regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PCSK6_chr15_101298933_101494707 | 101493369 | T | TTCCCTCC others(207): Show |
upstream_gene_variant | MODIFIER | HG01346.hp1 HG02698.hp2 |
a0001 | a0001c0002a0001c0007 | a0001c0002t0001a0001c0007t0002 | a0001c0002t0001g0161a0001c0007t0002g0107 | 2 | 336 | 0.0060 | 214 | c.-37 others(225): Show |
PCSK6 | ENSG00000140479.18 | transcript | ENST00000611716.5 | protein_coding | 3663 | chr15 | TogoVar | ||||||
PDIA2_chr16_278164_292215 | 285909 | C | CCCAACCC others(207): Show |
intron_variant | MODIFIER | HG03490.hp2 | a0007 | a0007c0022 | a0007c0022t0001 | a0007c0022t0001g0167 | 1 | 436 | 0.0023 | 214 | c.111 others(231): Show |
PDIA2 | ENSG00000185615.16 | transcript | ENST00000219406.11 | protein_coding | 7/10 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
PDXK_chr21_43714129_43767299 | 43741350 | G | GGGGGGCT others(207): Show |
intron_variant | MODIFIER | HG02630.hp2 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0325 | 1 | 358 | 0.0028 | 214 | c.143 others(229): Show |
PDXK | ENSG00000160209.19 | transcript | ENST00000291565.9 | protein_coding | 2/10 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |||||
PERM1_chr1_970198_987093 | 977276 | C | CGCTCCCC others(207): Show |
intron_variant | MODIFIER | HG00733.hp1 | a0017 | a0017c0029 | a0017c0029t0001 | a0017c0029t0001g0086 | 1 | 408 | 0.0025 | 214 | c.215 others(231): Show |
PERM1 | ENSG00000187642.10 | transcript | ENST00000433179.4 | protein_coding | 2/3 | chr1 | TogoVar | ||||||
PLEKHG4B_chr5_87168_194966 | 101254 | G | GGAGAGAC others(207): Show |
intron_variant | MODIFIER | HG03041.hp1 | a0013 | a0013c0067 | a0013c0067t0046 | a0013c0067t0046g0186 | 1 | 210 | 0.0048 | 214 | c.45+ others(229): Show |
PLEKHG4B | ENSG00000153404.15 | transcript | ENST00000637938.2 | protein_coding | 1/19 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PNMA5_chrX_152983824_152999116 | 152998738 | T | TTTATATA others(207): Show |
upstream_gene_variant | MODIFIER | HG00140.hp1 HG00408.hp2 HG00741.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0047 | 9 | 286 | 0.0315 | 214 | c.-50 others(225): Show |
PNMA5 | ENSG00000198883.12 | transcript | ENST00000535214.6 | protein_coding | 4623 | chrX | TogoVar | ||||||
PPP6R2_chr22_50338327_50450090 | 50344053 | C | CCCCCCCA others(207): Show |
intron_variant | MODIFIER | HG02027.hp1 | a0001 | a0001c0005 | a0001c0005t0002 | a0001c0005t0002g0089 | 1 | 340 | 0.0029 | 214 | c.-14 others(231): Show |
PPP6R2 | ENSG00000100239.16 | transcript | ENST00000612753.5 | protein_coding | 1/23 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | |||||
PPP6R2_chr22_50338327_50450090 | 50344164 | T | TCCTCCAG others(207): Show |
intron_variant | MODIFIER | NA18980.hp2 NA19010.hp1 |
a0001 | a0001c0005 | a0001c0005t0002 | a0001c0005t0002g0101a0001c0005t0002g0102 | 2 | 340 | 0.0059 | 214 | c.-14 others(231): Show |
PPP6R2 | ENSG00000100239.16 | transcript | ENST00000612753.5 | protein_coding | 1/23 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | |||||
PPP6R2_chr22_50338327_50450090 | 50397547 | A | AGGGGGGC others(207): Show |
intron_variant | MODIFIER | NA18969.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0265 | 1 | 340 | 0.0029 | 214 | c.227 others(231): Show |
PPP6R2 | ENSG00000100239.16 | transcript | ENST00000612753.5 | protein_coding | 3/23 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | |||||
PRKCB_chr16_23830983_24225611 | 23981838 | C | CTTTCCCT others(207): Show |
intron_variant | MODIFIER | HG00423.hp1 HG00423.hp2 HG00639.hp1 others(65): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(11): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(60): Show | a0001c0001t0002g0129a0001c0001t0003g0105a0001c0001t0003g0117others(65): Show | 68 | 148 | 0.4595 | 214 | c.206 others(231): Show |
PRKCB | ENSG00000166501.14 | transcript | ENST00000643927.1 | protein_coding | 2/16 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
PRPF31_chr19_54110754_54136713 | 54133982 | T | TCCACCTC others(207): Show |
downstream_gene_variant | MODIFIER | NA19012.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0012 | 1 | 227 | 0.0044 | 214 | c.*25 others(225): Show |
PRPF31 | ENSG00000105618.14 | transcript | ENST00000321030.9 | protein_coding | 2270 | chr19 | TogoVar | ||||||
PSME3_chr17_42828397_42848760 | 42848544 | T | TATATATA others(207): Show |
downstream_gene_variant | MODIFIER | HG01109.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0015 | 1 | 264 | 0.0038 | 214 | c.*69 others(225): Show |
PSME3 | ENSG00000131467.12 | transcript | ENST00000590720.6 | protein_coding | 4785 | chr17 | TogoVar | ||||||
PTPRG_chr3_61556571_62302609 | 61885680 | T | TCCTCTCC others(207): Show |
intron_variant | MODIFIER | NA18522.hp1 | a0002 | a0002c0003 | a0002c0003t0002 | a0002c0003t0002g0061 | 1 | 94 | 0.0106 | 214 | c.191 others(235): Show |
PTPRG | ENSG00000144724.20 | transcript | ENST00000474889.6 | protein_coding | 2/29 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
PTPRG_chr3_61556571_62302609 | 61885680 | T | TCCTCTCC others(207): Show |
intron_variant | MODIFIER | HG03098.hp1 | a0007 | a0007c0009 | a0007c0009t0002 | a0007c0009t0002g0032 | 1 | 94 | 0.0106 | 214 | c.191 others(235): Show |
PTPRG | ENSG00000144724.20 | transcript | ENST00000474889.6 | protein_coding | 2/29 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
PTPRG_chr3_61556571_62302609 | 61987705 | T | TAAAATTC others(207): Show |
intron_variant | MODIFIER | NA19030.hp1 | a0001 | a0001c0001 | a0001c0001t0010 | a0001c0001t0010g0087 | 1 | 94 | 0.0106 | 214 | c.191 others(231): Show |
PTPRG | ENSG00000144724.20 | transcript | ENST00000474889.6 | protein_coding | 2/29 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
PTPRT_chr20_42067756_43194906 | 42993527 | C | CATATATT others(207): Show |
intron_variant | MODIFIER | HG01109.hp2 HG01261.hp2 |
a0004a0007 | a0004c0020a0007c0010 | a0004c0020t0016a0007c0010t0009 | a0004c0020t0016g0029a0007c0010t0009g0021 | 2 | 62 | 0.0323 | 214 | c.89- others(233): Show |
PTPRT | ENSG00000196090.14 | transcript | ENST00000373187.6 | protein_coding | 1/30 | chr20 | TogoVar | ||||||
PTTG1IP_chr21_44844598_44878690 | 44863291 | G | GCCACGGC others(207): Show |
intron_variant | MODIFIER | HG02486.hp2 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0125 | 1 | 444 | 0.0023 | 214 | c.169 others(231): Show |
PTTG1IP | ENSG00000183255.12 | transcript | ENST00000330938.8 | protein_coding | 2/5 | chr21 | TogoVar | ||||||
RAB3C_chr5_58578075_58864394 | 58597109 | T | TATATATA others(207): Show |
intron_variant | MODIFIER | HG01070.hp1 HG01071.hp1 |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0089a0001c0001t0003g0090 | 2 | 220 | 0.0091 | 214 | c.24+ others(231): Show |
RAB3C | ENSG00000152932.8 | transcript | ENST00000282878.6 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
RAD17_chr5_69364818_69419801 | 69377594 | T | TGCATATA others(207): Show |
intron_variant | MODIFIER | HG01071.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0120 | 1 | 359 | 0.0028 | 214 | c.351 others(231): Show |
RAD17 | ENSG00000152942.19 | transcript | ENST00000354868.10 | protein_coding | 6/18 | chr5 | TogoVar | ||||||
RAI14_chr5_34651328_34837612 | 34665007 | A | ATATATAT others(207): Show |
intron_variant | MODIFIER | HG02895.hp1 HG03130.hp2 HG03209.hp1 |
a0001a0002 | a0001c0001a0002c0005 | a0001c0001t0003a0002c0005t0004 | a0001c0001t0003g0158a0001c0001t0003g0240a0002c0005t0004g0157 | 3 | 254 | 0.0118 | 214 | c.-49 others(231): Show |
RAI14 | ENSG00000039560.14 | transcript | ENST00000265109.8 | protein_coding | 1/17 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
RBCK1_chr20_403299_437139 | 420665 | G | GCCCACCC others(207): Show |
intron_variant | MODIFIER | HG02895.hp2 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0241 | 1 | 452 | 0.0022 | 214 | c.757 others(229): Show |
RBCK1 | ENSG00000125826.22 | transcript | ENST00000356286.10 | protein_coding | 6/11 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
RBCK1_chr20_403299_437139 | 420665 | G | GCCCACCC others(207): Show |
intron_variant | MODIFIER | NA18972.hp2 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0254 | 1 | 452 | 0.0022 | 214 | c.757 others(229): Show |
RBCK1 | ENSG00000125826.22 | transcript | ENST00000356286.10 | protein_coding | 6/11 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
REPS2_chrX_16941658_17158272 | 17050141 | C | CCTTCCTT others(207): Show |
intron_variant | MODIFIER | NA19006.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0040 | 1 | 166 | 0.0060 | 214 | c.908 others(231): Show |
REPS2 | ENSG00000169891.18 | transcript | ENST00000357277.8 | protein_coding | 6/17 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
RIPOR3_chr20_50581108_50696542 | 50666181 | C | CCTTCCCT others(207): Show |
intron_variant | MODIFIER | HG03516.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0121 | 1 | 280 | 0.0036 | 214 | c.3+2 others(229): Show |
RIPOR3 | ENSG00000042062.13 | transcript | ENST00000327979.8 | protein_coding | 1/21 | chr20 | TogoVar | ||||||
RNF182_chr6_13919952_13985310 | 13925069 | G | GGGTGGGG others(207): Show |
intron_variant | MODIFIER | HG02559.hp2 | a0001 | a0001c0001 | a0001c0001t0031 | a0001c0001t0031g0307 | 1 | 356 | 0.0028 | 214 | c.-36 others(229): Show |
RNF182 | ENSG00000180537.13 | transcript | ENST00000488300.6 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
RPA3_chr7_7631518_7723607 | 7679342 | T | TACATGTT others(207): Show |
intron_variant | MODIFIER | HG02698.hp1 NA19076.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0016 | a0001c0001t0001g0207a0001c0001t0016g0152 | 2 | 308 | 0.0065 | 214 | c.-75 others(233): Show |
RPA3 | ENSG00000106399.11 | transcript | ENST00000223129.8 | protein_coding | 4/7 | chr7 | TogoVar | ||||||
RPH3AL_chr17_207389_357807 | 288621 | T | TCTCTCCA others(207): Show |
intron_variant | MODIFIER | HG01243.hp2 | a0001 | a0001c0001 | a0001c0001t0022 | a0001c0001t0022g0071 | 1 | 133 | 0.0075 | 214 | c.352 others(231): Show |
RPH3AL | ENSG00000181031.16 | transcript | ENST00000331302.12 | protein_coding | 5/9 | chr17 | TogoVar | ||||||
RPH3AL_chr17_207389_357807 | 317207 | C | CCACCTCC others(207): Show |
intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00323.hp2 others(19): Show |
a0001a0004a0005 | a0001c0001a0004c0007a0005c0010 | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(12): Show | a0001c0001t0001g0086a0001c0001t0001g0089a0001c0001t0001g0133others(19): Show | 22 | 133 | 0.1654 | 214 | c.351 others(231): Show |
RPH3AL | ENSG00000181031.16 | transcript | ENST00000331302.12 | protein_coding | 5/9 | chr17 | TogoVar | ||||||
RSPH1_chr21_42467486_42501224 | 42477027 | G | GCCCCCTC others(207): Show |
intron_variant | MODIFIER | NA20905.hp1 | a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0079 | 1 | 408 | 0.0025 | 214 | c.727 others(229): Show |
RSPH1 | ENSG00000160188.10 | transcript | ENST00000291536.8 | protein_coding | 7/8 | chr21 | TogoVar | ||||||
RSPH1_chr21_42467486_42501224 | 42477029 | C | CCCCTCCA others(207): Show |
intron_variant | MODIFIER | HG02615.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0244 | 1 | 408 | 0.0025 | 214 | c.727 others(229): Show |
RSPH1 | ENSG00000160188.10 | transcript | ENST00000291536.8 | protein_coding | 7/8 | chr21 | TogoVar | ||||||
RSPH1_chr21_42467486_42501224 | 42477225 | C | CCCCTCCA others(207): Show |
intron_variant | MODIFIER | HG01069.hp2 HG01071.hp2 |
a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0013 | 2 | 408 | 0.0049 | 214 | c.727 others(227): Show |
RSPH1 | ENSG00000160188.10 | transcript | ENST00000291536.8 | protein_coding | 7/8 | chr21 | TogoVar | ||||||
RSPH1_chr21_42467486_42501224 | 42477225 | C | CCCCTCCA others(207): Show |
intron_variant | MODIFIER | NA19062.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0061 | 1 | 408 | 0.0025 | 214 | c.727 others(227): Show |
RSPH1 | ENSG00000160188.10 | transcript | ENST00000291536.8 | protein_coding | 7/8 | chr21 | TogoVar | ||||||
RSPH1_chr21_42467486_42501224 | 42477225 | C | CCCCTCCA others(207): Show |
intron_variant | MODIFIER | HG01255.hp2 HG01433.hp1 |
a0002 | a0002c0003 | a0002c0003t0001 | a0002c0003t0001g0332a0002c0003t0001g0345 | 2 | 408 | 0.0049 | 214 | c.727 others(227): Show |
RSPH1 | ENSG00000160188.10 | transcript | ENST00000291536.8 | protein_coding | 7/8 | chr21 | TogoVar | ||||||
SAMD10_chr20_63969116_63984642 | 63970825 | C | CCTTCCTT others(207): Show |
downstream_gene_variant | MODIFIER | HG03654.hp2 HG04228.hp1 |
a0001 | a0001c0002 | a0001c0002t0005 | a0001c0002t0005g0018 | 2 | 342 | 0.0059 | 214 | c.*46 others(225): Show |
SAMD10 | ENSG00000130590.14 | transcript | ENST00000369886.8 | protein_coding | 3290 | chr20 | TogoVar | ||||||
SCIMP_chr17_5203920_5239860 | 5232378 | A | ATAAACAG others(207): Show |
intron_variant | MODIFIER | HG02717.hp1 HG02895.hp1 HG02897.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0009 | a0001c0001t0001g0126a0001c0001t0001g0343a0001c0001t0009g0123others(2): Show | 5 | 386 | 0.0130 | 214 | c.21+ others(229): Show |
SCIMP | ENSG00000161929.15 | transcript | ENST00000574081.6 | protein_coding | 1/4 | chr17 | TogoVar | ||||||
SCNN1B_chr16_23297302_23386294 | 23379121 | A | ACCCAGCC others(207): Show |
intron_variant | MODIFIER | HG03471.hp2 HG03579.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0098a0001c0001t0001g0273 | 2 | 306 | 0.0065 | 214 | c.146 others(231): Show |
SCNN1B | ENSG00000168447.11 | transcript | ENST00000343070.7 | protein_coding | 11/12 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
SDCCAG8_chr1_243251041_243505091 | 243480824 | T | TGGATGGA others(207): Show |
intron_variant | MODIFIER | HG01167.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0120 | 1 | 189 | 0.0053 | 214 | c.198 others(233): Show |
SDCCAG8 | ENSG00000054282.16 | transcript | ENST00000366541.8 | protein_coding | 16/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
SHISA9_chr16_12896598_13245416 | 13015951 | T | TTTCCCTT others(207): Show |
intron_variant | MODIFIER | HG00673.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0147 | 1 | 214 | 0.0047 | 214 | c.691 others(233): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
SHISA9_chr16_12896598_13245416 | 13015951 | T | TTTCCCTT others(207): Show |
intron_variant | MODIFIER | HG02293.hp1 | a0001 | a0001c0001 | a0001c0001t0010 | a0001c0001t0010g0188 | 1 | 214 | 0.0047 | 214 | c.691 others(233): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
SKI_chr1_2223319_2315213 | 2280735 | G | GGACGCCC others(207): Show |
intron_variant | MODIFIER | HG02015.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0247 | 1 | 330 | 0.0030 | 214 | c.970 others(233): Show |
SKI | ENSG00000157933.11 | transcript | ENST00000378536.5 | protein_coding | 1/6 | chr1 | TogoVar | ||||||
SKI_chr1_2223319_2315213 | 2281252 | G | GGACGCCC others(207): Show |
intron_variant | MODIFIER | NA19082.hp1 | a0001 | a0001c0001 | a0001c0001t0010 | a0001c0001t0010g0048 | 1 | 330 | 0.0030 | 214 | c.970 others(233): Show |
SKI | ENSG00000157933.11 | transcript | ENST00000378536.5 | protein_coding | 1/6 | chr1 | TogoVar | ||||||
SKI_chr1_2223319_2315213 | 2281252 | G | GGATGCCC others(207): Show |
intron_variant | MODIFIER | HG01258.hp1 | a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0002 | 1 | 330 | 0.0030 | 214 | c.970 others(233): Show |
SKI | ENSG00000157933.11 | transcript | ENST00000378536.5 | protein_coding | 1/6 | chr1 | TogoVar | ||||||
SLC19A1_chr21_45507565_45547440 | 45531209 | G | GCCTCCGG others(207): Show |
intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp2 others(133): Show |
a0002a0007a0008 | a0002c0002a0002c0003a0002c0006others(2): Show | a0002c0002t0002a0002c0002t0004a0002c0002t0005others(19): Show | a0002c0002t0002g0001a0002c0002t0002g0017a0002c0002t0002g0018others(109): Show | 136 | 318 | 0.4277 | 214 | c.949 others(229): Show |
SLC19A1 | ENSG00000173638.19 | transcript | ENST00000311124.9 | protein_coding | 3/5 | chr21 | TogoVar | ||||||
SLC2A5_chr1_9030106_9074635 | 9053455 | A | ATATATAT others(207): Show |
intron_variant | MODIFIER | NA19090.hp2 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0212 | 1 | 336 | 0.0030 | 214 | c.293 others(231): Show |
SLC2A5 | ENSG00000142583.18 | transcript | ENST00000377424.9 | protein_coding | 3/11 | chr1 | TogoVar | ||||||
SLC35F1_chr6_117902264_118322671 | 117923680 | T | TATGTACA others(207): Show |
intron_variant | MODIFIER | NA18946.hp1 NA18979.hp1 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0013 | a0001c0001t0002g0125a0001c0001t0013g0129 | 2 | 182 | 0.0110 | 214 | c.173 others(233): Show |
SLC35F1 | ENSG00000196376.11 | transcript | ENST00000360388.9 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
SLC35F1_chr6_117902264_118322671 | 117923718 | C | CATATATG others(207): Show |
intron_variant | MODIFIER | HG02630.hp1 | a0001 | a0001c0001 | a0001c0001t0024 | a0001c0001t0024g0105 | 1 | 182 | 0.0055 | 214 | c.173 others(233): Show |
SLC35F1 | ENSG00000196376.11 | transcript | ENST00000360388.9 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
SLC45A4_chr8_141202174_141313288 | 141203505 | G | GGAGAGAG others(207): Show |
downstream_gene_variant | MODIFIER | HG02155.hp2 NA18973.hp1 NA18975.hp2 |
a0002 | a0002c0001 | a0002c0001t0001a0002c0001t0003a0002c0001t0020 | a0002c0001t0001g0159a0002c0001t0003g0185a0002c0001t0020g0127 | 3 | 188 | 0.0160 | 214 | c.*80 others(225): Show |
SLC45A4 | ENSG00000022567.10 | transcript | ENST00000517878.6 | protein_coding | 3668 | chr8 | TogoVar | ||||||
SMAD2_chr18_47803957_47935659 | 47850314 | A | ATATATTA others(207): Show |
intron_variant | MODIFIER | HG00642.hp2 NA20805.hp1 |
a0001 | a0001c0001 | a0001c0001t0014a0001c0001t0086 | a0001c0001t0014g0115a0001c0001t0086g0116 | 2 | 310 | 0.0065 | 214 | c.784 others(229): Show |
SMAD2 | ENSG00000175387.16 | transcript | ENST00000262160.11 | protein_coding | 7/10 | chr18 | TogoVar | ||||||
SMIM36_chr17_55444856_55516452 | 55501401 | T | TTATATAT others(207): Show |
intron_variant | MODIFIER | NA19030.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0276 | 1 | 340 | 0.0029 | 214 | c.*17 others(233): Show |
SMIM36 | ENSG00000261873.3 | transcript | ENST00000636752.2 | protein_coding | 1/4 | chr17 | TogoVar | ||||||
SNX6_chr14_34556093_34635148 | 34557531 | T | TCTTCTTC others(207): Show |
downstream_gene_variant | MODIFIER | HG02630.hp2 | a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0001 | 1 | 322 | 0.0031 | 214 | c.*55 others(225): Show |
SNX6 | ENSG00000129515.20 | transcript | ENST00000362031.10 | protein_coding | 3561 | chr14 | TogoVar |