Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
F7_chr13_113100791_113125685	113105038	A A	AATATATA others(21): Show AATATATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02735.hp2 HG02735.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0075 a0002c0002t0003g0075	1	400	0.0025	28	c.-80 others(37): Show c.-804_-803insATATATATATATATATATATATATATAT	F7	ENSG00000057593.14	transcript	ENST00000346342.8	protein_coding		752		chr13	TogoVar
F8A2_chrX_155377095_155388801	155384120	A A	ATTTTTTT others(21): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp1 HG00639.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0000 a0001c0001t0002g0000	1	267	0.0038	28	c.89 others(37): Show c.890_*891insTTTTTTTTTTTTTTTTTTTTTTTTTTTT	F8A2	ENSG00000288709.1	transcript	ENST00000369505.5	protein_coding		320		chrX	TogoVar
FA2H_chr16_74707969_74779820	74741808	A A	ATATATAT others(21): Show ATATATATATATATATATATATATGTGTG	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG00733.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0196 a0001c0002t0001g0196	1	388	0.0026	28	c.271 others(45): Show c.271-1694_271-1693insCACACATATATATATATATATATATATA	FA2H	ENSG00000103089.9	transcript	ENST00000219368.8	protein_coding	1/6			chr16	TogoVar
FAAH2_chrX_57281706_57494193	57306990	C C	CAGATATA others(21): Show CAGATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18952.hp1 NA19064.hp2 NA18952.hp1 NA19064.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0027 a0001c0001t0001g0028	2	282	0.0071	28	c.276 others(45): Show c.276-3602_276-3601insGATATATATATATATATATATATATATA	FAAH2	ENSG00000165591.7	transcript	ENST00000374900.5	protein_coding	2/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
FAAH2_chrX_57281706_57494193	57306994	G G	GATATATA others(21): Show GATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00733.hp1 HG00733.hp2 others(25): Show HG00140.hp1 HG00733.hp1 HG00733.hp2 HG01106.hp1 HG01109.hp1 HG01192.hp1 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01975.hp1 HG01975.hp2 HG02004.hp2 HG02083.hp1 HG02523.hp1 HG02683.hp1 HG02735.hp1 HG03017.hp1 HG03239.hp2 HG03490.hp1 HG03942.hp1 HG04115.hp1 HG06807.hp1 NA18953.hp1 NA18962.hp1 NA18973.hp1 NA18973.hp2 NA18982.hp1 NA19084.hp1	a0001 a0008 a0001 a0008	a0001c0001 a0001c0002 a0008c0005 a0001c0001 a0001c0002 a0008c0005	a0001c0001t0001 a0001c0002t0002 a0008c0005t0001 a0001c0001t0001 a0001c0002t0002 a0008c0005t0001	a0001c0001t0001g0020 a0001c0001t0001g0048 a0001c0001t0001g0049 others(25): Show a0001c0001t0001g0020 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0061 a0001c0001t0001g0070 a0001c0001t0001g0075 a0001c0001t0001g0099 a0001c0001t0001g0110 a0001c0001t0001g0112 a0001c0001t0001g0140 a0001c0001t0001g0277 a0001c0002t0002g0119 a0001c0002t0002g0120 a0001c0002t0002g0137 a0001c0002t0002g0157 a0001c0002t0002g0166 a0001c0002t0002g0185 a0001c0002t0002g0186 a0001c0002t0002g0187 a0001c0002t0002g0195 a0001c0002t0002g0196 a0001c0002t0002g0197 a0001c0002t0002g0198 a0001c0002t0002g0204 a0001c0002t0002g0207 a0001c0002t0002g0250 a0001c0002t0002g0281 a0008c0005t0001g0019	28	282	0.0993	28	c.276 others(45): Show c.276-3596_276-3595insTATATATATATATATATATATATATATA	FAAH2	ENSG00000165591.7	transcript	ENST00000374900.5	protein_coding	2/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
FAAH2_chrX_57281706_57494193	57307016	T T	TATATATA others(21): Show TATATATATATATATATATATATATATAG	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG00609.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0062 a0001c0001t0001g0062	1	282	0.0036	28	c.276 others(45): Show c.276-3576_276-3575insTATATATATATATATATATATATATAGA	FAAH2	ENSG00000165591.7	transcript	ENST00000374900.5	protein_coding	2/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
FABP7_chr6_122774716_122789074	122777845	A A	AAAATAAA others(21): Show AAAATAAATAAATAAATAAATAAATAAAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01255.hp2 NA18949.hp2 NA18957.hp1 others(3): Show HG01255.hp2 NA18949.hp2 NA18957.hp1 NA18980.hp2 NA19055.hp1 NA19064.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0025 others(1): Show a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0025 a0001c0001t0003g0048	6	480	0.0125	28	c.-19 others(39): Show c.-1950_-1949insAAATAAATAAATAAATAAATAAATAAAT	FABP7	ENSG00000164434.12	transcript	ENST00000368444.8	protein_coding		1870		chr6	TogoVar
FADS2_chr11_61823300_61872354	61824433	A A	AGAGAGAG others(21): Show AGAGAGAGAGAGAGAGAGAGAGAGAGAGC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01515.hp1 HG01515.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0015 a0001c0001t0002g0015	1	280	0.0036	28	c.-39 others(39): Show c.-3958_-3957insGAGAGAGAGAGAGAGAGAGAGAGAGAGC	FADS2	ENSG00000134824.14	transcript	ENST00000278840.9	protein_coding		3866		chr11	TogoVar
FADS2_chr11_61823300_61872354	61861353	C C	CAAAAAAA others(21): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02451.hp1 NA18953.hp1 NA19000.hp1 others(1): Show HG02451.hp1 NA18953.hp1 NA19000.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0025 a0001c0001t0001g0033 a0001c0001t0001g0080 others(1): Show a0001c0001t0001g0025 a0001c0001t0001g0033 a0001c0001t0001g0080 a0001c0001t0001g0177	4	280	0.0143	28	c.883 others(45): Show c.883-1601_883-1600insAAAAAAAAAAAAAAAAAAAAAAAAAAAA	FADS2	ENSG00000134824.14	transcript	ENST00000278840.9	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr11	TogoVar
FAF1_chr1_50432028_50965267	50457724	C C	CAAAAAAA others(21): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01517.hp2 HG01517.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0006 a0001c0001t0016g0006	1	190	0.0053	28	c.187 others(49): Show c.1870-16202_1870-16201insTTTTTTTTTTTTTTTTTTTTTTTT TTTT	FAF1	ENSG00000185104.21	transcript	ENST00000396153.7	protein_coding	18/18			chr1	TogoVar
FAF1_chr1_50432028_50965267	50554390	T T	TATATATA others(21): Show TATATATATATATAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02132.hp2 HG02132.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0035 a0001c0001t0003g0035	1	190	0.0053	28	c.126 others(49): Show c.1268+12686_1268+12687insCTCTCTCTCTCTCTCTATATATAT ATAT	FAF1	ENSG00000185104.21	transcript	ENST00000396153.7	protein_coding	13/18			chr1	TogoVar
FAF1_chr1_50432028_50965267	50819730	C C	CATATATA others(21): Show CATATATATATACGTATATATATATACAT	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02922.hp2 HG02970.hp1 HG02486.hp2 HG02922.hp2 HG02970.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0099 a0001c0001t0001g0163 a0001c0001t0001g0177 a0001c0001t0001g0099 a0001c0001t0001g0163 a0001c0001t0001g0177	3	190	0.0158	28	c.115 others(47): Show c.115-18054_115-18053insATGTATATATATATACGTATATATAT AT	FAF1	ENSG00000185104.21	transcript	ENST00000396153.7	protein_coding	2/18			chr1	TogoVar
FAF1_chr1_50432028_50965267	50819740	C C	CGTATATA others(21): Show CGTATATATATATACATATATATATACGT	intron_variant intron_variant	MODIFIER	HG04115.hp1 HG04115.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0130 a0001c0001t0002g0130	1	190	0.0053	28	c.115 others(47): Show c.115-18064_115-18063insACGTATATATATATGTATATATATAT AC	FAF1	ENSG00000185104.21	transcript	ENST00000396153.7	protein_coding	2/18			chr1	TogoVar
FAF1_chr1_50432028_50965267	50819742	T T	TATATATA others(21): Show TATATATATATACGTATATATATATATAC	intron_variant intron_variant	MODIFIER	HG06807.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0023 a0001c0001t0023	a0001c0001t0023g0010 a0001c0001t0023g0010	1	190	0.0053	28	c.115 others(47): Show c.115-18066_115-18065insGTATATATATATATACGTATATATAT AT	FAF1	ENSG00000185104.21	transcript	ENST00000396153.7	protein_coding	2/18			chr1	TogoVar
FAF1_chr1_50432028_50965267	50885312	T T	TCTCTCTC others(21): Show TCTCTCTCACACACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02717.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0020	a0001c0001t0020g0181 a0001c0001t0020g0181	1	190	0.0053	28	c.46- others(45): Show c.46-27316_46-27315insTGTGTGTGTGTGTGTGTGTGTGAGAGAG	FAF1	ENSG00000185104.21	transcript	ENST00000396153.7	protein_coding	1/18			chr1	TogoVar
FAHD1_chr16_1822206_1833910	1830915	T T	TCTACACA others(21): Show TCTACACACACACACACACACACACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0000 a0001c0001t0018g0000	1	448	0.0022	28	c.30 others(39): Show c.3011_*3012insCTACACACACACACACACACACACACAC	FAHD1	ENSG00000180185.13	transcript	ENST00000427358.5	protein_coding		2006		chr16	TogoVar
FAIM2_chr12_49861896_49908900	49864716	G G	GTGTGTGT others(21): Show GTGTGTGTGTGCGCACACACGCATGTGCA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18994.hp2 NA18994.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0245 a0001c0001t0008g0245	1	436	0.0023	28	c.57 others(39): Show c.5787_*5788insTGCACATGCGTGTGTGCGCACACACACA	FAIM2	ENSG00000135472.9	transcript	ENST00000320634.8	protein_coding		2179		chr12	TogoVar
FAM104A_chr17_73202365_73237394	73234773	C C	CTGTGTGT others(21): Show CTGTGTGTGTGTGTGTGTGTGTGTGTGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00642.hp2 HG01256.hp2 HG02148.hp2 others(6): Show HG00642.hp2 HG01256.hp2 HG02148.hp2 NA18961.hp1 NA18964.hp1 NA18975.hp1 NA18994.hp1 NA19003.hp2 NA19057.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0022 a0001c0001t0001 a0001c0001t0022	a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0001g0074 others(4): Show a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0001g0074 a0001c0001t0001g0083 a0001c0001t0001g0148 a0001c0001t0001g0356 a0001c0001t0022g0086	9	400	0.0225	28	c.-24 others(39): Show c.-2468_-2467insCACACACACACACACACACACACACACA	FAM104A	ENSG00000133193.13	transcript	ENST00000405159.8	protein_coding		2380		chr17	TogoVar
FAM107B_chr10_14513557_14779897	14572736	A A	ATTATATA others(21): Show ATTATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0142 a0001c0001t0011g0142	1	272	0.0037	28	c.470 others(47): Show c.470-42222_470-42221insATATATATATATATATATATATATAT AA	FAM107B	ENSG00000065809.14	transcript	ENST00000181796.7	protein_coding	2/4			chr10	TogoVar
FAM107B_chr10_14513557_14779897	14572736	A A	ATTTTATA others(21): Show ATTTTATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01358.hp1 HG01358.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0156 a0001c0001t0001g0156	1	272	0.0037	28	c.470 others(47): Show c.470-42222_470-42221insATATATATATATATATATATATATAA AA	FAM107B	ENSG00000065809.14	transcript	ENST00000181796.7	protein_coding	2/4			chr10	TogoVar
FAM107B_chr10_14513557_14779897	14737766	T T	TTCTCTCT others(21): Show TTCTCTCTCTCTCTCTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG01169.hp2 HG02074.hp1 HG02135.hp2 others(1): Show HG01169.hp2 HG02074.hp1 HG02135.hp2 NA18987.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0002c0002t0002 a0002c0002t0003 a0001c0001t0002 a0002c0002t0002 a0002c0002t0003	a0001c0001t0002g0058 a0001c0001t0002g0059 a0002c0002t0002g0260 others(1): Show a0001c0001t0002g0058 a0001c0001t0002g0059 a0002c0002t0002g0260 a0002c0002t0003g0265	4	272	0.0147	28	c.411 others(47): Show c.411+36459_411+36486dupGAGAGAGAGAGAGAGAGAGAGAGAGA GA	FAM107B	ENSG00000065809.14	transcript	ENST00000181796.7	protein_coding	1/4			chr10	TogoVar
FAM107B_chr10_14513557_14779897	14767024	G G	GTATATAT others(21): Show GTATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03017.hp1 HG03017.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0218 a0001c0001t0002g0218	1	272	0.0037	28	c.411 others(45): Show c.411+7201_411+7228dupTATATATATATATATATATATATATATA	FAM107B	ENSG00000065809.14	transcript	ENST00000181796.7	protein_coding	1/4			chr10	TogoVar
FAM107B_chr10_14513557_14779897	14767055	T T	TATATATA others(21): Show TATATATATATATATAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG01169.hp1 HG01169.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0173 a0001c0001t0001g0173	1	272	0.0037	28	c.411 others(45): Show c.411+7197_411+7198insCTCTCTCTCTCTCTATATATATATATAT	FAM107B	ENSG00000065809.14	transcript	ENST00000181796.7	protein_coding	1/4			chr10	TogoVar
FAM107B_chr10_14513557_14779897	14767055	T T	TATATATA others(21): Show TATATATATATATATATAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0065 a0001c0001t0001g0065	1	272	0.0037	28	c.411 others(45): Show c.411+7197_411+7198insCTCTCTCTCTCTATATATATATATATAT	FAM107B	ENSG00000065809.14	transcript	ENST00000181796.7	protein_coding	1/4			chr10	TogoVar
FAM107B_chr10_14513557_14779897	14767055	T T	TATATATA others(21): Show TATATATATATATATATATAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG01496.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0166 a0001c0001t0004g0166	1	272	0.0037	28	c.411 others(45): Show c.411+7197_411+7198insCTCTCTCTCTATATATATATATATATAT	FAM107B	ENSG00000065809.14	transcript	ENST00000181796.7	protein_coding	1/4			chr10	TogoVar
FAM107B_chr10_14513557_14779897	14767055	T T	TATATATA others(21): Show TATATATATATATATATATATAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02155.hp2 HG02155.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0244 a0002c0002t0001g0244	1	272	0.0037	28	c.411 others(45): Show c.411+7197_411+7198insCTCTCTCTATATATATATATATATATAT	FAM107B	ENSG00000065809.14	transcript	ENST00000181796.7	protein_coding	1/4			chr10	TogoVar
FAM107B_chr10_14513557_14779897	14767055	T T	TATATATA others(21): Show TATATATATATATATATATATATAGAGAG	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01168.hp2 NA18942.hp2 others(1): Show HG01106.hp1 HG01168.hp2 NA18942.hp2 NA18983.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0001 a0001c0001t0003 a0001c0001t0004	a0001c0001t0001g0162 a0001c0001t0003g0129 a0001c0001t0003g0221 others(1): Show a0001c0001t0001g0162 a0001c0001t0003g0129 a0001c0001t0003g0221 a0001c0001t0004g0110	4	272	0.0147	28	c.411 others(45): Show c.411+7197_411+7198insCTCTCTATATATATATATATATATATAT	FAM107B	ENSG00000065809.14	transcript	ENST00000181796.7	protein_coding	1/4			chr10	TogoVar
FAM107B_chr10_14513557_14779897	14767055	T T	TATATATA others(21): Show TATATATATATATATATATATATATAGAG	intron_variant intron_variant	MODIFIER	NA19004.hp2 NA19004.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0152 a0001c0001t0003g0152	1	272	0.0037	28	c.411 others(45): Show c.411+7197_411+7198insCTCTATATATATATATATATATATATAT	FAM107B	ENSG00000065809.14	transcript	ENST00000181796.7	protein_coding	1/4			chr10	TogoVar
FAM107B_chr10_14513557_14779897	14767055	T T	TATATATA others(21): Show TATATATATATATATATATATATATATAG	intron_variant intron_variant	MODIFIER	NA19009.hp1 NA19009.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0245 a0002c0002t0002g0245	1	272	0.0037	28	c.411 others(45): Show c.411+7197_411+7198insCTATATATATATATATATATATATATAT	FAM107B	ENSG00000065809.14	transcript	ENST00000181796.7	protein_coding	1/4			chr10	TogoVar
FAM110A_chr20_828715_851277	850134	C C	CACACACA others(21): Show CACACACACACACACACACACACACACAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19056.hp2 NA19056.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0155 a0001c0001t0003g0155	1	436	0.0023	28	c.44 others(39): Show c.4442_*4443insACACACACACACACACACACACACACAT	FAM110A	ENSG00000125898.13	transcript	ENST00000381941.8	protein_coding		3858		chr20	TogoVar
FAM110B_chr8_57989523_58153784	58006923	A A	ATATATAT others(21): Show ATATATATATATATATATATATATTTTTT	intron_variant intron_variant	MODIFIER	HG03579.hp1 NA18906.hp2 HG03579.hp1 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0001 a0001c0001t0005	a0001c0001t0001g0006 a0001c0001t0005g0139 a0001c0001t0001g0006 a0001c0001t0005g0139	2	300	0.0067	28	c.-51 others(49): Show c.-512+12118_-512+12119insATATATATATATATATATATATTT TTTT	FAM110B	ENSG00000169122.12	transcript	ENST00000519262.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr8	TogoVar
FAM110B_chr8_57989523_58153784	58047591	C C	CCTCTCTC others(21): Show CCTCTCTCTCTCTCTCTCTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00544.hp1 HG02155.hp2 others(6): Show HG00280.hp1 HG00544.hp1 HG02155.hp2 HG03209.hp1 NA18952.hp2 NA18953.hp2 NA18984.hp1 NA18994.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0001 a0001c0001t0002 a0001c0001t0003	a0001c0001t0001g0046 a0001c0001t0001g0098 a0001c0001t0001g0103 others(6): Show a0001c0001t0001g0046 a0001c0001t0001g0098 a0001c0001t0001g0103 a0001c0001t0002g0039 a0001c0001t0002g0126 a0001c0001t0003g0129 a0001c0001t0003g0134 a0001c0001t0003g0233 a0001c0001t0003g0235	9	300	0.0300	28	c.-41 others(49): Show c.-414+15905_-414+15932dupCTCTCTCTCTCTCTCTCTCTCTCT CTCT	FAM110B	ENSG00000169122.12	transcript	ENST00000519262.6	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr8	TogoVar
FAM110B_chr8_57989523_58153784	58075271	T T	TTGTGTGT others(21): Show TTGTGTGTGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0185 a0001c0001t0001g0185	1	300	0.0033	28	c.-41 others(45): Show c.-413-263_-413-262insGTGTGTGTGTGTGTGTGTGTGTGTGTGT	FAM110B	ENSG00000169122.12	transcript	ENST00000519262.6	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr8	TogoVar
FAM111A_chr11_59137856_59160039	59141914	G G	GAAAGAAA others(21): Show GAAAGAAAGAAAGAAAGAAAGAAAGAGAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02895.hp1 HG02897.hp1 HG02895.hp1 HG02897.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0013 a0001c0002t0014 a0001c0002t0013 a0001c0002t0014	a0001c0002t0013g0029 a0001c0002t0014g0029 a0001c0002t0013g0029 a0001c0002t0014g0029	2	442	0.0045	28	c.-15 others(39): Show c.-1560_-1559insAAAGAAAGAAAGAAAGAAAGAAAGAGAA	FAM111A	ENSG00000166801.17	transcript	ENST00000675163.1	protein_coding		941		chr11	TogoVar
FAM117B_chr2_202629969_202774757	202642344	A A	AATATATA others(21): Show AATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0096 a0002c0002t0096	a0002c0002t0096g0317 a0002c0002t0096g0317	1	318	0.0031	28	c.601 others(45): Show c.601+6577_601+6578insTATATATATATATATATATATATATATA	FAM117B	ENSG00000138439.12	transcript	ENST00000392238.3	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr2	TogoVar
FAM117B_chr2_202629969_202774757	202731332	A A	AAAATATA others(21): Show AAAATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18986.hp2 NA18986.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0132 a0001c0001t0132	a0001c0001t0132g0237 a0001c0001t0132g0237	1	318	0.0031	28	c.960 others(45): Show c.960+4970_960+4971insAATATATATATATATATATATATATATA	FAM117B	ENSG00000138439.12	transcript	ENST00000392238.3	protein_coding	4/7		INFO_REALIGN_3_PRIME	chr2	TogoVar
FAM118B_chr11_126206782_126267968	126235871	C C	CTACTTAT others(21): Show CTACTTATACATAAGTAGTATTCTCAGCT	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01243.hp2 HG01891.hp1 others(22): Show HG01109.hp1 HG01243.hp2 HG01891.hp1 HG02055.hp2 HG02257.hp2 HG02258.hp2 HG02486.hp2 HG02572.hp1 HG02647.hp1 HG02717.hp2 HG02809.hp2 HG02922.hp1 HG02976.hp1 HG03041.hp2 HG03130.hp1 HG03139.hp2 HG03209.hp2 HG03239.hp1 HG03453.hp2 HG03471.hp2 HG03516.hp2 HG03540.hp1 HG03579.hp1 NA18906.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0107 a0001c0001t0001g0132 a0001c0001t0001g0133 others(22): Show a0001c0001t0001g0107 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161	25	346	0.0723	28	c.86+ others(41): Show c.86+784_86+785insTACTTATACATAAGTAGTATTCTCAGCT	FAM118B	ENSG00000197798.9	transcript	ENST00000533050.6	protein_coding	3/8			chr11	TogoVar
FAM118B_chr11_126206782_126267968	126235871	C C	CTCCTTAT others(21): Show CTCCTTATACATAAGTAGTATTCTCAGCT	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02965.hp2 HG03139.hp1 others(2): Show HG02622.hp1 HG02965.hp2 HG03139.hp1 NA18522.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0007 a0001c0001t0001g0139 a0001c0001t0001g0140 others(1): Show a0001c0001t0001g0007 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0153	5	346	0.0145	28	c.86+ others(41): Show c.86+784_86+785insTCCTTATACATAAGTAGTATTCTCAGCT	FAM118B	ENSG00000197798.9	transcript	ENST00000533050.6	protein_coding	3/8			chr11	TogoVar
FAM120A_chr9_93446685_93571112	93545780	C C	CTTTTTTT others(21): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02818.hp1 NA18974.hp1 NA19083.hp2 HG02818.hp1 NA18974.hp1 NA19083.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0004 a0001c0001t0014 a0001c0003t0002 a0001c0001t0004 a0001c0001t0014 a0001c0003t0002	a0001c0001t0004g0034 a0001c0001t0014g0035 a0001c0003t0002g0008 a0001c0001t0004g0034 a0001c0001t0014g0035 a0001c0003t0002g0008	3	318	0.0094	28	c.215 others(47): Show c.2159+2335_2159+2336insTTTTTTTTTTTTTTTTTTTTTTTTTT TT	FAM120A	ENSG00000048828.18	transcript	ENST00000277165.11	protein_coding	11/17		INFO_REALIGN_3_PRIME	chr9	TogoVar
FAM120A_chr9_93446685_93571112	93554120	T T	TACACACA others(21): Show TACACACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02055.hp2 NA18944.hp2 HG02055.hp2 NA18944.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0002g0277 a0001c0002t0001g0270 a0001c0001t0002g0277 a0001c0002t0001g0270	2	318	0.0063	28	c.227 others(47): Show c.2275-2229_2275-2202dupACACACACACACACACACACACACAC AC	FAM120A	ENSG00000048828.18	transcript	ENST00000277165.11	protein_coding	12/17		INFO_REALIGN_3_PRIME	chr9	TogoVar
FAM135B_chr8_138125023_138502261	138206201	C C	CCACAGCT others(21): Show CCACAGCTCTCTCATCCCCTCCACCCACA	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02486.hp2 HG02886.hp1 others(1): Show HG02258.hp1 HG02486.hp2 HG02886.hp1 HG03453.hp2	a0002 a0003 a0004 a0002 a0003 a0004	a0002c0002 a0003c0001 a0004c0009 a0002c0002 a0003c0001 a0004c0009	a0002c0002t0005 a0002c0002t0009 a0003c0001t0006 others(1): Show a0002c0002t0005 a0002c0002t0009 a0003c0001t0006 a0004c0009t0008	a0002c0002t0005g0194 a0002c0002t0009g0164 a0003c0001t0006g0155 others(1): Show a0002c0002t0005g0194 a0002c0002t0009g0164 a0003c0001t0006g0155 a0004c0009t0008g0130	4	212	0.0189	28	c.670 others(45): Show c.670-8533_670-8532insTGTGGGTGGAGGGGATGAGAGAGCTGTG	FAM135B	ENSG00000147724.12	transcript	ENST00000395297.6	protein_coding	7/19			chr8	TogoVar
FAM135B_chr8_138125023_138502261	138206294	T T	TATCATCC others(21): Show TATCATCCCCTCCACCTACCCAGGGCTCC	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00558.hp2 HG00673.hp1 others(41): Show HG00558.hp1 HG00558.hp2 HG00673.hp1 HG01071.hp1 HG01255.hp1 HG01517.hp2 HG01884.hp1 HG01952.hp1 HG01981.hp1 HG02015.hp1 HG02015.hp2 HG02056.hp2 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp2 HG02630.hp2 HG02683.hp2 HG02735.hp2 HG02738.hp2 HG02896.hp2 HG02897.hp1 HG03453.hp1 HG03669.hp1 HG03688.hp1 HG03831.hp1 HG03834.hp2 HG04199.hp2 NA18952.hp1 NA18952.hp2 NA18960.hp2 NA18968.hp2 NA18970.hp2 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA19000.hp1 NA19002.hp2 NA19009.hp2 NA19012.hp1 NA19056.hp1 NA19065.hp1 NA19065.hp2 NA19066.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0010	a0001c0003 a0001c0004 a0001c0005 others(8): Show a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0007 a0001c0022 a0002c0002 a0002c0008 a0002c0029 a0003c0001 a0010c0027	a0001c0003t0003 a0001c0003t0010 a0001c0003t0018 others(23): Show a0001c0003t0003 a0001c0003t0010 a0001c0003t0018 a0001c0003t0038 a0001c0004t0001 a0001c0004t0002 a0001c0004t0005 a0001c0004t0008 a0001c0005t0001 a0001c0005t0005 a0001c0006t0005 a0001c0007t0003 a0001c0022t0003 a0002c0002t0001 a0002c0002t0005 a0002c0002t0012 a0002c0008t0001 a0002c0029t0001 a0003c0001t0002 a0003c0001t0004 a0003c0001t0013 a0003c0001t0017 a0003c0001t0021 a0003c0001t0025 a0003c0001t0035 a0010c0027t0001	a0001c0003t0003g0056 a0001c0003t0003g0077 a0001c0003t0003g0083 others(41): Show a0001c0003t0003g0056 a0001c0003t0003g0077 a0001c0003t0003g0083 a0001c0003t0010g0205 a0001c0003t0010g0208 a0001c0003t0018g0178 a0001c0003t0038g0207 a0001c0004t0001g0034 a0001c0004t0001g0071 a0001c0004t0001g0101 a0001c0004t0002g0150 a0001c0004t0005g0203 a0001c0004t0008g0128 a0001c0005t0001g0052 a0001c0005t0001g0057 a0001c0005t0005g0210 a0001c0006t0005g0187 a0001c0007t0003g0065 a0001c0022t0003g0011 a0002c0002t0001g0003 a0002c0002t0001g0009 a0002c0002t0001g0017 a0002c0002t0001g0022 a0002c0002t0001g0028 a0002c0002t0001g0039 a0002c0002t0001g0046 a0002c0002t0001g0053 a0002c0002t0001g0063 a0002c0002t0001g0075 a0002c0002t0001g0082 a0002c0002t0001g0086 a0002c0002t0005g0197 a0002c0002t0012g0124 a0002c0008t0001g0107 a0002c0029t0001g0010 a0003c0001t0002g0169 a0003c0001t0004g0012 a0003c0001t0013g0199 a0003c0001t0017g0172 a0003c0001t0017g0173 a0003c0001t0021g0212 a0003c0001t0025g0113 a0003c0001t0035g0153 a0010c0027t0001g0079	44	212	0.2076	28	c.670 others(45): Show c.670-8626_670-8625insGGAGCCCTGGGTAGGTGGAGGGGATGAT	FAM135B	ENSG00000147724.12	transcript	ENST00000395297.6	protein_coding	7/19			chr8	TogoVar
FAM135B_chr8_138125023_138502261	138226184	T T	TGTGTGTG others(21): Show TGTGTGTGTGTGTGTGTGCGCGCGCGCGC	intron_variant intron_variant	MODIFIER	NA19009.hp1 NA19009.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0010 a0001c0003t0010	a0001c0003t0010g0195 a0001c0003t0010g0195	1	212	0.0047	28	c.669 others(47): Show c.669+16757_669+16758insGCGCGCGCGCGCACACACACACACAC AC	FAM135B	ENSG00000147724.12	transcript	ENST00000395297.6	protein_coding	7/19			chr8	TogoVar
FAM135B_chr8_138125023_138502261	138226184	T T	TGTGTGTG others(21): Show TGTGTGTGTGTGTGTGTGTGTGCGCGCGC	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0001	a0001c0005t0001g0090 a0001c0005t0001g0090	1	212	0.0047	28	c.669 others(47): Show c.669+16757_669+16758insGCGCGCGCACACACACACACACACAC AC	FAM135B	ENSG00000147724.12	transcript	ENST00000395297.6	protein_coding	7/19			chr8	TogoVar
FAM135B_chr8_138125023_138502261	138314693	C C	CAATAAAT others(21): Show CAATAAATAAATAAATAAATAAATAAATA	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01071.hp1 HG01071.hp2 others(17): Show HG01069.hp2 HG01071.hp1 HG01071.hp2 HG01169.hp1 HG01243.hp2 HG01261.hp1 HG02056.hp2 HG02109.hp1 HG02257.hp2 HG02451.hp1 HG02647.hp2 HG02735.hp1 HG03239.hp1 HG03516.hp2 HG03831.hp2 HG03834.hp2 NA18906.hp2 NA19000.hp1 NA19060.hp1 NA20300.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0008 a0009	a0001c0003 a0001c0004 a0001c0005 others(7): Show a0001c0003 a0001c0004 a0001c0005 a0001c0007 a0001c0010 a0002c0002 a0002c0019 a0003c0001 a0008c0016 a0009c0026	a0001c0003t0003 a0001c0004t0001 a0001c0004t0002 others(10): Show a0001c0003t0003 a0001c0004t0001 a0001c0004t0002 a0001c0005t0002 a0001c0007t0003 a0001c0010t0011 a0002c0002t0001 a0002c0002t0002 a0002c0019t0015 a0003c0001t0004 a0003c0001t0006 a0008c0016t0008 a0009c0026t0001	a0001c0003t0003g0056 a0001c0003t0003g0077 a0001c0004t0001g0091 others(17): Show a0001c0003t0003g0056 a0001c0003t0003g0077 a0001c0004t0001g0091 a0001c0004t0001g0092 a0001c0004t0001g0095 a0001c0004t0002g0156 a0001c0005t0002g0141 a0001c0007t0003g0044 a0001c0010t0011g0118 a0002c0002t0001g0003 a0002c0002t0001g0038 a0002c0002t0001g0039 a0002c0002t0001g0102 a0002c0002t0002g0132 a0002c0019t0015g0112 a0003c0001t0004g0062 a0003c0001t0004g0100 a0003c0001t0006g0171 a0008c0016t0008g0127 a0009c0026t0001g0072	20	212	0.0943	28	c.78- others(43): Show c.78-3801_78-3774dupTATTTATTTATTTATTTATTTATTTATT	FAM135B	ENSG00000147724.12	transcript	ENST00000395297.6	protein_coding	2/19			chr8	TogoVar
FAM135B_chr8_138125023_138502261	138414119	C C	CATATATA others(21): Show CATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02615.hp2 HG02896.hp2 others(3): Show HG01243.hp2 HG02615.hp2 HG02896.hp2 HG02897.hp1 HG03688.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0004 a0001c0005 a0002c0002 others(1): Show a0001c0004 a0001c0005 a0002c0002 a0003c0001	a0001c0004t0001 a0001c0005t0001 a0002c0002t0001 others(2): Show a0001c0004t0001 a0001c0005t0001 a0002c0002t0001 a0003c0001t0006 a0003c0001t0017	a0001c0004t0001g0034 a0001c0005t0001g0090 a0002c0002t0001g0070 others(3): Show a0001c0004t0001g0034 a0001c0005t0001g0090 a0002c0002t0001g0070 a0003c0001t0006g0171 a0003c0001t0017g0172 a0003c0001t0017g0173	6	212	0.0283	28	c.-19 others(47): Show c.-19-46118_-19-46117insATATATATATATATATATATATATAT AT	FAM135B	ENSG00000147724.12	transcript	ENST00000395297.6	protein_coding	1/19			chr8	TogoVar
FAM135B_chr8_138125023_138502261	138442267	T T	TATATATA others(21): Show TATATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0001	a0001c0005t0001g0090 a0001c0005t0001g0090	1	212	0.0047	28	c.-20 others(47): Show c.-20+54403_-20+54404insGTATATATATATATATATATATATAT AT	FAM135B	ENSG00000147724.12	transcript	ENST00000395297.6	protein_coding	1/19			chr8	TogoVar
FAM136A_chr2_70290976_70307067	70304465	A A	AAAGCAAG others(21): Show AAAGCAAGCAAGCAAGCAAGCAAGCAAGC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18962.hp1 NA18962.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0001	1	440	0.0023	28	c.-24 others(39): Show c.-2455_-2454insGCTTGCTTGCTTGCTTGCTTGCTTGCTT	FAM136A	ENSG00000035141.10	transcript	ENST00000430566.6	protein_coding		2399		chr2	TogoVar
FAM136A_chr2_70290976_70307067	70304500	G G	GCAAGCAA others(21): Show GCAAGCAAGCAAGCAAGCAAGCAAGCAAC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18961.hp2 NA18961.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0008 a0001c0001t0003g0008	1	440	0.0023	28	c.-24 others(39): Show c.-2490_-2489insGTTGCTTGCTTGCTTGCTTGCTTGCTTG	FAM136A	ENSG00000035141.10	transcript	ENST00000430566.6	protein_coding		2434		chr2	TogoVar
FAM13A_chr4_88720960_89062185	88945990	G G	GTGTGTAT others(21): Show GTGTGTATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03486.hp1 NA18954.hp1 HG03486.hp1 NA18954.hp1	a0001 a0003 a0001 a0003	a0001c0003 a0003c0006 a0001c0003 a0003c0006	a0001c0003t0004 a0003c0006t0016 a0001c0003t0004 a0003c0006t0016	a0001c0003t0004g0122 a0003c0006t0016g0114 a0001c0003t0004g0122 a0003c0006t0016g0114	2	208	0.0096	28	c.606 others(45): Show c.606-7750_606-7749insTATATATATATATATATATATATACACA	FAM13A	ENSG00000138640.15	transcript	ENST00000264344.10	protein_coding	4/23			chr4	TogoVar

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