Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CCDC178_chr18_32932406_33445721	33388519	A A	ATTTTTTT others(22): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0008 a0008	a0008c0009 a0008c0009	a0008c0009t0002 a0008c0009t0002	a0008c0009t0002g0002 a0008c0009t0002g0002	1	58	0.0172	29	c.208 others(46): Show c.208+1020_208+1021insAAAAAAAAAAAAAAAAAAAAAAAAAAAA A	CCDC178	ENSG00000166960.17	transcript	ENST00000383096.8	protein_coding	5/22			chr18	TogoVar
CCDC179_chr11_22841922_22865474	22843193	T T	TGGTGGCT others(22): Show TGGTGGCTTACACTTGTAACCACCATGGGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0164 a0002c0002t0002g0164	1	446	0.0022	29	c.43 others(40): Show c.4316_*4317insTCCCATGGTGGTTACAAGTGTAAGCCACC	CCDC179	ENSG00000255359.3	transcript	ENST00000532798.3	protein_coding		3728		chr11	TogoVar
CCDC179_chr11_22841922_22865474	22850976	A A	ATATATAT others(22): Show ATATATATATTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18981.hp1 NA18981.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0209 a0002c0002t0002g0209	1	446	0.0022	29	c.196 others(46): Show c.196-3456_196-3455insAAAAAAAAAAAAAAAAAAAAATATATAT A	CCDC179	ENSG00000255359.3	transcript	ENST00000532798.3	protein_coding	3/3			chr11	TogoVar
CCDC179_chr11_22841922_22865474	22850976	A A	ATATATAT others(22): Show ATATATATTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18959.hp2 NA18959.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0202 a0002c0002t0002g0202	1	446	0.0022	29	c.196 others(46): Show c.196-3456_196-3455insAAAAAAAAAAAAAAAAAAAAAAATATAT A	CCDC179	ENSG00000255359.3	transcript	ENST00000532798.3	protein_coding	3/3			chr11	TogoVar
CCDC192_chr5_127698391_127946507	127884342	C C	CAAAAAAA others(22): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02056.hp1 HG02300.hp2 HG02056.hp1 HG02300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0016 a0001c0001t0001g0005 a0001c0001t0001g0016	2	234	0.0086	29	c.535 others(46): Show c.535+8708_535+8709insAAAAAAAAAAAAAAAAAAAAAAAAAAAA A	CCDC192	ENSG00000230561.7	transcript	ENST00000514853.5	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr5	TogoVar
CCDC194_chr19_17382196_17399196	17382272	A A	AGAAAGAA others(22): Show AGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01099.hp2 HG01099.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	414	0.0024	29	c.82 others(40): Show c.8236_*8237insCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	CCDC194	ENSG00000269720.3	transcript	ENST00000636079.2	protein_coding		4923		chr19	TogoVar
CCDC194_chr19_17382196_17399196	17382276	A A	AAGAAGAA others(22): Show AAGAAGAAAGAAAGAAAGAAAGAAAGAAAG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18963.hp1 NA18963.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0119 a0001c0001t0001g0119	1	414	0.0024	29	c.82 others(40): Show c.8232_*8233insCTTTCTTTCTTTCTTTCTTTCTTTCTTCT	CCDC194	ENSG00000269720.3	transcript	ENST00000636079.2	protein_coding		4919		chr19	TogoVar
CCDC194_chr19_17382196_17399196	17382276	A A	AGAAAGAA others(22): Show AGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp2 HG00609.hp1 HG00639.hp2 others(5): Show HG00280.hp2 HG00609.hp1 HG00639.hp2 HG01256.hp1 HG01256.hp2 HG02293.hp1 HG03540.hp2 NA18906.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0006 a0001c0001t0021 others(1): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0021 a0002c0002t0037	a0001c0001t0001g0001 a0001c0001t0001g0047 a0001c0001t0006g0008 others(2): Show a0001c0001t0001g0001 a0001c0001t0001g0047 a0001c0001t0006g0008 a0001c0001t0021g0025 a0002c0002t0037g0085	8	414	0.0193	29	c.82 others(40): Show c.8232_*8233insCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	CCDC194	ENSG00000269720.3	transcript	ENST00000636079.2	protein_coding		4919		chr19	TogoVar
CCDC194_chr19_17382196_17399196	17382280	A A	AAAAAGAA others(22): Show AAAAAGAAAGAAAGAAAGAAAGAAAGAAAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0010 a0001c0001t0010g0010	1	414	0.0024	29	c.82 others(40): Show c.8228_*8229insCTTTCTTTCTTTCTTTCTTTCTTTCTTTT	CCDC194	ENSG00000269720.3	transcript	ENST00000636079.2	protein_coding		4915		chr19	TogoVar
CCDC194_chr19_17382196_17399196	17382280	A A	AAGAAGAA others(22): Show AAGAAGAAAGAAAGAAAGAAAGAAAGAAAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0010 a0001c0001t0010g0010	1	414	0.0024	29	c.82 others(40): Show c.8228_*8229insCTTTCTTTCTTTCTTTCTTTCTTTCTTCT	CCDC194	ENSG00000269720.3	transcript	ENST00000636079.2	protein_coding		4915		chr19	TogoVar
CCDC194_chr19_17382196_17399196	17382280	A A	AGAAAGAA others(22): Show AGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03130.hp2 HG04199.hp1 HG03130.hp2 HG04199.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0010 a0001c0001t0001 a0001c0001t0010	a0001c0001t0001g0001 a0001c0001t0010g0010 a0001c0001t0001g0001 a0001c0001t0010g0010	2	414	0.0048	29	c.82 others(40): Show c.8228_*8229insCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	CCDC194	ENSG00000269720.3	transcript	ENST00000636079.2	protein_coding		4915		chr19	TogoVar
CCDC200_chr17_43216420_43233623	43225677	A A	AAGTATAT others(22): Show AAGTATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG01952.hp2 NA19086.hp2 HG00558.hp1 HG01952.hp2 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200	3	334	0.0090	29	c.106 others(46): Show c.106-1129_106-1128insATATATATATATATATATATATATATAC T	CCDC200	ENSG00000236383.9	transcript	ENST00000636331.2	protein_coding	1/3			chr17	TogoVar
CCDC3_chr10_12891625_13006713	12894247	T T	TCCTTCCT others(22): Show TCCTTCCTTCCTTCCTTCTCTCCCTCCCTC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02559.hp1 HG02647.hp2 NA21309.hp1 HG02559.hp1 HG02647.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0018 a0001c0001t0009g0114 a0001c0001t0009g0289 a0001c0001t0009g0018 a0001c0001t0009g0114 a0001c0001t0009g0289	3	392	0.0077	29	c.41 others(40): Show c.4168_*4169insGAGGGAGGGAGAGAAGGAAGGAAGGAAGG	CCDC3	ENSG00000151468.11	transcript	ENST00000378825.5	protein_coding		2377		chr10	TogoVar
CCDC40_chr17_80031642_80105613	80056016	A A	ATATATAT others(22): Show ATATATATATATATATATATTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01257.hp2 HG01257.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0163 a0001c0003t0001g0163	1	378	0.0027	29	c.116 others(48): Show c.1160-2477_1160-2476insATATATATATATATATATTTTTTTTT TTT	CCDC40	ENSG00000141519.15	transcript	ENST00000397545.9	protein_coding	7/19		INFO_REALIGN_3_PRIME	chr17	TogoVar
CCDC40_chr17_80031642_80105613	80056016	A A	ATATATAT others(22): Show ATATATATATATTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03195.hp2 HG03130.hp1 HG03195.hp2	a0001 a0001	a0001c0009 a0001c0021 a0001c0009 a0001c0021	a0001c0009t0004 a0001c0021t0006 a0001c0009t0004 a0001c0021t0006	a0001c0009t0004g0196 a0001c0021t0006g0289 a0001c0009t0004g0196 a0001c0021t0006g0289	2	378	0.0053	29	c.116 others(48): Show c.1160-2477_1160-2476insATATATATATTTTTTTTTTTTTTTTT TTT	CCDC40	ENSG00000141519.15	transcript	ENST00000397545.9	protein_coding	7/19		INFO_REALIGN_3_PRIME	chr17	TogoVar
CCDC40_chr17_80031642_80105613	80056016	A A	ATATATAT others(22): Show ATATATATTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02055.hp1 NA18522.hp1 HG01243.hp1 HG02055.hp1 NA18522.hp1	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0004 a0001c0009t0004	a0001c0009t0004g0203 a0001c0009t0004g0204 a0001c0009t0004g0205 a0001c0009t0004g0203 a0001c0009t0004g0204 a0001c0009t0004g0205	3	378	0.0079	29	c.116 others(48): Show c.1160-2477_1160-2476insATATATTTTTTTTTTTTTTTTTTTTT TTT	CCDC40	ENSG00000141519.15	transcript	ENST00000397545.9	protein_coding	7/19		INFO_REALIGN_3_PRIME	chr17	TogoVar
CCDC40_chr17_80031642_80105613	80056016	A A	ATATATTT others(22): Show ATATATTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0004 a0001c0009t0004	a0001c0009t0004g0201 a0001c0009t0004g0201	1	378	0.0027	29	c.116 others(48): Show c.1160-2477_1160-2476insATATTTTTTTTTTTTTTTTTTTTTTT TTT	CCDC40	ENSG00000141519.15	transcript	ENST00000397545.9	protein_coding	7/19		INFO_REALIGN_3_PRIME	chr17	TogoVar
CCDC40_chr17_80031642_80105613	80090401	C C	CAACACGG others(22): Show CAACACGGGACGCGCGCAGGCACGTGCACG	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00323.hp2 HG00408.hp1 others(110): Show HG00099.hp2 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00639.hp1 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG00738.hp2 HG01074.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01169.hp1 HG01169.hp2 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01256.hp2 HG01257.hp1 HG01261.hp1 HG01346.hp2 HG01516.hp2 HG01517.hp2 HG01952.hp2 HG02004.hp2 HG02027.hp1 HG02055.hp1 HG02056.hp2 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02129.hp1 HG02135.hp2 HG02258.hp2 HG02300.hp2 HG02451.hp1 HG02523.hp1 HG02615.hp2 HG02683.hp1 HG02809.hp2 HG02895.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG03041.hp1 HG03130.hp1 HG03195.hp1 HG03195.hp2 HG03239.hp1 HG03453.hp2 HG03486.hp1 HG03540.hp1 HG03654.hp1 HG03669.hp2 HG03688.hp2 HG03831.hp1 HG03927.hp1 HG03942.hp2 HG04228.hp1 NA18522.hp1 NA18747.hp2 NA18940.hp1 NA18941.hp2 NA18942.hp2 NA18944.hp1 NA18946.hp1 NA18952.hp2 NA18962.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18973.hp1 NA18973.hp2 NA18975.hp1 NA18978.hp1 NA18982.hp2 NA18984.hp2 NA18989.hp1 NA18989.hp2 NA18992.hp2 NA18993.hp2 NA18995.hp2 NA18999.hp1 NA18999.hp2 NA19002.hp1 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19011.hp2 NA19058.hp2 NA19060.hp1 NA19063.hp2 NA19066.hp2 NA19068.hp1 NA19082.hp1 NA19082.hp2 NA19088.hp2 NA19090.hp2 NA19091.hp1 NA20129.hp1 NA20300.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0006 others(6): Show a0001 a0002 a0006 a0011 a0012 a0024 a0027 a0033 a0037	a0001c0002 a0001c0003 a0001c0004 others(26): Show a0001c0002 a0001c0003 a0001c0004 a0001c0008 a0001c0009 a0001c0013 a0001c0014 a0001c0021 a0001c0025 a0001c0039 a0001c0059 a0001c0063 a0001c0066 a0001c0073 a0001c0075 a0001c0080 a0002c0018 a0002c0019 a0002c0020 a0002c0044 a0002c0049 a0006c0027 a0006c0048 a0011c0037 a0012c0028 a0024c0046 a0027c0064 a0033c0069 a0037c0043	a0001c0002t0003 a0001c0003t0001 a0001c0004t0002 others(28): Show a0001c0002t0003 a0001c0003t0001 a0001c0004t0002 a0001c0004t0011 a0001c0008t0004 a0001c0009t0004 a0001c0013t0003 a0001c0014t0002 a0001c0014t0003 a0001c0021t0006 a0001c0025t0002 a0001c0039t0003 a0001c0059t0002 a0001c0063t0002 a0001c0066t0003 a0001c0073t0002 a0001c0075t0010 a0001c0080t0002 a0002c0018t0002 a0002c0019t0002 a0002c0020t0002 a0002c0044t0002 a0002c0049t0002 a0006c0027t0002 a0006c0048t0001 a0011c0037t0003 a0012c0028t0001 a0024c0046t0009 a0027c0064t0003 a0033c0069t0002 a0037c0043t0001	a0001c0002t0003g0003 a0001c0002t0003g0051 a0001c0002t0003g0076 others(110): Show a0001c0002t0003g0003 a0001c0002t0003g0051 a0001c0002t0003g0076 a0001c0002t0003g0157 a0001c0002t0003g0218 a0001c0002t0003g0220 a0001c0002t0003g0224 a0001c0002t0003g0225 a0001c0002t0003g0226 a0001c0002t0003g0227 a0001c0002t0003g0230 a0001c0002t0003g0233 a0001c0002t0003g0234 a0001c0002t0003g0235 a0001c0002t0003g0238 a0001c0002t0003g0240 a0001c0002t0003g0241 a0001c0002t0003g0242 a0001c0002t0003g0244 a0001c0002t0003g0245 a0001c0002t0003g0246 a0001c0002t0003g0247 a0001c0002t0003g0249 a0001c0002t0003g0250 a0001c0002t0003g0251 a0001c0002t0003g0252 a0001c0002t0003g0255 a0001c0002t0003g0256 a0001c0002t0003g0257 a0001c0002t0003g0263 a0001c0002t0003g0264 a0001c0002t0003g0271 a0001c0002t0003g0272 a0001c0002t0003g0273 a0001c0002t0003g0274 a0001c0002t0003g0275 a0001c0002t0003g0276 a0001c0003t0001g0179 a0001c0004t0002g0270 a0001c0004t0002g0311 a0001c0004t0002g0343 a0001c0004t0002g0345 a0001c0004t0002g0348 a0001c0004t0002g0350 a0001c0004t0002g0351 a0001c0004t0002g0353 a0001c0004t0002g0354 a0001c0004t0002g0355 a0001c0004t0002g0356 a0001c0004t0002g0357 a0001c0004t0002g0358 a0001c0004t0002g0362 a0001c0004t0002g0363 a0001c0004t0002g0364 a0001c0004t0002g0365 a0001c0004t0002g0368 a0001c0004t0002g0369 a0001c0004t0002g0375 a0001c0004t0002g0376 a0001c0004t0002g0377 a0001c0004t0011g0373 a0001c0008t0004g0053 a0001c0009t0004g0196 a0001c0009t0004g0201 a0001c0009t0004g0202 a0001c0009t0004g0203 a0001c0009t0004g0204 a0001c0009t0004g0205 a0001c0009t0004g0206 a0001c0009t0004g0207 a0001c0013t0003g0136 a0001c0013t0003g0137 a0001c0014t0002g0361 a0001c0014t0002g0371 a0001c0014t0003g0366 a0001c0014t0003g0367 a0001c0014t0003g0378 a0001c0021t0006g0289 a0001c0021t0006g0292 a0001c0021t0006g0303 a0001c0025t0002g0260 a0001c0025t0002g0267 a0001c0039t0003g0105 a0001c0059t0002g0223 a0001c0063t0002g0139 a0001c0066t0003g0216 a0001c0073t0002g0344 a0001c0075t0010g0352 a0001c0080t0002g0092 a0002c0018t0002g0019 a0002c0018t0002g0054 a0002c0018t0002g0262 a0002c0018t0002g0318 a0002c0019t0002g0015 a0002c0019t0002g0125 a0002c0019t0002g0126 a0002c0020t0002g0296 a0002c0020t0002g0300 a0002c0020t0002g0309 a0002c0020t0002g0310 a0002c0044t0002g0297 a0002c0049t0002g0194 a0006c0027t0002g0298 a0006c0027t0002g0299 a0006c0027t0002g0304 a0006c0048t0001g0198 a0011c0037t0003g0347 a0011c0037t0003g0359 a0012c0028t0001g0314 a0024c0046t0009g0195 a0027c0064t0003g0228 a0033c0069t0002g0232 a0037c0043t0001g0342	113	378	0.2989	29	c.283 others(46): Show c.2832+522_2832+523insGGGACGCGCGCAGGCACGTGCACGAACA C	CCDC40	ENSG00000141519.15	transcript	ENST00000397545.9	protein_coding	17/19		INFO_REALIGN_3_PRIME	chr17	TogoVar
CCDC40_chr17_80031642_80105613	80090432	C C	CACCACGG others(22): Show CACCACGGGACGCGCGCAGGCACGTGCACG	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02258.hp1 HG02818.hp2 others(3): Show HG01891.hp2 HG02258.hp1 HG02818.hp2 HG02886.hp2 HG03516.hp2 HG03540.hp2	a0008 a0010 a0023 a0008 a0010 a0023	a0008c0024 a0010c0035 a0023c0071 a0008c0024 a0010c0035 a0023c0071	a0008c0024t0002 a0010c0035t0002 a0023c0071t0002 a0008c0024t0002 a0010c0035t0002 a0023c0071t0002	a0008c0024t0002g0164 a0008c0024t0002g0165 a0008c0024t0002g0167 others(3): Show a0008c0024t0002g0164 a0008c0024t0002g0165 a0008c0024t0002g0167 a0010c0035t0002g0210 a0010c0035t0002g0211 a0023c0071t0002g0307	6	378	0.0159	29	c.283 others(46): Show c.2832+549_2832+550insCCACGGGACGCGCGCAGGCACGTGCACG A	CCDC40	ENSG00000141519.15	transcript	ENST00000397545.9	protein_coding	17/19		INFO_REALIGN_3_PRIME	chr17	TogoVar
CCDC57_chr17_82096470_82217842	82115301	A A	AGGGGGCA others(22): Show AGGGGGCAAGAGGGGGCAAGAGGGGGCAAG	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03540.hp2 HG03130.hp1 HG03540.hp2	a0013 a0013	a0013c0014 a0013c0014	a0013c0014t0001 a0013c0014t0001	a0013c0014t0001g0019 a0013c0014t0001g0020 a0013c0014t0001g0019 a0013c0014t0001g0020	2	252	0.0079	29	c.289 others(50): Show c.2899+12390_2899+12391insCTTGCCCCCTCTTGCCCCCTCTTG CCCCC	CCDC57	ENSG00000176155.21	transcript	ENST00000694881.1	protein_coding	18/18			chr17	TogoVar
CCDC60_chr12_119329729_119546040	119481964	C C	CATATATA others(22): Show CATATATATATAGTATATATATGTATATAT	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp2 HG02647.hp1 others(2): Show HG02615.hp1 HG02615.hp2 HG02647.hp1 HG02886.hp1 HG03453.hp2	a0001 a0002 a0009 a0001 a0002 a0009	a0001c0001 a0002c0002 a0009c0010 a0001c0001 a0002c0002 a0009c0010	a0001c0001t0001 a0001c0001t0003 a0002c0002t0002 others(1): Show a0001c0001t0001 a0001c0001t0003 a0002c0002t0002 a0009c0010t0001	a0001c0001t0001g0038 a0001c0001t0001g0183 a0001c0001t0003g0175 others(2): Show a0001c0001t0001g0038 a0001c0001t0001g0183 a0001c0001t0003g0175 a0002c0002t0002g0149 a0009c0010t0001g0073	5	256	0.0195	29	c.449 others(46): Show c.449+2768_449+2796dupATATATAGTATATATATGTATATATATA T	CCDC60	ENSG00000183273.7	transcript	ENST00000327554.3	protein_coding	4/13		INFO_REALIGN_3_PRIME	chr12	TogoVar
CCDC60_chr12_119329729_119546040	119482009	A A	ATATATAT others(22): Show ATATATATGTATATATATATGTATATATAG	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02818.hp2 HG02922.hp1 others(1): Show HG01243.hp2 HG02818.hp2 HG02922.hp1 HG03041.hp1	a0004 a0012 a0004 a0012	a0004c0004 a0012c0014 a0004c0004 a0012c0014	a0004c0004t0003 a0004c0004t0004 a0012c0014t0003 a0004c0004t0003 a0004c0004t0004 a0012c0014t0003	a0004c0004t0003g0251 a0004c0004t0004g0217 a0004c0004t0004g0221 others(1): Show a0004c0004t0003g0251 a0004c0004t0004g0217 a0004c0004t0004g0221 a0012c0014t0003g0066	4	256	0.0156	29	c.449 others(46): Show c.449+2815_449+2816insGTATATATATATGTATATATAGTATATA T	CCDC60	ENSG00000183273.7	transcript	ENST00000327554.3	protein_coding	4/13		INFO_REALIGN_3_PRIME	chr12	TogoVar
CCDC63_chr12_110841987_110912535	110906010	A A	AAATATAT others(22): Show AAATATATATTATATTATTATAATATATAT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00323.hp2 HG00735.hp1 others(40): Show HG00280.hp2 HG00323.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01123.hp1 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01255.hp2 HG01256.hp2 HG01257.hp2 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01891.hp1 HG01975.hp1 HG01978.hp2 HG02109.hp1 HG02148.hp2 HG02257.hp2 HG02273.hp1 HG02293.hp1 HG02293.hp2 HG02622.hp1 HG02647.hp1 HG02647.hp2 HG02723.hp1 HG02886.hp2 HG02922.hp2 HG03041.hp1 HG03139.hp1 HG03688.hp2 HG03704.hp1 HG03834.hp1 HG04115.hp2 NA19030.hp2 NA19043.hp2 NA20805.hp2 NA21309.hp1	a0001 a0004 a0006 others(1): Show a0001 a0004 a0006 a0015	a0001c0002 a0001c0011 a0004c0007 others(2): Show a0001c0002 a0001c0011 a0004c0007 a0006c0005 a0015c0019	a0001c0002t0001 a0001c0002t0002 a0001c0011t0001 others(4): Show a0001c0002t0001 a0001c0002t0002 a0001c0011t0001 a0004c0007t0002 a0004c0007t0003 a0006c0005t0002 a0015c0019t0002	a0001c0002t0001g0003 a0001c0002t0001g0004 a0001c0002t0001g0005 others(40): Show a0001c0002t0001g0003 a0001c0002t0001g0004 a0001c0002t0001g0005 a0001c0002t0001g0006 a0001c0002t0001g0007 a0001c0002t0001g0012 a0001c0002t0001g0013 a0001c0002t0001g0016 a0001c0002t0001g0019 a0001c0002t0001g0027 a0001c0002t0001g0030 a0001c0002t0001g0031 a0001c0002t0001g0032 a0001c0002t0001g0033 a0001c0002t0001g0038 a0001c0002t0001g0039 a0001c0002t0001g0046 a0001c0002t0001g0056 a0001c0002t0001g0079 a0001c0002t0001g0085 a0001c0002t0001g0086 a0001c0002t0001g0087 a0001c0002t0001g0089 a0001c0002t0001g0118 a0001c0002t0001g0123 a0001c0002t0001g0146 a0001c0002t0001g0148 a0001c0002t0001g0149 a0001c0002t0001g0150 a0001c0002t0001g0151 a0001c0002t0001g0152 a0001c0002t0001g0153 a0001c0002t0001g0156 a0001c0002t0001g0157 a0001c0002t0001g0182 a0001c0002t0002g0203 a0001c0002t0002g0214 a0001c0011t0001g0162 a0004c0007t0002g0252 a0004c0007t0003g0277 a0006c0005t0002g0248 a0006c0005t0002g0249 a0015c0019t0002g0188	43	288	0.1493	29	c.154 others(48): Show c.1546+1219_1546+1220insAATATATATTATATTATTATAATATA TAT	CCDC63	ENSG00000173093.13	transcript	ENST00000308208.10	protein_coding	11/11			chr12	TogoVar
CCDC63_chr12_110841987_110912535	110906048	A A	AATATATA others(22): Show AATATATATTATAATAATATAATATATAAT	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG02280.hp1 HG03130.hp1 HG01167.hp1 HG02280.hp1 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0240 a0001c0001t0004g0241 a0001c0001t0004g0242 a0001c0001t0004g0240 a0001c0001t0004g0241 a0001c0001t0004g0242	3	288	0.0104	29	c.154 others(48): Show c.1546+1265_1546+1266insTATAATAATATAATATATAATATATA TAT	CCDC63	ENSG00000173093.13	transcript	ENST00000308208.10	protein_coding	11/11		INFO_REALIGN_3_PRIME	chr12	TogoVar
CCDC65_chr12_48899133_48926576	48912437	C C	CAAAAAAA others(22): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03491.hp2 HG03491.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0275 a0001c0001t0001g0275	1	376	0.0027	29	c.301 others(46): Show c.301-1944_301-1943insAAAAAAAAAAAAAAAAAAAAAAAAAAAA A	CCDC65	ENSG00000139537.11	transcript	ENST00000320516.5	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr12	TogoVar
CCDC66_chr3_56552175_56626837	56556842	G G	GGGGGGGG others(22): Show GGGGGGGGGGGGGGGGGGGGGGGTGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01071.hp1 HG01071.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0008 a0002c0002t0002g0008	1	372	0.0027	29	c.-40 others(38): Show c.-401_-400insGGGGGGGGGGGGGGGGGGGGGGTGTGTGT	CCDC66	ENSG00000180376.17	transcript	ENST00000394672.8	protein_coding		332		chr3	TogoVar
CCDC66_chr3_56552175_56626837	56556842	G G	GGGGGGGG others(22): Show GGGGGGGGGGGGGGGGGGGGGTGTGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01070.hp1 HG01070.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0034 a0002c0002t0002g0034	1	372	0.0027	29	c.-40 others(38): Show c.-401_-400insGGGGGGGGGGGGGGGGGGGGTGTGTGTGT	CCDC66	ENSG00000180376.17	transcript	ENST00000394672.8	protein_coding		332		chr3	TogoVar
CCDC66_chr3_56552175_56626837	56556842	G G	GGGGGGGT others(22): Show GGGGGGGTGTGTGTGTGTGTGTGTGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18973.hp2 NA19060.hp2 NA18973.hp2 NA19060.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0001 a0003c0004t0004 a0001c0001t0001 a0003c0004t0004	a0001c0001t0001g0129 a0003c0004t0004g0232 a0001c0001t0001g0129 a0003c0004t0004g0232	2	372	0.0054	29	c.-40 others(38): Show c.-401_-400insGGGGGGTGTGTGTGTGTGTGTGTGTGTGT	CCDC66	ENSG00000180376.17	transcript	ENST00000394672.8	protein_coding		332		chr3	TogoVar
CCDC66_chr3_56552175_56626837	56556842	G G	GGGGGTGT others(22): Show GGGGGTGTGTGTGTGTGTGTGTGTGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03041.hp1 HG03516.hp1 NA19240.hp2 HG03041.hp1 HG03516.hp1 NA19240.hp2	a0001 a0010 a0001 a0010	a0001c0001 a0010c0025 a0001c0001 a0010c0025	a0001c0001t0001 a0001c0001t0010 a0010c0025t0001 a0001c0001t0001 a0001c0001t0010 a0010c0025t0001	a0001c0001t0001g0115 a0001c0001t0010g0124 a0010c0025t0001g0014 a0001c0001t0001g0115 a0001c0001t0010g0124 a0010c0025t0001g0014	3	372	0.0081	29	c.-40 others(38): Show c.-401_-400insGGGGTGTGTGTGTGTGTGTGTGTGTGTGT	CCDC66	ENSG00000180376.17	transcript	ENST00000394672.8	protein_coding		332		chr3	TogoVar
CCDC66_chr3_56552175_56626837	56597777	G G	GTTTTTTT others(22): Show GTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18951.hp2 NA19057.hp2 NA18951.hp2 NA19057.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0265 a0002c0002t0003g0274 a0002c0002t0003g0265 a0002c0002t0003g0274	2	372	0.0054	29	c.140 others(48): Show c.1404+3764_1404+3765insTTTTTTTTTTTTTTTTTTTTTTTTTT TTT	CCDC66	ENSG00000180376.17	transcript	ENST00000394672.8	protein_coding	10/17		INFO_REALIGN_3_PRIME	chr3	TogoVar
CCDC80_chr3_112591797_112646143	112603524	A A	ATATATAT others(22): Show ATATATATATATAATATATATTATATATTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA19066.hp1 NA19066.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0054 a0001c0001t0054	a0001c0001t0054g0161 a0001c0001t0054g0161	1	380	0.0026	29	c.18 others(40): Show c.1864_*1892dupAAATATATAATATATATTATATATATATA	CCDC80	ENSG00000091986.16	transcript	ENST00000206423.8	protein_coding	8/8	1892		chr3	TogoVar
CCDC88A_chr2_55282842_55424856	55367528	G G	GTTTTTTT others(22): Show GTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00741.hp2 HG01167.hp2 others(6): Show HG00099.hp2 HG00741.hp2 HG01167.hp2 HG01515.hp2 HG01517.hp1 HG01891.hp1 HG02809.hp1 HG03516.hp1 NA20752.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0002 a0001c0001t0016 a0001c0001t0017 others(1): Show a0001c0001t0002 a0001c0001t0016 a0001c0001t0017 a0003c0004t0014	a0001c0001t0002g0113 a0001c0001t0002g0118 a0001c0001t0016g0029 others(6): Show a0001c0001t0002g0113 a0001c0001t0002g0118 a0001c0001t0016g0029 a0001c0001t0017g0097 a0001c0001t0017g0103 a0003c0004t0014g0190 a0003c0004t0014g0191 a0003c0004t0014g0194 a0003c0004t0014g0195	9	316	0.0285	29	c.403 others(46): Show c.403-3496_403-3495insAAAAAAAAAAAAAAAAAAAAAAAAAAAA A	CCDC88A	ENSG00000115355.18	transcript	ENST00000436346.7	protein_coding	5/32			chr2	TogoVar
CCDC88A_chr2_55282842_55424856	55390053	A A	AAAAAAAA others(22): Show AAAAAAAAAAAAAAAAAAAAAAAAAAAAAG	intron_variant intron_variant	MODIFIER	HG02965.hp2 NA18978.hp2 HG02965.hp2 NA18978.hp2	a0001 a0001	a0001c0001 a0001c0014 a0001c0001 a0001c0014	a0001c0001t0001 a0001c0014t0001 a0001c0001t0001 a0001c0014t0001	a0001c0001t0001g0211 a0001c0014t0001g0305 a0001c0001t0001g0211 a0001c0014t0001g0305	2	316	0.0063	29	c.165 others(46): Show c.165-1168_165-1167insCTTTTTTTTTTTTTTTTTTTTTTTTTTT T	CCDC88A	ENSG00000115355.18	transcript	ENST00000436346.7	protein_coding	2/32			chr2	TogoVar
CCDC9B_chr15_40326452_40345939	40344824	C C	CAACTCTG others(22): Show CAACTCTGTTGTTCCAAGTCCCTCCCCCAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00735.hp2 HG00741.hp1 HG01106.hp2 others(7): Show HG00735.hp2 HG00741.hp1 HG01106.hp2 HG01167.hp2 HG01361.hp1 HG01516.hp1 HG01517.hp1 HG01978.hp2 HG02486.hp1 HG03669.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0012 a0003c0004t0012	a0003c0004t0012g0014 a0003c0004t0012g0033 a0003c0004t0012g0097 a0003c0004t0012g0014 a0003c0004t0012g0033 a0003c0004t0012g0097	10	422	0.0237	29	c.-40 others(40): Show c.-4006_-4005insTTGGGGGAGGGACTTGGAACAACAGAGTT	CCDC9B	ENSG00000188549.13	transcript	ENST00000397536.7	protein_coding		3886		chr15	TogoVar
CCL11_chr17_34280742_34293334	34292447	T T	TATATATA others(22): Show TATATATATATATATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00642.hp2 HG01106.hp2 HG01943.hp1 others(15): Show HG00642.hp2 HG01106.hp2 HG01943.hp1 HG02074.hp1 HG02273.hp2 HG03704.hp1 NA18942.hp1 NA18945.hp1 NA18956.hp2 NA18972.hp1 NA18973.hp2 NA18979.hp1 NA18979.hp2 NA19005.hp1 NA19057.hp2 NA19065.hp1 NA19080.hp1 NA19084.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0011 a0001c0001t0022	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0002g0003 others(3): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0002g0003 a0001c0001t0005g0002 a0001c0001t0011g0002 a0001c0001t0022g0002	18	448	0.0402	29	c.47 others(40): Show c.4757_*4758insATATATATATATATATATATATATATATA	CCL11	ENSG00000172156.4	transcript	ENST00000305869.4	protein_coding		4114		chr17	TogoVar
CCN4_chr8_133186039_133236690	133213842	A A	ATATACAC others(22): Show ATATACACTATATATAGTAGTTAAATATAC	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00558.hp2 HG01261.hp2 others(47): Show HG00408.hp1 HG00558.hp2 HG01261.hp2 HG01943.hp1 HG02015.hp1 HG02040.hp2 HG02129.hp2 HG02132.hp2 HG02698.hp1 HG02735.hp1 HG03471.hp1 HG03486.hp1 HG03491.hp2 HG03492.hp2 HG03669.hp1 HG03704.hp2 HG04184.hp2 NA18612.hp2 NA18948.hp1 NA18952.hp1 NA18960.hp2 NA18961.hp2 NA18962.hp2 NA18963.hp2 NA18964.hp1 NA18968.hp2 NA18969.hp2 NA18973.hp2 NA18974.hp1 NA18978.hp2 NA18981.hp2 NA18982.hp2 NA18984.hp1 NA18985.hp2 NA18988.hp2 NA18990.hp2 NA18994.hp1 NA18998.hp2 NA18999.hp2 NA19000.hp2 NA19002.hp2 NA19007.hp1 NA19010.hp2 NA19058.hp1 NA19066.hp1 NA19070.hp2 NA19077.hp2 NA19082.hp1 NA19085.hp1 NA20752.hp2	a0001 a0004 a0006 a0001 a0004 a0006	a0001c0001 a0001c0002 a0001c0020 others(2): Show a0001c0001 a0001c0002 a0001c0020 a0004c0019 a0006c0021	a0001c0001t0001 a0001c0001t0002 a0001c0001t0038 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0038 a0001c0002t0003 a0001c0020t0001 a0004c0019t0001 a0006c0021t0001	a0001c0001t0001g0007 a0001c0001t0001g0012 a0001c0001t0001g0014 others(43): Show a0001c0001t0001g0007 a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0027 a0001c0001t0001g0055 a0001c0001t0001g0073 a0001c0001t0001g0086 a0001c0001t0001g0105 a0001c0001t0001g0120 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0155 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0178 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0209 a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0226 a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0001g0231 a0001c0001t0001g0252 a0001c0001t0001g0268 a0001c0001t0002g0026 a0001c0001t0038g0208 a0001c0002t0003g0193 a0001c0020t0001g0361 a0004c0019t0001g0273 a0006c0021t0001g0132	50	396	0.1263	29	c.349 others(44): Show c.349+751_349+779dupAATATACTATACACTATATATAGTAGTTA	CCN4	ENSG00000104415.14	transcript	ENST00000250160.11	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr8	TogoVar
CCND2_chr12_4268762_4310353	4291234	T T	TGTGTGTG others(22): Show TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	NA18959.hp1 NA18964.hp2 NA18959.hp1 NA18964.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0129 a0001c0001t0001g0135 a0001c0001t0001g0129 a0001c0001t0001g0135	2	460	0.0044	29	c.720 others(46): Show c.720+2244_720+2245insGTGTGTGTGTGTGTGTGTGTGTGTGTGT G	CCND2	ENSG00000118971.9	transcript	ENST00000261254.8	protein_coding	4/4			chr12	TogoVar
CCNP_chr19_40217208_40231689	40228679	A A	ATATATAT others(22): Show ATATATATATATATATATATATATATATCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0004	1	414	0.0024	29	c.-20 others(40): Show c.-2039_-2038insAGATATATATATATATATATATATATATA	CCNP	ENSG00000105219.10	transcript	ENST00000430325.7	protein_coding		1991		chr19	TogoVar
CCNT2_chr2_134913822_134964342	134928274	C C	CTTTTTTT others(22): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03669.hp2 HG03669.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0267 a0001c0001t0004g0267	1	404	0.0025	29	c.240 others(46): Show c.240+8402_240+8403insTTTTTTTTTTTTTTTTTTTTTTTTTTTT T	CCNT2	ENSG00000082258.13	transcript	ENST00000264157.10	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
CCNYL1_chr2_207706640_207761174	207708084	C C	CTTTTTTT others(22): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0300 a0001c0001t0003g0300	1	354	0.0028	29	c.-38 others(40): Show c.-3813_-3812insTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	CCNYL1	ENSG00000163249.13	transcript	ENST00000295414.8	protein_coding		3555		chr2	TogoVar
CCNY_chr10_35331509_35577667	35419533	C C	CTTTTTTT others(22): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0028 a0001c0001t0002g0028	1	296	0.0034	29	c.155 others(48): Show c.155-63856_155-63855insTTTTTTTTTTTTTTTTTTTTTTTTTT TTT	CCNY	ENSG00000108100.18	transcript	ENST00000374704.8	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCR6_chr6_167118096_167144141	167130978	C C	CCTCCCTC others(22): Show CCTCCCTCTGACCCCCTCCCTCTGGGACCT	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG03139.hp2 HG03209.hp1 HG01109.hp1 HG03139.hp2 HG03209.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0005 a0001c0001 a0001c0003 a0002c0005	a0001c0001t0019 a0001c0003t0004 a0002c0005t0026 a0001c0001t0019 a0001c0003t0004 a0002c0005t0026	a0001c0001t0019g0261 a0001c0003t0004g0064 a0002c0005t0026g0060 a0001c0001t0019g0261 a0001c0003t0004g0064 a0002c0005t0026g0060	3	460	0.0065	29	c.-97 others(46): Show c.-97-5051_-97-5050insACCCCCTCCCTCTGGGACCTCTCCCTCT G	CCR6	ENSG00000112486.18	transcript	ENST00000341935.10	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr6	TogoVar
CCR8_chr3_39324709_39338680	39337242	A A	AATATATA others(22): Show AATATATATTATATATATATATATATTTAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18941.hp1 NA18941.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	398	0.0025	29	c.38 others(40): Show c.3843_*3844insATATATATTATATATATATATATATTTAT	CCR8	ENSG00000179934.7	transcript	ENST00000326306.5	protein_coding		3563		chr3	TogoVar
CCR8_chr3_39324709_39338680	39337257	T T	TATATATA others(22): Show TATATATATATATATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02015.hp1 HG02015.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	398	0.0025	29	c.38 others(40): Show c.3858_*3859insATATATATATATATATATATATATATATA	CCR8	ENSG00000179934.7	transcript	ENST00000326306.5	protein_coding		3578		chr3	TogoVar
CCR9_chr3_45881543_45908174	45890306	T T	TATATATA others(22): Show TATATATATTTATATAAATATATATATAAC	intron_variant intron_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0007 a0001c0006t0007	a0001c0006t0007g0146 a0001c0006t0007g0146	1	424	0.0024	29	c.-29 others(46): Show c.-29+3659_-29+3660insTTATATAAATATATATATAACATATATA T	CCR9	ENSG00000173585.18	transcript	ENST00000357632.7	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr3	TogoVar
CCSAP_chr1_229316015_229348047	229337678	A A	AAAAAAAA others(22): Show AAAAAAAAAAAAAAAAAAAAAAAAAAATAT	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01167.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0062 a0001c0001t0001g0062	1	436	0.0023	29	c.367 others(46): Show c.367+4420_367+4421insATATTTTTTTTTTTTTTTTTTTTTTTTT T	CCSAP	ENSG00000154429.11	transcript	ENST00000284617.7	protein_coding	2/3			chr1	TogoVar
CCSAP_chr1_229316015_229348047	229337678	A A	AAAAAAAA others(22): Show AAAAAAAAAAAAAAAAAAAAAAATATATAT	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0001 a0002c0004t0001	a0002c0004t0001g0042 a0002c0004t0001g0042	1	436	0.0023	29	c.367 others(46): Show c.367+4420_367+4421insATATATATTTTTTTTTTTTTTTTTTTTT T	CCSAP	ENSG00000154429.11	transcript	ENST00000284617.7	protein_coding	2/3			chr1	TogoVar
CCSER1_chr4_90122394_91610295	90147142	A A	ATGTGTAA others(22): Show ATGTGTAAGACACTTTACTGTGTCTTTCTG	intron_variant intron_variant	MODIFIER	HG03017.hp1 HG03017.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0016 a0001c0001t0001g0016	1	38	0.0263	29	c.-42 others(48): Show c.-42+19357_-42+19385dupCTGTGTCTTTCTGTGTGTAAGACACT TTA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90648284	G G	GGAAAGAA others(22): Show GGAAAGAAAGAAAGAAAGGAAAGAAAGAAA	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG03516.hp2 HG02258.hp1 HG03516.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0004 a0001c0001 a0004c0004	a0001c0001t0001 a0004c0004t0004 a0001c0001t0001 a0004c0004t0004	a0001c0001t0001g0024 a0004c0004t0004g0018 a0001c0001t0001g0024 a0004c0004t0004g0018	2	38	0.0526	29	c.193 others(50): Show c.1932+20069_1932+20070insGAAAGAAAGAAAGAAAGAAAGAAA GAAAG	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	6/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	91059314	A A	ATATATAT others(22): Show ATATATATACATATAGTGTATATATATGTG	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01192.hp1 HG01884.hp2 others(4): Show HG01099.hp1 HG01192.hp1 HG01884.hp2 HG02258.hp1 HG02258.hp2 HG03239.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 a0001c0001t0011 a0001c0001t0014 a0001c0003t0002	a0001c0001t0001g0024 a0001c0001t0002g0027 a0001c0001t0005g0017 others(4): Show a0001c0001t0001g0024 a0001c0001t0002g0027 a0001c0001t0005g0017 a0001c0001t0006g0023 a0001c0001t0011g0003 a0001c0001t0014g0028 a0001c0003t0002g0026	7	38	0.1842	29	c.217 others(50): Show c.2173-26625_2173-26597dupTATAGTGTATATATATGTGTATAT ATACA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	9/10		INFO_REALIGN_3_PRIME	chr4	TogoVar

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