Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
FERMT2_chr14_52852273_52956050	52943208	C C	CAAAAAAA others(21): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0092 a0001c0001t0001g0092	1	288	0.0035	28	c.157 others(45): Show c.157+7203_157+7204insTTTTTTTTTTTTTTTTTTTTTTTTTTTT	FERMT2	ENSG00000073712.15	transcript	ENST00000341590.8	protein_coding	2/14			chr14	TogoVar
FER_chr5_108742897_109201841	108879697	A A	AATATATA others(21): Show AATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02683.hp2 HG02683.hp2	a0001 a0001	a0001c0015 a0001c0015	a0001c0015t0044 a0001c0015t0044	a0001c0015t0044g0128 a0001c0015t0044g0128	1	138	0.0073	28	c.924 others(45): Show c.924-3698_924-3697insTATATATATATATATATATATATATATA	FER	ENSG00000151422.14	transcript	ENST00000281092.9	protein_coding	8/19		INFO_REALIGN_3_PRIME	chr5	TogoVar
FEZ1_chr11_125437881_125501265	125493493	A A	AGAAGGAA others(21): Show AGAAGGAAAGAAGGAAAGAAGGAAAGAAG	intron_variant intron_variant	MODIFIER	NA19068.hp1 NA19068.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0079 a0001c0001t0003g0079	1	356	0.0028	28	c.-46 others(45): Show c.-46+2627_-46+2628insCTTCTTTCCTTCTTTCCTTCTTTCCTTC	FEZ1	ENSG00000149557.14	transcript	ENST00000278919.8	protein_coding	1/9			chr11	TogoVar
FGA_chr4_154580275_154595742	154584089	A A	AGAAGACA others(21): Show AGAAGACAGAGTGCTCCCATTCCCACTTC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp1 HG00323.hp1 HG00408.hp1 others(150): Show HG00140.hp1 HG00323.hp1 HG00408.hp1 HG00423.hp1 HG00423.hp2 HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp2 HG00733.hp1 HG00738.hp2 HG00741.hp1 HG01074.hp2 HG01081.hp2 HG01099.hp2 HG01109.hp2 HG01123.hp1 HG01167.hp2 HG01168.hp2 HG01169.hp2 HG01243.hp1 HG01243.hp2 HG01257.hp2 HG01358.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp1 HG01975.hp1 HG02015.hp2 HG02027.hp1 HG02055.hp1 HG02055.hp2 HG02109.hp2 HG02129.hp2 HG02132.hp1 HG02145.hp1 HG02165.hp1 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02293.hp1 HG02486.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp2 HG02615.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG02723.hp2 HG02735.hp2 HG02738.hp2 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02896.hp2 HG02897.hp2 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02976.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03209.hp2 HG03453.hp2 HG03471.hp2 HG03486.hp2 HG03490.hp2 HG03492.hp2 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03834.hp2 HG03927.hp1 HG03942.hp2 HG04115.hp1 HG04184.hp2 HG04228.hp1 HG04228.hp2 NA18522.hp1 NA18612.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp2 NA18940.hp1 NA18943.hp1 NA18944.hp1 NA18946.hp1 NA18948.hp1 NA18949.hp1 NA18956.hp2 NA18957.hp1 NA18961.hp2 NA18962.hp2 NA18964.hp2 NA18967.hp1 NA18968.hp1 NA18968.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18978.hp2 NA18979.hp1 NA18983.hp2 NA18987.hp2 NA18988.hp2 NA18989.hp1 NA18991.hp2 NA18993.hp1 NA18994.hp1 NA18999.hp1 NA19001.hp2 NA19002.hp1 NA19003.hp1 NA19006.hp2 NA19007.hp2 NA19030.hp1 NA19030.hp2 NA19054.hp1 NA19055.hp1 NA19057.hp1 NA19058.hp1 NA19063.hp1 NA19064.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19068.hp2 NA19070.hp1 NA19072.hp2 NA19074.hp1 NA19076.hp2 NA19077.hp1 NA19079.hp1 NA19083.hp1 NA19084.hp2 NA19086.hp2 NA19087.hp2 NA19089.hp1 NA19091.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp2 NA20805.hp2 homoSapiens_chm13v2.hp1	a0002 a0005 a0007 a0002 a0005 a0007	a0002c0002 a0005c0011 a0007c0009 a0002c0002 a0005c0011 a0007c0009	a0002c0002t0001 a0002c0002t0004 a0005c0011t0001 others(1): Show a0002c0002t0001 a0002c0002t0004 a0005c0011t0001 a0007c0009t0001	a0002c0002t0001g0001 a0002c0002t0001g0002 a0002c0002t0001g0003 others(23): Show a0002c0002t0001g0001 a0002c0002t0001g0002 a0002c0002t0001g0003 a0002c0002t0001g0005 a0002c0002t0001g0009 a0002c0002t0001g0016 a0002c0002t0001g0023 a0002c0002t0001g0031 a0002c0002t0001g0035 a0002c0002t0001g0043 a0002c0002t0001g0044 a0002c0002t0001g0048 a0002c0002t0001g0054 a0002c0002t0001g0058 a0002c0002t0001g0059 a0002c0002t0001g0079 a0002c0002t0001g0083 a0002c0002t0001g0084 a0002c0002t0001g0086 a0002c0002t0001g0093 a0002c0002t0001g0099 a0002c0002t0001g0102 a0002c0002t0001g0108 a0002c0002t0004g0082 a0005c0011t0001g0081 a0007c0009t0001g0092	153	428	0.3575	28	c.13 others(39): Show c.1377_*1404dupGAAGTGGGAATGGGAGCACTCTGTCTTC	FGA	ENSG00000171560.18	transcript	ENST00000403106.8	protein_coding		1185		chr4	TogoVar
FGA_chr4_154580275_154595742	154587745	G G	GAGAAAGA others(21): Show GAGAAAGAAAGAAAGAAAGAAAGAAGGAA	intron_variant intron_variant	MODIFIER	HG03540.hp1 HG03579.hp2 HG03540.hp1 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0042 a0001c0001t0001g0042	2	428	0.0047	28	c.365 others(41): Show c.365-89_365-88insTTCCTTCTTTCTTTCTTTCTTTCTTTCT	FGA	ENSG00000171560.18	transcript	ENST00000403106.8	protein_coding	3/4			chr4	TogoVar
FGD1_chrX_54440454_54501234	54482236	G G	GCACACAC others(21): Show GCACACACACACACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0174 a0001c0001t0004g0174	1	264	0.0038	28	c.308 others(47): Show c.308-10777_308-10750dupTGTGTGTGTGTGTGTGTGTGTGTGTG TG	FGD1	ENSG00000102302.8	transcript	ENST00000375135.4	protein_coding	1/17			chrX	TogoVar
FGD4_chr12_32394558_32651050	32422288	C C	CTTTTTTT others(21): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02895.hp1 NA18942.hp2 others(1): Show HG02717.hp2 HG02895.hp1 NA18942.hp2 NA18947.hp2	a0001 a0002 a0010 a0001 a0002 a0010	a0001c0003 a0001c0004 a0002c0005 others(1): Show a0001c0003 a0001c0004 a0002c0005 a0010c0021	a0001c0003t0013 a0001c0004t0014 a0002c0005t0038 others(1): Show a0001c0003t0013 a0001c0004t0014 a0002c0005t0038 a0010c0021t0058	a0001c0003t0013g0097 a0001c0004t0014g0062 a0002c0005t0038g0170 others(1): Show a0001c0003t0013g0097 a0001c0004t0014g0062 a0002c0005t0038g0170 a0010c0021t0058g0093	4	232	0.0172	28	c.166 others(47): Show c.166+22330_166+22357dupTTTTTTTTTTTTTTTTTTTTTTTTTT TT	FGD4	ENSG00000139132.16	transcript	ENST00000534526.7	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr12	TogoVar
FGD4_chr12_32394558_32651050	32585222	T T	TTATATAT others(21): Show TTATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0014 a0001c0004t0014	a0001c0004t0014g0056 a0001c0004t0014g0056	1	232	0.0043	28	c.101 others(47): Show c.1011+2763_1011+2790dupATATATATATATATATATATATATAT AT	FGD4	ENSG00000139132.16	transcript	ENST00000534526.7	protein_coding	4/16		INFO_REALIGN_3_PRIME	chr12	TogoVar
FGD4_chr12_32394558_32651050	32599494	C C	CAAAAAAA others(21): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG02559.hp2 NA18612.hp2 others(2): Show HG01358.hp2 HG02559.hp2 NA18612.hp2 NA18981.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0003 a0002c0005 a0002c0006 a0001c0003 a0002c0005 a0002c0006	a0001c0003t0003 a0001c0003t0043 a0002c0005t0009 others(2): Show a0001c0003t0003 a0001c0003t0043 a0002c0005t0009 a0002c0005t0030 a0002c0006t0007	a0001c0003t0003g0013 a0001c0003t0043g0029 a0002c0005t0009g0187 others(2): Show a0001c0003t0003g0013 a0001c0003t0043g0029 a0002c0005t0009g0187 a0002c0005t0030g0214 a0002c0006t0007g0196	5	232	0.0216	28	c.110 others(45): Show c.1101+922_1101+923insAAAAAAAAAAAAAAAAAAAAAAAAAAAA	FGD4	ENSG00000139132.16	transcript	ENST00000534526.7	protein_coding	5/16		INFO_REALIGN_3_PRIME	chr12	TogoVar
FGD5_chr3_14813962_14939571	14844217	A A	AAAAAAAA others(21): Show AAAAAAAAAAAAAATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01975.hp1 HG01975.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0267 a0001c0002t0002g0267	1	342	0.0029	28	c.252 others(49): Show c.2526-19910_2526-19909insAAAAAAAAAAAATATATATATATA TATA	FGD5	ENSG00000154783.12	transcript	ENST00000285046.10	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr3	TogoVar
FGD6_chr12_95071749_95222467	95072617	T T	TTTTTAAA others(21): Show TTTTTAAAGGCTGACCTACTTACTGAAGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0005 a0002c0005t0005	a0002c0005t0005g0254 a0002c0005t0005g0254	1	384	0.0026	28	c.88 others(39): Show c.8875_*8902dupTCTTCAGTAAGTAGGTCAGCCTTTAAAA	FGD6	ENSG00000180263.14	transcript	ENST00000343958.9	protein_coding		4131		chr12	TogoVar
FGD6_chr12_95071749_95222467	95083012	A A	AAAAAAAA others(21): Show AAAAAAAAAAAAAATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01168.hp2 HG01168.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0246 a0002c0002t0003g0246	1	384	0.0026	28	c.425 others(47): Show c.4257-1457_4257-1456insATATATATATATATATTTTTTTTTTT TT	FGD6	ENSG00000180263.14	transcript	ENST00000343958.9	protein_coding	20/20			chr12	TogoVar
FGD6_chr12_95071749_95222467	95083012	A A	AAAAAAAA others(21): Show AAAAAAAATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG02273.hp1 HG03209.hp2 others(2): Show HG00735.hp2 HG02273.hp1 HG03209.hp2 NA18961.hp1 NA20300.hp1	a0002 a0002	a0002c0002 a0002c0005 a0002c0002 a0002c0005	a0002c0002t0003 a0002c0002t0074 a0002c0005t0008 a0002c0002t0003 a0002c0002t0074 a0002c0005t0008	a0002c0002t0003g0218 a0002c0002t0003g0260 a0002c0002t0003g0266 others(2): Show a0002c0002t0003g0218 a0002c0002t0003g0260 a0002c0002t0003g0266 a0002c0002t0074g0219 a0002c0005t0008g0253	5	384	0.0130	28	c.425 others(47): Show c.4257-1457_4257-1456insATATATATATATATATATATATTTTT TT	FGD6	ENSG00000180263.14	transcript	ENST00000343958.9	protein_coding	20/20			chr12	TogoVar
FGD6_chr12_95071749_95222467	95083012	A A	AATATATA others(21): Show AATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG01517.hp1 HG00099.hp1 HG01517.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0009 a0001c0001t0013g0016 a0001c0001t0013g0009 a0001c0001t0013g0016	2	384	0.0052	28	c.425 others(47): Show c.4257-1457_4257-1456insATATATATATATATATATATATATAT AT	FGD6	ENSG00000180263.14	transcript	ENST00000343958.9	protein_coding	20/20			chr12	TogoVar
FGD6_chr12_95071749_95222467	95083030	T T	TATATATA others(21): Show TATATATATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	NA18963.hp2 NA18968.hp2 NA18982.hp1 others(3): Show NA18963.hp2 NA18968.hp2 NA18982.hp1 NA18989.hp2 NA18992.hp2 NA19056.hp1	a0001 a0002 a0001 a0002	a0001c0010 a0002c0002 a0001c0010 a0002c0002	a0001c0010t0016 a0002c0002t0003 a0002c0002t0032 a0001c0010t0016 a0002c0002t0003 a0002c0002t0032	a0001c0010t0016g0092 a0002c0002t0003g0229 a0002c0002t0003g0231 others(3): Show a0001c0010t0016g0092 a0002c0002t0003g0229 a0002c0002t0003g0231 a0002c0002t0003g0259 a0002c0002t0032g0230 a0002c0002t0032g0272	6	384	0.0156	28	c.425 others(47): Show c.4256+1467_4256+1468insGTGTATATATATATATATATATATAT AT	FGD6	ENSG00000180263.14	transcript	ENST00000343958.9	protein_coding	20/20			chr12	TogoVar
FGD6_chr12_95071749_95222467	95149112	C C	CATATATT others(21): Show CATATATTATATAATATATAGCATATATT	intron_variant intron_variant	MODIFIER	NA20752.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0322 a0001c0001t0010g0322	1	384	0.0026	28	c.268 others(47): Show c.2685+3671_2685+3698dupAATATATGCTATATATTATATAATAT AT	FGD6	ENSG00000180263.14	transcript	ENST00000343958.9	protein_coding	5/20			chr12	TogoVar
FGD6_chr12_95071749_95222467	95177908	A A	AATTTATT others(21): Show AATTTATTTATTTATTTATTTATTTATTT	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0029 a0001c0001t0029	a0001c0001t0029g0299 a0001c0001t0029g0299	1	384	0.0026	28	c.244 others(47): Show c.2442-5192_2442-5165dupAAATAAATAAATAAATAAATAAATAA AT	FGD6	ENSG00000180263.14	transcript	ENST00000343958.9	protein_coding	2/20			chr12	TogoVar
FGF10_chr5_44295247_44394420	44349451	T T	TATATATA others(21): Show TATATATATATATATATATATATATCAGA	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01071.hp1 HG01070.hp2 HG01071.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0003 a0001c0001t0008g0003	2	350	0.0057	28	c.325 others(47): Show c.325+38906_325+38907insTCTGATATATATATATATATATATAT AT	FGF10	ENSG00000070193.5	transcript	ENST00000264664.5	protein_coding	1/2			chr5	TogoVar
FGF12_chr3_192134390_192732541	192279230	G G	GTATATAT others(21): Show GTATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0035 a0001c0001t0016g0035	1	90	0.0111	28	c.228 others(47): Show c.228+56130_228+56131insTATATATATATATATATATATATATA TA	FGF12	ENSG00000114279.15	transcript	ENST00000445105.7	protein_coding	4/5			chr3	TogoVar
FGF12_chr3_192134390_192732541	192512835	A A	AATAAATA others(21): Show AATAAATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01934.hp2 HG02809.hp1 HG02976.hp2 others(1): Show HG01934.hp2 HG02809.hp1 HG02976.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0009 a0001c0001t0018 others(1): Show a0001c0001t0003 a0001c0001t0009 a0001c0001t0018 a0001c0001t0028	a0001c0001t0003g0059 a0001c0001t0009g0085 a0001c0001t0018g0024 others(1): Show a0001c0001t0003g0059 a0001c0001t0009g0085 a0001c0001t0018g0024 a0001c0001t0028g0033	4	90	0.0444	28	c.14- others(47): Show c.14-152298_14-152297insATATATATATATATATATATATATTT AT	FGF12	ENSG00000114279.15	transcript	ENST00000445105.7	protein_coding	2/5			chr3	TogoVar
FGF12_chr3_192134390_192732541	192512835	A A	AATATATA others(21): Show AATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0022	a0001c0001t0022g0028 a0001c0001t0022g0028	1	90	0.0111	28	c.14- others(47): Show c.14-152298_14-152297insATATATATATATATATATATATATAT AT	FGF12	ENSG00000114279.15	transcript	ENST00000445105.7	protein_coding	2/5			chr3	TogoVar
FGF12_chr3_192134390_192732541	192512859	T T	TATATATA others(21): Show TATATATATATATATATATATATATATAA	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0044 a0001c0001t0002g0044	1	90	0.0111	28	c.14- others(47): Show c.14-152322_14-152321insTTATATATATATATATATATATATAT AT	FGF12	ENSG00000114279.15	transcript	ENST00000445105.7	protein_coding	2/5			chr3	TogoVar
FGF12_chr3_192134390_192732541	192537950	C C	CTTTTTTT others(21): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0033 a0001c0001t0033	a0001c0001t0033g0011 a0001c0001t0033g0011	1	90	0.0111	28	c.14- others(47): Show c.14-177413_14-177412insAAAAAAAAAAAAAAAAAAAAAAAAAA AA	FGF12	ENSG00000114279.15	transcript	ENST00000445105.7	protein_coding	2/5			chr3	TogoVar
FGF14_chr13_101705804_101921945	101816269	C C	CAAAAAAA others(21): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18964.hp1 NA19060.hp2 NA18964.hp1 NA19060.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0044 a0001c0001t0006 a0001c0001t0044	a0001c0001t0006g0073 a0001c0001t0044g0178 a0001c0001t0006g0073 a0001c0001t0044g0178	2	266	0.0075	28	c.408 others(47): Show c.408+52455_408+52456insTTTTTTTTTTTTTTTTTTTTTTTTTT TT	FGF14	ENSG00000102466.17	transcript	ENST00000376143.5	protein_coding	3/4			chr13	TogoVar
FGF18_chr5_171414647_171462626	171461605	T T	TTTTCTTT others(21): Show TTTTCTTTCTTTCTTTCTTTCTTTCTTTC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02027.hp2 HG02056.hp2 HG02132.hp2 others(2): Show HG02027.hp2 HG02056.hp2 HG02132.hp2 NA18942.hp2 NA18993.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0256 a0001c0002t0001g0172 a0001c0002t0001g0203 others(2): Show a0001c0001t0001g0256 a0001c0002t0001g0172 a0001c0002t0001g0203 a0001c0002t0001g0213 a0001c0002t0001g0342	5	388	0.0129	28	c.48 others(39): Show c.4800_*4801insTTTCTTTCTTTCTTTCTTTCTTTCTTTC	FGF18	ENSG00000156427.8	transcript	ENST00000274625.6	protein_coding		3980		chr5	TogoVar
FGF18_chr5_171414647_171462626	171461629	C C	CTTTCTTT others(21): Show CTTTCTTTCTTTCTTTCTTTCTTTCTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01346.hp2 HG02055.hp2 HG02572.hp2 others(6): Show HG01346.hp2 HG02055.hp2 HG02572.hp2 HG03579.hp1 HG03579.hp2 HG03831.hp1 HG04204.hp2 NA18964.hp2 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0005 a0001c0001t0001g0021 a0001c0001t0001g0132 others(5): Show a0001c0001t0001g0005 a0001c0001t0001g0021 a0001c0001t0001g0132 a0001c0001t0001g0187 a0001c0001t0001g0252 a0001c0001t0001g0295 a0001c0001t0001g0351 a0001c0001t0002g0210	9	388	0.0232	28	c.48 others(39): Show c.4824_*4825insTTTCTTTCTTTCTTTCTTTCTTTCTTTT	FGF18	ENSG00000156427.8	transcript	ENST00000274625.6	protein_coding		4004		chr5	TogoVar
FGF2_chr4_122821831_122903236	122844582	T T	TCTTCCTT others(21): Show TCTTCCTTCCTTCCTTCCTTCCTTCCTTC	intron_variant intron_variant	MODIFIER	HG03540.hp2 HG03704.hp1 HG03540.hp2 HG03704.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0007 a0001c0001t0002 a0001c0001t0007	a0001c0001t0002g0177 a0001c0001t0007g0178 a0001c0001t0002g0177 a0001c0001t0007g0178	2	256	0.0078	28	c.178 others(47): Show c.178+17233_178+17234insCCTTCCTTCCTTCCTTCCTTCCTTCC TT	FGF2	ENSG00000138685.18	transcript	ENST00000644866.2	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr4	TogoVar
FGF2_chr4_122821831_122903236	122844586	T T	TCTTCCTT others(21): Show TCTTCCTTCCTTCCTTCCTTCCTTCCTTC	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG03471.hp1 HG02818.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0194 a0001c0001t0004g0195 a0001c0001t0004g0194 a0001c0001t0004g0195	2	256	0.0078	28	c.178 others(47): Show c.178+17238_178+17265dupCCTTCCTTCCTTCCTTCCTTCCTTCC TT	FGF2	ENSG00000138685.18	transcript	ENST00000644866.2	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr4	TogoVar
FGF2_chr4_122821831_122903236	122899044	A A	ATTTTTTT others(21): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01071.hp2 HG03834.hp2 HG01071.hp2 HG03834.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0047 a0001c0001t0002g0158 a0001c0001t0002g0047 a0001c0001t0002g0158	2	256	0.0078	28	c.66 others(39): Show c.6648_*6649insTTTTTTTTTTTTTTTTTTTTTTTTTTTT	FGF2	ENSG00000138685.18	transcript	ENST00000644866.2	protein_coding		809		chr4	TogoVar
FGF3_chr11_69804968_69824416	69813772	A A	ATGGGTGG others(21): Show ATGGGTGGATGGCTGGTTGGCTGGATGGG	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG03098.hp1 HG06807.hp1 HG02615.hp1 HG03098.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0036 a0001c0001t0001g0106 a0001c0001t0001g0036 a0001c0001t0001g0106	3	422	0.0071	28	c.324 others(45): Show c.324+2547_324+2548insCCCATCCAGCCAACCAGCCATCCACCCA	FGF3	ENSG00000186895.4	transcript	ENST00000334134.4	protein_coding	2/2			chr11	TogoVar
FGF5_chr4_80261664_80296017	80267733	G G	GTAGATAA others(21): Show GTAGATAAATAGATAGATAGATAGATAGA	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01243.hp1 HG02145.hp1 others(11): Show HG01167.hp1 HG01243.hp1 HG02145.hp1 HG02630.hp1 HG02630.hp2 HG02723.hp2 HG02809.hp2 HG02895.hp1 HG03139.hp1 HG03453.hp2 HG03471.hp2 HG03540.hp1 HG03579.hp2 NA19030.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0008 a0002c0002t0009 a0002c0002t0014 others(7): Show a0002c0002t0008 a0002c0002t0009 a0002c0002t0014 a0002c0002t0015 a0002c0002t0034 a0002c0002t0081 a0002c0002t0083 a0002c0002t0084 a0002c0002t0085 a0002c0002t0090	a0002c0002t0008g0010 a0002c0002t0008g0018 a0002c0002t0008g0074 others(9): Show a0002c0002t0008g0010 a0002c0002t0008g0018 a0002c0002t0008g0074 a0002c0002t0009g0071 a0002c0002t0014g0018 a0002c0002t0015g0018 a0002c0002t0034g0010 a0002c0002t0081g0010 a0002c0002t0083g0010 a0002c0002t0084g0073 a0002c0002t0085g0072 a0002c0002t0090g0018	14	456	0.0307	28	c.355 others(43): Show c.355+560_355+561insAATAGATAGATAGATAGATAGATAGATA	FGF5	ENSG00000138675.17	transcript	ENST00000312465.12	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr4	TogoVar
FGF7_chr15_49418242_49493775	49422118	C C	CAGAGAGA others(21): Show CAGAGAGAGAGAGAGAGAGAGAGAGAGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02040.hp2 HG03831.hp2 NA18951.hp2 others(1): Show HG02040.hp2 HG03831.hp2 NA18951.hp2 NA18966.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0010 a0001c0001t0008 a0001c0001t0010	a0001c0001t0008g0040 a0001c0001t0008g0292 a0001c0001t0010g0294 a0001c0001t0008g0040 a0001c0001t0008g0292 a0001c0001t0010g0294	4	358	0.0112	28	c.-15 others(39): Show c.-1589_-1588insAGAGAGAGAGAGAGAGAGAGAGAGAGAG	FGF7	ENSG00000140285.12	transcript	ENST00000267843.9	protein_coding		1123		chr15	TogoVar
FGF7_chr15_49418242_49493775	49422120	T T	TAGAGAGA others(21): Show TAGAGAGAGAGAGAGAGAGAGAGAGAGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0090 a0001c0001t0014g0090	1	358	0.0028	28	c.-15 others(39): Show c.-1587_-1586insAGAGAGAGAGAGAGAGAGAGAGAGAGAG	FGF7	ENSG00000140285.12	transcript	ENST00000267843.9	protein_coding		1121		chr15	TogoVar
FGFR2_chr10_121473332_121603444	121577158	A A	AAAAAAAA others(21): Show AAAAAAAAAAAATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18981.hp2 NA18981.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0150 a0001c0001t0003g0150	1	240	0.0042	28	c.110 others(47): Show c.110-11455_110-11454insATATATATATATATATATTTTTTTTT TT	FGFR2	ENSG00000066468.24	transcript	ENST00000358487.10	protein_coding	2/17			chr10	TogoVar
FGFR2_chr10_121473332_121603444	121577178	T T	TATAGAGA others(21): Show TATAGAGAGAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02738.hp2 HG02738.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0100 a0001c0001t0002g0100	1	240	0.0042	28	c.110 others(47): Show c.110-11475_110-11474insCTCTCTCTCTCTCTCTCTCTCTCTCT AT	FGFR2	ENSG00000066468.24	transcript	ENST00000358487.10	protein_coding	2/17			chr10	TogoVar
FGFR2_chr10_121473332_121603444	121577178	T T	TATATAGA others(21): Show TATATAGAGAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG02129.hp1 HG02886.hp1 others(1): Show HG01192.hp1 HG02129.hp1 HG02886.hp1 HG04115.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0002 a0001c0001t0004	a0001c0001t0002g0017 a0001c0001t0002g0061 a0001c0001t0002g0071 others(1): Show a0001c0001t0002g0017 a0001c0001t0002g0061 a0001c0001t0002g0071 a0001c0001t0004g0198	4	240	0.0167	28	c.110 others(47): Show c.110-11475_110-11474insCTCTCTCTCTCTCTCTCTCTCTCTAT AT	FGFR2	ENSG00000066468.24	transcript	ENST00000358487.10	protein_coding	2/17			chr10	TogoVar
FGFR2_chr10_121473332_121603444	121577178	T T	TATATATA others(21): Show TATATATAGAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02895.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0003 a0002c0003t0003	a0002c0003t0003g0122 a0002c0003t0003g0122	1	240	0.0042	28	c.110 others(47): Show c.110-11475_110-11474insCTCTCTCTCTCTCTCTCTCTCTATAT AT	FGFR2	ENSG00000066468.24	transcript	ENST00000358487.10	protein_coding	2/17			chr10	TogoVar
FGFR2_chr10_121473332_121603444	121577178	T T	TATATATA others(21): Show TATATATATATATATATAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02897.hp1 HG02897.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0003 a0002c0003t0003	a0002c0003t0003g0162 a0002c0003t0003g0162	1	240	0.0042	28	c.110 others(47): Show c.110-11475_110-11474insCTCTCTCTCTCTATATATATATATAT AT	FGFR2	ENSG00000066468.24	transcript	ENST00000358487.10	protein_coding	2/17			chr10	TogoVar
FGFR2_chr10_121473332_121603444	121577187	A A	AGAGAGAG others(21): Show AGAGAGAGAGAGAGAGAGAGAGAGAGAGG	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01243.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0026 a0002c0003t0026	a0002c0003t0026g0238 a0002c0003t0026g0238	1	240	0.0042	28	c.110 others(47): Show c.110-11484_110-11483insCCTCTCTCTCTCTCTCTCTCTCTCTC TC	FGFR2	ENSG00000066468.24	transcript	ENST00000358487.10	protein_coding	2/17			chr10	TogoVar
FGFRL1_chr4_1006626_1031898	1009771	C C	CCCAGGCC others(21): Show CCCAGGCCCGGGCCCCGGCCCCGCCCCCG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01891.hp2 HG02622.hp1 HG01891.hp2 HG02622.hp1	a0001 a0001	a0001c0010 a0001c0010	a0001c0010t0023 a0001c0010t0035 a0001c0010t0023 a0001c0010t0035	a0001c0010t0023g0126 a0001c0010t0035g0129 a0001c0010t0023g0126 a0001c0010t0035g0129	2	414	0.0048	28	c.-22 others(39): Show c.-2200_-2199insCCAGGCCCGGGCCCCGGCCCCGCCCCCG	FGFRL1	ENSG00000127418.15	transcript	ENST00000510644.6	protein_coding		1854		chr4	TogoVar
FGGY_chr1_59292094_59767730	59491040	T T	TTTCCTTT others(21): Show TTTCCTTTCCTTTCCTTCCCTCCCCTCCC	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02257.hp1 HG02897.hp2 others(1): Show HG01891.hp2 HG02257.hp1 HG02897.hp2 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0003 a0001c0001t0001 a0001c0003t0003	a0001c0001t0001g0045 a0001c0003t0003g0014 a0001c0003t0003g0016 others(1): Show a0001c0001t0001g0045 a0001c0003t0003g0014 a0001c0003t0003g0016 a0001c0003t0003g0017	4	166	0.0241	28	c.671 others(47): Show c.671-21270_671-21269insTCCTTTCCTTTCCTTCCCTCCCCTCC CT	FGGY	ENSG00000172456.18	transcript	ENST00000303721.12	protein_coding	6/15		INFO_REALIGN_3_PRIME	chr1	TogoVar
FGL1_chr8_17859389_17900524	17875533	T T	TTCTTTCT others(21): Show TTCTTTCTTTCTCTCTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0001 a0004c0004t0001	a0004c0004t0001g0048 a0004c0004t0001g0048	1	366	0.0027	28	c.245 others(45): Show c.245-1013_245-1012insGAGAGAGAGAGAGAGAGAGAAAGAAAGA	FGL1	ENSG00000104760.17	transcript	ENST00000427924.5	protein_coding	3/7			chr8	TogoVar
FGL1_chr8_17859389_17900524	17875535	C C	CTTTCTCT others(21): Show CTTTCTCTTTCTTTCTTTCTTTCTTTCTT	intron_variant intron_variant	MODIFIER	NA18964.hp1 NA18964.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0074 a0002c0002t0001g0074	1	366	0.0027	28	c.245 others(45): Show c.245-1015_245-1014insAAGAAAGAAAGAAAGAAAGAAAGAGAAA	FGL1	ENSG00000104760.17	transcript	ENST00000427924.5	protein_coding	3/7			chr8	TogoVar
FGL1_chr8_17859389_17900524	17875535	C C	CTTTCTTT others(21): Show CTTTCTTTCTTTCTTTCTTTCTCTTTCTT	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0001 a0004c0004t0001	a0004c0004t0001g0270 a0004c0004t0001g0270	1	366	0.0027	28	c.245 others(45): Show c.245-1015_245-1014insAAGAAAGAGAAAGAAAGAAAGAAAGAAA	FGL1	ENSG00000104760.17	transcript	ENST00000427924.5	protein_coding	3/7			chr8	TogoVar
FGL1_chr8_17859389_17900524	17875535	C C	CTTTCTTT others(21): Show CTTTCTTTCTTTCTTTCTTTCTTCTTTCT	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01106.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0160 a0002c0002t0001g0160	1	366	0.0027	28	c.245 others(45): Show c.245-1015_245-1014insAGAAAGAAGAAAGAAAGAAAGAAAGAAA	FGL1	ENSG00000104760.17	transcript	ENST00000427924.5	protein_coding	3/7			chr8	TogoVar
FGL1_chr8_17859389_17900524	17875535	C C	CTTTCTTT others(21): Show CTTTCTTTCTTTCTTTCTTTCTTTCTCTT	intron_variant intron_variant	MODIFIER	HG01516.hp1 HG02698.hp1 HG01516.hp1 HG02698.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0075 a0002c0002t0001g0110 a0002c0002t0001g0075 a0002c0002t0001g0110	2	366	0.0055	28	c.245 others(45): Show c.245-1015_245-1014insAAGAGAAAGAAAGAAAGAAAGAAAGAAA	FGL1	ENSG00000104760.17	transcript	ENST00000427924.5	protein_coding	3/7			chr8	TogoVar
FHAD1_chr1_15242223_15403328	15389447	C C	CAAAAAAA others(21): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02523.hp2 NA18612.hp2 others(4): Show HG02055.hp1 HG02523.hp2 NA18612.hp2 NA18943.hp1 NA18956.hp2 NA18984.hp1 NA19056.hp2	a0002 a0006 a0002 a0006	a0002c0003 a0002c0007 a0002c0019 others(1): Show a0002c0003 a0002c0007 a0002c0019 a0006c0014	a0002c0003t0006 a0002c0003t0014 a0002c0007t0003 others(2): Show a0002c0003t0006 a0002c0003t0014 a0002c0007t0003 a0002c0019t0006 a0006c0014t0003	a0002c0003t0006g0064 a0002c0003t0006g0069 a0002c0003t0006g0089 others(4): Show a0002c0003t0006g0064 a0002c0003t0006g0069 a0002c0003t0006g0089 a0002c0003t0014g0151 a0002c0007t0003g0186 a0002c0019t0006g0066 a0006c0014t0003g0214	7	294	0.0238	28	c.426 others(47): Show c.4269+1337_4269+1338insAAAAAAAAAAAAAAAAAAAAAAAAAA AA	FHAD1	ENSG00000142621.21	transcript	ENST00000688493.1	protein_coding	32/33		INFO_REALIGN_3_PRIME	chr1	TogoVar
FHIP1A_chr4_151404176_151675503	151445849	A A	AATATATA others(21): Show AATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG02083.hp1 NA18947.hp2 HG01106.hp1 HG02083.hp1 NA18947.hp2	a0001 a0010 a0001 a0010	a0001c0002 a0010c0018 a0001c0002 a0010c0018	a0001c0002t0002 a0010c0018t0002 a0001c0002t0002 a0010c0018t0002	a0001c0002t0002g0046 a0001c0002t0002g0049 a0010c0018t0002g0053 a0001c0002t0002g0046 a0001c0002t0002g0049 a0010c0018t0002g0053	3	252	0.0119	28	c.-35 others(47): Show c.-355-8828_-355-8827insATATATATATATATATATATATATAT AT	FHIP1A	ENSG00000164142.16	transcript	ENST00000435205.6	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr4	TogoVar
FHIP1A_chr4_151404176_151675503	151452955	T T	TATATATA others(21): Show TATATATATATATATATATATATACATAC	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0060 a0001c0001t0060	a0001c0001t0060g0008 a0001c0001t0060g0008	1	252	0.0040	28	c.-35 others(47): Show c.-355-1745_-355-1744insTATATATATATATATATATATACATA CA	FHIP1A	ENSG00000164142.16	transcript	ENST00000435205.6	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr4	TogoVar
FHIP1A_chr4_151404176_151675503	151518635	T T	TTCCCTCC others(21): Show TTCCCTCCCTCCCTCCCTCCCTCCCTCCC	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02895.hp2 HG02897.hp2 others(2): Show HG02572.hp1 HG02895.hp2 HG02897.hp2 HG03098.hp1 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0022 a0001c0001t0040 a0001c0005t0017 a0001c0001t0022 a0001c0001t0040 a0001c0005t0017	a0001c0001t0022g0006 a0001c0001t0040g0009 a0001c0005t0017g0247 others(2): Show a0001c0001t0022g0006 a0001c0001t0040g0009 a0001c0005t0017g0247 a0001c0005t0017g0248 a0001c0005t0017g0249	5	252	0.0198	28	c.-12 others(49): Show c.-123+35989_-123+36016dupCCCTCCCTCCCTCCCTCCCTCCCT CCCT	FHIP1A	ENSG00000164142.16	transcript	ENST00000435205.6	protein_coding	3/13		INFO_REALIGN_3_PRIME	chr4	TogoVar

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