Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
GALNT17_chr7_71127144_71718599	71319096	A A	ATCTTTCT others(21): Show ATCTTTCTTTCTTTCTTTCTTTCTTTCTT	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG03492.hp1 HG01106.hp2 HG03492.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0032 a0001c0001t0004g0028 a0001c0001t0001g0032 a0001c0001t0004g0028	2	76	0.0263	28	c.239 others(47): Show c.239-16452_239-16425dupCTTTCTTTCTTTCTTTCTTTCTTTCT TT	GALNT17	ENSG00000185274.13	transcript	ENST00000333538.10	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr7	TogoVar
GALNT17_chr7_71127144_71718599	71321902	C C	CCTTCCTT others(21): Show CCTTCCTTCCTTCCTTCCTTCCTTCCTTT	intron_variant intron_variant	MODIFIER	HG00642.hp1 NA19000.hp1 HG00642.hp1 NA19000.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0011 a0001c0002t0003 a0001c0001t0011 a0001c0002t0003	a0001c0001t0011g0049 a0001c0002t0003g0006 a0001c0001t0011g0049 a0001c0002t0003g0006	2	76	0.0263	28	c.239 others(47): Show c.239-13627_239-13626insTTCCTTTCTTCCTTCCTTCCTTCCTT CC	GALNT17	ENSG00000185274.13	transcript	ENST00000333538.10	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr7	TogoVar
GALNT17_chr7_71127144_71718599	71614893	G G	GAGGGAGG others(21): Show GAGGGAGGGAGGGAGGGAGGGAGGGAGGA	intron_variant intron_variant	MODIFIER	HG04228.hp1 HG04228.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0065 a0001c0001t0009g0065	1	76	0.0132	28	c.108 others(49): Show c.1080+43506_1080+43507insGAGGGAGGGAGGAAGGGAGGGAGG GAGG	GALNT17	ENSG00000185274.13	transcript	ENST00000333538.10	protein_coding	6/10		INFO_REALIGN_3_PRIME	chr7	TogoVar
GALNT17_chr7_71127144_71718599	71616929	T T	TCTTATAA others(21): Show TCTTATAAGAATCATATTAAGAATAAATA	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0010 a0001c0002t0010	a0001c0002t0010g0074 a0001c0002t0010g0074	1	76	0.0132	28	c.108 others(49): Show c.1080+45527_1080+45528insCTTATAAGAATCATATTAAGAATA AATA	GALNT17	ENSG00000185274.13	transcript	ENST00000333538.10	protein_coding	6/10			chr7	TogoVar
GALNT17_chr7_71127144_71718599	71693305	C C	CATATATA others(21): Show CATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02129.hp2 HG02129.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0014 a0001c0003t0014	a0001c0003t0014g0070 a0001c0003t0014g0070	1	76	0.0132	28	c.150 others(49): Show c.1500+16000_1500+16001insTATATATATATATATATATATATA TATA	GALNT17	ENSG00000185274.13	transcript	ENST00000333538.10	protein_coding	9/10		INFO_REALIGN_3_PRIME	chr7	TogoVar
GALNT17_chr7_71127144_71718599	71693309	C C	CACATATA others(21): Show CACATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19060.hp2 NA19060.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0076 a0001c0001t0015g0076	1	76	0.0132	28	c.150 others(49): Show c.1500+16004_1500+16005insCATATATATATATATATATATATA TATA	GALNT17	ENSG00000185274.13	transcript	ENST00000333538.10	protein_coding	9/10		INFO_REALIGN_3_PRIME	chr7	TogoVar
GALNT18_chr11_11265877_11627005	11290605	T T	TCTCCCTG others(21): Show TCTCCCTGGAATGCCCTTCACTCCTTCCA	intron_variant intron_variant	MODIFIER	NA18978.hp1 NA18978.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0120 a0001c0003t0001g0120	1	260	0.0039	28	c.167 others(47): Show c.1677+2396_1677+2423dupTGGAAGGAGTGAAGGGCATTCCAGGG AG	GALNT18	ENSG00000110328.6	transcript	ENST00000227756.5	protein_coding	10/10			chr11	TogoVar
GALNT1_chr18_35576740_35716834	35672822	T T	TTTATTGA others(21): Show TTTATTGAATGCTTTATTATATACCAGTG	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0167 a0001c0001t0013g0167	1	310	0.0032	28	c.315 others(45): Show c.315-4764_315-4737dupTGAATGCTTTATTATATACCAGTGTTAT	GALNT1	ENSG00000141429.14	transcript	ENST00000269195.6	protein_coding	3/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
GALNT5_chr2_157252705_157323491	157290112	T T	TATATATA others(21): Show TATATATATATATATATATATACACACAC	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA20129.hp2 NA18906.hp1 NA20129.hp2	a0001 a0004 a0001 a0004	a0001c0002 a0004c0006 a0001c0002 a0004c0006	a0001c0002t0047 a0004c0006t0013 a0001c0002t0047 a0004c0006t0013	a0001c0002t0047g0092 a0004c0006t0013g0180 a0001c0002t0047g0092 a0004c0006t0013g0180	2	282	0.0071	28	c.174 others(47): Show c.1741+3979_1741+3980insTATATATATATATATATATACACACA CA	GALNT5	ENSG00000136542.9	transcript	ENST00000259056.5	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALNT5_chr2_157252705_157323491	157290112	T T	TATATATA others(21): Show TATATATATATATATATATATATACACAC	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0027 a0002c0005t0027	a0002c0005t0027g0202 a0002c0005t0027g0202	1	282	0.0036	28	c.174 others(47): Show c.1741+3979_1741+3980insTATATATATATATATATATATACACA CA	GALNT5	ENSG00000136542.9	transcript	ENST00000259056.5	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALNT7_chr4_173163811_173328967	173216706	C C	CATATATA others(21): Show CATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00639.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0014 a0001c0002t0001g0014	1	266	0.0038	28	c.127 others(47): Show c.127-31252_127-31251insATATATATATATATATATATATATAT AT	GALNT7	ENSG00000109586.12	transcript	ENST00000265000.9	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr4	TogoVar
GALNTL6_chr4_171808404_173046559	171899077	T T	TATTTAGT others(21): Show TATTTAGTATTTATTAATACTAAATAAAA	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp2 HG02015.hp2 others(20): Show HG01884.hp1 HG01884.hp2 HG02015.hp2 HG02145.hp1 HG02145.hp2 HG02258.hp1 HG02258.hp2 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02717.hp2 HG02723.hp2 HG02735.hp2 HG02965.hp1 HG02976.hp2 HG03130.hp1 HG03139.hp1 HG03139.hp2 HG03195.hp2 HG03516.hp1 NA18522.hp2 NA18906.hp1 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0003t0001 a0001c0003t0005	a0001c0001t0001g0014 a0001c0001t0001g0017 a0001c0001t0001g0036 others(20): Show a0001c0001t0001g0014 a0001c0001t0001g0017 a0001c0001t0001g0036 a0001c0001t0001g0040 a0001c0001t0002g0003 a0001c0001t0002g0008 a0001c0001t0002g0022 a0001c0001t0002g0025 a0001c0001t0002g0026 a0001c0001t0002g0035 a0001c0001t0002g0037 a0001c0001t0002g0039 a0001c0001t0003g0019 a0001c0001t0004g0002 a0001c0001t0007g0006 a0001c0001t0009g0024 a0001c0001t0010g0021 a0001c0001t0011g0031 a0001c0002t0001g0016 a0001c0002t0002g0007 a0001c0002t0003g0001 a0001c0003t0001g0005 a0001c0003t0005g0004	23	40	0.5750	28	c.138 others(47): Show c.138+84370_138+84397dupTATTAATACTAAATAAAAATTTAGTA TT	GALNTL6	ENSG00000174473.17	transcript	ENST00000506823.6	protein_coding	2/12		INFO_REALIGN_3_PRIME	chr4	TogoVar
GALNTL6_chr4_171808404_173046559	172177791	A A	ATATATAT others(21): Show ATATATATACACACACATATATGTGTGTG	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02015.hp2 HG02145.hp1 others(5): Show HG01884.hp1 HG02015.hp2 HG02145.hp1 HG02735.hp1 HG02735.hp2 NA18906.hp1 NA20752.hp1 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0003t0001 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0003t0001 a0001c0003t0005	a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0034 others(5): Show a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0034 a0001c0001t0001g0040 a0001c0001t0002g0035 a0001c0001t0002g0039 a0001c0003t0001g0005 a0001c0003t0005g0004	8	40	0.2000	28	c.139 others(47): Show c.139-51843_139-51816dupGTGTGTGTATATATACACACACATAT AT	GALNTL6	ENSG00000174473.17	transcript	ENST00000506823.6	protein_coding	2/12		INFO_REALIGN_3_PRIME	chr4	TogoVar
GALNTL6_chr4_171808404_173046559	172177800	C C	CACACATA others(21): Show CACACATATATACACATGTGTATATATAT	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0031 a0001c0001t0011g0031	1	40	0.0250	28	c.139 others(47): Show c.139-51851_139-51850insTATATACACATGTGTATATATATACA CA	GALNTL6	ENSG00000174473.17	transcript	ENST00000506823.6	protein_coding	2/12		INFO_REALIGN_3_PRIME	chr4	TogoVar
GALNTL6_chr4_171808404_173046559	172351183	C C	CTGTCTGT others(21): Show CTGTCTGTCTGTCTATCTATTTATCTATT	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0023 a0001c0001t0001g0023	1	40	0.0250	28	c.553 others(45): Show c.553+2495_553+2496insGTCTGTCTGTCTATCTATTTATCTATTT	GALNTL6	ENSG00000174473.17	transcript	ENST00000506823.6	protein_coding	5/12		INFO_REALIGN_3_PRIME	chr4	TogoVar
GALNTL6_chr4_171808404_173046559	172528952	C C	CATATATA others(21): Show CATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02630.hp1 HG02717.hp2 others(3): Show HG02258.hp1 HG02630.hp1 HG02717.hp2 HG02965.hp1 HG03130.hp1 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 a0001c0001t0011 a0001c0002t0003	a0001c0001t0001g0015 a0001c0001t0002g0022 a0001c0001t0002g0025 others(3): Show a0001c0001t0001g0015 a0001c0001t0002g0022 a0001c0001t0002g0025 a0001c0001t0009g0024 a0001c0001t0011g0031 a0001c0002t0003g0001	6	40	0.1500	28	c.553 others(49): Show c.553+180275_553+180276insATATATATATATATATATATATAT ATAT	GALNTL6	ENSG00000174473.17	transcript	ENST00000506823.6	protein_coding	5/12		INFO_REALIGN_3_PRIME	chr4	TogoVar
GALNTL6_chr4_171808404_173046559	173022070	G G	GGAAGGAA others(21): Show GGAAGGAAAGAAGGAAGGAAGGAAGGAAA	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0002 a0001c0001t0004g0002	1	40	0.0250	28	c.163 others(45): Show c.1638+452_1638+453insAGAAGGAAGGAAGGAAGGAAAGAAGGAA	GALNTL6	ENSG00000174473.17	transcript	ENST00000506823.6	protein_coding	12/12		INFO_REALIGN_3_PRIME	chr4	TogoVar
GALNTL6_chr4_171808404_173046559	173022070	G G	GGAAGGAA others(21): Show GGAAGGAAGGAAAGAAGGAAGGAAGGAAA	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02717.hp1 HG02647.hp2 HG02717.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0002 a0001c0001t0001 a0001c0002t0002	a0001c0001t0001g0030 a0001c0002t0002g0007 a0001c0001t0001g0030 a0001c0002t0002g0007	2	40	0.0500	28	c.163 others(45): Show c.1638+456_1638+457insAGAAGGAAGGAAGGAAAGAAGGAAGGAA	GALNTL6	ENSG00000174473.17	transcript	ENST00000506823.6	protein_coding	12/12		INFO_REALIGN_3_PRIME	chr4	TogoVar
GALNTL6_chr4_171808404_173046559	173022094	G G	GGAAAGAA others(21): Show GGAAAGAAGGAAGGAAGGAAGGAAGGAAA	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0036 a0001c0001t0001g0036	1	40	0.0250	28	c.163 others(45): Show c.1638+472_1638+473insAGAAGGAAGGAAGGAAGGAAGGAAAGAA	GALNTL6	ENSG00000174473.17	transcript	ENST00000506823.6	protein_coding	12/12		INFO_REALIGN_3_PRIME	chr4	TogoVar
GALR1_chr18_77244848_77282900	77281061	T T	TTATATAT others(21): Show TTATATATATATATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0048 a0001c0004t0048	a0001c0004t0048g0325 a0001c0004t0048g0325	1	366	0.0027	28	c.12 others(41): Show c.12159_*12160insTATATATATATATATATATATATATATA	GALR1	ENSG00000166573.6	transcript	ENST00000299727.5	protein_coding		3162		chr18	TogoVar
GALR1_chr18_77244848_77282900	77281062	A A	AATATATA others(21): Show AATATATATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp2 HG00738.hp2 HG01257.hp1 others(7): Show HG00140.hp2 HG00738.hp2 HG01257.hp1 HG01981.hp1 HG02004.hp2 HG02155.hp1 HG03486.hp1 HG04115.hp2 NA18981.hp1 NA19010.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0001c0002 a0001c0004 others(1): Show a0001c0001 a0001c0002 a0001c0004 a0005c0009	a0001c0001t0003 a0001c0001t0006 a0001c0001t0010 others(7): Show a0001c0001t0003 a0001c0001t0006 a0001c0001t0010 a0001c0001t0039 a0001c0002t0004 a0001c0002t0007 a0001c0002t0022 a0001c0002t0031 a0001c0004t0018 a0005c0009t0124	a0001c0001t0003g0254 a0001c0001t0006g0047 a0001c0001t0010g0271 others(7): Show a0001c0001t0003g0254 a0001c0001t0006g0047 a0001c0001t0010g0271 a0001c0001t0039g0284 a0001c0002t0004g0143 a0001c0002t0007g0183 a0001c0002t0022g0181 a0001c0002t0031g0228 a0001c0004t0018g0329 a0005c0009t0124g0174	10	366	0.0273	28	c.12 others(41): Show c.12160_*12161insATATATATATATATATATATATATATAT	GALR1	ENSG00000166573.6	transcript	ENST00000299727.5	protein_coding		3163		chr18	TogoVar
GALR1_chr18_77244848_77282900	77281090	T T	TATATATA others(21): Show TATATATATATATATATATATATATATAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp1 HG01516.hp2 HG01517.hp1 others(4): Show HG00639.hp1 HG01516.hp2 HG01517.hp1 NA18747.hp1 NA18940.hp1 NA19065.hp1 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0027 others(1): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0027 a0001c0001t0040	a0001c0001t0001g0080 a0001c0001t0006g0010 a0001c0001t0006g0082 others(3): Show a0001c0001t0001g0080 a0001c0001t0006g0010 a0001c0001t0006g0082 a0001c0001t0006g0091 a0001c0001t0027g0060 a0001c0001t0040g0101	7	366	0.0191	28	c.12 others(41): Show c.12188_*12189insATATATATATATATATATATATATATAA	GALR1	ENSG00000166573.6	transcript	ENST00000299727.5	protein_coding		3191		chr18	TogoVar
GAPVD1_chr9_125256826_125372207	125293629	T T	TATATATA others(21): Show TATATATATATAATATAAAAATATATATA	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0013 a0001c0001t0017g0013	1	340	0.0029	28	c.-14 others(47): Show c.-149-1828_-149-1801dupATATATATATAATATAAAAATATATA TA	GAPVD1	ENSG00000165219.23	transcript	ENST00000297933.11	protein_coding	2/27		INFO_REALIGN_3_PRIME	chr9	TogoVar
GAPVD1_chr9_125256826_125372207	125293630	A A	ATATATAT others(21): Show ATATATATATAATATAAAAATATATATAT	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG01358.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0046 a0001c0001t0016g0046	1	340	0.0029	28	c.-14 others(47): Show c.-149-1792_-149-1765dupATAATATAAAAATATATATATTATAT AT	GAPVD1	ENSG00000165219.23	transcript	ENST00000297933.11	protein_coding	2/27		INFO_REALIGN_3_PRIME	chr9	TogoVar
GAPVD1_chr9_125256826_125372207	125293864	A A	AAATATAT others(21): Show AAATATATTTTATATATATATAAATATAT	intron_variant intron_variant	MODIFIER	NA18991.hp2 NA18991.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0273 a0001c0001t0001g0273	1	340	0.0029	28	c.-14 others(47): Show c.-149-1594_-149-1593insAATATATTTTATATATATATAAATAT AT	GAPVD1	ENSG00000165219.23	transcript	ENST00000297933.11	protein_coding	2/27			chr9	TogoVar
GAREM1_chr18_32258522_32475882	32363995	C C	CATATATA others(21): Show CATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01081.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0122 a0001c0001t0010g0122	1	192	0.0052	28	c.262 others(47): Show c.262+28872_262+28899dupATATATATATATATATATATATATAT AT	GAREM1	ENSG00000141441.16	transcript	ENST00000269209.7	protein_coding	2/5			chr18	TogoVar
GAREM1_chr18_32258522_32475882	32364026	A A	ATATATAT others(21): Show ATATATATATATGTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02055.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0188 a0001c0003t0003g0188	1	192	0.0052	28	c.262 others(47): Show c.262+28868_262+28869insAAAAAAAAAAAAAAAACATATATATA TA	GAREM1	ENSG00000141441.16	transcript	ENST00000269209.7	protein_coding	2/5			chr18	TogoVar
GAREM1_chr18_32258522_32475882	32471918	G G	GCTTGCTT others(21): Show GCTTGCTTGCTTGCTTGCTTTCTTTCTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0023 a0002c0005t0023	a0002c0005t0023g0007 a0002c0005t0023g0007	1	192	0.0052	28	c.-14 others(39): Show c.-1491_-1490insAAAGAAAGAAAGCAAGCAAGCAAGCAAG	GAREM1	ENSG00000141441.16	transcript	ENST00000269209.7	protein_coding		1037		chr18	TogoVar
GAREM1_chr18_32258522_32475882	32471918	G G	GCTTGCTT others(21): Show GCTTGCTTGCTTTCTTTCTTTCTTTCTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0021 a0001c0002t0021	a0001c0002t0021g0001 a0001c0002t0021g0001	1	192	0.0052	28	c.-14 others(39): Show c.-1491_-1490insAAAGAAAGAAAGAAAGAAAGCAAGCAAG	GAREM1	ENSG00000141441.16	transcript	ENST00000269209.7	protein_coding		1037		chr18	TogoVar
GARIN5A_chr19_50461788_50481848	50472243	T T	TTATATAT others(21): Show TTATATATACATGTATGTGTGTATATATG	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG02074.hp1 NA18964.hp1 HG01070.hp1 HG02074.hp1 NA18964.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0044 a0001c0001t0001g0160 a0001c0001t0001g0044 a0001c0001t0001g0160	3	414	0.0073	28	c.539 others(45): Show c.539+3054_539+3081dupCATATATACACACATACATGTATATATA	GARIN5A	ENSG00000142530.11	transcript	ENST00000600100.6	protein_coding	3/4			chr19	TogoVar
GARNL3_chr9_127259774_127398660	127331720	C C	CTTGCTTT others(21): Show CTTGCTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG06807.hp2 HG03579.hp1 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0019 a0001c0001t0001g0022 a0001c0001t0001g0019 a0001c0001t0001g0022	2	300	0.0067	28	c.595 others(43): Show c.595-552_595-551insGCTTTTTTTTTTTTTTTTTTTTTTTTTT	GARNL3	ENSG00000136895.19	transcript	ENST00000373387.9	protein_coding	7/27		INFO_REALIGN_3_PRIME	chr9	TogoVar
GARNL3_chr9_127259774_127398660	127331720	C C	CTTTTTTT others(21): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00609.hp1 HG01952.hp1 others(7): Show HG00558.hp1 HG00609.hp1 HG01952.hp1 HG02027.hp1 NA18939.hp1 NA18975.hp1 NA18980.hp1 NA18993.hp2 NA19043.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0001 a0001c0007t0001 a0001c0001t0001 a0001c0007t0001	a0001c0001t0001g0024 a0001c0001t0001g0032 a0001c0001t0001g0163 others(7): Show a0001c0001t0001g0024 a0001c0001t0001g0032 a0001c0001t0001g0163 a0001c0001t0001g0166 a0001c0001t0001g0253 a0001c0001t0001g0255 a0001c0001t0001g0260 a0001c0001t0001g0263 a0001c0001t0001g0267 a0001c0007t0001g0265	10	300	0.0333	28	c.595 others(43): Show c.595-539_595-538insTTTTTTTTTTTTTTTTTTTTTTTTTTTT	GARNL3	ENSG00000136895.19	transcript	ENST00000373387.9	protein_coding	7/27		INFO_REALIGN_3_PRIME	chr9	TogoVar
GARNL3_chr9_127259774_127398660	127391533	A A	AAAAAAAA others(21): Show AAAAAAAAAAAAAAAAAAAAAATATATAT	intron_variant intron_variant	MODIFIER	HG01952.hp1 HG02004.hp2 HG02056.hp2 others(9): Show HG01952.hp1 HG02004.hp2 HG02056.hp2 HG02083.hp2 HG03834.hp1 HG04184.hp1 HG04199.hp2 HG04228.hp2 NA18975.hp1 NA18991.hp2 NA18993.hp2 NA19067.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0136 a0001c0001t0001g0166 a0001c0001t0001g0220 others(9): Show a0001c0001t0001g0136 a0001c0001t0001g0166 a0001c0001t0001g0220 a0001c0001t0001g0232 a0001c0001t0001g0236 a0001c0001t0001g0259 a0001c0001t0001g0263 a0001c0001t0001g0267 a0001c0001t0001g0273 a0001c0001t0001g0275 a0001c0001t0001g0281 a0001c0001t0001g0291	12	300	0.0400	28	c.287 others(45): Show c.2870+767_2870+768insAAAAAAAAAAAAAAAAAAAATATATATA	GARNL3	ENSG00000136895.19	transcript	ENST00000373387.9	protein_coding	27/27		INFO_REALIGN_3_PRIME	chr9	TogoVar
GARNL3_chr9_127259774_127398660	127391533	A A	AAAAAAAA others(21): Show AAAAAAAAAAAAAAAAAAAATATATATAT	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00438.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0233 a0001c0001t0001g0233	1	300	0.0033	28	c.287 others(45): Show c.2870+767_2870+768insAAAAAAAAAAAAAAAAAATATATATATA	GARNL3	ENSG00000136895.19	transcript	ENST00000373387.9	protein_coding	27/27		INFO_REALIGN_3_PRIME	chr9	TogoVar
GARRE1_chr19_34249554_34360566	34293715	A A	AAAACACA others(21): Show AAAACACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0183 a0001c0001t0001g0183	1	326	0.0031	28	c.-79 others(47): Show c.-795-5963_-795-5962insAACACACACACACACACACACACACA CA	GARRE1	ENSG00000166398.14	transcript	ENST00000299505.8	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr19	TogoVar
GARRE1_chr19_34249554_34360566	34293715	A A	AACACACA others(21): Show AACACACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01891.hp1 NA19043.hp2 HG01891.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0180 a0001c0001t0001g0206 a0001c0001t0001g0180 a0001c0001t0001g0206	2	326	0.0061	28	c.-79 others(47): Show c.-795-5962_-795-5935dupCACACACACACACACACACACACACA CA	GARRE1	ENSG00000166398.14	transcript	ENST00000299505.8	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr19	TogoVar
GAS2_chr11_22661611_22818001	22789303	T T	TATATATA others(21): Show TATATATATATATATATATATACACACAC	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0247 a0001c0001t0005g0247	1	272	0.0037	28	c.724 others(47): Show c.724-22494_724-22493insTATATATATATATATATATACACACA CA	GAS2	ENSG00000148935.12	transcript	ENST00000454584.7	protein_coding	7/7		INFO_REALIGN_3_PRIME	chr11	TogoVar
GAS2_chr11_22661611_22818001	22789423	G G	GATATATA others(21): Show GATATATATAAATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0147 a0001c0002t0005g0147	1	272	0.0037	28	c.724 others(47): Show c.724-22374_724-22373insTATATATAAATATATATATATATATA TA	GAS2	ENSG00000148935.12	transcript	ENST00000454584.7	protein_coding	7/7		INFO_REALIGN_3_PRIME	chr11	TogoVar
GAS7_chr17_9905606_10203606	10005145	G G	GCATACCA others(21): Show GCATACCAGCATGTGTATGTACATGCATA	intron_variant intron_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0009 a0001c0001t0010g0009	1	218	0.0046	28	c.304 others(47): Show c.304+14631_304+14632insTATGCATGTACATACACATGCTGGTA TG	GAS7	ENSG00000007237.19	transcript	ENST00000432992.7	protein_coding	2/13			chr17	TogoVar
GAS7_chr17_9905606_10203606	10005157	G G	GTGTATGT others(21): Show GTGTATGTACATGCATACATGCATGTGTA	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG01074.hp2 HG01099.hp1 others(59): Show HG00558.hp2 HG01074.hp2 HG01099.hp1 HG01109.hp2 HG01167.hp1 HG01175.hp2 HG02027.hp1 HG02055.hp2 HG02109.hp1 HG02109.hp2 HG02148.hp2 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02280.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02602.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02976.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp2 HG03139.hp1 HG03225.hp2 HG03453.hp1 HG03486.hp2 HG03491.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03834.hp2 HG03942.hp2 HG04184.hp1 HG06807.hp1 NA18522.hp2 NA18747.hp1 NA18906.hp1 NA18967.hp2 NA18998.hp2 NA19043.hp2 NA19057.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(33): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0016 a0001c0001t0017 a0001c0001t0026 a0001c0001t0027 a0001c0001t0028 a0001c0001t0036 a0001c0001t0037 a0001c0001t0038 a0001c0001t0044 a0001c0001t0046 a0001c0001t0057 a0001c0001t0058 a0001c0001t0059 a0001c0001t0069 a0001c0001t0070 a0001c0001t0072 a0001c0002t0001 a0001c0002t0039 a0001c0003t0004 a0001c0003t0014 a0001c0003t0019 a0001c0003t0030 a0001c0003t0032 a0001c0003t0035 a0001c0004t0068 a0001c0005t0003 a0001c0005t0064 a0001c0007t0012	a0001c0001t0001g0040 a0001c0001t0001g0078 a0001c0001t0001g0088 others(59): Show a0001c0001t0001g0040 a0001c0001t0001g0078 a0001c0001t0001g0088 a0001c0001t0001g0097 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0104 a0001c0001t0001g0130 a0001c0001t0001g0133 a0001c0001t0001g0192 a0001c0001t0001g0199 a0001c0001t0001g0209 a0001c0001t0002g0094 a0001c0001t0002g0113 a0001c0001t0003g0044 a0001c0001t0003g0047 a0001c0001t0003g0071 a0001c0001t0003g0121 a0001c0001t0003g0138 a0001c0001t0003g0143 a0001c0001t0003g0149 a0001c0001t0006g0032 a0001c0001t0006g0134 a0001c0001t0007g0016 a0001c0001t0007g0021 a0001c0001t0009g0056 a0001c0001t0009g0135 a0001c0001t0010g0017 a0001c0001t0010g0020 a0001c0001t0012g0022 a0001c0001t0016g0119 a0001c0001t0017g0004 a0001c0001t0017g0006 a0001c0001t0026g0048 a0001c0001t0026g0147 a0001c0001t0027g0182 a0001c0001t0028g0068 a0001c0001t0036g0018 a0001c0001t0037g0007 a0001c0001t0038g0024 a0001c0001t0044g0154 a0001c0001t0046g0087 a0001c0001t0057g0174 a0001c0001t0058g0106 a0001c0001t0059g0151 a0001c0001t0069g0163 a0001c0001t0070g0074 a0001c0001t0072g0178 a0001c0002t0001g0038 a0001c0002t0001g0144 a0001c0002t0039g0001 a0001c0003t0004g0045 a0001c0003t0014g0153 a0001c0003t0019g0158 a0001c0003t0019g0179 a0001c0003t0030g0152 a0001c0003t0032g0025 a0001c0003t0035g0011 a0001c0004t0068g0214 a0001c0005t0003g0150 a0001c0005t0064g0117 a0001c0007t0012g0015	62	218	0.2844	28	c.304 others(47): Show c.304+14619_304+14620insTACACATGCATGTATGCATGTACATA CA	GAS7	ENSG00000007237.19	transcript	ENST00000432992.7	protein_coding	2/13			chr17	TogoVar
GAS7_chr17_9905606_10203606	10005348	T T	TATATATA others(21): Show TATATATATATACACACACACACACACAC	intron_variant intron_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0005 a0001c0001t0012g0005	1	218	0.0046	28	c.304 others(47): Show c.304+14428_304+14429insGTGTGTGTGTGTGTGTGTATATATAT AT	GAS7	ENSG00000007237.19	transcript	ENST00000432992.7	protein_coding	2/13			chr17	TogoVar
GATA3_chr10_8049688_8080198	8061089	C C	CTCTCTCT others(21): Show CTCTCTCTCTCTCTCTCTCTCTCTCTCTT	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0084 a0001c0001t0001g0084	1	370	0.0027	28	c.778 others(45): Show c.778+2249_778+2250insCTCTCTCTCTCTCTCTCTCTCTCTCTTT	GATA3	ENSG00000107485.18	transcript	ENST00000379328.9	protein_coding	3/5		INFO_REALIGN_3_PRIME	chr10	TogoVar
GATA5_chr20_62458497_62480995	62476885	T T	TTTTCTTT others(21): Show TTTTCTTTCTTTCTTTCTTTCTTTCTTTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00621.hp2 HG00741.hp2 HG02083.hp2 others(4): Show HG00621.hp2 HG00741.hp2 HG02083.hp2 HG02273.hp2 HG03491.hp2 NA18961.hp2 NA19087.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0002t0002 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0002 a0001c0003t0006	a0001c0001t0001g0079 a0001c0001t0001g0164 a0001c0001t0002g0006 others(4): Show a0001c0001t0001g0079 a0001c0001t0001g0164 a0001c0001t0002g0006 a0001c0001t0002g0021 a0001c0001t0002g0173 a0001c0002t0002g0102 a0001c0003t0006g0073	7	382	0.0183	28	c.-97 others(37): Show c.-978_-977insGAAAGAAAGAAAGAAAGAAAGAAAGAAA	GATA5	ENSG00000130700.7	transcript	ENST00000252997.3	protein_coding		891		chr20	TogoVar
GATA5_chr20_62458497_62480995	62477094	C C	CTTCCTTC others(21): Show CTTCCTTCCTTCTTTCTTTCCTTCTTTCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01123.hp2 HG01123.hp2	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0025 a0002c0005t0025	a0002c0005t0025g0254 a0002c0005t0025g0254	1	382	0.0026	28	c.-11 others(39): Show c.-1187_-1186insAGAAAGAAGGAAAGAAAGAAGGAAGGAA	GATA5	ENSG00000130700.7	transcript	ENST00000252997.3	protein_coding		1100		chr20	TogoVar
GATA5_chr20_62458497_62480995	62477098	C C	CTTCCTTC others(21): Show CTTCCTTCCTTCCTTCCTTCTTTCTTTCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0030 a0001c0002t0030	a0001c0002t0030g0301 a0001c0002t0030g0301	1	382	0.0026	28	c.-11 others(39): Show c.-1191_-1190insAGAAAGAAAGAAGGAAGGAAGGAAGGAA	GATA5	ENSG00000130700.7	transcript	ENST00000252997.3	protein_coding		1104		chr20	TogoVar
GATA5_chr20_62458497_62480995	62477098	C C	CTTCCTTC others(21): Show CTTCCTTCCTTCTTTCTTTCTTTCTTTCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0007 a0001c0003t0003g0007	1	382	0.0026	28	c.-11 others(39): Show c.-1191_-1190insAGAAAGAAAGAAAGAAAGAAGGAAGGAA	GATA5	ENSG00000130700.7	transcript	ENST00000252997.3	protein_coding		1104		chr20	TogoVar
GATA5_chr20_62458497_62480995	62477249	C C	CCTTTCTT others(21): Show CCTTTCTTTCTCTCTCTCTCTCTTTCTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0030 a0001c0002t0030	a0001c0002t0030g0301 a0001c0002t0030g0301	1	382	0.0026	28	c.-13 others(39): Show c.-1342_-1341insAAAGAAAGAGAGAGAGAGAGAAAGAAAG	GATA5	ENSG00000130700.7	transcript	ENST00000252997.3	protein_coding		1255		chr20	TogoVar
GATA5_chr20_62458497_62480995	62477253	C C	CCTTCCTT others(21): Show CCTTCCTTCCTTCCTTTCTTTCTTTCTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0202 a0001c0003t0003g0202	1	382	0.0026	28	c.-13 others(39): Show c.-1346_-1345insAAAGAAAGAAAGAAAGGAAGGAAGGAAG	GATA5	ENSG00000130700.7	transcript	ENST00000252997.3	protein_coding		1259		chr20	TogoVar
GATA5_chr20_62458497_62480995	62477303	T T	TTTCTTTC others(21): Show TTTCTTTCTTTCCTTCCTTCCTTCCTTCC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0017 a0001c0017	a0001c0017t0007 a0001c0017t0007	a0001c0017t0007g0293 a0001c0017t0007g0293	1	382	0.0026	28	c.-13 others(39): Show c.-1396_-1395insGGAAGGAAGGAAGGAAGGAAAGAAAGAA	GATA5	ENSG00000130700.7	transcript	ENST00000252997.3	protein_coding		1309		chr20	TogoVar
GATA5_chr20_62458497_62480995	62477303	T T	TTTCTTTC others(21): Show TTTCTTTCTTTCTTTCTTTCTTTCCTTCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02155.hp2 HG02155.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0077 a0001c0001t0003g0077	1	382	0.0026	28	c.-13 others(39): Show c.-1396_-1395insGGAAGGAAAGAAAGAAAGAAAGAAAGAA	GATA5	ENSG00000130700.7	transcript	ENST00000252997.3	protein_coding		1309		chr20	TogoVar

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