.10	transcript	ENST00000256857.7	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr18	TogoVar
GRP_chr18_59215158_59235771	59227020	T T	TCTTTCTT others(21): Show TCTTTCTTTCTTTCTTTCTTTCTTCCTTC	intron_variant intron_variant	MODIFIER	HG03491.hp1 HG03492.hp1 NA18990.hp1 others(1): Show HG03491.hp1 HG03492.hp1 NA18990.hp1 NA18990.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0020 a0001c0001t0001g0020	4	408	0.0098	28	c.382 others(45): Show c.382+1309_382+1310insCCTTCCTTTCTTTCTTTCTTTCTTTCTT	GRP	ENSG00000134443.10	transcript	ENST00000256857.7	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr18	TogoVar
GRP_chr18_59215158_59235771	59227024	T T	TCTTTCTT others(21): Show TCTTTCTTTCTTTCTTTCTTTCTTCCTTC	intron_variant intron_variant	MODIFIER	HG00673.hp2 NA19007.hp2 NA19056.hp1 HG00673.hp2 NA19007.hp2 NA19056.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0027 a0001c0001t0001g0027	3	408	0.0074	28	c.382 others(45): Show c.382+1313_382+1314insCCTTCCTTTCTTTCTTTCTTTCTTTCTT	GRP	ENSG00000134443.10	transcript	ENST00000256857.7	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr18	TogoVar
GRTP1_chr13_113319163_113369130	113346233	C C	CCCAGGAG others(21): Show CCCAGGAGCACCTCTGTGGCTGAGCGGAT	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG01106.hp2 HG03704.hp1 others(3): Show HG00423.hp1 HG01106.hp2 HG03704.hp1 HG03704.hp2 NA18977.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0046 a0001c0001t0001g0051 a0001c0001t0001g0134 others(3): Show a0001c0001t0001g0046 a0001c0001t0001g0051 a0001c0001t0001g0134 a0001c0001t0001g0259 a0001c0001t0001g0263 a0001c0001t0002g0117	6	288	0.0208	28	c.466 others(45): Show c.466-1275_466-1274insATCCGCTCAGCCACAGAGGTGCTCCTGG	GRTP1	ENSG00000139835.14	transcript	ENST00000375431.9	protein_coding	4/7			chr13	TogoVar
GRTP1_chr13_113319163_113369130	113346354	A A	AGGAGCAC others(21): Show AGGAGCACCTCTGTGGCTGAGCGGATCCG	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG03579.hp1 HG02922.hp1 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0156 a0001c0001t0001g0165 a0001c0001t0001g0156 a0001c0001t0001g0165	2	288	0.0069	28	c.466 others(45): Show c.466-1396_466-1395insCGGATCCGCTCAGCCACAGAGGTGCTCC	GRTP1	ENSG00000139835.14	transcript	ENST00000375431.9	protein_coding	4/7			chr13	TogoVar
GRTP1_chr13_113319163_113369130	113346442	A A	AGGAGCAC others(21): Show AGGAGCACCTCTGTGGCTGAGCGGATCCG	intron_variant intron_variant	MODIFIER	NA19007.hp2 NA19007.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0226 a0001c0001t0001g0226	1	288	0.0035	28	c.466 others(45): Show c.466-1484_466-1483insCGGATCCGCTCAGCCACAGAGGTGCTCC	GRTP1	ENSG00000139835.14	transcript	ENST00000375431.9	protein_coding	4/7			chr13	TogoVar
GRTP1_chr13_113319163_113369130	113346442	A A	AGGAGGAC others(21): Show AGGAGGACCTCTGTGGCTGAGCGGATCTG	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01243.hp1 NA19240.hp2 HG01109.hp1 HG01243.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0167 a0001c0001t0004g0172 a0001c0001t0004g0174 a0001c0001t0004g0167 a0001c0001t0004g0172 a0001c0001t0004g0174	3	288	0.0104	28	c.466 others(45): Show c.466-1484_466-1483insCAGATCCGCTCAGCCACAGAGGTCCTCC	GRTP1	ENSG00000139835.14	transcript	ENST00000375431.9	protein_coding	4/7			chr13	TogoVar
GRTP1_chr13_113319163_113369130	113346521	A A	ACAGTGGA others(21): Show ACAGTGGACCCGAGAGGACCTCTGCGGCT	intron_variant intron_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0264 a0001c0001t0001g0264	1	288	0.0035	28	c.466 others(45): Show c.466-1563_466-1562insAGCCGCAGAGGTCCTCTCGGGTCCACTG	GRTP1	ENSG00000139835.14	transcript	ENST00000375431.9	protein_coding	4/7			chr13	TogoVar
GRTP1_chr13_113319163_113369130	113346562	A A	AGGAGCAC others(21): Show AGGAGCACCTCTGTGGCTGAGCGGATCCG	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG03098.hp1 HG00140.hp1 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0081 a0001c0001t0003g0039 a0001c0001t0001g0081 a0001c0001t0003g0039	2	288	0.0069	28	c.466 others(45): Show c.466-1604_466-1603insCGGATCCGCTCAGCCACAGAGGTGCTCC	GRTP1	ENSG00000139835.14	transcript	ENST00000375431.9	protein_coding	4/7			chr13	TogoVar
GRTP1_chr13_113319163_113369130	113346767	C C	CCCAGGAG others(21): Show CCCAGGAGCACCTCTGTGGCTGAGCGGAT	intron_variant intron_variant	MODIFIER	NA19009.hp1 NA19009.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0110 a0001c0001t0001g0110	1	288	0.0035	28	c.466 others(45): Show c.466-1809_466-1808insATCCGCTCAGCCACAGAGGTGCTCCTGG	GRTP1	ENSG00000139835.14	transcript	ENST00000375431.9	protein_coding	4/7			chr13	TogoVar
GRTP1_chr13_113319163_113369130	113346827	C C	CCCAGGAG others(21): Show CCCAGGAGCACCTCTGTGGCTGAGCGGAT	intron_variant intron_variant	MODIFIER	HG01123.hp1 HG01952.hp2 HG01123.hp1 HG01952.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0092 a0001c0001t0002g0066 a0001c0001t0001g0092 a0001c0001t0002g0066	2	288	0.0069	28	c.466 others(45): Show c.466-1869_466-1868insATCCGCTCAGCCACAGAGGTGCTCCTGG	GRTP1	ENSG00000139835.14	transcript	ENST00000375431.9	protein_coding	4/7			chr13	TogoVar
GRTP1_chr13_113319163_113369130	113346857	C C	CCCAGGAG others(21): Show CCCAGGAGCACCTCTGTGGCTGAGCGGAT	intron_variant intron_variant	MODIFIER	HG02132.hp1 HG02132.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0107 a0001c0001t0001g0107	1	288	0.0035	28	c.466 others(45): Show c.466-1899_466-1898insATCCGCTCAGCCACAGAGGTGCTCCTGG	GRTP1	ENSG00000139835.14	transcript	ENST00000375431.9	protein_coding	4/7			chr13	TogoVar
GRTP1_chr13_113319163_113369130	113347155	C C	CGGGAGGA others(21): Show CGGGAGGACCTCTGTGGCTGAGCGGATCT	intron_variant intron_variant	MODIFIER	NA18984.hp2 NA18984.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0231 a0001c0001t0001g0231	1	288	0.0035	28	c.466 others(45): Show c.466-2197_466-2196insAGATCCGCTCAGCCACAGAGGTCCTCCC	GRTP1	ENSG00000139835.14	transcript	ENST00000375431.9	protein_coding	4/7			chr13	TogoVar
GRTP1_chr13_113319163_113369130	113347156	G G	GGGAGGAC others(21): Show GGGAGGACCTCTGTGGCTGAGCGGATCCA	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0113 a0001c0001t0001g0113	1	288	0.0035	28	c.466 others(45): Show c.466-2198_466-2197insTGGATCCGCTCAGCCACAGAGGTCCTCC	GRTP1	ENSG00000139835.14	transcript	ENST00000375431.9	protein_coding	4/7			chr13	TogoVar
GRTP1_chr13_113319163_113369130	113347185	C C	CGGGAGGA others(21): Show CGGGAGGACCTCTGTGGCTGAGCGGATCT	intron_variant intron_variant	MODIFIER	NA18959.hp1 NA18959.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0210 a0001c0001t0001g0210	1	288	0.0035	28	c.466 others(45): Show c.466-2227_466-2226insAGATCCGCTCAGCCACAGAGGTCCTCCC	GRTP1	ENSG00000139835.14	transcript	ENST00000375431.9	protein_coding	4/7			chr13	TogoVar
GRTP1_chr13_113319163_113369130	113347235	A A	ACAGTGGA others(21): Show ACAGTGGACCCGGGAGGACCTCTGTGGCT	intron_variant intron_variant	MODIFIER	HG02486.hp2 homoSapiens_chm13v2.hp1 HG02486.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0065 a0001c0001t0001g0094 a0001c0001t0001g0065 a0001c0001t0001g0094	2	288	0.0069	28	c.466 others(45): Show c.466-2277_466-2276insAGCCACAGAGGTCCTCCCGGGTCCACTG	GRTP1	ENSG00000139835.14	transcript	ENST00000375431.9	protein_coding	4/7			chr13	TogoVar
GRTP1_chr13_113319163_113369130	113347689	C C	CGGGAGGA others(21): Show CGGGAGGACCTCTGTGGCTGAGCGGATCT	intron_variant intron_variant	MODIFIER	HG03239.hp1 HG03239.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0218 a0001c0001t0001g0218	1	288	0.0035	28	c.466 others(45): Show c.466-2731_466-2730insAGATCCGCTCAGCCACAGAGGTCCTCCC	GRTP1	ENSG00000139835.14	transcript	ENST00000375431.9	protein_coding	4/7			chr13	TogoVar
GSAP_chr7_77305751_77421349	77377237	T T	TAAAAAAA others(21): Show TAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0037 a0002c0003t0001g0037	1	352	0.0028	28	c.681 others(41): Show c.681+48_681+49insTTTTTTTTTTTTTTTTTTTTTTTTTTTT	GSAP	ENSG00000186088.16	transcript	ENST00000257626.12	protein_coding	9/30			chr7	TogoVar
GSAP_chr7_77305751_77421349	77402616	A A	AAAAAAAA others(21): Show AAAAAAAAAAAAAAAAAAAAAAAAAAAAT	intron_variant intron_variant	MODIFIER	HG00597.hp2 NA18969.hp2 HG00597.hp2 NA18969.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0330 a0001c0001t0001g0331 a0001c0001t0001g0330 a0001c0001t0001g0331	2	352	0.0057	28	c.243 others(45): Show c.243+1942_243+1943insATTTTTTTTTTTTTTTTTTTTTTTTTTT	GSAP	ENSG00000186088.16	transcript	ENST00000257626.12	protein_coding	3/30			chr7	TogoVar
GSE1_chr16_85608322_85681200	85627044	C C	CTTTTTTT others(21): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01123.hp2 HG03239.hp2 HG01123.hp2 HG03239.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0002c0054 a0001c0002 a0002c0054	a0001c0002t0002 a0002c0054t0032 a0001c0002t0002 a0002c0054t0032	a0001c0002t0002g0250 a0002c0054t0032g0084 a0001c0002t0002g0250 a0002c0054t0032g0084	2	290	0.0069	28	c.8-6 others(41): Show c.8-6865_8-6838dupTTTTTTTTTTTTTTTTTTTTTTTTTTTT	GSE1	ENSG00000131149.19	transcript	ENST00000253458.12	protein_coding	1/15		INFO_REALIGN_3_PRIME	chr16	TogoVar
GSG1L2_chr17_9795608_9827079	9816912	G G	GTGTGTGT others(21): Show GTGTGTGTGTGTATCTGTGTGTGTGTGTC	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0010 a0010	a0010c0015 a0010c0015	a0010c0015t0004 a0010c0015t0004	a0010c0015t0004g0155 a0010c0015t0004g0155	1	474	0.0021	28	c.310 others(45): Show c.310+4849_310+4850insGACACACACACACAGATACACACACACA	GSG1L2	ENSG00000214978.8	transcript	ENST00000399363.5	protein_coding	1/4			chr17	TogoVar
GSG1L2_chr17_9795608_9827079	9816914	G G	GTGTGTGT others(21): Show GTGTGTGTGTATCTGTGTGTGTGTGTCTC	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01243.hp1 HG01109.hp1 HG01243.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0004 a0001c0001t0001 a0001c0003t0004	a0001c0001t0001g0437 a0001c0003t0004g0108 a0001c0001t0001g0437 a0001c0003t0004g0108	2	474	0.0042	28	c.310 others(45): Show c.310+4847_310+4848insGAGACACACACACACAGATACACACACA	GSG1L2	ENSG00000214978.8	transcript	ENST00000399363.5	protein_coding	1/4			chr17	TogoVar

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