Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CHRM2_chr7_136863652_137025213	137000547	A A	AGAAGGAA others(21): Show AGAAGGAAGGAAGGAAAGAAGGAAGGAAG	intron_variant intron_variant	MODIFIER	HG03453.hp1 HG03453.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0028 a0001c0003t0028	a0001c0003t0028g0064 a0001c0003t0028g0064	1	320	0.0031	28	c.-47 others(45): Show c.-47+8298_-47+8299insAGAAGGAAGGAAGGAAGGAAGGAAGGAA	CHRM2	ENSG00000181072.12	transcript	ENST00000680005.1	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr7	TogoVar
CHRM3_chr1_239381568_239920450	239383054	G G	GTCTCTCT others(21): Show GTCTCTCTCTTTCTCTCTCTCTCTCTCTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01106.hp2 HG02109.hp1 HG06807.hp2 others(1): Show HG01106.hp2 HG02109.hp1 HG06807.hp2 NA18943.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0009 a0001c0001t0057 others(1): Show a0001c0001t0001 a0001c0001t0009 a0001c0001t0057 a0001c0001t0058	a0001c0001t0001g0009 a0001c0001t0009g0111 a0001c0001t0057g0084 others(1): Show a0001c0001t0001g0009 a0001c0001t0009g0111 a0001c0001t0057g0084 a0001c0001t0058g0011	4	116	0.0345	28	c.-46 others(39): Show c.-4694_-4693insTCTCTCTCTTTCTCTCTCTCTCTCTCTC	CHRM3	ENSG00000133019.12	transcript	ENST00000676153.1	protein_coding		3513		chr1	TogoVar
CHRM3_chr1_239381568_239920450	239634373	A A	AAATGAAA others(21): Show AAATGAAAGAAAGAAAGACAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG03130.hp2 HG03540.hp1 HG03130.hp2 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0029 a0001c0001t0055 a0001c0001t0029 a0001c0001t0055	a0001c0001t0029g0090 a0001c0001t0055g0113 a0001c0001t0029g0090 a0001c0001t0055g0113	2	116	0.0172	28	c.-25 others(47): Show c.-250+2089_-250+2090insTGAAAGAAAGAAAGACAGAAAGAAAG AA	CHRM3	ENSG00000133019.12	transcript	ENST00000676153.1	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
CHRM3_chr1_239381568_239920450	239634376	C C	CGAAAGAA others(21): Show CGAAAGAAAGAAAGAAAGAAAGAAAGAAA	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02451.hp2 HG03139.hp1 others(1): Show HG01243.hp2 HG02451.hp2 HG03139.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0020 a0001c0001t0027 others(1): Show a0001c0001t0019 a0001c0001t0020 a0001c0001t0027 a0001c0001t0056	a0001c0001t0019g0025 a0001c0001t0020g0021 a0001c0001t0027g0020 others(1): Show a0001c0001t0019g0025 a0001c0001t0020g0021 a0001c0001t0027g0020 a0001c0001t0056g0079	4	116	0.0345	28	c.-25 others(47): Show c.-250+2092_-250+2119dupAAAGAAAGAAAGAAAGAAAGAAAGAA AG	CHRM3	ENSG00000133019.12	transcript	ENST00000676153.1	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
CHRM3_chr1_239381568_239920450	239684748	G G	GAGAAAGA others(21): Show GAGAAAGAAAGAAAGAAAGAAAGAAAGAA	intron_variant intron_variant	MODIFIER	HG03540.hp2 HG03710.hp1 HG03540.hp2 HG03710.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0033 a0001c0001t0002 a0001c0001t0033	a0001c0001t0002g0061 a0001c0001t0033g0018 a0001c0001t0002g0061 a0001c0001t0033g0018	2	116	0.0172	28	c.-14 others(47): Show c.-147+6483_-147+6484insAAGAAAGAAAGAAAGAAAGAAAGAAA GA	CHRM3	ENSG00000133019.12	transcript	ENST00000676153.1	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
CHRNA3_chr15_78590309_78625996	78607483	A A	AAAGTCAG others(21): Show AAAGTCAGGAGATTGAGACCATCCTGGCT	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00597.hp2 HG01243.hp1 others(32): Show HG00408.hp2 HG00597.hp2 HG01243.hp1 HG01346.hp1 HG01358.hp2 HG02055.hp2 HG02083.hp1 HG02258.hp1 HG02451.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02723.hp2 HG02886.hp1 HG02965.hp1 HG03041.hp2 HG03453.hp2 HG03471.hp2 HG03516.hp2 NA18522.hp2 NA18952.hp1 NA18957.hp2 NA18960.hp1 NA18977.hp1 NA18983.hp1 NA18989.hp2 NA19005.hp2 NA19030.hp1 NA19043.hp1 NA19076.hp2 NA19081.hp2 NA19084.hp2 NA19085.hp2 NA19240.hp1 NA21309.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0005 a0001c0004t0006 a0001c0004t0009 others(1): Show a0001c0004t0005 a0001c0004t0006 a0001c0004t0009 a0001c0004t0013	a0001c0004t0005g0016 a0001c0004t0005g0220 a0001c0004t0005g0224 others(25): Show a0001c0004t0005g0016 a0001c0004t0005g0220 a0001c0004t0005g0224 a0001c0004t0005g0235 a0001c0004t0005g0236 a0001c0004t0005g0237 a0001c0004t0005g0238 a0001c0004t0005g0239 a0001c0004t0005g0240 a0001c0004t0005g0241 a0001c0004t0006g0015 a0001c0004t0006g0049 a0001c0004t0006g0050 a0001c0004t0006g0051 a0001c0004t0006g0219 a0001c0004t0006g0225 a0001c0004t0006g0226 a0001c0004t0006g0227 a0001c0004t0006g0228 a0001c0004t0006g0229 a0001c0004t0006g0230 a0001c0004t0006g0231 a0001c0004t0006g0242 a0001c0004t0009g0223 a0001c0004t0009g0233 a0001c0004t0009g0234 a0001c0004t0013g0222 a0001c0004t0013g0232	35	410	0.0854	28	c.378 others(45): Show c.378-5247_378-5220dupAGCCAGGATGGTCTCAATCTCCTGACTT	CHRNA3	ENSG00000080644.16	transcript	ENST00000326828.6	protein_coding	4/5			chr15	TogoVar
CHRNA4_chr20_63338223_63366349	63339738	A A	ACATCATA others(21): Show ACATCATATCCACACAGATGAATGAATTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01074.hp1 NA19043.hp2 HG01074.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0027 a0001c0004t0005 a0001c0001t0027 a0001c0004t0005	a0001c0001t0027g0086 a0001c0004t0005g0013 a0001c0001t0027g0086 a0001c0004t0005g0013	2	168	0.0119	28	c.69 others(39): Show c.6999_*7000insCAATTCATTCATCTGTGTGGATATGATG	CHRNA4	ENSG00000101204.18	transcript	ENST00000370263.9	protein_coding		3484		chr20	TogoVar
CHRNA4_chr20_63338223_63366349	63340291	A A	ACATCATA others(21): Show ACATCATATCCACACAGATGAGTGAATTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01993.hp2 HG02080.hp2 HG02698.hp1 HG01993.hp2 HG02080.hp2 HG02698.hp1	a0000 a0001 a0000 a0001	a0000c0006 a0001c0001 a0001c0003 a0000c0006 a0001c0001 a0001c0003	a0000c0006t0004 a0001c0001t0004 a0001c0003t0002 a0000c0006t0004 a0001c0001t0004 a0001c0003t0002	a0000c0006t0004g0095 a0001c0001t0004g0011 a0001c0003t0002g0016 a0000c0006t0004g0095 a0001c0001t0004g0011 a0001c0003t0002g0016	3	168	0.0179	28	c.64 others(39): Show c.6446_*6447insCAATTCACTCATCTGTGTGGATATGATG	CHRNA4	ENSG00000101204.18	transcript	ENST00000370263.9	protein_coding		2931		chr20	TogoVar
CHRNA4_chr20_63338223_63366349	63359901	G G	GTGTGTGT others(21): Show GTGTGTGTGTGTGTGTGCCGGGCGTGCGC	intron_variant intron_variant	MODIFIER	HG02738.hp1 HG02738.hp2 HG03831.hp2 others(2): Show HG02738.hp1 HG02738.hp2 HG03831.hp2 NA18522.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0001t0004 a0001c0001t0009 others(1): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0009 a0001c0002t0001	a0001c0001t0003g0108 a0001c0001t0004g0083 a0001c0001t0009g0044 others(2): Show a0001c0001t0003g0108 a0001c0001t0004g0083 a0001c0001t0009g0044 a0001c0001t0009g0082 a0001c0002t0001g0075	5	168	0.0298	28	c.77- others(41): Show c.77-203_77-202insGCGCACGCCCGGCACACACACACACACA	CHRNA4	ENSG00000101204.18	transcript	ENST00000370263.9	protein_coding	1/5			chr20	TogoVar
CHRNA4_chr20_63338223_63366349	63359903	G G	GTGTGTGT others(21): Show GTGTGTGTGTGTGTGTGCCGGGCGTGCGC	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG03017.hp1 HG03139.hp2 others(1): Show HG00423.hp1 HG03017.hp1 HG03139.hp2 HG03579.hp2	a0000 a0001 a0000 a0001	a0000c0006 a0001c0001 a0000c0006 a0001c0001	a0000c0006t0003 a0001c0001t0003 a0001c0001t0017 others(1): Show a0000c0006t0003 a0001c0001t0003 a0001c0001t0017 a0001c0001t0034	a0000c0006t0003g0109 a0001c0001t0003g0110 a0001c0001t0017g0015 others(1): Show a0000c0006t0003g0109 a0001c0001t0003g0110 a0001c0001t0017g0015 a0001c0001t0034g0131	4	168	0.0238	28	c.77- others(41): Show c.77-205_77-204insGCGCACGCCCGGCACACACACACACACA	CHRNA4	ENSG00000101204.18	transcript	ENST00000370263.9	protein_coding	1/5			chr20	TogoVar
CHRNB3_chr8_42692366_42742407	42703435	A A	AAAAAAAA others(21): Show AAAAAAAAAAAATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00408.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0165 a0001c0001t0002g0165	1	282	0.0036	28	c.53- others(43): Show c.53-5281_53-5280insAAAAAAAAAATATATATATATATATATA	CHRNB3	ENSG00000147432.7	transcript	ENST00000289957.3	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr8	TogoVar
CHRNB3_chr8_42692366_42742407	42703435	A A	AAAAAAAA others(21): Show AAAAAAAAAATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00280.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0186 a0001c0001t0005g0186	1	282	0.0036	28	c.53- others(43): Show c.53-5281_53-5280insAAAAAAAATATATATATATATATATATA	CHRNB3	ENSG00000147432.7	transcript	ENST00000289957.3	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr8	TogoVar
CHRNB3_chr8_42692366_42742407	42703435	A A	AAAAAAAA others(21): Show AAAAAAAATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00738.hp1 NA18993.hp2 HG00738.hp1 NA18993.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0213 a0001c0001t0002g0258 a0001c0001t0002g0213 a0001c0001t0002g0258	2	282	0.0071	28	c.53- others(43): Show c.53-5281_53-5280insAAAAAATATATATATATATATATATATA	CHRNB3	ENSG00000147432.7	transcript	ENST00000289957.3	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr8	TogoVar
CHRNB3_chr8_42692366_42742407	42703435	A A	AAAAAATA others(21): Show AAAAAATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG02145.hp2 NA18984.hp2 HG01261.hp2 HG02145.hp2 NA18984.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0009 a0001c0001t0002 a0001c0001t0009	a0001c0001t0002g0228 a0001c0001t0002g0230 a0001c0001t0009g0229 a0001c0001t0002g0228 a0001c0001t0002g0230 a0001c0001t0009g0229	3	282	0.0106	28	c.53- others(43): Show c.53-5281_53-5280insAAAATATATATATATATATATATATATA	CHRNB3	ENSG00000147432.7	transcript	ENST00000289957.3	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr8	TogoVar
CHRNB3_chr8_42692366_42742407	42717403	A A	AAAAAAAA others(21): Show AAAAAAAAAAAAAAAAAAAAAAAAAAAAG	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG01928.hp1 HG01975.hp1 others(3): Show HG00597.hp2 HG01928.hp1 HG01975.hp1 NA18967.hp2 NA18975.hp1 NA19079.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0002 a0001c0001t0005	a0001c0001t0002g0145 a0001c0001t0002g0164 a0001c0001t0002g0171 others(3): Show a0001c0001t0002g0145 a0001c0001t0002g0164 a0001c0001t0002g0171 a0001c0001t0002g0195 a0001c0001t0005g0157 a0001c0001t0005g0231	6	282	0.0213	28	c.249 others(45): Show c.249+6971_249+6972insAAAAAAAAAAAAAAAAAAAAAAAAAGAA	CHRNB3	ENSG00000147432.7	transcript	ENST00000289957.3	protein_coding	3/5		INFO_REALIGN_3_PRIME	chr8	TogoVar
CHST11_chr12_104451948_104767014	104537344	A A	AGCATTGA others(21): Show AGCATTGACCTTGAGATACCCAGCATGTG	intron_variant intron_variant	MODIFIER	HG02300.hp1 HG02300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0135 a0001c0001t0001g0135	1	240	0.0042	28	c.119 others(47): Show c.119-64559_119-64532dupATTGACCTTGAGATACCCAGCATGTG GC	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr12	TogoVar
CHST15_chr10_124002668_124098598	124045112	C C	CAAAAAAA others(21): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01358.hp2 NA18957.hp1 NA18966.hp2 HG01358.hp2 NA18957.hp1 NA18966.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0001 a0001c0001t0002 a0001c0001t0003	a0001c0001t0001g0286 a0001c0001t0002g0159 a0001c0001t0003g0131 a0001c0001t0001g0286 a0001c0001t0002g0159 a0001c0001t0003g0131	3	392	0.0077	28	c.547 others(43): Show c.547-221_547-194dupTTTTTTTTTTTTTTTTTTTTTTTTTTTT	CHST15	ENSG00000182022.18	transcript	ENST00000435907.6	protein_coding	2/7			chr10	TogoVar
CHST8_chr19_33616953_33778506	33757522	G G	GAAAGAAA others(21): Show GAAAGAAAGAAAGAAAGAGAAAGAAAGAA	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02280.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0121 a0001c0001t0001g0121	1	254	0.0039	28	c.131 others(47): Show c.131-13890_131-13889insAAGAAAGAAAGAAAGAGAAAGAAAGA AA	CHST8	ENSG00000124302.13	transcript	ENST00000650847.1	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr19	TogoVar
CHST8_chr19_33616953_33778506	33757522	G G	GGAAGGAA others(21): Show GGAAGGAAGGAAGGAAGGAAGGAGAAAGA	intron_variant intron_variant	MODIFIER	NA18970.hp2 NA19060.hp2 NA18970.hp2 NA19060.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0097 a0001c0001t0001g0154 a0001c0001t0001g0097 a0001c0001t0001g0154	2	254	0.0079	28	c.131 others(47): Show c.131-13891_131-13890insGAAGGAAGGAAGGAAGGAAGGAGAAA GA	CHST8	ENSG00000124302.13	transcript	ENST00000650847.1	protein_coding	3/4			chr19	TogoVar
CHST8_chr19_33616953_33778506	33765053	C C	CATATATA others(21): Show CATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG02895.hp2 HG02897.hp1 others(2): Show HG01081.hp2 HG02895.hp2 HG02897.hp1 HG02965.hp2 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0023 a0001c0001t0001g0026 a0001c0001t0001g0102 others(2): Show a0001c0001t0001g0023 a0001c0001t0001g0026 a0001c0001t0001g0102 a0001c0001t0001g0167 a0001c0001t0001g0245	5	254	0.0197	28	c.131 others(45): Show c.131-6340_131-6339insATATATATATATATATATATATATATAT	CHST8	ENSG00000124302.13	transcript	ENST00000650847.1	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr19	TogoVar
CHSY3_chr5_129899465_130191634	130175673	A A	ACTGAACC others(21): Show ACTGAACCCATTACTGAGTTCAGAGGTCT	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG02451.hp1 HG01496.hp1 HG02451.hp1	a0002 a0002	a0002c0007 a0002c0007	a0002c0007t0008 a0002c0007t0008	a0002c0007t0008g0243 a0002c0007t0008g0244 a0002c0007t0008g0243 a0002c0007t0008g0244	2	276	0.0073	28	c.108 others(47): Show c.1087-8555_1087-8554insTGAACCCATTACTGAGTTCAGAGGTC TC	CHSY3	ENSG00000198108.4	transcript	ENST00000305031.5	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr5	TogoVar
CHTF8_chr16_69113010_69137588	69134486	T T	TGAATTGC others(21): Show TGAATTGCCTTCAGGGAAGGCAATTCAGA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02155.hp1 HG02155.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	364	0.0028	28	c.-20 others(39): Show c.-2066_-2039dupTCTGAATTGCCTTCCCTGAAGGCAATTC	CHTF8	ENSG00000168802.14	transcript	ENST00000448552.7	protein_coding		1899		chr16	TogoVar
CIBAR1_chr8_93695550_93736527	93697754	A A	ACATATAT others(21): Show ACATATATATATATACATATATATACATG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01070.hp1 HG01261.hp1 HG02895.hp2 others(3): Show HG01070.hp1 HG01261.hp1 HG02895.hp2 HG02976.hp2 HG03195.hp2 NA19240.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0006 a0002c0002t0004 a0001c0001t0001 a0001c0001t0006 a0002c0002t0004	a0001c0001t0001g0106 a0001c0001t0006g0043 a0001c0001t0006g0144 others(2): Show a0001c0001t0001g0106 a0001c0001t0006g0043 a0001c0001t0006g0144 a0002c0002t0004g0044 a0002c0002t0004g0152	6	374	0.0160	28	c.-28 others(39): Show c.-2894_-2893insCATATATATATATACATATATATACATG	CIBAR1	ENSG00000188343.14	transcript	ENST00000518322.6	protein_coding		2795		chr8	TogoVar
CIBAR1_chr8_93695550_93736527	93697763	T T	TACATATA others(21): Show TACATATATATACATGTATATATATACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00438.hp1 HG00438.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0004	1	374	0.0027	28	c.-28 others(39): Show c.-2885_-2884insACATATATATACATGTATATATATACAC	CIBAR1	ENSG00000188343.14	transcript	ENST00000518322.6	protein_coding		2786		chr8	TogoVar
CIBAR1_chr8_93695550_93736527	93697763	T T	TATACATA others(21): Show TATACATATATATACATGTATATATACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18946.hp1 NA19003.hp2 NA18946.hp1 NA19003.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0008 a0001c0001t0002g0008	2	374	0.0054	28	c.-28 others(39): Show c.-2885_-2884insATACATATATATACATGTATATATACAC	CIBAR1	ENSG00000188343.14	transcript	ENST00000518322.6	protein_coding		2786		chr8	TogoVar
CIBAR1_chr8_93695550_93736527	93697763	T T	TATACATA others(21): Show TATACATATATATACATGTATATATATAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02717.hp2 HG02809.hp2 HG02717.hp2 HG02809.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0145 a0001c0001t0006g0146 a0001c0001t0006g0145 a0001c0001t0006g0146	2	374	0.0054	28	c.-28 others(39): Show c.-2885_-2884insATACATATATATACATGTATATATATAC	CIBAR1	ENSG00000188343.14	transcript	ENST00000518322.6	protein_coding		2786		chr8	TogoVar
CIP2A_chr3_108544864_108594438	108553894	T T	TACAAAAA others(21): Show TACAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00639.hp1 HG00642.hp2 others(14): Show HG00140.hp1 HG00639.hp1 HG00642.hp2 HG00735.hp2 HG01074.hp2 HG01258.hp2 HG01515.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp2 HG02622.hp1 HG03490.hp1 HG03669.hp2 HG03704.hp1 HG03710.hp1 HG03834.hp1 HG06807.hp2	a0001 a0007 a0001 a0007	a0001c0001 a0001c0009 a0007c0010 a0001c0001 a0001c0009 a0007c0010	a0001c0001t0001 a0001c0001t0004 a0001c0009t0001 others(1): Show a0001c0001t0001 a0001c0001t0004 a0001c0009t0001 a0007c0010t0001	a0001c0001t0001g0037 a0001c0001t0001g0103 a0001c0001t0001g0107 others(14): Show a0001c0001t0001g0037 a0001c0001t0001g0103 a0001c0001t0001g0107 a0001c0001t0001g0125 a0001c0001t0001g0203 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0214 a0001c0001t0004g0336 a0001c0001t0004g0339 a0001c0001t0004g0345 a0001c0001t0004g0349 a0001c0001t0004g0351 a0001c0009t0001g0218 a0001c0009t0001g0219 a0001c0009t0001g0220 a0007c0010t0001g0116	17	372	0.0457	28	c.232 others(45): Show c.2325-165_2325-164insTTTTTTTTTTTTTTTTTTTTTTTTTTGT	CIP2A	ENSG00000163507.15	transcript	ENST00000295746.13	protein_coding	18/20			chr3	TogoVar
CIP2A_chr3_108544864_108594438	108569168	C C	CTATATAT others(21): Show CTATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00733.hp1 HG00735.hp2 others(15): Show HG00639.hp1 HG00733.hp1 HG00735.hp2 HG01109.hp2 HG01255.hp1 HG01257.hp1 HG01258.hp2 HG01261.hp1 HG01515.hp1 HG02056.hp2 HG02622.hp2 HG02922.hp1 HG03540.hp2 HG03579.hp1 HG04115.hp1 HG04199.hp2 NA18993.hp1 NA19064.hp2	a0001 a0002 a0007 a0001 a0002 a0007	a0001c0001 a0002c0002 a0007c0010 a0001c0001 a0002c0002 a0007c0010	a0001c0001t0001 a0001c0001t0005 a0002c0002t0001 others(1): Show a0001c0001t0001 a0001c0001t0005 a0002c0002t0001 a0007c0010t0001	a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0091 others(15): Show a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0095 a0001c0001t0001g0100 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0111 a0001c0001t0005g0320 a0001c0001t0005g0344 a0002c0002t0001g0044 a0002c0002t0001g0057 a0002c0002t0001g0072 a0002c0002t0001g0080 a0002c0002t0001g0127 a0002c0002t0001g0138 a0007c0010t0001g0116	18	372	0.0484	28	c.111 others(45): Show c.1113+220_1113+221insTATATATATATATATATATATATATATA	CIP2A	ENSG00000163507.15	transcript	ENST00000295746.13	protein_coding	9/20			chr3	TogoVar
CIP2A_chr3_108544864_108594438	108569177	T T	TATATATA others(21): Show TATATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	NA20300.hp1 NA20300.hp1	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0003 a0006c0007t0003	a0006c0007t0003g0356 a0006c0007t0003g0356	1	372	0.0027	28	c.111 others(45): Show c.1113+211_1113+212insGTATATATATATATATATATATATATAT	CIP2A	ENSG00000163507.15	transcript	ENST00000295746.13	protein_coding	9/20			chr3	TogoVar
CIP2A_chr3_108544864_108594438	108569181	T T	TATATATA others(21): Show TATATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01433.hp2 HG00735.hp1 HG01433.hp2	a0002 a0003 a0002 a0003	a0002c0002 a0003c0005 a0002c0002 a0003c0005	a0002c0002t0001 a0003c0005t0002 a0002c0002t0001 a0003c0005t0002	a0002c0002t0001g0048 a0003c0005t0002g0157 a0002c0002t0001g0048 a0003c0005t0002g0157	2	372	0.0054	28	c.111 others(45): Show c.1113+207_1113+208insGTATATATATATATATATATATATATAT	CIP2A	ENSG00000163507.15	transcript	ENST00000295746.13	protein_coding	9/20			chr3	TogoVar
CKAP2L_chr2_112731349_112769609	112734169	A A	ATATATAT others(21): Show ATATATATGTGTGTGTGTGTGTGTGTGTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0016 a0001c0004t0016	a0001c0004t0016g0136 a0001c0004t0016g0136	1	300	0.0033	28	c.46 others(39): Show c.4653_*4654insCACACACACACACACACACACATATATA	CKAP2L	ENSG00000169607.13	transcript	ENST00000302450.11	protein_coding		2179		chr2	TogoVar
CKAP2L_chr2_112731349_112769609	112734169	A A	ATATATGT others(21): Show ATATATGTGTGTGTGTGTGTGTGTGTGTG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0003 a0003	a0003c0011 a0003c0011	a0003c0011t0010 a0003c0011t0010	a0003c0011t0010g0009 a0003c0011t0010g0009	1	300	0.0033	28	c.46 others(39): Show c.4653_*4654insCACACACACACACACACACACACATATA	CKAP2L	ENSG00000169607.13	transcript	ENST00000302450.11	protein_coding		2179		chr2	TogoVar
CKAP4_chr12_106232881_106253020	106237526	C C	CAAAAAAA others(21): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG04228.hp2 NA19064.hp2 NA19074.hp2 others(2): Show HG04228.hp2 NA19064.hp2 NA19074.hp2 NA19076.hp1 NA19088.hp1	a0002 a0013 a0002 a0013	a0002c0002 a0013c0016 a0002c0002 a0013c0016	a0002c0002t0002 a0002c0002t0005 a0013c0016t0002 a0002c0002t0002 a0002c0002t0005 a0013c0016t0002	a0002c0002t0002g0002 a0002c0002t0005g0038 a0013c0016t0002g0074 a0002c0002t0002g0002 a0002c0002t0005g0038 a0013c0016t0002g0074	5	418	0.0120	28	c.14 others(39): Show c.1497_*1498insTTTTTTTTTTTTTTTTTTTTTTTTTTTT	CKAP4	ENSG00000136026.14	transcript	ENST00000378026.5	protein_coding		354		chr12	TogoVar
CKMT2_chr5_81228322_81271398	81250940	A A	AACACACA others(21): Show AACACACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG02300.hp2 HG02572.hp2 others(1): Show HG00438.hp1 HG02300.hp2 HG02572.hp2 NA19064.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0002t0001	a0001c0001t0001g0168 a0001c0001t0002g0267 a0001c0001t0003g0210 others(1): Show a0001c0001t0001g0168 a0001c0001t0002g0267 a0001c0001t0003g0210 a0001c0002t0001g0162	4	356	0.0112	28	c.-20 others(43): Show c.-20-161_-20-134dupCACACACACACACACACACACACACACA	CKMT2	ENSG00000131730.16	transcript	ENST00000254035.9	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr5	TogoVar
CKMT2_chr5_81228322_81271398	81250978	C C	CACACACA others(21): Show CACACACACACACACACACACACACAGAA	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0218 a0001c0001t0001g0218	1	356	0.0028	28	c.-20 others(43): Show c.-20-134_-20-133insCACACACACACACACACACACACAGAAA	CKMT2	ENSG00000131730.16	transcript	ENST00000254035.9	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr5	TogoVar
CLASP1_chr2_121332776_121654462	121633028	A A	ATATATAT others(21): Show ATATATATATATATATATATATATATATG	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG02132.hp2 NA18612.hp2 others(4): Show HG00738.hp2 HG02132.hp2 NA18612.hp2 NA18968.hp2 NA19057.hp1 NA20129.hp1 NA20905.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0009 a0001c0002t0010 others(2): Show a0001c0002t0005 a0001c0002t0009 a0001c0002t0010 a0001c0002t0013 a0001c0002t0016	a0001c0002t0005g0160 a0001c0002t0009g0155 a0001c0002t0010g0183 others(4): Show a0001c0002t0005g0160 a0001c0002t0009g0155 a0001c0002t0010g0183 a0001c0002t0010g0184 a0001c0002t0013g0134 a0001c0002t0016g0181 a0001c0002t0016g0186	7	214	0.0327	28	c.-28 others(49): Show c.-286+16343_-286+16344insCATATATATATATATATATATATA TATA	CLASP1	ENSG00000074054.21	transcript	ENST00000696935.1	protein_coding	1/40			chr2	TogoVar
CLASP2_chr3_33491245_33723254	33506377	C C	CAAAAAAA others(21): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG06807.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0231 a0001c0001t0001g0231	1	278	0.0036	28	c.431 others(47): Show c.4317+4180_4317+4181insTTTTTTTTTTTTTTTTTTTTTTTTTT TT	CLASP2	ENSG00000163539.19	transcript	ENST00000682230.1	protein_coding	37/38			chr3	TogoVar
CLASP2_chr3_33491245_33723254	33568553	C C	CAAAAAAA others(21): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01175.hp2 NA18947.hp1 HG01175.hp2 NA18947.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0002 a0001c0001t0003	a0001c0001t0002g0068 a0001c0001t0003g0150 a0001c0001t0002g0068 a0001c0001t0003g0150	2	278	0.0072	28	c.276 others(47): Show c.2764-1820_2764-1819insTTTTTTTTTTTTTTTTTTTTTTTTTT TT	CLASP2	ENSG00000163539.19	transcript	ENST00000682230.1	protein_coding	26/38			chr3	TogoVar
CLASP2_chr3_33491245_33723254	33571015	A A	ATTTTTTT others(21): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18939.hp1 NA18939.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0046 a0001c0001t0003g0046	1	278	0.0036	28	c.270 others(45): Show c.2700-226_2700-225insAAAAAAAAAAAAAAAAAAAAAAAAAAAA	CLASP2	ENSG00000163539.19	transcript	ENST00000682230.1	protein_coding	25/38			chr3	TogoVar
CLBA1_chr14_104980788_105000516	104985884	T T	TGCGGGGC others(21): Show TGCGGGGCCCGGGCCCGGGCCCAGGACAC	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00140.hp1 HG00323.hp2 HG00438.hp1 others(161): Show HG00140.hp1 HG00323.hp2 HG00438.hp1 HG00621.hp1 HG00639.hp2 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01074.hp1 HG01099.hp1 HG01167.hp1 HG01168.hp1 HG01169.hp1 HG01175.hp1 HG01261.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01975.hp1 HG02004.hp1 HG02027.hp1 HG02055.hp2 HG02071.hp2 HG02074.hp2 HG02109.hp1 HG02109.hp2 HG02132.hp2 HG02148.hp1 HG02155.hp1 HG02257.hp1 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02280.hp1 HG02280.hp2 HG02300.hp2 HG02451.hp2 HG02486.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02976.hp2 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03471.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03710.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp2 HG04115.hp1 HG04199.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp2 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18940.hp2 NA18942.hp1 NA18944.hp1 NA18946.hp2 NA18948.hp1 NA18948.hp2 NA18951.hp2 NA18952.hp1 NA18954.hp1 NA18956.hp1 NA18957.hp2 NA18960.hp2 NA18962.hp1 NA18970.hp1 NA18970.hp2 NA18974.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18985.hp2 NA18986.hp1 NA18988.hp2 NA18991.hp1 NA18998.hp1 NA19000.hp2 NA19003.hp1 NA19005.hp2 NA19010.hp2 NA19011.hp1 NA19030.hp1 NA19030.hp2 NA19057.hp1 NA19058.hp1 NA19059.hp2 NA19063.hp2 NA19064.hp1 NA19067.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19077.hp1 NA19079.hp1 NA19080.hp1 NA19081.hp2 NA19083.hp2 NA19085.hp2 NA19086.hp1 NA19087.hp2 NA19089.hp1 NA19089.hp2 NA19091.hp1 NA20752.hp1	a0001 a0003 a0006 others(1): Show a0001 a0003 a0006 a0010	a0001c0001 a0001c0002 a0001c0004 others(4): Show a0001c0001 a0001c0002 a0001c0004 a0001c0012 a0003c0005 a0006c0009 a0010c0011	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(12): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0010 a0001c0001t0022 a0001c0001t0024 a0001c0002t0003 a0001c0002t0023 a0001c0004t0007 a0001c0012t0003 a0003c0005t0002 a0003c0005t0025 a0006c0009t0002 a0010c0011t0002	a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0011 others(65): Show a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0011 a0001c0001t0002g0013 a0001c0001t0002g0017 a0001c0001t0002g0020 a0001c0001t0002g0021 a0001c0001t0002g0022 a0001c0001t0002g0027 a0001c0001t0002g0031 a0001c0001t0002g0044 a0001c0001t0002g0045 a0001c0001t0002g0046 a0001c0001t0002g0050 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0064 a0001c0001t0002g0066 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0070 a0001c0001t0002g0072 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0086 a0001c0001t0003g0012 a0001c0001t0003g0030 a0001c0001t0003g0058 a0001c0001t0003g0059 a0001c0001t0003g0071 a0001c0001t0004g0019 a0001c0001t0004g0024 a0001c0001t0004g0043 a0001c0001t0004g0079 a0001c0001t0004g0087 a0001c0001t0004g0088 a0001c0001t0004g0089 a0001c0001t0004g0090 a0001c0001t0004g0091 a0001c0001t0004g0092 a0001c0001t0004g0094 a0001c0001t0004g0103 a0001c0001t0005g0007 a0001c0001t0005g0026 a0001c0001t0005g0032 a0001c0001t0005g0073 a0001c0001t0010g0007 a0001c0001t0022g0080 a0001c0001t0024g0017 a0001c0002t0003g0029 a0001c0002t0003g0052 a0001c0002t0003g0063 a0001c0002t0003g0065 a0001c0002t0023g0029 a0001c0004t0007g0014 a0001c0004t0007g0076 a0001c0004t0007g0077 a0001c0004t0007g0081 a0001c0012t0003g0062 a0003c0005t0002g0028 a0003c0005t0002g0067 a0003c0005t0025g0051 a0006c0009t0002g0093 a0010c0011t0002g0047	164	444	0.3694	28	c.-54 others(37): Show c.-542_-541insCCCGGGCCCGGGCCCAGGACACGCGGGG	CLBA1	ENSG00000140104.14	transcript	ENST00000547315.6	protein_coding	1/5	541	INFO_REALIGN_3_PRIME	chr14	TogoVar
CLCN3_chr4_169615578_169728673	169720526	T T	TTCTCTCT others(21): Show TTCTCTCTCTCTCTCTCTCTCTCTCTCTC	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03704.hp1 HG03704.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0048 a0001c0001t0048	a0001c0001t0048g0225 a0001c0001t0048g0225	1	288	0.0035	28	c.53 others(37): Show c.535_*562dupCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CLCN3	ENSG00000109572.16	transcript	ENST00000513761.6	protein_coding	13/13	563	INFO_REALIGN_3_PRIME	chr4	TogoVar
CLCN4_chrX_10151975_10242660	10212837	G G	GCACACAC others(21): Show GCACACACACACACACACACACACACACA	intron_variant intron_variant	MODIFIER	NA20300.hp2 NA20300.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0015 a0001c0002t0015	a0001c0002t0015g0030 a0001c0002t0015g0030	1	264	0.0038	28	c.157 others(45): Show c.1576+186_1576+187insCACACACACACACACACACACACACACA	CLCN4	ENSG00000073464.13	transcript	ENST00000380833.9	protein_coding	10/12		INFO_REALIGN_3_PRIME	chrX	TogoVar
CLCN4_chrX_10151975_10242660	10216897	G G	GTATATAT others(21): Show GTATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01071.hp1 HG01257.hp1 others(1): Show HG01070.hp2 HG01071.hp1 HG01257.hp1 HG02622.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0004 a0001c0002t0002 a0001c0002t0004 a0001c0001t0004 a0001c0002t0002 a0001c0002t0004	a0001c0001t0004g0158 a0001c0002t0002g0039 a0001c0002t0002g0040 others(1): Show a0001c0001t0004g0158 a0001c0002t0002g0039 a0001c0002t0002g0040 a0001c0002t0004g0031	4	264	0.0152	28	c.197 others(47): Show c.1975+2840_1975+2841insTATATATATATATATATATATATATA TA	CLCN4	ENSG00000073464.13	transcript	ENST00000380833.9	protein_coding	11/12		INFO_REALIGN_3_PRIME	chrX	TogoVar
CLCN4_chrX_10151975_10242660	10216918	T T	TATATATA others(21): Show TATATATATATATATATATACACACACAC	intron_variant intron_variant	MODIFIER	HG02129.hp1 HG02129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0025 a0001c0001t0025	a0001c0001t0025g0129 a0001c0001t0025g0129	1	264	0.0038	28	c.197 others(47): Show c.1975+2840_1975+2841insTATATATATATATATATACACACACA CA	CLCN4	ENSG00000073464.13	transcript	ENST00000380833.9	protein_coding	11/12		INFO_REALIGN_3_PRIME	chrX	TogoVar
CLDN10_chr13_95547720_95584759	95575590	C C	CGTGTGTG others(21): Show CGTGTGTGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0010 a0001c0003t0010	a0001c0003t0010g0183 a0001c0003t0010g0183	1	400	0.0025	28	c.465 others(45): Show c.465-1629_465-1628insGTGTGTGTGTGTGTGTGTGTGTGTGTGT	CLDN10	ENSG00000134873.10	transcript	ENST00000299339.3	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr13	TogoVar
CLEC4F_chr2_70803643_70825599	70813597	C C	CTCTTTCT others(21): Show CTCTTTCTTTCTTTCTTTCTTTCTTTCTT	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG01175.hp1 others(18): Show HG00140.hp1 HG00140.hp2 HG01175.hp1 HG01261.hp1 HG01516.hp2 HG01517.hp1 HG01934.hp1 HG01934.hp2 HG01993.hp1 HG02145.hp2 HG02257.hp1 HG02630.hp2 HG03139.hp2 HG03834.hp1 HG03927.hp2 NA18939.hp2 NA19003.hp1 NA19004.hp2 NA19005.hp1 NA19043.hp1 NA20129.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0015	a0001c0002 a0002c0001 a0003c0003 others(2): Show a0001c0002 a0002c0001 a0003c0003 a0004c0004 a0015c0015	a0001c0002t0001 a0001c0002t0002 a0002c0001t0001 others(3): Show a0001c0002t0001 a0001c0002t0002 a0002c0001t0001 a0003c0003t0003 a0004c0004t0004 a0015c0015t0010	a0001c0002t0001g0178 a0001c0002t0001g0206 a0001c0002t0001g0226 others(9): Show a0001c0002t0001g0178 a0001c0002t0001g0206 a0001c0002t0001g0226 a0001c0002t0002g0051 a0001c0002t0002g0183 a0001c0002t0002g0190 a0002c0001t0001g0005 a0002c0001t0001g0102 a0002c0001t0001g0130 a0003c0003t0003g0207 a0004c0004t0004g0172 a0015c0015t0010g0136	21	414	0.0507	28	c.138 others(47): Show c.1388-1027_1388-1000dupAAGAAAGAAAGAAAGAAAGAAAGAAA GA	CLEC4F	ENSG00000152672.8	transcript	ENST00000272367.7	protein_coding	4/6			chr2	TogoVar
CLEC4G_chr19_7723957_7737110	7732906	A A	AAAAAAAA others(21): Show AAAAAAAAAAAATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02129.hp1 NA21309.hp1 HG02129.hp1 NA21309.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0006c0007 a0001c0001 a0006c0007	a0001c0001t0001 a0006c0007t0001 a0001c0001t0001 a0006c0007t0001	a0001c0001t0001g0002 a0006c0007t0001g0014 a0001c0001t0001g0002 a0006c0007t0001g0014	2	432	0.0046	28	c.-80 others(37): Show c.-805_-804insATATATATATATATATATTTTTTTTTTT	CLEC4G	ENSG00000182566.15	transcript	ENST00000328853.11	protein_coding		797		chr19	TogoVar
CLEC4G_chr19_7723957_7737110	7732906	A A	AAAAAAAA others(21): Show AAAAAAAAAATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03130.hp1 NA18978.hp2 HG03130.hp1 NA18978.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	2	432	0.0046	28	c.-80 others(37): Show c.-805_-804insATATATATATATATATATATTTTTTTTT	CLEC4G	ENSG00000182566.15	transcript	ENST00000328853.11	protein_coding		797		chr19	TogoVar
CLEC4G_chr19_7723957_7737110	7732906	A A	AAAAAAAA others(21): Show AAAAAAAATATACATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01069.hp1 HG01071.hp2 HG01069.hp1 HG01071.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	2	432	0.0046	28	c.-80 others(37): Show c.-805_-804insATATATATATATATATGTATATTTTTTT	CLEC4G	ENSG00000182566.15	transcript	ENST00000328853.11	protein_coding		797		chr19	TogoVar
CLEC4G_chr19_7723957_7737110	7732906	A A	AAAAAAAA others(21): Show AAAAAAAATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18906.hp2 NA19043.hp2 NA19087.hp1 others(1): Show NA18906.hp2 NA19043.hp2 NA19087.hp1 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0029 a0001c0001t0001g0001 a0001c0001t0001g0029	4	432	0.0093	28	c.-80 others(37): Show c.-805_-804insATATATATATATATATATATATTTTTTT	CLEC4G	ENSG00000182566.15	transcript	ENST00000328853.11	protein_coding		797		chr19	TogoVar

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