Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LRRC27_chr10_132327193_132386508	132358847	C C	CGTGGGGA others(22): Show CGTGGGGAGGAGCCGAGGTGATGGAGCAGT	intron_variant intron_variant	MODIFIER	HG01361.hp2 HG01361.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0006 a0001c0003t0006	a0001c0003t0006g0098 a0001c0003t0006g0098	1	290	0.0035	29	c.117 others(48): Show c.1171-2608_1171-2607insGGGGAGGAGCCGAGGTGATGGAGCAG TGT	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132359125	G G	GAGTGTGG others(22): Show GAGTGTGGGGAGGAGCCGAGGTGGTGGAGC	intron_variant intron_variant	MODIFIER	HG01074.hp1 NA19030.hp2 HG01074.hp1 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0025 a0001c0001t0001 a0001c0001t0025	a0001c0001t0001g0118 a0001c0001t0025g0055 a0001c0001t0001g0118 a0001c0001t0025g0055	2	290	0.0069	29	c.117 others(48): Show c.1171-2330_1171-2329insTGTGGGGAGGAGCCGAGGTGGTGGAG CAG	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC3B_chr3_26617772_26715776	26636815	T T	TCCCTCCC others(22): Show TCCCTCCCTCCCTCCCTCCCTCCCTCCCTG	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG01433.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0303 a0001c0001t0001g0303	1	370	0.0027	29	c.-16 others(50): Show c.-161+13602_-161+13603insCCCTGCCCTCCCTCCCTCCCTCCC TCCCT	LRRC3B	ENSG00000179796.13	transcript	ENST00000396641.7	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRRC3_chr21_44450510_44467196	44466044	A A	ACACTCTC others(22): Show ACACTCTCCCTGTACACACACACACATGCT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00280.hp1 others(346): Show HG00099.hp1 HG00099.hp2 HG00280.hp1 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01346.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02040.hp1 HG02040.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02723.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02818.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp2 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03225.hp2 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03490.hp2 HG03491.hp1 HG03492.hp2 HG03516.hp1 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18940.hp2 NA18941.hp1 NA18944.hp1 NA18944.hp2 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18959.hp2 NA18960.hp1 NA18961.hp1 NA18962.hp1 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18981.hp1 NA18982.hp1 NA18982.hp2 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18986.hp2 NA18990.hp1 NA18990.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19004.hp1 NA19004.hp2 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp2 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19055.hp2 NA19056.hp1 NA19058.hp1 NA19058.hp2 NA19059.hp2 NA19060.hp2 NA19062.hp1 NA19062.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19070.hp1 NA19074.hp1 NA19074.hp2 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA19240.hp2 NA20129.hp1 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0001c0003 others(4): Show a0001c0001 a0001c0002 a0001c0003 a0001c0006 a0001c0008 a0001c0012 a0003c0009	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(45): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 a0001c0001t0020 a0001c0001t0021 a0001c0001t0022 a0001c0001t0024 a0001c0001t0035 a0001c0001t0038 a0001c0001t0039 a0001c0001t0040 a0001c0001t0041 a0001c0001t0042 a0001c0001t0043 a0001c0001t0044 a0001c0001t0045 a0001c0001t0046 a0001c0001t0047 a0001c0001t0048 a0001c0001t0049 a0001c0001t0050 a0001c0001t0052 a0001c0001t0058 a0001c0001t0060 a0001c0001t0061 a0001c0001t0062 a0001c0001t0063 a0001c0002t0004 a0001c0002t0033 a0001c0002t0055 a0001c0002t0056 a0001c0003t0002 a0001c0003t0034 a0001c0003t0037 a0001c0003t0051 a0001c0006t0013 a0001c0006t0023 a0001c0008t0008 a0001c0012t0001 a0003c0009t0001	a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0012 others(49): Show a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0012 a0001c0001t0002g0001 a0001c0001t0005g0001 a0001c0001t0006g0001 a0001c0001t0006g0006 a0001c0001t0007g0002 a0001c0001t0008g0001 a0001c0001t0009g0001 a0001c0001t0011g0001 a0001c0001t0016g0004 a0001c0001t0017g0001 a0001c0001t0018g0001 a0001c0001t0020g0001 a0001c0001t0021g0001 a0001c0001t0022g0001 a0001c0001t0024g0001 a0001c0001t0035g0001 a0001c0001t0038g0001 a0001c0001t0039g0013 a0001c0001t0040g0001 a0001c0001t0041g0001 a0001c0001t0042g0001 a0001c0001t0043g0001 a0001c0001t0044g0001 a0001c0001t0045g0001 a0001c0001t0046g0001 a0001c0001t0047g0001 a0001c0001t0048g0001 a0001c0001t0049g0001 a0001c0001t0050g0001 a0001c0001t0052g0001 a0001c0001t0058g0001 a0001c0001t0060g0005 a0001c0001t0061g0005 a0001c0001t0062g0001 a0001c0001t0063g0001 a0001c0002t0004g0001 a0001c0002t0033g0001 a0001c0002t0055g0001 a0001c0002t0056g0001 a0001c0003t0002g0001 a0001c0003t0034g0001 a0001c0003t0037g0001 a0001c0003t0051g0001 a0001c0006t0013g0001 a0001c0006t0013g0011 a0001c0006t0023g0001 a0001c0008t0008g0001 a0001c0012t0001g0001 a0003c0009t0001g0001	349	426	0.8193	29	c.86 others(40): Show c.8626_*8627insCACTCTCCCTGTACACACACACACATGCT	LRRC3	ENSG00000160233.8	transcript	ENST00000291592.6	protein_coding		3849		chr21	TogoVar
LRRC40_chr1_70139805_70210579	70190677	T T	TAAAAAAA others(22): Show TAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00639.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0133 a0001c0001t0001g0133	1	320	0.0031	29	c.152 others(46): Show c.152-1405_152-1404insTTTTTTTTTTTTTTTTTTTTTTTTTTTT T	LRRC40	ENSG00000066557.6	transcript	ENST00000370952.4	protein_coding	1/14			chr1	TogoVar
LRRC4B_chr19_50511892_50573435	50513457	G G	GGGGGACA others(22): Show GGGGGACAGAGACCCAGAGAGAGAGGAGGT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02280.hp2 HG02280.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0284 a0002c0002t0001g0284	1	360	0.0028	29	c.40 others(40): Show c.4085_*4113dupACCTCCTCTCTCTCTGGGTCTCTGTCCCC	LRRC4B	ENSG00000131409.13	transcript	ENST00000652263.1	protein_coding		3434		chr19	TogoVar
LRRC4C_chr11_40109209_41464652	41411142	A A	ATTTTTTT others(22): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02970.hp2 HG03225.hp1 others(1): Show HG02055.hp2 HG02970.hp2 HG03225.hp1 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0002t0002	a0001c0001t0001g0006 a0001c0001t0002g0009 a0001c0002t0001g0021 others(1): Show a0001c0001t0001g0006 a0001c0001t0002g0009 a0001c0002t0001g0021 a0001c0002t0002g0008	4	48	0.0833	29	c.-49 others(50): Show c.-496+48288_-496+48289insAAAAAAAAAAAAAAAAAAAAAAAA AAAAA	LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	1/6			chr11	TogoVar
LRRC56_chr11_532527_559912	542580	C C	CAAAAAAA others(22): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02647.hp2 HG02922.hp1 others(1): Show HG01891.hp2 HG02647.hp2 HG02922.hp1 HG03098.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0026 a0002c0002t0003g0095 a0002c0002t0003g0096 a0002c0002t0003g0026 a0002c0002t0003g0095 a0002c0002t0003g0096	4	387	0.0103	29	c.265 others(44): Show c.265+980_265+981insAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	LRRC56	ENSG00000161328.11	transcript	ENST00000270115.8	protein_coding	5/13		INFO_REALIGN_3_PRIME	chr11	TogoVar
LRRC57_chr15_42532829_42553793	42544838	C C	CTATATAT others(22): Show CTATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02818.hp1 HG03453.hp1 others(1): Show HG02809.hp1 HG02818.hp1 HG03453.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0044 a0001c0001t0006 a0001c0001t0044	a0001c0001t0006g0017 a0001c0001t0044g0128 a0001c0001t0006g0017 a0001c0001t0044g0128	4	356	0.0112	29	c.678 others(44): Show c.678+238_678+239insATATATATATATATATATATATATATATA	LRRC57	ENSG00000180979.10	transcript	ENST00000397130.8	protein_coding	5/5			chr15	TogoVar
LRRC58_chr3_120319509_120354354	120347379	C C	CTTTTTTT others(22): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00738.hp1 NA20300.hp1 HG00738.hp1 NA20300.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0055 a0001c0003t0003 a0001c0003t0055	a0001c0003t0003g0169 a0001c0003t0055g0168 a0001c0003t0003g0169 a0001c0003t0055g0168	2	376	0.0053	29	c.500 others(46): Show c.500+1364_500+1365insAAAAAAAAAAAAAAAAAAAAAAAAAAAA A	LRRC58	ENSG00000163428.4	transcript	ENST00000295628.4	protein_coding	1/3			chr3	TogoVar
LRRC63_chr13_46206928_46282115	46276234	A A	AAAATTAG others(22): Show AAAATTAGAAAATAATTTATTATTTTTTAT	intron_variant intron_variant	MODIFIER	HG02280.hp1 NA20300.hp1 HG02280.hp1 NA20300.hp1	a0003 a0003	a0003c0006 a0003c0006	a0003c0006t0048 a0003c0006t0057 a0003c0006t0048 a0003c0006t0057	a0003c0006t0048g0318 a0003c0006t0057g0141 a0003c0006t0048g0318 a0003c0006t0057g0141	2	386	0.0052	29	c.155 others(46): Show c.1551-356_1551-355insAAATTAGAAAATAATTTATTATTTTTTA T	LRRC63	ENSG00000173988.14	transcript	ENST00000595396.3	protein_coding	9/9			chr13	TogoVar
LRRC71_chr1_156915632_156938094	156936495	A A	ATATATAT others(22): Show ATATATATATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18947.hp1 NA18947.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0015 a0001c0001t0001g0015	1	402	0.0025	29	c.35 others(40): Show c.3526_*3527insTATATATATATATATATATATATATATAT	LRRC71	ENSG00000160838.14	transcript	ENST00000337428.8	protein_coding		3402		chr1	TogoVar
LRRC71_chr1_156915632_156938094	156936497	A A	AAAAATAT others(22): Show AAAAATATATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0217 a0001c0001t0001g0217	1	402	0.0025	29	c.35 others(40): Show c.3528_*3529insAAAATATATATATATATATATATATATAT	LRRC71	ENSG00000160838.14	transcript	ENST00000337428.8	protein_coding		3404		chr1	TogoVar
LRRC74A_chr14_76821408_76875304	76867164	G G	GGTGTGTG others(22): Show GGTGTGTGTGTTGGGGGGTGGGGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02129.hp2 HG03688.hp2 NA20905.hp2 HG02129.hp2 HG03688.hp2 NA20905.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0002 a0004c0006 a0001c0001 a0002c0002 a0004c0006	a0001c0001t0001 a0002c0002t0001 a0004c0006t0001 a0001c0001t0001 a0002c0002t0001 a0004c0006t0001	a0001c0001t0001g0218 a0002c0002t0001g0012 a0004c0006t0001g0381 a0001c0001t0001g0218 a0002c0002t0001g0012 a0004c0006t0001g0381	3	408	0.0074	29	c.130 others(46): Show c.1309-185_1309-184insTGTTGGGGGGTGGGGTGTGTGTGTGTGT G	LRRC74A	ENSG00000100565.16	transcript	ENST00000689127.1	protein_coding	12/13		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRRC7_chr1_69562922_70149364	69718126	A A	AAAGAAAG others(22): Show AAAGAAAGAGAGAGAAAGAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	NA18968.hp2 NA18968.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0037 a0001c0001t0037	a0001c0001t0037g0016 a0001c0001t0037g0016	1	108	0.0093	29	c.100 others(48): Show c.100+39650_100+39651insGAAAGAGAGAGAAAGAAAGAAAGAAA GAA	LRRC7	ENSG00000033122.21	transcript	ENST00000651989.2	protein_coding	2/26		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC7_chr1_69562922_70149364	69781786	A A	AAAGAAGA others(22): Show AAAGAAGAAGAAGAAAGGAAGGAAGGAAGG	intron_variant intron_variant	MODIFIER	NA19000.hp1 NA19000.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0020 a0001c0003t0020	a0001c0003t0020g0005 a0001c0003t0020g0005	1	108	0.0093	29	c.304 others(48): Show c.304-10254_304-10253insAAGAAGAAGAAAGGAAGGAAGGAAGG AAG	LRRC7	ENSG00000033122.21	transcript	ENST00000651989.2	protein_coding	3/26		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC9_chr14_59915144_60071817	60067740	A A	ATATATAT others(22): Show ATATATATATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18999.hp1 NA18999.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0313 a0001c0001t0001g0313	1	322	0.0031	29	c.43 others(40): Show c.4378_*4379insTATATATATATATATATATATATATATAT	LRRC9	ENSG00000131951.12	transcript	ENST00000570145.2	protein_coding		924		chr14	TogoVar
LRRFIP1_chr2_237622587_237786643	237633531	T T	TGAGAGGC others(22): Show TGAGAGGCGGTGTGGATGAGGGAAATCCAG	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG02257.hp1 HG02572.hp2 others(3): Show HG00642.hp2 HG02257.hp1 HG02572.hp2 HG02976.hp2 HG03453.hp1 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0013 others(1): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0013 a0001c0001t0042	a0001c0001t0001g0044 a0001c0001t0001g0099 a0001c0001t0001g0104 others(3): Show a0001c0001t0001g0044 a0001c0001t0001g0099 a0001c0001t0001g0104 a0001c0001t0004g0043 a0001c0001t0013g0047 a0001c0001t0042g0100	6	276	0.0217	29	c.96+ others(44): Show c.96+5793_96+5794insGAGGCGGTGTGGATGAGGGAAATCCAGGA	LRRFIP1	ENSG00000124831.20	transcript	ENST00000308482.14	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
LRRFIP1_chr2_237622587_237786643	237681678	C C	CTTTTTTT others(22): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG06807.hp1 HG06807.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0139 a0001c0002t0003g0139	1	276	0.0036	29	c.97- others(46): Show c.97-26847_97-26846insTTTTTTTTTTTTTTTTTTTTTTTTTTTT T	LRRFIP1	ENSG00000124831.20	transcript	ENST00000308482.14	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
LRRIQ1_chr12_85031351_85250105	85174701	C C	CAAAAAAA others(22): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01981.hp1 HG01981.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0195 a0002c0003t0001g0195	1	228	0.0044	29	c.482 others(50): Show c.4822+14009_4822+14010insAAAAAAAAAAAAAAAAAAAAAAAA AAAAA	LRRIQ1	ENSG00000133640.20	transcript	ENST00000393217.7	protein_coding	24/26		INFO_REALIGN_3_PRIME	chr12	TogoVar
LRRK2_chr12_40219997_40374285	40280621	T T	TTAAATAA others(22): Show TTAAATAAAATAAAATAAAATAAAATAAAA	intron_variant intron_variant	MODIFIER	HG03491.hp2 HG03491.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0016 a0002c0001t0001g0016	1	382	0.0026	29	c.224 others(48): Show c.2241+2364_2241+2365insTAAAATAAAATAAAATAAAATAAAAT AAA	LRRK2	ENSG00000188906.17	transcript	ENST00000298910.12	protein_coding	18/50		INFO_REALIGN_3_PRIME	chr12	TogoVar
LRRTM3_chr10_66921036_67106551	66978552	A A	AAAAAAAA others(22): Show AAAAAAAAATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19009.hp1 NA19009.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0193 a0001c0001t0002g0193	1	294	0.0034	29	c.153 others(50): Show c.1536+50101_1536+50102insAAAAAAATATATATATATATATAT ATATA	LRRTM3	ENSG00000198739.11	transcript	ENST00000361320.5	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRTM4_chr2_76742685_77527376	77306897	A A	ATTTTTTT others(22): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02622.hp2 NA18965.hp2 NA18966.hp1 HG02622.hp2 NA18965.hp2 NA18966.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0001 a0001c0001t0006	a0001c0001t0001g0028 a0001c0001t0001g0041 a0001c0001t0006g0034 a0001c0001t0001g0028 a0001c0001t0001g0041 a0001c0001t0006g0034	3	128	0.0234	29	c.155 others(52): Show c.1551+211420_1551+211421insAAAAAAAAAAAAAAAAAAAAAA AAAAAAA	LRRTM4	ENSG00000176204.14	transcript	ENST00000409884.6	protein_coding	3/3			chr2	TogoVar
LRWD1_chr7_102459984_102478168	102463322	C C	CTTTTTTT others(22): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0005 a0005	a0005c0013 a0005c0013	a0005c0013t0002 a0005c0013t0002	a0005c0013t0002g0167 a0005c0013t0002g0167	1	428	0.0023	29	c.-17 others(40): Show c.-1759_-1758insTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	LRWD1	ENSG00000161036.13	transcript	ENST00000292616.10	protein_coding		1661		chr7	TogoVar
LSM14A_chr19_34167504_34234288	34192316	G G	GTTTTTTT others(22): Show GTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01070.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0115 a0001c0001t0002g0115	1	315	0.0032	29	c.122 others(46): Show c.122-2160_122-2159insTTTTTTTTTTTTTTTTTTTTTTTTTTTT T	LSM14A	ENSG00000257103.9	transcript	ENST00000544216.8	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr19	TogoVar
LSR_chr19_35244002_35272964	35251843	C C	CTTTTTTT others(22): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00621.hp1 HG00735.hp2 others(29): Show HG00544.hp2 HG00621.hp1 HG00735.hp2 HG01070.hp2 HG01081.hp2 HG01109.hp1 HG01167.hp1 HG01169.hp2 HG01261.hp1 HG01346.hp1 HG01975.hp1 HG01993.hp1 HG02056.hp2 HG02257.hp2 HG02280.hp2 HG02818.hp2 HG03041.hp2 HG03490.hp1 HG03491.hp1 HG03654.hp2 HG03710.hp2 HG04115.hp2 HG04199.hp2 NA18952.hp1 NA18960.hp2 NA18967.hp1 NA18970.hp2 NA18971.hp2 NA18984.hp2 NA18985.hp1 NA19003.hp2 NA19077.hp2	a0001 a0003 a0001 a0003	a0001c0002 a0003c0003 a0001c0002 a0003c0003	a0001c0002t0001 a0003c0003t0001 a0001c0002t0001 a0003c0003t0001	a0001c0002t0001g0042 a0001c0002t0001g0128 a0001c0002t0001g0129 others(14): Show a0001c0002t0001g0042 a0001c0002t0001g0128 a0001c0002t0001g0129 a0003c0003t0001g0005 a0003c0003t0001g0023 a0003c0003t0001g0047 a0003c0003t0001g0144 a0003c0003t0001g0145 a0003c0003t0001g0146 a0003c0003t0001g0147 a0003c0003t0001g0148 a0003c0003t0001g0149 a0003c0003t0001g0150 a0003c0003t0001g0151 a0003c0003t0001g0152 a0003c0003t0001g0153 a0003c0003t0001g0214	32	438	0.0731	29	c.454 others(46): Show c.454+1193_454+1194insTTTTTTTTTTTTTTTTTTTTTTTTTTTT T	LSR	ENSG00000105699.17	transcript	ENST00000605618.6	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr19	TogoVar
LTBP1_chr2_32941953_33404509	33087084	C C	CTTTTTTT others(22): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18953.hp1 NA18953.hp1	a0001 a0001	a0001c0027 a0001c0027	a0001c0027t0039 a0001c0027t0039	a0001c0027t0039g0038 a0001c0027t0039g0038	1	164	0.0061	29	c.864 others(48): Show c.864-23474_864-23473insTTTTTTTTTTTTTTTTTTTTTTTTTT TTT	LTBP1	ENSG00000049323.16	transcript	ENST00000404816.7	protein_coding	3/33		INFO_REALIGN_3_PRIME	chr2	TogoVar
LTBP1_chr2_32941953_33404509	33328162	T T	TAAATAAA others(22): Show TAAATAAATAAATAAATAAATAAATAAATA	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02895.hp2	a0002 a0002	a0002c0019 a0002c0019	a0002c0019t0009 a0002c0019t0009	a0002c0019t0009g0073 a0002c0019t0009g0073	1	164	0.0061	29	c.373 others(50): Show c.3730+12900_3730+12901insTAAATAAATAAATAAATAAATAAA ATAAA	LTBP1	ENSG00000049323.16	transcript	ENST00000404816.7	protein_coding	24/33		INFO_REALIGN_3_PRIME	chr2	TogoVar
LTBP2_chr14_74493183_74617237	74604164	C C	CAAAAAAA others(22): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0004 a0004	a0004c0021 a0004c0021	a0004c0021t0001 a0004c0021t0001	a0004c0021t0001g0274 a0004c0021t0001g0274	1	282	0.0036	29	c.495 others(44): Show c.495-460_495-459insTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	LTBP2	ENSG00000119681.12	transcript	ENST00000261978.9	protein_coding	1/35			chr14	TogoVar
LTBP4_chr19_40596369_40634818	40625314	A A	ATTTATAT others(22): Show ATTTATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0039 a0001c0001t0001g0039	1	338	0.0030	29	c.383 others(46): Show c.3833-542_3833-541insTTATATATATATATATATATATATATAT T	LTBP4	ENSG00000090006.18	transcript	ENST00000396819.8	protein_coding	26/29		INFO_REALIGN_3_PRIME	chr19	TogoVar
LTN1_chr21_28923144_28997877	28927499	A A	ATATATAT others(22): Show ATATATATATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19086.hp2 NA19086.hp2	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0001 a0004c0005t0001	a0004c0005t0001g0089 a0004c0005t0001g0089	1	404	0.0025	29	c.29 others(40): Show c.2948_*2949insATATATATATATATATATATATATATATA	LTN1	ENSG00000198862.14	transcript	ENST00000361371.10	protein_coding		644		chr21	TogoVar
LTN1_chr21_28923144_28997877	28927501	A A	ATATATAT others(22): Show ATATATATATATATATATATATATATATTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02145.hp2 NA19010.hp1 NA19079.hp2 others(1): Show HG02145.hp2 NA19010.hp1 NA19079.hp2 NA19087.hp2	a0001 a0004 a0001 a0004	a0001c0004 a0004c0005 a0001c0004 a0004c0005	a0001c0004t0001 a0004c0005t0001 a0001c0004t0001 a0004c0005t0001	a0001c0004t0001g0275 a0004c0005t0001g0004 a0004c0005t0001g0316 others(1): Show a0001c0004t0001g0275 a0004c0005t0001g0004 a0004c0005t0001g0316 a0004c0005t0001g0317	4	404	0.0099	29	c.29 others(40): Show c.2946_*2947insAAATATATATATATATATATATATATATA	LTN1	ENSG00000198862.14	transcript	ENST00000361371.10	protein_coding		642		chr21	TogoVar
LTN1_chr21_28923144_28997877	28927501	A A	ATATATAT others(22): Show ATATATATATATATATATATATATTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA20805.hp1 NA20805.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0002 a0001c0004t0001g0002	1	404	0.0025	29	c.29 others(40): Show c.2946_*2947insAAAAAAATATATATATATATATATATATA	LTN1	ENSG00000198862.14	transcript	ENST00000361371.10	protein_coding		642		chr21	TogoVar
LTN1_chr21_28923144_28997877	28927501	A A	ATATATAT others(22): Show ATATATATATATATATATATTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02080.hp2 HG02083.hp2 HG02080.hp2 HG02083.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0002 a0001c0004t0001g0286 a0001c0004t0001g0002 a0001c0004t0001g0286	2	404	0.0050	29	c.29 others(40): Show c.2946_*2947insAAAAAAAAAAATATATATATATATATATA	LTN1	ENSG00000198862.14	transcript	ENST00000361371.10	protein_coding		642		chr21	TogoVar
LUM_chr12_91097629_91116494	91106692	A A	AAAAAAAA others(22): Show AAAAAAAAAAAAAAAAAAAAAAGATGTTAG	intron_variant intron_variant	MODIFIER	NA19057.hp2 NA19057.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0097 a0001c0001t0001g0097	1	384	0.0026	29	c.862 others(46): Show c.862+1425_862+1426insCTAACATCTTTTTTTTTTTTTTTTTTTT T	LUM	ENSG00000139329.5	transcript	ENST00000266718.5	protein_coding	2/2			chr12	TogoVar
LUZP2_chr11_24492053_25087638	24764490	T T	TAAAAAAA others(22): Show TAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0038 a0001c0001t0038	a0001c0001t0038g0090 a0001c0001t0038g0090	1	116	0.0086	29	c.396 others(46): Show c.396+1208_396+1209insAAAAAAAAAAAAAAAAAAAAAAAAAAAA A	LUZP2	ENSG00000187398.12	transcript	ENST00000336930.11	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr11	TogoVar
LUZP2_chr11_24492053_25087638	24786712	T T	TTATATAT others(22): Show TTATATATAAATAGGTATATTATGTATTTA	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG01109.hp2 HG01884.hp1 others(15): Show HG00423.hp1 HG01109.hp2 HG01884.hp1 HG01891.hp2 HG02080.hp1 HG02129.hp1 HG02129.hp2 HG02280.hp1 HG02523.hp1 HG02683.hp2 HG03041.hp2 HG03540.hp2 HG03834.hp1 HG04228.hp2 NA18981.hp1 NA19043.hp1 NA19070.hp2 NA19240.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0004 a0001c0001 a0002c0002 a0003c0004	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(10): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0010 a0001c0001t0011 a0001c0001t0033 a0001c0001t0034 a0002c0002t0001 a0002c0002t0008 a0002c0002t0026 a0003c0004t0018 a0003c0004t0036	a0001c0001t0002g0019 a0001c0001t0002g0048 a0001c0001t0002g0106 others(15): Show a0001c0001t0002g0019 a0001c0001t0002g0048 a0001c0001t0002g0106 a0001c0001t0003g0081 a0001c0001t0004g0062 a0001c0001t0004g0075 a0001c0001t0007g0103 a0001c0001t0010g0037 a0001c0001t0011g0107 a0001c0001t0033g0112 a0001c0001t0034g0053 a0002c0002t0001g0026 a0002c0002t0001g0066 a0002c0002t0001g0083 a0002c0002t0008g0021 a0002c0002t0026g0010 a0003c0004t0018g0098 a0003c0004t0036g0070	18	116	0.1552	29	c.396 others(48): Show c.396+23412_396+23413insAATAGGTATATTATGTATTTATATAT ATA	LUZP2	ENSG00000187398.12	transcript	ENST00000336930.11	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr11	TogoVar
LUZP2_chr11_24492053_25087638	24826190	A A	AAAAATAT others(22): Show AAAAATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0030 a0001c0001t0005g0030	1	116	0.0086	29	c.396 others(48): Show c.396+62883_396+62884insAAATATATATATATATATATATATAT ATA	LUZP2	ENSG00000187398.12	transcript	ENST00000336930.11	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr11	TogoVar
LUZP2_chr11_24492053_25087638	25040343	A A	ATTTTTTT others(22): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0038 a0001c0001t0010g0038	1	116	0.0086	29	c.766 others(46): Show c.766-9675_766-9674insTTTTTTTTTTTTTTTTTTTTTTTTTTTT T	LUZP2	ENSG00000187398.12	transcript	ENST00000336930.11	protein_coding	9/11		INFO_REALIGN_3_PRIME	chr11	TogoVar
LUZP2_chr11_24492053_25087638	25043906	A A	ACTCTACA others(22): Show ACTCTACATATATCTGATATATATATAGTC	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG02080.hp1 HG02165.hp2 others(3): Show HG01106.hp2 HG02080.hp1 HG02165.hp2 HG02523.hp2 HG02683.hp1 NA18981.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0017 a0001c0001t0021 a0001c0001t0007 a0001c0001t0017 a0001c0001t0021	a0001c0001t0007g0007 a0001c0001t0007g0012 a0001c0001t0007g0015 others(3): Show a0001c0001t0007g0007 a0001c0001t0007g0012 a0001c0001t0007g0015 a0001c0001t0007g0103 a0001c0001t0017g0071 a0001c0001t0021g0093	6	116	0.0517	29	c.766 others(46): Show c.766-6101_766-6073dupTCTACATATATCTGATATATATATAGTC C	LUZP2	ENSG00000187398.12	transcript	ENST00000336930.11	protein_coding	9/11		INFO_REALIGN_3_PRIME	chr11	TogoVar
LY75_chr2_159798355_159909756	159873706	T T	TATATATA others(22): Show TATATATACATATAATAAAAATACACATAA	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01261.hp2	a0007 a0007	a0007c0051 a0007c0051	a0007c0051t0002 a0007c0051t0002	a0007c0051t0002g0156 a0007c0051t0002g0156	1	330	0.0030	29	c.197 others(48): Show c.1975-1142_1975-1114dupTTATGTGTATTTTTATTATATGTATA TAT	LY75	ENSG00000054219.11	transcript	ENST00000263636.5	protein_coding	12/34			chr2	TogoVar
LY75_chr2_159798355_159909756	159873806	A A	AGTAAAAA others(22): Show AGTAAAAATACATATAAACGTATATATTTT	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG02257.hp2 HG02630.hp2 others(10): Show HG00639.hp2 HG02257.hp2 HG02630.hp2 HG02647.hp1 HG02896.hp1 HG02897.hp2 HG03041.hp1 HG03225.hp2 HG03453.hp2 HG03579.hp1 HG06807.hp1 HG06807.hp2 NA19030.hp1	a0001 a0025 a0026 a0001 a0025 a0026	a0001c0008 a0025c0025 a0026c0040 a0001c0008 a0025c0025 a0026c0040	a0001c0008t0001 a0025c0025t0001 a0026c0040t0001 a0001c0008t0001 a0025c0025t0001 a0026c0040t0001	a0001c0008t0001g0129 a0001c0008t0001g0152 a0001c0008t0001g0234 others(10): Show a0001c0008t0001g0129 a0001c0008t0001g0152 a0001c0008t0001g0234 a0001c0008t0001g0235 a0001c0008t0001g0236 a0001c0008t0001g0237 a0001c0008t0001g0239 a0001c0008t0001g0240 a0001c0008t0001g0241 a0001c0008t0001g0320 a0025c0025t0001g0242 a0025c0025t0001g0243 a0026c0040t0001g0009	13	330	0.0394	29	c.197 others(48): Show c.1975-1242_1975-1214dupAAAATATATACGTTTATATGTATTTT TAC	LY75	ENSG00000054219.11	transcript	ENST00000263636.5	protein_coding	12/34			chr2	TogoVar
LY75_chr2_159798355_159909756	159874006	T T	TTTTGTAA others(22): Show TTTTGTAAAAATACATATAAACGTATAATA	intron_variant intron_variant	MODIFIER	HG02300.hp1 HG02300.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0089 a0002c0002t0002g0089	1	330	0.0030	29	c.197 others(48): Show c.1975-1414_1975-1413insTATTATACGTTTATATGTATTTTTAC AAA	LY75	ENSG00000054219.11	transcript	ENST00000263636.5	protein_coding	12/34			chr2	TogoVar
LY75_chr2_159798355_159909756	159874330	C C	ATATATAA others(22): Show ATATATAAATATATACATATTTTGTAAATC	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG00558.hp1 HG00597.hp1 others(9): Show HG00544.hp1 HG00558.hp1 HG00597.hp1 HG01516.hp1 HG02071.hp2 HG02132.hp2 NA18747.hp1 NA18970.hp2 NA18981.hp1 NA18983.hp1 NA18990.hp2 NA19084.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0003 a0001c0003t0004 a0001c0003t0001 a0001c0003t0003 a0001c0003t0004	a0001c0003t0001g0256 a0001c0003t0003g0249 a0001c0003t0003g0253 others(9): Show a0001c0003t0001g0256 a0001c0003t0003g0249 a0001c0003t0003g0253 a0001c0003t0003g0258 a0001c0003t0003g0259 a0001c0003t0003g0260 a0001c0003t0003g0261 a0001c0003t0003g0268 a0001c0003t0003g0271 a0001c0003t0003g0274 a0001c0003t0003g0277 a0001c0003t0004g0257	12	330	0.0364	29	c.197 others(48): Show c.1974+1114_1974+1115insATTTACAAAATATGTATATATTTATA TAT	LY75	ENSG00000054219.11	transcript	ENST00000263636.5	protein_coding	12/34			chr2	TogoVar
LY86_chr6_6583720_6659982	6603617	A A	AAAAAAAA others(22): Show AAAAAAAAAACAAAAAACAAAAAAAAAAAC	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0400 a0002c0002t0001g0400	1	424	0.0024	29	c.136 others(48): Show c.136+14748_136+14749insAAAAAAAACAAAAAACAAAAAAAAAA ACA	LY86	ENSG00000112799.9	transcript	ENST00000230568.5	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr6	TogoVar
LYPD1_chr2_132638286_132675205	132671543	C C	CTCCCTCC others(22): Show CTCCCTCCCTCCCTCCCTCTCCCCCTTCTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01261.hp2 HG01261.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0022	a0001c0001t0022g0037 a0001c0001t0022g0037	1	354	0.0028	29	c.-16 others(40): Show c.-1640_-1612dupAAGAAGGGGGAGAGGGAGGGAGGGAGGGA	LYPD1	ENSG00000150551.11	transcript	ENST00000397463.3	protein_coding		1339		chr2	TogoVar
LYPD4_chr19_41832074_41849683	41836325	A A	AAAAAAAA others(22): Show AAAAAAAAAAAAAAAAAAAAAAAAAAAAAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03669.hp1 HG03669.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0012 a0001c0002t0002g0012	1	428	0.0023	29	c.81 others(38): Show c.817_*818insGTTTTTTTTTTTTTTTTTTTTTTTTTTTT	LYPD4	ENSG00000273111.6	transcript	ENST00000609812.6	protein_coding		748		chr19	TogoVar
LYPD6B_chr2_149033699_149220262	149120383	A A	ATATATAT others(22): Show ATATATATATATATATATATTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18747.hp2 NA18951.hp1 NA18971.hp2 others(1): Show NA18747.hp2 NA18951.hp1 NA18971.hp2 NA19066.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0032 a0001c0001t0001g0177 a0001c0001t0001g0205 others(1): Show a0001c0001t0001g0032 a0001c0001t0001g0177 a0001c0001t0001g0205 a0001c0001t0001g0231	4	264	0.0152	29	c.-66 others(48): Show c.-66-10499_-66-10498insATATATATATATATATATTTTTTTTT TTT	LYPD6B	ENSG00000150556.17	transcript	ENST00000409642.8	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
LYPD6B_chr2_149033699_149220262	149120383	A A	ATATATAT others(22): Show ATATATATATATATATATTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02027.hp2 NA18943.hp1 NA19000.hp2 others(1): Show HG02027.hp2 NA18943.hp1 NA19000.hp2 NA19084.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0012 a0001c0001t0001g0024 a0001c0001t0001g0147 others(1): Show a0001c0001t0001g0012 a0001c0001t0001g0024 a0001c0001t0001g0147 a0001c0001t0001g0219	4	264	0.0152	29	c.-66 others(48): Show c.-66-10499_-66-10498insATATATATATATATATTTTTTTTTTT TTT	LYPD6B	ENSG00000150556.17	transcript	ENST00000409642.8	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
LYPD6B_chr2_149033699_149220262	149120383	A A	ATATATAT others(22): Show ATATATATATATATATTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18964.hp2 NA18964.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0029 a0001c0001t0001g0029	1	264	0.0038	29	c.-66 others(48): Show c.-66-10499_-66-10498insATATATATATATATTTTTTTTTTTTT TTT	LYPD6B	ENSG00000150556.17	transcript	ENST00000409642.8	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr2	TogoVar

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