Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
FHIP1A_chr4_151404176_151675503	151518661	C C	CCCTCCCT others(21): Show CCCTCCCTCCCTCCCTCCCTCCCTCCCTT	intron_variant intron_variant	MODIFIER	HG04115.hp1 HG04115.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0095 a0001c0002t0002g0095	1	252	0.0040	28	c.-12 others(49): Show c.-123+36016_-123+36017insCCCTCCCTCCCTCCCTCCCTCCCT TCCT	FHIP1A	ENSG00000164142.16	transcript	ENST00000435205.6	protein_coding	3/13		INFO_REALIGN_3_PRIME	chr4	TogoVar
FHIP2B_chr8_22084150_22109911	22106419	C C	CAAAAAAA others(21): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp1 HG00280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0023 a0001c0001t0002g0023	1	394	0.0025	28	c.34 others(39): Show c.3488_*3489insAAAAAAAAAAAAAAAAAAAAAAAAAAAA	FHIP2B	ENSG00000158863.22	transcript	ENST00000289921.8	protein_coding		1509		chr8	TogoVar
FHIT_chr3_59742277_61256452	59986540	T T	TATATATA others(21): Show TATATATATATACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02280.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0017 a0001c0001t0014g0017	1	46	0.0217	28	c.279 others(47): Show c.279+24830_279+24831insGTGTGTGTGTGTGTGTGTATATATAT AT	FHIT	ENSG00000189283.11	transcript	ENST00000492590.6	protein_coding	7/9			chr3	TogoVar
FHIT_chr3_59742277_61256452	59986540	T T	TATATATA others(21): Show TATATATATATATACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0004 a0001c0001t0011g0004	1	46	0.0217	28	c.279 others(47): Show c.279+24830_279+24831insGTGTGTGTGTGTGTGTATATATATAT AT	FHIT	ENSG00000189283.11	transcript	ENST00000492590.6	protein_coding	7/9			chr3	TogoVar
FHIT_chr3_59742277_61256452	60014992	C C	CTATACAC others(21): Show CTATACACACATGTATGCACACATGTGTA	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0005 a0002c0004t0005	a0002c0004t0005g0014 a0002c0004t0005g0014	1	46	0.0217	28	c.104 others(43): Show c.104-868_104-841dupTACACATGTGTGCATACATGTGTGTATA	FHIT	ENSG00000189283.11	transcript	ENST00000492590.6	protein_coding	5/9			chr3	TogoVar
FHIT_chr3_59742277_61256452	60029897	C C	CTGTGTGT others(21): Show CTGTGTGTGTCTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0027 a0001c0001t0002g0027	1	46	0.0217	28	c.104 others(47): Show c.104-15746_104-15745insCACACACACACACACACAGACACACA CA	FHIT	ENSG00000189283.11	transcript	ENST00000492590.6	protein_coding	5/9			chr3	TogoVar
FHIT_chr3_59742277_61256452	60195553	A A	ATATATAT others(21): Show ATATATATATATATATATATATATATATT	intron_variant intron_variant	MODIFIER	HG01071.hp2 HG02622.hp1 HG02723.hp2 HG01071.hp2 HG02622.hp1 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0002t0004 a0001c0001t0001 a0001c0001t0003 a0001c0002t0004	a0001c0001t0001g0035 a0001c0001t0003g0026 a0001c0002t0004g0033 a0001c0001t0001g0035 a0001c0001t0003g0026 a0001c0002t0004g0033	3	46	0.0652	28	c.104 others(49): Show c.104-181402_104-181401insAATATATATATATATATATATATA TATA	FHIT	ENSG00000189283.11	transcript	ENST00000492590.6	protein_coding	5/9			chr3	TogoVar
FHIT_chr3_59742277_61256452	60441794	A A	ACACACAC others(21): Show ACACACACATATATGTATATGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0029 a0001c0001t0001g0029	1	46	0.0217	28	c.103 others(47): Show c.103+95065_103+95066insCACACACACATATACATATATGTGTG TG	FHIT	ENSG00000189283.11	transcript	ENST00000492590.6	protein_coding	5/9			chr3	TogoVar
FHIT_chr3_59742277_61256452	61183318	G G	GTGAATGA others(21): Show GTGAATGAATGAATGAATGAATGAATGAA	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG06807.hp1 NA18906.hp2 HG03225.hp2 HG06807.hp1 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0001c0001t0002 a0001c0001t0003 a0001c0001t0008	a0001c0001t0002g0015 a0001c0001t0003g0016 a0001c0001t0008g0036 a0001c0001t0002g0015 a0001c0001t0003g0016 a0001c0001t0008g0036	3	46	0.0652	28	c.-16 others(49): Show c.-164+17298_-164+17299insTTCATTCATTCATTCATTCATTCA TTCA	FHIT	ENSG00000189283.11	transcript	ENST00000492590.6	protein_coding	2/9			chr3	TogoVar
FHIT_chr3_59742277_61256452	61239762	C C	CATATATA others(21): Show CATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02723.hp2 NA19043.hp2 HG02723.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0001 a0001c0001t0003g0026 a0001c0001t0001g0001 a0001c0001t0003g0026	2	46	0.0435	28	c.-21 others(49): Show c.-213+11538_-213+11539insATATATATATATATATATATATAT ATAT	FHIT	ENSG00000189283.11	transcript	ENST00000492590.6	protein_coding	1/9			chr3	TogoVar
FHIT_chr3_59742277_61256452	61239776	T T	TATATATA others(21): Show TATATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0037 a0001c0001t0002g0037	1	46	0.0217	28	c.-21 others(49): Show c.-213+11524_-213+11525insGTATATATATATATATATATATAT ATAT	FHIT	ENSG00000189283.11	transcript	ENST00000492590.6	protein_coding	1/9			chr3	TogoVar
FH_chr1_241492603_241524755	241498694	C C	CATATATA others(21): Show CATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01952.hp2 HG02738.hp2 NA18955.hp2 others(3): Show HG01952.hp2 HG02738.hp2 NA18955.hp2 NA18972.hp2 NA18994.hp2 NA18998.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0058 a0001c0001t0001g0065 a0001c0001t0001g0161 others(3): Show a0001c0001t0001g0058 a0001c0001t0001g0065 a0001c0001t0001g0161 a0001c0001t0001g0176 a0001c0001t0001g0237 a0001c0001t0001g0285	6	406	0.0148	28	c.139 others(45): Show c.1391-752_1391-725dupATATATATATATATATATATATATATAT	FH	ENSG00000091483.8	transcript	ENST00000366560.4	protein_coding	9/9			chr1	TogoVar
FIG4_chr6_109686296_109830426	109707372	T T	TATACATA others(21): Show TATACATATATACACATATGTATACATAC	intron_variant intron_variant	MODIFIER	HG02970.hp1 NA21309.hp2 HG02970.hp1 NA21309.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0203 a0002c0002t0004g0204 a0002c0002t0004g0203 a0002c0002t0004g0204	2	370	0.0054	28	c.67- others(43): Show c.67-7703_67-7702insCATATATACACATATGTATACATACATA	FIG4	ENSG00000112367.12	transcript	ENST00000230124.8	protein_coding	1/22		INFO_REALIGN_3_PRIME	chr6	TogoVar
FILIP1L_chr3_99823811_100119501	99983462	G G	GTATATAT others(21): Show GTATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01975.hp1 HG01975.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0160 a0002c0002t0002g0160	1	258	0.0039	28	c.-10 others(47): Show c.-10-52433_-10-52432insTATATATATATATATATATATATATA TA	FILIP1L	ENSG00000168386.19	transcript	ENST00000477258.2	protein_coding	1/5			chr3	TogoVar
FITM2_chr20_44297840_44316202	44315912	C C	CTTTTTTT others(21): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0021 a0001c0001t0015g0021	1	424	0.0024	28	c.-47 others(39): Show c.-4765_-4764insAAAAAAAAAAAAAAAAAAAAAAAAAAAA	FITM2	ENSG00000197296.6	transcript	ENST00000396825.4	protein_coding		4711		chr20	TogoVar
FKBP2_chr11_64236095_64249132	64245648	C C	CCCCACCT others(21): Show CCCCACCTGTCAGCTGTCAGCTTATCATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0012 a0001c0001t0001g0012	1	332	0.0030	28	c.16 others(39): Show c.1619_*1620insCCCACCTGTCAGCTGTCAGCTTATCATA	FKBP2	ENSG00000173486.14	transcript	ENST00000309366.9	protein_coding		1517		chr11	TogoVar
FKBP9_chr7_32952440_33011928	32977870	C C	CATGTATA others(21): Show CATGTATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0024 a0001c0001t0024	a0001c0001t0024g0375 a0001c0001t0024g0375	1	430	0.0023	28	c.703 others(45): Show c.703+1373_703+1374insGTATATATATATATATATATATATATAT	FKBP9	ENSG00000122642.11	transcript	ENST00000242209.9	protein_coding	4/9		INFO_REALIGN_3_PRIME	chr7	TogoVar
FKBP9_chr7_32952440_33011928	32996606	T T	TTTCCTTC others(21): Show TTTCCTTCCTTCCTTCCTTCCTTCCTTCC	intron_variant intron_variant	MODIFIER	HG01515.hp1 HG01517.hp2 HG01515.hp1 HG01517.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0331 a0001c0001t0002g0342 a0001c0001t0002g0331 a0001c0001t0002g0342	2	430	0.0047	28	c.122 others(45): Show c.1226+284_1226+311dupCCTTCCTTCCTTCCTTCCTTCCTTCCTT	FKBP9	ENSG00000122642.11	transcript	ENST00000242209.9	protein_coding	7/9		INFO_REALIGN_3_PRIME	chr7	TogoVar
FLACC1_chr2_201283271_201362345	201309925	A A	AAAAAAAA others(21): Show AAAAAAAAAAAAAAAAAAAAAAAAAAAAG	intron_variant intron_variant	MODIFIER	NA19063.hp1 NA19063.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0053 a0001c0001t0001g0053	1	370	0.0027	28	c.676 others(43): Show c.676-676_676-675insCTTTTTTTTTTTTTTTTTTTTTTTTTTT	FLACC1	ENSG00000155749.13	transcript	ENST00000392257.8	protein_coding	9/14			chr2	TogoVar
FLACC1_chr2_201283271_201362345	201323784	C C	CAAAAAAA others(21): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0005 a0003c0004t0005	a0003c0004t0005g0311 a0003c0004t0005g0311	1	370	0.0027	28	c.675 others(45): Show c.675+6685_675+6686insTTTTTTTTTTTTTTTTTTTTTTTTTTTT	FLACC1	ENSG00000155749.13	transcript	ENST00000392257.8	protein_coding	9/14			chr2	TogoVar
FLI1_chr11_128689072_128818267	128757044	T T	TTTTCTTT others(21): Show TTTTCTTTCTTTCTTTCTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG00735.hp2 NA18947.hp2 HG00735.hp2 NA18947.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0137 a0001c0001t0001g0145 a0001c0001t0001g0137 a0001c0001t0001g0145	2	328	0.0061	28	c.19- others(43): Show c.19-1029_19-1002dupTTCTTTCTTTCTTTCTTTCTTTCTTTCT	FLI1	ENSG00000151702.18	transcript	ENST00000527786.7	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr11	TogoVar
FLNB_chr3_58003422_58177251	58100373	A A	AAAAAAAA others(21): Show AAAAAAAAAATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0005 a0005	a0005c0048 a0005c0048	a0005c0048t0005 a0005c0048t0005	a0005c0048t0005g0001 a0005c0048t0005g0001	1	180	0.0056	28	c.134 others(47): Show c.1345+1466_1345+1467insAAAAAAAATATATATATATATATATA TA	FLNB	ENSG00000136068.16	transcript	ENST00000295956.9	protein_coding	8/45		INFO_REALIGN_3_PRIME	chr3	TogoVar
FLNB_chr3_58003422_58177251	58100373	A A	AAAATATA others(21): Show AAAATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0026 a0026	a0026c0038 a0026c0038	a0026c0038t0002 a0026c0038t0002	a0026c0038t0002g0158 a0026c0038t0002g0158	1	180	0.0056	28	c.134 others(47): Show c.1345+1466_1345+1467insAATATATATATATATATATATATATA TA	FLNB	ENSG00000136068.16	transcript	ENST00000295956.9	protein_coding	8/45		INFO_REALIGN_3_PRIME	chr3	TogoVar
FLNB_chr3_58003422_58177251	58100373	A A	AATATATA others(21): Show AATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG00738.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0140 a0002c0003t0002g0140	1	180	0.0056	28	c.134 others(47): Show c.1345+1477_1345+1478insATATATATATATATATATATATATAT AT	FLNB	ENSG00000136068.16	transcript	ENST00000295956.9	protein_coding	8/45		INFO_REALIGN_3_PRIME	chr3	TogoVar
FLOT1_chr6_30722709_30747687	30737246	G G	GTCCGTCC others(21): Show GTCCGTCCGTCCATCCATCCATCCATCCA	intron_variant intron_variant	MODIFIER	HG01361.hp2 HG01361.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0226 a0001c0001t0001g0226	1	441	0.0023	28	c.723 others(45): Show c.723+2911_723+2912insTGGATGGATGGATGGATGGACGGACGGA	FLOT1	ENSG00000137312.15	transcript	ENST00000376389.8	protein_coding	8/12			chr6	TogoVar
FLOT1_chr6_30722709_30747687	30737246	G G	GTCCGTCC others(21): Show GTCCGTCCGTCCGTCCATCCATCCATCCA	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00642.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0223 a0001c0001t0001g0223	1	441	0.0023	28	c.723 others(45): Show c.723+2911_723+2912insTGGATGGATGGATGGACGGACGGACGGA	FLOT1	ENSG00000137312.15	transcript	ENST00000376389.8	protein_coding	8/12			chr6	TogoVar
FLRT2_chr14_85525144_85659428	85631110	T T	TTATATAT others(21): Show TTATATATATATATATATATATATATATA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00733.hp2 HG00733.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0042 a0001c0001t0042	a0001c0001t0042g0243 a0001c0001t0042g0243	1	338	0.0030	28	c.76 others(39): Show c.7614_*7615insATATATATATATATATATATATATATAT	FLRT2	ENSG00000185070.12	transcript	ENST00000330753.6	protein_coding	2/2	7615	INFO_REALIGN_3_PRIME	chr14	TogoVar
FLRT2_chr14_85525144_85659428	85631112	T T	TTATATAT others(21): Show TTATATATATATATATATATATATATATA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01081.hp1 HG01123.hp1 HG01175.hp1 others(13): Show HG01081.hp1 HG01123.hp1 HG01175.hp1 HG01975.hp1 HG02559.hp2 HG02630.hp1 HG03239.hp1 HG04228.hp1 NA18954.hp1 NA18960.hp1 NA18971.hp2 NA18991.hp2 NA19012.hp2 NA19240.hp1 NA20752.hp2 NA21309.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0002 a0002c0006 others(1): Show a0001c0001 a0002c0002 a0002c0006 a0004c0010	a0001c0001t0077 a0001c0001t0078 a0001c0001t0079 others(13): Show a0001c0001t0077 a0001c0001t0078 a0001c0001t0079 a0001c0001t0080 a0001c0001t0081 a0001c0001t0082 a0001c0001t0130 a0001c0001t0195 a0001c0001t0246 a0001c0001t0270 a0001c0001t0304 a0002c0002t0131 a0002c0002t0132 a0002c0002t0134 a0002c0006t0133 a0004c0010t0104	a0001c0001t0077g0028 a0001c0001t0078g0212 a0001c0001t0079g0240 others(13): Show a0001c0001t0077g0028 a0001c0001t0078g0212 a0001c0001t0079g0240 a0001c0001t0080g0204 a0001c0001t0081g0331 a0001c0001t0082g0319 a0001c0001t0130g0095 a0001c0001t0195g0248 a0001c0001t0246g0242 a0001c0001t0270g0140 a0001c0001t0304g0177 a0002c0002t0131g0267 a0002c0002t0132g0266 a0002c0002t0134g0036 a0002c0006t0133g0080 a0004c0010t0104g0051	16	338	0.0473	28	c.76 others(39): Show c.7632_*7633insATATATATATATATATATATATATATAT	FLRT2	ENSG00000185070.12	transcript	ENST00000330753.6	protein_coding	2/2	7633	INFO_REALIGN_3_PRIME	chr14	TogoVar
FLRT3_chr20_14317985_14342612	14322175	A A	AATATATA others(21): Show AATATATATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp1 HG00544.hp1 HG00544.hp2 others(44): Show HG00280.hp1 HG00544.hp1 HG00544.hp2 HG00597.hp2 HG00621.hp1 HG00673.hp2 HG01070.hp2 HG01123.hp1 HG01168.hp1 HG01169.hp1 HG01943.hp1 HG01981.hp1 HG02040.hp1 HG02074.hp1 HG02074.hp2 HG02109.hp2 HG02451.hp2 HG02602.hp2 HG02622.hp2 HG02630.hp1 HG02896.hp1 HG02897.hp2 HG03041.hp1 HG03130.hp2 HG03239.hp1 HG03471.hp2 HG03490.hp2 HG03669.hp2 HG03942.hp1 HG04115.hp1 NA18948.hp2 NA18949.hp2 NA18950.hp2 NA18951.hp2 NA18962.hp2 NA18968.hp1 NA18974.hp1 NA18983.hp1 NA18983.hp2 NA18989.hp2 NA19005.hp2 NA19054.hp2 NA19057.hp1 NA19059.hp1 NA19062.hp2 NA19064.hp1 NA19079.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0002 a0002c0003 a0003c0004 a0001c0002 a0002c0003 a0003c0004	a0001c0002t0002 a0001c0002t0010 a0001c0002t0013 others(8): Show a0001c0002t0002 a0001c0002t0010 a0001c0002t0013 a0001c0002t0018 a0001c0002t0021 a0002c0003t0004 a0002c0003t0005 a0003c0004t0007 a0003c0004t0008 a0003c0004t0011 a0003c0004t0023	a0001c0002t0002g0005 a0001c0002t0002g0006 a0001c0002t0002g0023 others(14): Show a0001c0002t0002g0005 a0001c0002t0002g0006 a0001c0002t0002g0023 a0001c0002t0002g0024 a0001c0002t0002g0025 a0001c0002t0002g0088 a0001c0002t0010g0037 a0001c0002t0013g0012 a0001c0002t0018g0038 a0001c0002t0021g0044 a0002c0003t0004g0003 a0002c0003t0005g0004 a0002c0003t0005g0016 a0003c0004t0007g0099 a0003c0004t0008g0009 a0003c0004t0011g0097 a0003c0004t0023g0101	47	430	0.1093	28	c.33 others(39): Show c.3381_*3382insATATATATATATATATATATATATATAT	FLRT3	ENSG00000125848.10	transcript	ENST00000341420.5	protein_coding		809		chr20	TogoVar
FLT1_chr13_28295346_28500128	28372566	G G	GTATATAT others(21): Show GTATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02273.hp1 HG02273.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0143 a0001c0001t0003g0143	1	228	0.0044	28	c.211 others(49): Show c.2116+12291_2116+12318dupTATATATATATATATATATATATA TATA	FLT1	ENSG00000102755.13	transcript	ENST00000282397.9	protein_coding	14/29			chr13	TogoVar
FLT1_chr13_28295346_28500128	28412381	T T	TTTCTTTC others(21): Show TTTCTTTCTTTCTTTCCTTCTTTCTTTCC	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0019 a0001c0002t0019	a0001c0002t0019g0032 a0001c0002t0019g0032	1	228	0.0044	28	c.143 others(47): Show c.1437-6488_1437-6487insGGAAAGAAAGAAGGAAAGAAAGAAAG AA	FLT1	ENSG00000102755.13	transcript	ENST00000282397.9	protein_coding	10/29			chr13	TogoVar
FLT1_chr13_28295346_28500128	28412385	T T	TTTCTTTC others(21): Show TTTCTTTCTTTCTTTCCTTCTTTCTTTCC	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02922.hp1 HG03225.hp2 others(1): Show HG01243.hp1 HG02922.hp1 HG03225.hp2 HG03579.hp2	a0001 a0001	a0001c0002 a0001c0004 a0001c0023 a0001c0002 a0001c0004 a0001c0023	a0001c0002t0007 a0001c0002t0018 a0001c0004t0011 others(1): Show a0001c0002t0007 a0001c0002t0018 a0001c0004t0011 a0001c0023t0010	a0001c0002t0007g0021 a0001c0002t0018g0025 a0001c0004t0011g0027 others(1): Show a0001c0002t0007g0021 a0001c0002t0018g0025 a0001c0004t0011g0027 a0001c0023t0010g0033	4	228	0.0175	28	c.143 others(47): Show c.1437-6492_1437-6491insGGAAAGAAAGAAGGAAAGAAAGAAAG AA	FLT1	ENSG00000102755.13	transcript	ENST00000282397.9	protein_coding	10/29			chr13	TogoVar
FLT1_chr13_28295346_28500128	28412385	T T	TTTCTTTC others(21): Show TTTCTTTCTTTCTTTCTTTCTTTCCTTCC	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0031 a0001c0002t0001g0031	1	228	0.0044	28	c.143 others(47): Show c.1437-6492_1437-6491insGGAAGGAAAGAAAGAAAGAAAGAAAG AA	FLT1	ENSG00000102755.13	transcript	ENST00000282397.9	protein_coding	10/29			chr13	TogoVar
FLT1_chr13_28295346_28500128	28412385	T T	TTTCTTTC others(21): Show TTTCTTTCTTTCTTTCTTTCTTTCTTTCC	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0037 a0001c0002t0037	a0001c0002t0037g0106 a0001c0002t0037g0106	1	228	0.0044	28	c.143 others(47): Show c.1437-6492_1437-6491insGGAAAGAAAGAAAGAAAGAAAGAAAG AA	FLT1	ENSG00000102755.13	transcript	ENST00000282397.9	protein_coding	10/29			chr13	TogoVar
FLT1_chr13_28295346_28500128	28453017	T T	TCCCCCCC others(21): Show TCCCCCCCCCCCCCTCCCCCTCCCCCCTC	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01069.hp2	a0002 a0002	a0002c0010 a0002c0010	a0002c0010t0004 a0002c0010t0004	a0002c0010t0004g0190 a0002c0010t0004g0190	1	228	0.0044	28	c.388 others(47): Show c.388+13885_388+13886insGAGGGGGGAGGGGGAGGGGGGGGGGG GG	FLT1	ENSG00000102755.13	transcript	ENST00000282397.9	protein_coding	3/29			chr13	TogoVar
FLT1_chr13_28295346_28500128	28474505	C C	CACACACA others(21): Show CACACACACACACACACACAGACACACAG	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG01070.hp1 HG01123.hp1 others(13): Show HG00099.hp2 HG01070.hp1 HG01123.hp1 HG01258.hp2 HG01496.hp2 HG01517.hp2 HG01943.hp2 HG02273.hp2 HG02300.hp1 HG02698.hp1 HG02735.hp1 HG03017.hp2 HG03490.hp1 HG04184.hp1 HG04204.hp2 NA18980.hp2	a0001 a0004 a0007 a0001 a0004 a0007	a0001c0001 a0001c0005 a0001c0006 others(5): Show a0001c0001 a0001c0005 a0001c0006 a0001c0009 a0001c0014 a0001c0015 a0004c0016 a0007c0017	a0001c0001t0002 a0001c0005t0002 a0001c0005t0003 others(6): Show a0001c0001t0002 a0001c0005t0002 a0001c0005t0003 a0001c0006t0002 a0001c0009t0002 a0001c0014t0002 a0001c0015t0002 a0004c0016t0003 a0007c0017t0002	a0001c0001t0002g0215 a0001c0005t0002g0210 a0001c0005t0002g0212 others(13): Show a0001c0001t0002g0215 a0001c0005t0002g0210 a0001c0005t0002g0212 a0001c0005t0002g0214 a0001c0005t0002g0216 a0001c0005t0002g0218 a0001c0005t0003g0139 a0001c0006t0002g0219 a0001c0006t0002g0220 a0001c0006t0002g0221 a0001c0009t0002g0227 a0001c0009t0002g0228 a0001c0014t0002g0213 a0001c0015t0002g0222 a0004c0016t0003g0145 a0007c0017t0002g0211	16	228	0.0702	28	c.65- others(43): Show c.65-6889_65-6888insCTGTGTGTCTGTGTGTGTGTGTGTGTGT	FLT1	ENSG00000102755.13	transcript	ENST00000282397.9	protein_coding	1/29			chr13	TogoVar
FLT1_chr13_28295346_28500128	28474507	C C	CACACACA others(21): Show CACACACACACACACACACAGACACACAG	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG02145.hp1 HG02630.hp1 others(4): Show HG00639.hp1 HG02145.hp1 HG02630.hp1 HG02809.hp2 HG02970.hp2 HG03041.hp1 HG03540.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0004 others(2): Show a0001c0002 a0001c0003 a0001c0004 a0001c0007 a0001c0019	a0001c0002t0001 a0001c0002t0011 a0001c0003t0001 others(3): Show a0001c0002t0001 a0001c0002t0011 a0001c0003t0001 a0001c0004t0028 a0001c0007t0032 a0001c0019t0001	a0001c0002t0001g0050 a0001c0002t0011g0129 a0001c0002t0011g0205 others(4): Show a0001c0002t0001g0050 a0001c0002t0011g0129 a0001c0002t0011g0205 a0001c0003t0001g0051 a0001c0004t0028g0009 a0001c0007t0032g0206 a0001c0019t0001g0046	7	228	0.0307	28	c.65- others(43): Show c.65-6891_65-6890insCTGTGTGTCTGTGTGTGTGTGTGTGTGT	FLT1	ENSG00000102755.13	transcript	ENST00000282397.9	protein_coding	1/29			chr13	TogoVar
FLT3_chr13_27998274_28105576	27999213	C C	CATATATA others(21): Show CATATATATATTTATATTTATGTATATAA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0002	a0003c0003t0002g0226 a0003c0003t0002g0226	1	292	0.0034	28	c.48 others(39): Show c.4838_*4839insTTATATACATAAATATAAATATATATAT	FLT3	ENSG00000122025.15	transcript	ENST00000241453.12	protein_coding		4060		chr13	TogoVar
FLT3_chr13_27998274_28105576	28011656	T T	TTTCCTTC others(21): Show TTTCCTTCCTTCCTTCCTTCCTTCCTTCC	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00140.hp2 others(49): Show HG00099.hp1 HG00140.hp1 HG00140.hp2 HG00323.hp1 HG00639.hp2 HG00673.hp2 HG00735.hp1 HG00741.hp2 HG01069.hp2 HG01175.hp1 HG01358.hp1 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG02015.hp2 HG02056.hp2 HG02080.hp2 HG02129.hp1 HG02165.hp1 HG02559.hp1 HG02602.hp1 HG02622.hp1 HG02683.hp1 HG02723.hp2 HG03041.hp2 HG03491.hp2 HG03579.hp1 HG03704.hp2 HG03831.hp2 HG03834.hp1 HG04184.hp2 HG04199.hp1 NA18747.hp1 NA18747.hp2 NA18950.hp1 NA18955.hp1 NA18955.hp2 NA18960.hp1 NA18966.hp2 NA18971.hp1 NA18979.hp2 NA18982.hp1 NA18983.hp1 NA18991.hp2 NA19003.hp1 NA19004.hp1 NA19010.hp2 NA19078.hp1 NA19081.hp1 NA19091.hp2 NA20905.hp1 NA21309.hp2	a0001 a0002 a0003 others(8): Show a0001 a0002 a0003 a0004 a0005 a0007 a0010 a0011 a0012 a0014 a0024	a0001c0001 a0001c0004 a0002c0002 others(11): Show a0001c0001 a0001c0004 a0002c0002 a0003c0003 a0003c0010 a0004c0005 a0004c0006 a0005c0007 a0007c0015 a0010c0016 a0011c0041 a0012c0032 a0014c0028 a0024c0037	a0001c0001t0002 a0001c0001t0003 a0001c0004t0002 others(13): Show a0001c0001t0002 a0001c0001t0003 a0001c0004t0002 a0002c0002t0002 a0003c0003t0002 a0003c0010t0002 a0004c0005t0001 a0004c0005t0002 a0004c0006t0002 a0005c0007t0002 a0007c0015t0001 a0010c0016t0002 a0011c0041t0002 a0012c0032t0002 a0014c0028t0002 a0024c0037t0002	a0001c0001t0002g0008 a0001c0001t0002g0009 a0001c0001t0002g0020 others(49): Show a0001c0001t0002g0008 a0001c0001t0002g0009 a0001c0001t0002g0020 a0001c0001t0002g0021 a0001c0001t0002g0029 a0001c0001t0002g0047 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0075 a0001c0001t0002g0088 a0001c0001t0002g0129 a0001c0001t0002g0142 a0001c0001t0002g0159 a0001c0001t0003g0048 a0001c0004t0002g0098 a0001c0004t0002g0111 a0001c0004t0002g0132 a0001c0004t0002g0149 a0002c0002t0002g0022 a0002c0002t0002g0053 a0002c0002t0002g0084 a0002c0002t0002g0096 a0002c0002t0002g0107 a0002c0002t0002g0109 a0002c0002t0002g0113 a0002c0002t0002g0120 a0002c0002t0002g0121 a0002c0002t0002g0123 a0002c0002t0002g0128 a0002c0002t0002g0131 a0002c0002t0002g0180 a0003c0003t0002g0199 a0003c0003t0002g0208 a0003c0003t0002g0216 a0003c0003t0002g0226 a0003c0010t0002g0262 a0004c0005t0001g0255 a0004c0005t0001g0263 a0004c0005t0002g0198 a0004c0005t0002g0205 a0004c0005t0002g0223 a0004c0005t0002g0231 a0004c0005t0002g0251 a0004c0005t0002g0264 a0004c0006t0002g0234 a0005c0007t0002g0228 a0007c0015t0001g0054 a0010c0016t0002g0174 a0011c0041t0002g0184 a0012c0032t0002g0066 a0014c0028t0002g0069 a0024c0037t0002g0270	52	292	0.1781	28	c.285 others(47): Show c.2859+2795_2859+2796insGGAAGGAAGGAAGGAAGGAAGGAAGG AA	FLT3	ENSG00000122025.15	transcript	ENST00000241453.12	protein_coding	23/23			chr13	TogoVar
FLT3_chr13_27998274_28105576	28053397	G G	GATATATA others(21): Show GATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01891.hp2 HG02280.hp2 others(6): Show HG01884.hp2 HG01891.hp2 HG02280.hp2 HG02451.hp2 HG02965.hp1 HG03195.hp2 HG03471.hp2 HG03579.hp2 NA18747.hp1	a0002 a0003 a0002 a0003	a0002c0002 a0003c0021 a0003c0022 others(1): Show a0002c0002 a0003c0021 a0003c0022 a0003c0050	a0002c0002t0002 a0003c0021t0001 a0003c0022t0001 others(1): Show a0002c0002t0002 a0003c0021t0001 a0003c0022t0001 a0003c0050t0001	a0002c0002t0002g0096 a0002c0002t0002g0145 a0002c0002t0002g0146 others(6): Show a0002c0002t0002g0096 a0002c0002t0002g0145 a0002c0002t0002g0146 a0002c0002t0002g0161 a0002c0002t0002g0162 a0003c0021t0001g0256 a0003c0021t0001g0257 a0003c0022t0001g0229 a0003c0050t0001g0290	9	292	0.0308	28	c.485 others(43): Show c.485-724_485-723insATATATATATATATATATATATATATAT	FLT3	ENSG00000122025.15	transcript	ENST00000241453.12	protein_coding	4/23			chr13	TogoVar
FLT4_chr5_180596506_180654600	180615711	A A	AGCACTGG others(21): Show AGCACTGGGCCTGCCGGTCACCTCCCTTC	intron_variant intron_variant	MODIFIER	HG02056.hp1 HG02056.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0220 a0001c0001t0001g0220	1	388	0.0026	28	c.321 others(45): Show c.3219+655_3219+656insGAAGGGAGGTGACCGGCAGGCCCAGTGC	FLT4	ENSG00000037280.16	transcript	ENST00000261937.11	protein_coding	23/29			chr5	TogoVar
FLT4_chr5_180596506_180654600	180634970	G G	GTGGATGG others(21): Show GTGGATGGGTGGATGGATGGATGGAAGTA	intron_variant intron_variant	MODIFIER	HG02015.hp2 HG02015.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0089 a0002c0002t0001g0089	1	388	0.0026	28	c.59- others(43): Show c.59-3193_59-3192insTACTTCCATCCATCCATCCACCCATCCA	FLT4	ENSG00000037280.16	transcript	ENST00000261937.11	protein_coding	1/29			chr5	TogoVar
FLT4_chr5_180596506_180654600	180635006	A A	ATGGATGG others(21): Show ATGGATGGAAGTATGGGTGGATGGGTGGG	intron_variant intron_variant	MODIFIER	NA18970.hp2 NA18970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0273 a0001c0001t0002g0273	1	388	0.0026	28	c.59- others(43): Show c.59-3229_59-3228insCCCACCCATCCACCCATACTTCCATCCA	FLT4	ENSG00000037280.16	transcript	ENST00000261937.11	protein_coding	1/29			chr5	TogoVar
FLT4_chr5_180596506_180654600	180635161	G G	GATGGGTG others(21): Show GATGGGTGGGTGGGTGGGTGGATGGATGC	intron_variant intron_variant	MODIFIER	NA18953.hp2 NA18980.hp2 NA18953.hp2 NA18980.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0002 a0001c0001t0003	a0001c0001t0002g0275 a0001c0001t0003g0227 a0001c0001t0002g0275 a0001c0001t0003g0227	2	388	0.0052	28	c.59- others(43): Show c.59-3384_59-3383insGCATCCATCCACCCACCCACCCACCCAT	FLT4	ENSG00000037280.16	transcript	ENST00000261937.11	protein_coding	1/29			chr5	TogoVar
FLT4_chr5_180596506_180654600	180635241	G G	GGTGGGTG others(21): Show GGTGGGTGGGTGGGTGGGAGGATGGATGC	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG00741.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0075 a0001c0001t0001g0075	1	388	0.0026	28	c.59- others(43): Show c.59-3464_59-3463insGCATCCATCCTCCCACCCACCCACCCAC	FLT4	ENSG00000037280.16	transcript	ENST00000261937.11	protein_coding	1/29			chr5	TogoVar
FLVCR1_chr1_212853275_212904363	212860350	G G	GTTTTTTT others(21): Show GTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01433.hp1 HG02895.hp1 HG00639.hp2 HG01433.hp1 HG02895.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0102 a0003c0003t0106 a0003c0003t0113 a0003c0003t0102 a0003c0003t0106 a0003c0003t0113	a0003c0003t0102g0147 a0003c0003t0106g0148 a0003c0003t0113g0149 a0003c0003t0102g0147 a0003c0003t0106g0148 a0003c0003t0113g0149	3	368	0.0082	28	c.738 others(45): Show c.738+1178_738+1179insTTTTTTTTTTTTTTTTTTTTTTTTTTTT	FLVCR1	ENSG00000162769.13	transcript	ENST00000366971.9	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr1	TogoVar
FLVCR1_chr1_212853275_212904363	212897345	T T	TACACACA others(21): Show TACACACACACACACACACACACACACAC	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA20300.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0077 a0001c0001t0077	a0001c0001t0077g0290 a0001c0001t0077g0290	1	368	0.0027	28	c.20 others(39): Show c.2058_*2059insCACACACACACACACACACACACACACA	FLVCR1	ENSG00000162769.13	transcript	ENST00000366971.9	protein_coding	10/10	2059	INFO_REALIGN_3_PRIME	chr1	TogoVar
FLVCR1_chr1_212853275_212904363	212897349	T T	TACACACA others(21): Show TACACACACACACACACACACACACACAC	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01069.hp2 HG01071.hp2 HG03098.hp2 others(3): Show HG01069.hp2 HG01071.hp2 HG03098.hp2 HG06807.hp1 NA18522.hp1 NA19084.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0023 a0001c0001t0059 a0001c0001t0072 others(1): Show a0001c0001t0023 a0001c0001t0059 a0001c0001t0072 a0003c0003t0103	a0001c0001t0023g0012 a0001c0001t0059g0251 a0001c0001t0072g0293 others(1): Show a0001c0001t0023g0012 a0001c0001t0059g0251 a0001c0001t0072g0293 a0003c0003t0103g0134	6	368	0.0163	28	c.20 others(39): Show c.2080_*2081insCACACACACACACACACACACACACACA	FLVCR1	ENSG00000162769.13	transcript	ENST00000366971.9	protein_coding	10/10	2081	INFO_REALIGN_3_PRIME	chr1	TogoVar
FLYWCH1_chr16_2906931_2956208	2942654	A A	ATCTGTAC others(21): Show ATCTGTACAGATCAGCCTTAACACGGCAG	intron_variant intron_variant	MODIFIER	NA19002.hp1 NA19002.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0053 a0001c0002t0053	a0001c0002t0053g0258 a0001c0002t0053g0258	1	416	0.0024	28	c.211 others(47): Show c.2111+2562_2111+2563insTCTGTACAGATCAGCCTTAACACGGC AG	FLYWCH1	ENSG00000059122.17	transcript	ENST00000253928.14	protein_coding	9/9			chr16	TogoVar
FLYWCH2_chr16_2878215_2904365	2892909	T T	TATATAAT others(21): Show TATATAATGTATATATTATATGTCATATA	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0153 a0002c0002t0002g0153	1	390	0.0026	28	c.-19 others(47): Show c.-199-2306_-199-2305insATGTATATATTATATGTCATATAATA TA	FLYWCH2	ENSG00000162076.13	transcript	ENST00000396958.8	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr16	TogoVar

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