Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LHX3_chr9_136191250_136210128	136208291	T T	TGGAGGGT others(22): Show TGGAGGGTGCAGGGAGGGCCAAGGTGGGGC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	438	0.0023	29	c.-32 others(40): Show c.-3280_-3279insGCCCCACCTTGGCCCTCCCTGCACCCTCC	LHX3	ENSG00000107187.17	transcript	ENST00000371748.10	protein_coding		3164		chr9	TogoVar
LHX3_chr9_136191250_136210128	136208291	T T	TGGAGGGT others(22): Show TGGAGGGTGCAGGGAGGGCCAAGGTGGGGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00408.hp2 HG00558.hp1 others(108): Show HG00099.hp1 HG00408.hp2 HG00558.hp1 HG00597.hp2 HG00621.hp1 HG00673.hp2 HG01069.hp2 HG01071.hp2 HG01106.hp2 HG01123.hp2 HG01243.hp1 HG01256.hp1 HG01258.hp1 HG01258.hp2 HG01346.hp2 HG01433.hp1 HG01433.hp2 HG01891.hp2 HG01928.hp1 HG01943.hp2 HG01975.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02074.hp2 HG02080.hp1 HG02109.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp2 HG02300.hp2 HG02602.hp2 HG02630.hp1 HG02723.hp2 HG02738.hp1 HG02895.hp1 HG03017.hp1 HG03041.hp1 HG03139.hp2 HG03225.hp1 HG03492.hp1 HG03654.hp1 HG03654.hp2 HG03704.hp1 HG03834.hp1 HG04115.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp2 NA18940.hp2 NA18941.hp1 NA18942.hp2 NA18943.hp2 NA18946.hp1 NA18948.hp2 NA18953.hp2 NA18955.hp1 NA18955.hp2 NA18960.hp1 NA18960.hp2 NA18962.hp2 NA18963.hp1 NA18968.hp1 NA18969.hp2 NA18971.hp1 NA18979.hp2 NA18980.hp1 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18984.hp2 NA18990.hp1 NA18994.hp1 NA18999.hp1 NA18999.hp2 NA19001.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19004.hp2 NA19005.hp2 NA19007.hp2 NA19009.hp2 NA19010.hp2 NA19011.hp2 NA19043.hp1 NA19054.hp2 NA19056.hp1 NA19056.hp2 NA19060.hp2 NA19065.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19070.hp1 NA19077.hp1 NA19080.hp2 NA19087.hp2 NA19088.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0004 others(3): Show a0001c0001 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0008	a0001c0001t0001 a0001c0001t0005 a0001c0001t0008 others(7): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0008 a0001c0001t0009 a0001c0001t0012 a0001c0003t0001 a0001c0004t0001 a0001c0005t0001 a0001c0006t0001 a0001c0008t0001	a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0006 others(37): Show a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0011 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0024 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0038 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0046 a0001c0001t0001g0053 a0001c0001t0001g0069 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0082 a0001c0001t0001g0090 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0109 a0001c0001t0001g0121 a0001c0001t0005g0020 a0001c0001t0005g0066 a0001c0001t0005g0079 a0001c0001t0005g0093 a0001c0001t0005g0095 a0001c0001t0008g0039 a0001c0001t0009g0089 a0001c0001t0012g0088 a0001c0003t0001g0047 a0001c0004t0001g0084 a0001c0005t0001g0085 a0001c0006t0001g0092 a0001c0008t0001g0122	111	438	0.2534	29	c.-32 others(40): Show c.-3280_-3279insCCCCCACCTTGGCCCTCCCTGCACCCTCC	LHX3	ENSG00000107187.17	transcript	ENST00000371748.10	protein_coding		3164		chr9	TogoVar
LIFR_chr5_38469668_38561646	38517856	C C	CAAAAAAA others(22): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01257.hp2 HG01981.hp2 HG04204.hp1 others(1): Show HG01257.hp2 HG01981.hp2 HG04204.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0227 a0001c0001t0001g0233 a0001c0001t0001g0234 others(1): Show a0001c0001t0001g0227 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0254	4	374	0.0107	29	c.561 others(46): Show c.561+5562_561+5563insTTTTTTTTTTTTTTTTTTTTTTTTTTTT T	LIFR	ENSG00000113594.10	transcript	ENST00000453190.7	protein_coding	5/19			chr5	TogoVar
LIMD1_chr3_45589751_45691341	45594791	A A	ACACACAC others(22): Show ACACACACACACACACACACACACACACAC	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02155.hp1 HG02155.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0149 a0001c0001t0149	a0001c0001t0149g0048 a0001c0001t0149g0048	1	358	0.0028	29	c.-88 others(36): Show c.-88_-60dupCACACACACACACACACACACACACACAC	LIMD1	ENSG00000144791.10	transcript	ENST00000273317.5	protein_coding	1/8	59	INFO_REALIGN_3_PRIME	chr3	TogoVar
LIMD1_chr3_45589751_45691341	45686663	A A	ATATATAT others(22): Show ATATATATATATATATATATATATTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp2 HG00639.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0136 a0001c0002t0136	a0001c0002t0136g0324 a0001c0002t0136g0324	1	358	0.0028	29	c.96 others(40): Show c.9604_*9605insTATATATATATATATATATATATTTTTTT	LIMD1	ENSG00000144791.10	transcript	ENST00000273317.5	protein_coding		323		chr3	TogoVar
LIMD1_chr3_45589751_45691341	45686663	A A	ATATATAT others(22): Show ATATATATATATATATATATATTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01175.hp2 HG03579.hp1 HG01175.hp2 HG03579.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0025 a0001c0003t0137 a0001c0002t0025 a0001c0003t0137	a0001c0002t0025g0338 a0001c0003t0137g0154 a0001c0002t0025g0338 a0001c0003t0137g0154	2	358	0.0056	29	c.96 others(40): Show c.9604_*9605insTATATATATATATATATATATTTTTTTTT	LIMD1	ENSG00000144791.10	transcript	ENST00000273317.5	protein_coding		323		chr3	TogoVar
LIMD1_chr3_45589751_45691341	45686663	A A	ATATATAT others(22): Show ATATATATATATATATATTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA20805.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0143 a0001c0001t0143	a0001c0001t0143g0265 a0001c0001t0143g0265	1	358	0.0028	29	c.96 others(40): Show c.9604_*9605insTATATATATATATATATTTTTTTTTTTTT	LIMD1	ENSG00000144791.10	transcript	ENST00000273317.5	protein_coding		323		chr3	TogoVar
LIMD1_chr3_45589751_45691341	45686663	A A	ATATATTT others(22): Show ATATATTTTTTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0046 a0001c0001t0046	a0001c0001t0046g0019 a0001c0001t0046g0019	1	358	0.0028	29	c.96 others(40): Show c.9604_*9605insTATATTTTTTTTTTTTTTTTTTTTTTTTT	LIMD1	ENSG00000144791.10	transcript	ENST00000273317.5	protein_coding		323		chr3	TogoVar
LIMK1_chr7_74078804_74127525	74102484	C C	CTTTTTTT others(22): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02129.hp1 HG02698.hp2 NA19000.hp1 HG02129.hp1 HG02698.hp2 NA19000.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0158 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0158	3	302	0.0099	29	c.608 others(46): Show c.608+3264_608+3265insTTTTTTTTTTTTTTTTTTTTTTTTTTTT T	LIMK1	ENSG00000106683.15	transcript	ENST00000336180.7	protein_coding	5/15		INFO_REALIGN_3_PRIME	chr7	TogoVar
LIMK2_chr22_31207298_31285080	31257040	A A	ATTTTTTT others(22): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00280.hp2 NA19010.hp2 HG00280.hp2 NA19010.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0005 a0001c0003t0003 a0001c0003t0005	a0001c0003t0003g0171 a0001c0003t0005g0160 a0001c0003t0003g0171 a0001c0003t0005g0160	2	358	0.0056	29	c.117 others(46): Show c.117-1245_117-1217dupTTTTTTTTTTTTTTTTTTTTTTTTTTTT T	LIMK2	ENSG00000182541.18	transcript	ENST00000331728.9	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr22	TogoVar
LIMK2_chr22_31207298_31285080	31283114	A A	ACCCCCCC others(22): Show ACCCCCCCCCCCCCCCCCCCCCCCCCCCCC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp1 HG00280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0293 a0001c0001t0001g0293	1	358	0.0028	29	c.46 others(40): Show c.4673_*4674insCCCCCCCCCCCCCCCCCCCCCCCCCCCCC	LIMK2	ENSG00000182541.18	transcript	ENST00000331728.9	protein_coding		3035		chr22	TogoVar
LIN28A_chr1_26405817_26434728	26406083	T T	TATATAGT others(22): Show TATATAGTCTCCTTCCAGTCTTTTTGTCTG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18968.hp1 NA18968.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0078 a0001c0001t0001g0078	1	376	0.0027	29	c.-48 others(40): Show c.-4809_-4808insATATAGTCTCCTTCCAGTCTTTTTGTCTG	LIN28A	ENSG00000131914.11	transcript	ENST00000326279.11	protein_coding		4733		chr1	TogoVar
LIN52_chr14_74079956_74206493	74130278	G G	GTTTGTTT others(22): Show GTTTGTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0090 a0001c0001t0015g0090	1	354	0.0028	29	c.283 others(48): Show c.283+29043_283+29044insGTTTTTTTTTTTTTTTTTTTTTTTTT TTT	LIN52	ENSG00000205659.12	transcript	ENST00000555028.7	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LIN52_chr14_74079956_74206493	74130278	G G	GTTTTTTT others(22): Show GTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0037 a0001c0001t0037	a0001c0001t0037g0091 a0001c0001t0037g0091	1	354	0.0028	29	c.283 others(48): Show c.283+29058_283+29059insTTTTTTTTTTTTTTTTTTTTTTTTTT TTT	LIN52	ENSG00000205659.12	transcript	ENST00000555028.7	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LIN54_chr4_82919603_83015823	83001858	A A	AAAAGGAA others(22): Show AAAAGGAAAGAAAGAAAGAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG00642.hp1 HG00733.hp1 others(11): Show HG00621.hp1 HG00642.hp1 HG00733.hp1 HG00735.hp1 HG00741.hp1 HG02602.hp2 HG02717.hp1 HG02717.hp2 HG03688.hp2 NA18945.hp2 NA18952.hp2 NA19043.hp2 NA19056.hp2 NA19066.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0012 a0001c0001t0001 a0001c0001t0012	a0001c0001t0001g0009 a0001c0001t0001g0017 a0001c0001t0001g0024 others(11): Show a0001c0001t0001g0009 a0001c0001t0001g0017 a0001c0001t0001g0024 a0001c0001t0001g0036 a0001c0001t0001g0044 a0001c0001t0001g0053 a0001c0001t0001g0063 a0001c0001t0001g0072 a0001c0001t0001g0097 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0118 a0001c0001t0001g0123 a0001c0001t0012g0043	14	304	0.0461	29	c.-33 others(46): Show c.-33+8625_-33+8626insCTTTCTTTCTTTCTTTCTTTCTTTCCTT T	LIN54	ENSG00000189308.11	transcript	ENST00000340417.8	protein_coding	1/12			chr4	TogoVar
LIN54_chr4_82919603_83015823	83001858	A A	AAAAGGAA others(22): Show AAAAGGAAGGAAAGAAAGAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	NA20905.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0049 a0001c0001t0001g0049	1	304	0.0033	29	c.-33 others(46): Show c.-33+8625_-33+8626insCTTTCTTTCTTTCTTTCTTTCCTTCCTT T	LIN54	ENSG00000189308.11	transcript	ENST00000340417.8	protein_coding	1/12			chr4	TogoVar
LIN54_chr4_82919603_83015823	83001866	G G	GAAAGAAA others(22): Show GAAAGAAAGAAAGAAAGAAAGAAGAAGAAA	intron_variant intron_variant	MODIFIER	NA19084.hp2 NA19084.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0065 a0001c0001t0001g0065	1	304	0.0033	29	c.-33 others(46): Show c.-33+8617_-33+8618insTTTCTTCTTCTTTCTTTCTTTCTTTCTT T	LIN54	ENSG00000189308.11	transcript	ENST00000340417.8	protein_coding	1/12			chr4	TogoVar
LIN7A_chr12_80787520_80942934	80882287	C C	CTTTTTTT others(22): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02015.hp1 HG02109.hp1 HG02015.hp1 HG02109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0262 a0001c0001t0001g0266 a0001c0001t0001g0262 a0001c0001t0001g0266	2	292	0.0069	29	c.201 others(46): Show c.201+6963_201+6964insAAAAAAAAAAAAAAAAAAAAAAAAAAAA A	LIN7A	ENSG00000111052.8	transcript	ENST00000552864.6	protein_coding	2/5			chr12	TogoVar
LIN9_chr1_226226157_226314164	226260628	G G	GTTTTTTT others(22): Show GTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0307 a0001c0001t0001g0307	1	364	0.0028	29	c.103 others(48): Show c.1038+4876_1038+4904dupAAAAAAAAAAAAAAAAAAAAAAAAAA AAA	LIN9	ENSG00000183814.16	transcript	ENST00000681046.1	protein_coding	10/14			chr1	TogoVar
LINGO2_chr9_27932617_29218601	28848061	A A	ATATACTA others(22): Show ATATACTATATACACACTATATATAGTGTG	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00438.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0025 a0001c0001t0003g0025	1	62	0.0161	29	c.-39 others(50): Show c.-395+99756_-395+99757insCACACTATATATAGTGTGTATATA GTATA	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	2/6			chr9	TogoVar
LIPG_chr18_49557057_49604185	49579044	G G	GGGAGAGG others(22): Show GGGAGAGGGAGAGGGAGAGGGAGAGGGAGA	intron_variant intron_variant	MODIFIER	HG03239.hp2 HG03239.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0072 a0001c0001t0012g0072	1	384	0.0026	29	c.794 others(46): Show c.794-2368_794-2340dupAGAGGGAGAGGGAGAGGGAGAGGGAGAG G	LIPG	ENSG00000101670.12	transcript	ENST00000261292.9	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr18	TogoVar
LIPI_chr21_14103813_14215955	14161622	A A	AATATATT others(22): Show AATATATTAATATATAATATACATATTATT	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG03453.hp1 HG03540.hp2 HG01884.hp2 HG03453.hp1 HG03540.hp2	a0004 a0005 a0004 a0005	a0004c0003 a0005c0004 a0004c0003 a0005c0004	a0004c0003t0001 a0005c0004t0002 a0004c0003t0001 a0005c0004t0002	a0004c0003t0001g0086 a0004c0003t0001g0087 a0005c0004t0002g0088 a0004c0003t0001g0086 a0004c0003t0001g0087 a0005c0004t0002g0088	3	362	0.0083	29	c.100 others(48): Show c.1006+1796_1006+1797insAATAATATGTATATTATATATTAATA TAT	LIPI	ENSG00000188992.12	transcript	ENST00000681601.1	protein_coding	7/9			chr21	TogoVar
LIPI_chr21_14103813_14215955	14161839	A A	ATATATAC others(22): Show ATATATACATTATTATATATTAATGTATAT	intron_variant intron_variant	MODIFIER	HG02258.hp1 NA19030.hp1 HG02258.hp1 NA19030.hp1	a0002 a0005 a0002 a0005	a0002c0002 a0005c0004 a0002c0002 a0005c0004	a0002c0002t0002 a0005c0004t0002 a0002c0002t0002 a0005c0004t0002	a0002c0002t0002g0038 a0005c0004t0002g0039 a0002c0002t0002g0038 a0005c0004t0002g0039	2	362	0.0055	29	c.100 others(48): Show c.1006+1579_1006+1580insATATACATTAATATATAATAATGTAT ATA	LIPI	ENSG00000188992.12	transcript	ENST00000681601.1	protein_coding	7/9			chr21	TogoVar
LIPM_chr10_88797730_88825546	88822544	C C	CTTTTTTT others(22): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03490.hp1 HG03492.hp1 NA18992.hp1 others(1): Show HG03490.hp1 HG03492.hp1 NA18992.hp1 NA19000.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0020 a0001c0001t0001g0046 a0001c0001t0001g0098 a0001c0001t0001g0020 a0001c0001t0001g0046 a0001c0001t0001g0098	4	462	0.0087	29	c.20 others(40): Show c.2043_*2044insTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	LIPM	ENSG00000173239.14	transcript	ENST00000404743.9	protein_coding		1999		chr10	TogoVar
LIPM_chr10_88797730_88825546	88823827	C C	CAAAAAAA others(22): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02647.hp1 HG03209.hp1 HG02647.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0075 a0001c0001t0001g0230 a0001c0001t0001g0075 a0001c0001t0001g0230	2	462	0.0043	29	c.33 others(40): Show c.3326_*3327insAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	LIPM	ENSG00000173239.14	transcript	ENST00000404743.9	protein_coding		3282		chr10	TogoVar
LITAF_chr16_11542722_11591919	11576554	A A	AAAAAAAA others(22): Show AAAAAAAAAAAAAAAAAAAAAAAAAAAGAC	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0267 a0001c0001t0003g0267	1	412	0.0024	29	c.-6+ others(46): Show c.-6+10331_-6+10332insGTCTTTTTTTTTTTTTTTTTTTTTTTTT T	LITAF	ENSG00000189067.14	transcript	ENST00000622633.5	protein_coding	1/3			chr16	TogoVar
LMAN2_chr5_177326567_177356668	177330025	A A	ATGGGACC others(22): Show ATGGGACCTTTAACACCTGCTGCCACAGCG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp1 HG02965.hp2 HG01243.hp1 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0242 a0001c0001t0001g0243 a0001c0001t0001g0242 a0001c0001t0001g0243	2	376	0.0053	29	c.20 others(40): Show c.2032_*2060dupCGCTGTGGCAGCAGGTGTTAAAGGTCCCA	LMAN2	ENSG00000169223.16	transcript	ENST00000303127.12	protein_coding		1541		chr5	TogoVar
LMF1_chr16_848634_975984	975977	G G	GCAAGGAG others(22): Show GCAAGGAGCCTCATGAACTCTGTGGACATT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00140.hp2 others(153): Show HG00099.hp1 HG00140.hp1 HG00140.hp2 HG00280.hp2 HG00323.hp2 HG00423.hp1 HG00544.hp2 HG00558.hp1 HG00597.hp2 HG00621.hp2 HG00738.hp2 HG00741.hp2 HG01069.hp1 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01099.hp2 HG01106.hp2 HG01109.hp1 HG01123.hp2 HG01168.hp1 HG01192.hp2 HG01243.hp1 HG01258.hp2 HG01361.hp1 HG01361.hp2 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01934.hp2 HG01952.hp2 HG01978.hp1 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02027.hp1 HG02055.hp1 HG02055.hp2 HG02056.hp2 HG02074.hp2 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02135.hp2 HG02145.hp2 HG02148.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02622.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02723.hp2 HG02738.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02896.hp1 HG02896.hp2 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03453.hp2 HG03486.hp1 HG03490.hp2 HG03492.hp2 HG03516.hp1 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18612.hp2 NA18943.hp1 NA18944.hp1 NA18946.hp2 NA18947.hp1 NA18948.hp2 NA18950.hp2 NA18951.hp1 NA18952.hp2 NA18964.hp2 NA18966.hp2 NA18967.hp1 NA18970.hp2 NA18973.hp1 NA18975.hp1 NA18982.hp1 NA18983.hp2 NA18990.hp1 NA18995.hp1 NA18995.hp2 NA19002.hp2 NA19004.hp1 NA19009.hp1 NA19010.hp2 NA19011.hp1 NA19012.hp1 NA19043.hp2 NA19064.hp2 NA19068.hp1 NA19068.hp2 NA19077.hp1 NA19088.hp1 NA19091.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp2 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(13): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008 a0009 a0011 a0012 a0013 a0014 a0017 a0021 a0022	a0001c0001 a0001c0002 a0001c0003 others(45): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0008 a0001c0010 a0001c0012 a0001c0013 a0001c0018 a0001c0020 a0001c0022 a0001c0023 a0001c0033 a0001c0041 a0001c0044 a0001c0060 a0001c0067 a0002c0007 a0002c0016 a0002c0017 a0002c0035 a0002c0052 a0002c0054 a0003c0014 a0003c0015 a0003c0030 a0004c0025 a0004c0043 a0005c0019 a0005c0027 a0006c0021 a0006c0048 a0006c0049 a0007c0028 a0007c0046 a0008c0036 a0008c0045 a0009c0024 a0011c0038 a0011c0039 a0012c0031 a0013c0037 a0014c0040 a0017c0050 a0021c0062 a0022c0042	a0001c0001t0001 a0001c0001t0019 a0001c0002t0001 others(56): Show a0001c0001t0001 a0001c0001t0019 a0001c0002t0001 a0001c0002t0006 a0001c0003t0001 a0001c0004t0001 a0001c0004t0004 a0001c0004t0005 a0001c0004t0016 a0001c0005t0001 a0001c0005t0012 a0001c0006t0001 a0001c0006t0002 a0001c0008t0001 a0001c0008t0002 a0001c0010t0001 a0001c0012t0001 a0001c0012t0018 a0001c0013t0001 a0001c0013t0014 a0001c0018t0001 a0001c0020t0001 a0001c0022t0001 a0001c0023t0001 a0001c0033t0001 a0001c0041t0001 a0001c0044t0001 a0001c0060t0002 a0001c0067t0001 a0002c0007t0001 a0002c0016t0001 a0002c0017t0001 a0002c0035t0001 a0002c0052t0001 a0002c0054t0001 a0003c0014t0001 a0003c0015t0001 a0003c0030t0002 a0004c0025t0007 a0004c0043t0003 a0005c0019t0001 a0005c0027t0001 a0006c0021t0001 a0006c0021t0006 a0006c0048t0006 a0006c0049t0001 a0007c0028t0004 a0007c0046t0004 a0008c0036t0003 a0008c0045t0003 a0009c0024t0001 a0011c0038t0001 a0011c0039t0002 a0012c0031t0001 a0013c0037t0005 a0014c0040t0004 a0017c0050t0001 a0021c0062t0008 a0022c0042t0001	a0001c0001t0001g0024 a0001c0001t0001g0103 a0001c0001t0001g0104 others(153): Show a0001c0001t0001g0024 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0247 a0001c0001t0001g0249 a0001c0001t0001g0251 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0254 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0260 a0001c0001t0001g0261 a0001c0001t0019g0258 a0001c0002t0001g0021 a0001c0002t0001g0026 a0001c0002t0001g0027 a0001c0002t0001g0028 a0001c0002t0001g0029 a0001c0002t0001g0033 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0042 a0001c0002t0001g0044 a0001c0002t0001g0048 a0001c0002t0001g0049 a0001c0002t0001g0057 a0001c0002t0001g0058 a0001c0002t0001g0059 a0001c0002t0001g0062 a0001c0002t0001g0063 a0001c0002t0001g0064 a0001c0002t0001g0066 a0001c0002t0001g0073 a0001c0002t0001g0086 a0001c0002t0001g0093 a0001c0002t0001g0095 a0001c0002t0006g0050 a0001c0003t0001g0102 a0001c0003t0001g0124 a0001c0003t0001g0250 a0001c0004t0001g0053 a0001c0004t0001g0054 a0001c0004t0001g0061 a0001c0004t0001g0065 a0001c0004t0001g0067 a0001c0004t0001g0075 a0001c0004t0001g0077 a0001c0004t0001g0087 a0001c0004t0001g0089 a0001c0004t0001g0091 a0001c0004t0004g0030 a0001c0004t0005g0078 a0001c0004t0016g0025 a0001c0005t0001g0037 a0001c0005t0001g0047 a0001c0005t0001g0080 a0001c0005t0001g0109 a0001c0005t0001g0111 a0001c0005t0001g0112 a0001c0005t0001g0113 a0001c0005t0001g0116 a0001c0005t0001g0248 a0001c0005t0012g0110 a0001c0006t0001g0055 a0001c0006t0001g0082 a0001c0006t0001g0092 a0001c0006t0001g0284 a0001c0006t0001g0285 a0001c0006t0001g0286 a0001c0006t0001g0287 a0001c0006t0002g0282 a0001c0006t0002g0283 a0001c0008t0001g0023 a0001c0008t0001g0052 a0001c0008t0001g0069 a0001c0008t0001g0074 a0001c0008t0001g0079 a0001c0008t0001g0090 a0001c0008t0002g0071 a0001c0010t0001g0115 a0001c0010t0001g0271 a0001c0010t0001g0272 a0001c0010t0001g0273 a0001c0010t0001g0276 a0001c0010t0001g0279 a0001c0012t0001g0085 a0001c0012t0001g0094 a0001c0012t0001g0097 a0001c0012t0001g0098 a0001c0012t0001g0101 a0001c0012t0018g0035 a0001c0013t0001g0043 a0001c0013t0001g0045 a0001c0013t0001g0046 a0001c0013t0014g0022 a0001c0018t0001g0242 a0001c0020t0001g0099 a0001c0020t0001g0100 a0001c0022t0001g0268 a0001c0023t0001g0244 a0001c0023t0001g0246 a0001c0033t0001g0275 a0001c0041t0001g0088 a0001c0044t0001g0034 a0001c0060t0002g0128 a0001c0067t0001g0056 a0002c0007t0001g0120 a0002c0016t0001g0068 a0002c0016t0001g0070 a0002c0016t0001g0076 a0002c0017t0001g0038 a0002c0017t0001g0081 a0002c0017t0001g0096 a0002c0035t0001g0280 a0002c0052t0001g0018 a0002c0054t0001g0114 a0003c0014t0001g0009 a0003c0014t0001g0010 a0003c0014t0001g0015 a0003c0014t0001g0016 a0003c0015t0001g0011 a0003c0015t0001g0013 a0003c0015t0001g0014 a0003c0030t0002g0008 a0004c0025t0007g0259 a0004c0025t0007g0294 a0004c0043t0003g0119 a0005c0019t0001g0060 a0005c0019t0001g0083 a0005c0027t0001g0127 a0006c0021t0001g0020 a0006c0021t0006g0019 a0006c0048t0006g0108 a0006c0049t0001g0243 a0007c0028t0004g0017 a0007c0046t0004g0036 a0008c0036t0003g0277 a0008c0045t0003g0072 a0009c0024t0001g0117 a0009c0024t0001g0118 a0011c0038t0001g0245 a0011c0039t0002g0264 a0012c0031t0001g0012 a0013c0037t0005g0278 a0014c0040t0004g0270 a0017c0050t0001g0051 a0021c0062t0008g0212 a0022c0042t0001g0084	156	294	0.5306	29	c.-49 others(40): Show c.-4998_-4997insAATGTCCACAGAGTTCATGAGGCTCCTTG	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding		4994		chr16	TogoVar
LMNB1_chr5_126772136_126842020	126787437	A A	ATATGTAT others(22): Show ATATGTATATGTTATATATAACATATACTT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00280.hp2 HG00558.hp2 others(54): Show HG00280.hp1 HG00280.hp2 HG00558.hp2 HG00597.hp1 HG01069.hp2 HG01071.hp1 HG01099.hp2 HG01123.hp1 HG01169.hp2 HG01256.hp1 HG01361.hp1 HG01884.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp2 HG02004.hp1 HG02027.hp1 HG02148.hp1 HG02523.hp2 HG02559.hp1 HG02698.hp2 HG02735.hp1 HG02738.hp1 HG02976.hp1 HG03239.hp1 HG03710.hp2 HG03927.hp1 NA18948.hp1 NA18953.hp2 NA18964.hp1 NA18966.hp2 NA18968.hp1 NA18970.hp2 NA18971.hp1 NA18973.hp2 NA18977.hp1 NA18980.hp1 NA18982.hp1 NA18983.hp2 NA18995.hp1 NA18997.hp1 NA19003.hp1 NA19007.hp1 NA19009.hp1 NA19011.hp1 NA19055.hp1 NA19056.hp1 NA19065.hp1 NA19068.hp1 NA19070.hp2 NA19075.hp2 NA19079.hp2 NA19082.hp2 NA19091.hp2 NA20300.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0001 a0001c0001t0002 a0001c0007t0001 a0001c0001t0001 a0001c0001t0002 a0001c0007t0001	a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0009 others(47): Show a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0012 a0001c0001t0001g0057 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0179 a0001c0001t0001g0181 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0196 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0222 a0001c0001t0001g0223 a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0001g0227 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0235 a0001c0001t0001g0359 a0001c0001t0002g0010 a0001c0001t0002g0193 a0001c0001t0002g0221 a0001c0007t0001g0056	57	374	0.1524	29	c.359 others(46): Show c.359+9584_359+9612dupTATATAACATATACTTTATGTATATGTT A	LMNB1	ENSG00000113368.12	transcript	ENST00000261366.10	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr5	TogoVar
LMNB1_chr5_126772136_126842020	126800981	A A	ATATATAT others(22): Show ATATATATATATATATATATAATTTTTTTT	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG01433.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0228 a0001c0001t0003g0228	1	374	0.0027	29	c.360 others(46): Show c.360-3795_360-3794insTATATATATATATATATATAATTTTTTT T	LMNB1	ENSG00000113368.12	transcript	ENST00000261366.10	protein_coding	1/10			chr5	TogoVar
LMO7_chr13_75631330_75864866	75776162	G G	GATATATA others(22): Show GATATATATATATATATATATATATCGGAT	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01099.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0005 a0002c0003t0005	a0002c0003t0005g0070 a0002c0003t0005g0070	1	272	0.0037	29	c.317 others(48): Show c.317+15148_317+15149insCGGATATATATATATATATATATATA TAT	LMO7	ENSG00000136153.20	transcript	ENST00000377534.8	protein_coding	4/30		INFO_REALIGN_3_PRIME	chr13	TogoVar
LMO7_chr13_75631330_75864866	75776162	G G	GATATATA others(22): Show GATATATATATATATATATATATCGGATAT	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG00673.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0256 a0002c0003t0001g0256	1	272	0.0037	29	c.317 others(48): Show c.317+15146_317+15147insCGGATATATATATATATATATATATA TAT	LMO7	ENSG00000136153.20	transcript	ENST00000377534.8	protein_coding	4/30		INFO_REALIGN_3_PRIME	chr13	TogoVar
LMOD1_chr1_201891456_201951548	201947181	G G	GAGAGAGA others(22): Show GAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01515.hp2 NA19086.hp1 HG01515.hp2 NA19086.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0009 a0002c0002t0002g0036 a0002c0002t0002g0009 a0002c0002t0002g0036	2	400	0.0050	29	c.-84 others(38): Show c.-842_-841insTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	LMOD1	ENSG00000163431.14	transcript	ENST00000367288.5	protein_coding		634		chr1	TogoVar
LMOD1_chr1_201891456_201951548	201948342	A A	AGAAAGAA others(22): Show AGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01952.hp1 HG01952.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0281 a0001c0001t0001g0281	1	400	0.0025	29	c.-20 others(40): Show c.-2003_-2002insCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	LMOD1	ENSG00000163431.14	transcript	ENST00000367288.5	protein_coding		1795		chr1	TogoVar
LMOD3_chr3_69101065_69127595	69110853	A A	AAAAAAAA others(22): Show AAAAAAAAAAAAAAAAAAAAAAATATATAT	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00544.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0138 a0001c0001t0138	a0001c0001t0138g0132 a0001c0001t0138g0132	1	428	0.0023	29	c.165 others(48): Show c.1657-1733_1657-1732insATATATATTTTTTTTTTTTTTTTTTT TTT	LMOD3	ENSG00000163380.16	transcript	ENST00000420581.7	protein_coding	2/2			chr3	TogoVar
LMOD3_chr3_69101065_69127595	69110853	A A	AAAAAAAA others(22): Show AAAAAAAAAAAAAAAAAAAAATATATATAT	intron_variant intron_variant	MODIFIER	NA19000.hp2 NA19000.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0151 a0001c0002t0151	a0001c0002t0151g0354 a0001c0002t0151g0354	1	428	0.0023	29	c.165 others(48): Show c.1657-1733_1657-1732insATATATATATTTTTTTTTTTTTTTTT TTT	LMOD3	ENSG00000163380.16	transcript	ENST00000420581.7	protein_coding	2/2			chr3	TogoVar
LMOD3_chr3_69101065_69127595	69110853	A A	AAAAAAAA others(22): Show AAAAAAAAAAAAAAAAAAATATATATATAT	intron_variant intron_variant	MODIFIER	NA19070.hp1 NA19074.hp1 NA19070.hp1 NA19074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0068 a0001c0001t0003g0082 a0001c0001t0003g0068 a0001c0001t0003g0082	2	428	0.0047	29	c.165 others(48): Show c.1657-1733_1657-1732insATATATATATATTTTTTTTTTTTTTT TTT	LMOD3	ENSG00000163380.16	transcript	ENST00000420581.7	protein_coding	2/2			chr3	TogoVar
LMOD3_chr3_69101065_69127595	69110853	A A	AAAAAAAA others(22): Show AAAAAAAAAAAAAAATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01169.hp1 HG01167.hp1 HG01169.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0072 a0001c0001t0014g0073 a0001c0001t0014g0072 a0001c0001t0014g0073	2	428	0.0047	29	c.165 others(48): Show c.1657-1733_1657-1732insATATATATATATATATTTTTTTTTTT TTT	LMOD3	ENSG00000163380.16	transcript	ENST00000420581.7	protein_coding	2/2			chr3	TogoVar
LNX1_chr4_53454301_53596486	53495548	C C	CTTTTTTT others(22): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03688.hp2 HG03688.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0243 a0001c0001t0004g0243	1	356	0.0028	29	c.135 others(46): Show c.1350+474_1350+475insAAAAAAAAAAAAAAAAAAAAAAAAAAAA A	LNX1	ENSG00000072201.14	transcript	ENST00000263925.8	protein_coding	6/10			chr4	TogoVar
LNX2_chr13_27540913_27625529	27583255	T T	TGTGTGTG others(22): Show TGTGTGTGTGTGTGTCGCGCGCGCGCGCGC	intron_variant intron_variant	MODIFIER	NA18994.hp1 NA18994.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0134 a0002c0002t0001g0134	1	358	0.0028	29	c.-10 others(48): Show c.-100-1453_-100-1452insGCGCGCGCGCGCGCGACACACACACA CAC	LNX2	ENSG00000139517.9	transcript	ENST00000316334.5	protein_coding	1/9			chr13	TogoVar
LOC127933115_chrX_23778278_23788367	23780476	A A	ATATATAT others(22): Show ATATATATATATATATAATATATATATATT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00558.hp1 HG00639.hp2 others(84): Show HG00099.hp1 HG00558.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00735.hp2 HG00741.hp1 HG00741.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01081.hp1 HG01192.hp1 HG01255.hp1 HG01258.hp1 HG01346.hp2 HG01361.hp2 HG01884.hp2 HG01943.hp1 HG01952.hp1 HG01975.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp2 HG02004.hp2 HG02027.hp1 HG02148.hp1 HG02155.hp2 HG02486.hp1 HG02523.hp1 HG02523.hp2 HG02615.hp1 HG02622.hp2 HG02630.hp1 HG02735.hp1 HG02738.hp1 HG02818.hp2 HG03130.hp1 HG03239.hp2 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03669.hp1 HG03688.hp1 HG03831.hp2 HG03927.hp2 HG04115.hp1 NA18940.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp1 NA18947.hp1 NA18947.hp2 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18953.hp1 NA18964.hp1 NA18967.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp1 NA18979.hp1 NA18980.hp1 NA18980.hp2 NA18988.hp1 NA18989.hp1 NA18990.hp1 NA19002.hp2 NA19004.hp1 NA19009.hp1 NA19011.hp1 NA19011.hp2 NA19064.hp1 NA19068.hp1 NA19075.hp1 NA19081.hp2 NA19082.hp1 NA19085.hp1 NA19090.hp1 NA19091.hp1 NA20129.hp1 NA20300.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0000 a0001c0001t0000g0000	87	334	0.2605	29	c.-28 others(40): Show c.-2802_-2801insTATATATATATATATAATATATATATATT	LOC127933115	ENSG00000288706.1	transcript	ENST00000683890.1	protein_coding		2801		chrX	TogoVar
LOC127933115_chrX_23778278_23788367	23780490	T T	TAATATAT others(22): Show TAATATATATATATATTATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03654.hp1 HG03654.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0000 a0001c0001t0000g0000	1	334	0.0030	29	c.-27 others(40): Show c.-2788_-2787insAATATATATATATATTATATATATATATA	LOC127933115	ENSG00000288706.1	transcript	ENST00000683890.1	protein_coding		2787		chrX	TogoVar
LOC127933115_chrX_23778278_23788367	23780490	T T	TAATATAT others(22): Show TAATATATATATATTATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02071.hp1 HG02071.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0000 a0001c0001t0000g0000	1	334	0.0030	29	c.-27 others(40): Show c.-2788_-2787insAATATATATATATTATATATATATATATA	LOC127933115	ENSG00000288706.1	transcript	ENST00000683890.1	protein_coding		2787		chrX	TogoVar
LOC128462377_chr16_89312046_89423292	89349134	T T	TAAAAAAA others(22): Show TAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01167.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0041 a0001c0001t0000g0041	1	366	0.0027	29	c.10- others(46): Show c.10-32060_10-32059insTTTTTTTTTTTTTTTTTTTTTTTTTTTT T	LOC128462377	ENSG00000288715.2	transcript	ENST00000711617.1	protein_coding	1/1			chr16	TogoVar
LOC128462377_chr16_89312046_89423292	89384879	C C	CTTTTTTT others(22): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0236 a0001c0001t0000g0236	1	366	0.0027	29	c.9+3 others(44): Show c.9+33404_9+33405insAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	LOC128462377	ENSG00000288715.2	transcript	ENST00000711617.1	protein_coding	1/1			chr16	TogoVar
LOC128462377_chr16_89312046_89423292	89415829	C C	CAAAAAAA others(22): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01515.hp2 HG02523.hp2 NA19079.hp1 HG01515.hp2 HG02523.hp2 NA19079.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0015 a0001c0001t0000g0182 a0001c0001t0000g0183 a0001c0001t0000g0015 a0001c0001t0000g0182 a0001c0001t0000g0183	3	366	0.0082	29	c.9+2 others(42): Show c.9+2454_9+2455insTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	LOC128462377	ENSG00000288715.2	transcript	ENST00000711617.1	protein_coding	1/1			chr16	TogoVar
LOC128706665_chr20_10408708_10439222	10427021	A A	ACTGACAC others(22): Show ACTGACACACACACAGACACACACACACAC	intron_variant intron_variant	MODIFIER	NA19090.hp1 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0301 a0001c0001t0002g0301	1	408	0.0025	29	c.-21 others(46): Show c.-21-6264_-21-6263insGTGTGTGTGTGTGTCTGTGTGTGTGTCA G	LOC128706665	ENSG00000285723.2	transcript	ENST00000649912.2	protein_coding	1/2			chr20	TogoVar
LOC128706666_chr20_10408708_10439222	10427021	A A	ACTGACAC others(22): Show ACTGACACACACACAGACACACACACACAC	intron_variant intron_variant	MODIFIER	NA19090.hp1 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0301 a0001c0001t0002g0301	1	408	0.0025	29	c.-27 others(48): Show c.-275-6264_-275-6263insGTGTGTGTGTGTGTCTGTGTGTGTGT CAG	LOC128706666	ENSG00000285508.2	transcript	ENST00000713549.1	protein_coding	1/2			chr20	TogoVar
LOC400499_chr16_11367015_11532247	11473528	G G	GCGGATCA others(22): Show GCGGATCACCCGAGGTCAGGAGTTCAAGAC	intron_variant intron_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0067 a0067	a0067c0119 a0067c0119	a0067c0119t0003 a0067c0119t0003	a0067c0119t0003g0011 a0067c0119t0003g0011	1	310	0.0032	29	c.282 others(48): Show c.2825-1740_2825-1712dupGTCTTGAACTCCTGACCTCGGGTGAT CCG	LOC400499	ENSG00000188897.10	transcript	ENST00000696174.1	protein_coding	20/66			chr16	TogoVar
LOC647264_chr13_63827361_63838053	63833748	T T	TATATATA others(22): Show TATATATATATATATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp1 HG03239.hp1 NA18965.hp1 others(2): Show HG00280.hp1 HG03239.hp1 NA18965.hp1 NA18974.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0000 a0001c0001t0002g0000	5	442	0.0113	29	c.-75 others(38): Show c.-756_-755insTATATATATATATATATATATATATATAT	LOC647264	ENSG00000285566.2	transcript	ENST00000648713.2	protein_coding		696		chr13	TogoVar

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