regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SAT1_chrX_23778173_23791210 | 23780146 | T | TACGTATA others(203): Show |
upstream_gene_variant | MODIFIER | HG01069.hp1 HG01071.hp2 NA18962.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0005a0001c0001t0001g0006 | 6 | 330 | 0.0182 | 210 | c.-32 others(221): Show |
SAT1 | ENSG00000130066.17 | transcript | ENST00000379270.5 | protein_coding | 3026 | chrX | TogoVar | ||||||
SCGB1C1_chr11_188078_199575 | 196540 | G | GGGGGGAC others(203): Show |
downstream_gene_variant | MODIFIER | HG02717.hp1 | a0002 | a0002c0001 | a0002c0001t0002 | a0002c0001t0002g0001 | 1 | 354 | 0.0028 | 210 | c.*20 others(221): Show |
SCGB1C1 | ENSG00000188076.3 | transcript | ENST00000342878.3 | protein_coding | 1966 | chr11 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159680706 | T | TATATATA others(203): Show |
intron_variant | MODIFIER | HG02622.hp1 HG02886.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0002 | a0001c0001t0001g0031a0001c0002t0002g0047 | 2 | 100 | 0.0200 | 210 | c.64- others(227): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
SCHIP1_chr3_159268244_159902359 | 159680727 | T | TAATATAC others(203): Show |
intron_variant | MODIFIER | HG00438.hp1 HG01978.hp1 NA18747.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0008a0001c0001t0001g0013a0001c0001t0001g0064 | 3 | 100 | 0.0300 | 210 | c.64- others(227): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
SCIMP_chr17_5203920_5239860 | 5232378 | A | ATAAACAG others(203): Show |
intron_variant | MODIFIER | HG00408.hp2 HG01496.hp2 HG01928.hp1 others(22): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0003a0001c0002t0002others(1): Show | a0001c0001t0001g0008a0001c0001t0001g0020a0001c0001t0001g0187others(19): Show | 25 | 386 | 0.0648 | 210 | c.21+ others(225): Show |
SCIMP | ENSG00000161929.15 | transcript | ENST00000574081.6 | protein_coding | 1/4 | chr17 | TogoVar | ||||||
SCIMP_chr17_5203920_5239860 | 5232378 | A | ATAAACAG others(203): Show |
intron_variant | MODIFIER | HG01069.hp2 HG01071.hp2 HG01358.hp1 |
a0001 | a0001c0003 | a0001c0003t0005 | a0001c0003t0005g0310a0001c0003t0005g0311a0001c0003t0005g0312 | 3 | 386 | 0.0078 | 210 | c.21+ others(225): Show |
SCIMP | ENSG00000161929.15 | transcript | ENST00000574081.6 | protein_coding | 1/4 | chr17 | TogoVar | ||||||
SCIMP_chr17_5203920_5239860 | 5232378 | A | ATAAACAG others(203): Show |
intron_variant | MODIFIER | HG01975.hp2 HG02300.hp2 NA18975.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0018a0001c0001t0001g0179 | 3 | 386 | 0.0078 | 210 | c.21+ others(225): Show |
SCIMP | ENSG00000161929.15 | transcript | ENST00000574081.6 | protein_coding | 1/4 | chr17 | TogoVar | ||||||
SCIMP_chr17_5203920_5239860 | 5232378 | A | ATAAACAG others(203): Show |
intron_variant | MODIFIER | HG01978.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0182 | 1 | 386 | 0.0026 | 210 | c.21+ others(225): Show |
SCIMP | ENSG00000161929.15 | transcript | ENST00000574081.6 | protein_coding | 1/4 | chr17 | TogoVar | ||||||
SCLY_chr2_238056001_238104413 | 238098619 | G | GGGAACGC others(203): Show |
3_prime_UTR_variant | MODIFIER | HG01993.hp2 | a0005 | a0005c0019 | a0005c0019t0087 | a0005c0019t0087g0123 | 1 | 392 | 0.0026 | 210 | c.*26 others(219): Show |
SCLY | ENSG00000132330.18 | transcript | ENST00000254663.12 | protein_coding | 12/12 | 268 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||
SCLY_chr2_238056001_238104413 | 238098626 | C | CCCACATA others(203): Show |
3_prime_UTR_variant | MODIFIER | HG01256.hp1 HG01258.hp2 |
a0001 | a0001c0001 | a0001c0001t0054 | a0001c0001t0054g0189a0001c0001t0054g0190 | 2 | 392 | 0.0051 | 210 | c.*27 others(219): Show |
SCLY | ENSG00000132330.18 | transcript | ENST00000254663.12 | protein_coding | 12/12 | 278 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||
SCLY_chr2_238056001_238104413 | 238098626 | C | CCCACATA others(203): Show |
3_prime_UTR_variant | MODIFIER | HG02055.hp2 HG02451.hp2 HG02622.hp2 others(6): Show |
a0003 | a0003c0006 | a0003c0006t0007 | a0003c0006t0007g0037a0003c0006t0007g0294a0003c0006t0007g0295others(5): Show | 9 | 392 | 0.0230 | 210 | c.*27 others(219): Show |
SCLY | ENSG00000132330.18 | transcript | ENST00000254663.12 | protein_coding | 12/12 | 278 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||
SCNN1D_chr1_1275436_1297025 | 1289785 | C | CCGTGTCT others(203): Show |
intron_variant | MODIFIER | NA19079.hp2 | a0002 | a0002c0003 | a0002c0003t0002 | a0002c0003t0002g0101 | 1 | 290 | 0.0035 | 210 | c.166 others(227): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
SEMA3E_chr7_83358238_83654139 | 83389951 | T | TATTACAT others(203): Show |
intron_variant | MODIFIER | HG02572.hp2 | a0001 | a0001c0003 | a0001c0003t0002 | a0001c0003t0002g0155 | 1 | 226 | 0.0044 | 210 | c.166 others(229): Show |
SEMA3E | ENSG00000170381.15 | transcript | ENST00000643230.2 | protein_coding | 14/16 | chr7 | TogoVar | ||||||
SGCD_chr5_156322164_156772788 | 156423193 | A | AATATTAT others(203): Show |
intron_variant | MODIFIER | HG02129.hp2 NA19030.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0027 | a0001c0001t0001g0015a0001c0001t0027g0011 | 2 | 150 | 0.0133 | 210 | c.192 others(229): Show |
SGCD | ENSG00000170624.14 | transcript | ENST00000337851.9 | protein_coding | 3/8 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
SGCD_chr5_156322164_156772788 | 156423193 | A | AATATTAT others(203): Show |
intron_variant | MODIFIER | HG02723.hp1 | a0001 | a0001c0001 | a0001c0001t0014 | a0001c0001t0014g0048 | 1 | 150 | 0.0067 | 210 | c.192 others(229): Show |
SGCD | ENSG00000170624.14 | transcript | ENST00000337851.9 | protein_coding | 3/8 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
SH2D4B_chr10_80532902_80651560 | 80543916 | T | TTGTCTAG others(203): Show |
intron_variant | MODIFIER | HG02622.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0288 | 1 | 322 | 0.0031 | 210 | c.184 others(227): Show |
SH2D4B | ENSG00000178217.15 | transcript | ENST00000646907.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
SH2D4B_chr10_80532902_80651560 | 80543916 | T | TTGTCTAG others(203): Show |
intron_variant | MODIFIER | HG00280.hp1 HG00323.hp1 HG00558.hp1 others(137): Show |
a0001a0002a0003others(13): Show | a0001c0001a0001c0006a0001c0010others(22): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(50): Show | a0001c0001t0001g0029a0001c0001t0001g0065a0001c0001t0001g0132others(136): Show | 140 | 322 | 0.4348 | 210 | c.184 others(227): Show |
SH2D4B | ENSG00000178217.15 | transcript | ENST00000646907.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
SHCBP1L_chr1_182894865_182958166 | 182924788 | G | GAAAGAAA others(203): Show |
intron_variant | MODIFIER | HG01123.hp1 | a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0292 | 1 | 302 | 0.0033 | 210 | c.118 others(229): Show |
SHCBP1L | ENSG00000157060.16 | transcript | ENST00000367547.8 | protein_coding | 6/9 | chr1 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13015951 | T | TTTCCCTT others(203): Show |
intron_variant | MODIFIER | NA19012.hp1 | a0001 | a0001c0001 | a0001c0001t0016 | a0001c0001t0016g0200 | 1 | 214 | 0.0047 | 210 | c.691 others(229): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
SHISA9_chr16_12896598_13245416 | 13015951 | T | TTTCCCTT others(203): Show |
intron_variant | MODIFIER | HG01891.hp2 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0081 | 1 | 214 | 0.0047 | 210 | c.691 others(229): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
SHROOM2_chrX_9781429_9954443 | 9791969 | G | GAGAATAG others(203): Show |
intron_variant | MODIFIER | HG02135.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0034 | 1 | 256 | 0.0039 | 210 | c.165 others(227): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
SIGIRR_chr11_400716_419999 | 401808 | G | GGCCCCGC others(203): Show |
downstream_gene_variant | MODIFIER | NA18978.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0052 | 1 | 242 | 0.0041 | 210 | c.*40 others(221): Show |
SIGIRR | ENSG00000185187.13 | transcript | ENST00000431843.7 | protein_coding | 3907 | chr11 | TogoVar | ||||||
SIGIRR_chr11_400716_419999 | 402043 | C | CCCCGCTC others(203): Show |
downstream_gene_variant | MODIFIER | NA19030.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0061 | 1 | 242 | 0.0041 | 210 | c.*38 others(221): Show |
SIGIRR | ENSG00000185187.13 | transcript | ENST00000431843.7 | protein_coding | 3672 | chr11 | TogoVar | ||||||
SIGIRR_chr11_400716_419999 | 411476 | A | AGGGGGGG others(203): Show |
intron_variant | MODIFIER | HG02056.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0150 | 1 | 242 | 0.0041 | 210 | c.-15 others(229): Show |
SIGIRR | ENSG00000185187.13 | transcript | ENST00000431843.7 | protein_coding | 1/9 | chr11 | TogoVar | ||||||
SIGIRR_chr11_400716_419999 | 411476 | A | AGGGGGGT others(203): Show |
intron_variant | MODIFIER | HG02148.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0136 | 1 | 242 | 0.0041 | 210 | c.-15 others(229): Show |
SIGIRR | ENSG00000185187.13 | transcript | ENST00000431843.7 | protein_coding | 1/9 | chr11 | TogoVar | ||||||
SLC12A1_chr15_48201302_48309078 | 48270750 | G | GTATATAT others(203): Show |
intron_variant | MODIFIER | NA19066.hp2 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0035 | 1 | 266 | 0.0038 | 210 | c.240 others(229): Show |
SLC12A1 | ENSG00000074803.21 | transcript | ENST00000380993.8 | protein_coding | 19/26 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
SLC12A1_chr15_48201302_48309078 | 48270750 | G | GTATATAT others(203): Show |
intron_variant | MODIFIER | NA18949.hp2 NA18974.hp2 NA19003.hp2 others(1): Show |
a0001 | a0001c0004 | a0001c0004t0001 | a0001c0004t0001g0079a0001c0004t0001g0123a0001c0004t0001g0164others(1): Show | 4 | 266 | 0.0150 | 210 | c.240 others(229): Show |
SLC12A1 | ENSG00000074803.21 | transcript | ENST00000380993.8 | protein_coding | 19/26 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
SLC25A41_chr19_6421037_6438763 | 6429421 | A | AAGGGAGA others(203): Show |
intron_variant | MODIFIER | HG02922.hp1 HG03130.hp1 HG03453.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0191a0001c0001t0001g0192a0001c0001t0001g0193 | 3 | 350 | 0.0086 | 210 | c.624 others(225): Show |
SLC25A41 | ENSG00000181240.14 | transcript | ENST00000321510.7 | protein_coding | 4/6 | chr19 | TogoVar | ||||||
SLC2A8_chr9_127392169_127412898 | 127409080 | T | TGGGGGAG others(203): Show |
downstream_gene_variant | MODIFIER | HG02630.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0118 | 1 | 418 | 0.0024 | 210 | c.*18 others(221): Show |
SLC2A8 | ENSG00000136856.18 | transcript | ENST00000373371.8 | protein_coding | 1183 | chr9 | TogoVar | ||||||
SLC2A8_chr9_127392169_127412898 | 127409089 | C | CGATGGGG others(203): Show |
downstream_gene_variant | MODIFIER | NA18966.hp1 NA19068.hp1 |
a0001 | a0001c0004 | a0001c0004t0004 | a0001c0004t0004g0007 | 2 | 418 | 0.0048 | 210 | c.*18 others(221): Show |
SLC2A8 | ENSG00000136856.18 | transcript | ENST00000373371.8 | protein_coding | 1192 | chr9 | TogoVar | ||||||
SLC35F1_chr6_117902264_118322671 | 117923702 | T | TATGTACA others(203): Show |
intron_variant | MODIFIER | NA18972.hp2 | a0001 | a0001c0001 | a0001c0001t0011 | a0001c0001t0011g0086 | 1 | 182 | 0.0055 | 210 | c.173 others(229): Show |
SLC35F1 | ENSG00000196376.11 | transcript | ENST00000360388.9 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
SLC45A4_chr8_141202174_141313288 | 141203522 | G | GAGAGGGA others(203): Show |
downstream_gene_variant | MODIFIER | NA18970.hp2 | a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0052 | 1 | 188 | 0.0053 | 210 | c.*80 others(221): Show |
SLC45A4 | ENSG00000022567.10 | transcript | ENST00000517878.6 | protein_coding | 3651 | chr8 | TogoVar | ||||||
SLC6A11_chr3_10811228_10945714 | 10873384 | T | TTTATCCT others(203): Show |
intron_variant | MODIFIER | HG02280.hp1 HG02723.hp1 HG02922.hp1 others(5): Show |
a0001 | a0001c0002 | a0001c0002t0002a0001c0002t0018 | a0001c0002t0002g0009a0001c0002t0002g0033a0001c0002t0002g0238others(5): Show | 8 | 362 | 0.0221 | 210 | c.757 others(227): Show |
SLC6A11 | ENSG00000132164.10 | transcript | ENST00000254488.7 | protein_coding | 5/13 | chr3 | TogoVar | ||||||
SLC6A11_chr3_10811228_10945714 | 10873409 | C | CCTATCCT others(203): Show |
intron_variant | MODIFIER | HG01884.hp1 HG02109.hp1 HG02976.hp1 others(1): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0007a0001c0003t0007 | a0001c0001t0007g0114a0001c0001t0007g0191a0001c0001t0007g0192others(1): Show | 4 | 362 | 0.0111 | 210 | c.757 others(227): Show |
SLC6A11 | ENSG00000132164.10 | transcript | ENST00000254488.7 | protein_coding | 5/13 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
SLC7A10_chr19_33203664_33230850 | 33218682 | T | TTTCTTTC others(203): Show |
intron_variant | MODIFIER | NA19084.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0102 | 1 | 410 | 0.0024 | 210 | c.152 others(227): Show |
SLC7A10 | ENSG00000130876.11 | transcript | ENST00000253188.8 | protein_coding | 1/10 | chr19 | TogoVar | ||||||
SLC7A10_chr19_33203664_33230850 | 33218682 | T | TTTCTTTC others(203): Show |
intron_variant | MODIFIER | HG04204.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0141 | 1 | 410 | 0.0024 | 210 | c.152 others(227): Show |
SLC7A10 | ENSG00000130876.11 | transcript | ENST00000253188.8 | protein_coding | 1/10 | chr19 | TogoVar | ||||||
SLC8A1_chr2_40092270_40457090 | 40200241 | T | TATATATA others(203): Show |
intron_variant | MODIFIER | HG03540.hp2 | a0001 | a0001c0001 | a0001c0001t0188 | a0001c0001t0188g0057 | 1 | 236 | 0.0042 | 210 | c.180 others(231): Show |
SLC8A1 | ENSG00000183023.19 | transcript | ENST00000332839.9 | protein_coding | 2/10 | chr2 | TogoVar | ||||||
SLC9A3_chr5_465456_529449 | 495377 | G | GCTCCCCG others(203): Show |
intron_variant | MODIFIER | HG02148.hp1 | a0001 | a0001c0027 | a0001c0027t0007 | a0001c0027t0007g0136 | 1 | 218 | 0.0046 | 210 | c.212 others(227): Show |
SLC9A3 | ENSG00000066230.12 | transcript | ENST00000264938.8 | protein_coding | 1/16 | chr5 | TogoVar | ||||||
SLMAP_chr3_57751309_57935003 | 57794196 | T | TAGTGTGC others(203): Show |
intron_variant | MODIFIER | HG03453.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0009 | 1 | 310 | 0.0032 | 210 | c.198 others(229): Show |
SLMAP | ENSG00000163681.17 | transcript | ENST00000671191.1 | protein_coding | 2/24 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
SNTG2_chr2_945849_1372613 | 1222457 | A | AGCTGGAG others(203): Show |
intron_variant | MODIFIER | HG02148.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0178 | 1 | 190 | 0.0053 | 210 | c.719 others(229): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 9/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SNTG2_chr2_945849_1372613 | 1222457 | A | AGCTGGAG others(203): Show |
intron_variant | MODIFIER | HG03710.hp1 | a0003 | a0003c0007 | a0003c0007t0001 | a0003c0007t0001g0080 | 1 | 190 | 0.0053 | 210 | c.719 others(229): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 9/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SNTG2_chr2_945849_1372613 | 1222487 | A | AGCGGCGC others(203): Show |
intron_variant | MODIFIER | HG02615.hp2 | a0018 | a0018c0023 | a0018c0023t0001 | a0018c0023t0001g0048 | 1 | 190 | 0.0053 | 210 | c.719 others(229): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 9/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SNTG2_chr2_945849_1372613 | 1222489 | T | TGGTGCAG others(203): Show |
intron_variant | MODIFIER | NA19084.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0039 | 1 | 190 | 0.0053 | 210 | c.719 others(229): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 9/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SNTG2_chr2_945849_1372613 | 1222599 | C | CTGGAGGT others(203): Show |
intron_variant | MODIFIER | HG01106.hp2 NA18963.hp1 NA20905.hp2 |
a0002 | a0002c0003a0002c0005 | a0002c0003t0001a0002c0005t0001 | a0002c0003t0001g0148a0002c0003t0001g0161a0002c0005t0001g0114 | 3 | 190 | 0.0158 | 210 | c.719 others(229): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 9/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SNTG2_chr2_945849_1372613 | 1222639 | A | ATGGAGGG others(203): Show |
intron_variant | MODIFIER | HG02976.hp2 | a0003 | a0003c0008 | a0003c0008t0001 | a0003c0008t0001g0044 | 1 | 190 | 0.0053 | 210 | c.719 others(229): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 9/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SNTG2_chr2_945849_1372613 | 1222647 | C | CGTCTCCC others(203): Show |
intron_variant | MODIFIER | NA18943.hp2 | a0002 | a0002c0003 | a0002c0003t0001 | a0002c0003t0001g0175 | 1 | 190 | 0.0053 | 210 | c.719 others(229): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 9/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SOAT1_chr1_179288797_179363680 | 179353211 | A | ATATATAT others(203): Show |
intron_variant | MODIFIER | NA18948.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0197 | 1 | 382 | 0.0026 | 210 | c.159 others(227): Show |
SOAT1 | ENSG00000057252.13 | transcript | ENST00000367619.8 | protein_coding | 15/15 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
SPATC1L_chr21_46156160_46189459 | 46161025 | G | GTGGAGGG others(203): Show |
downstream_gene_variant | MODIFIER | HG01891.hp2 NA20129.hp2 |
a0001 | a0001c0001 | a0001c0001t0008a0001c0001t0029 | a0001c0001t0008g0198a0001c0001t0029g0178 | 2 | 251 | 0.0080 | 210 | c.*35 others(219): Show |
SPATC1L | ENSG00000160284.15 | transcript | ENST00000291672.6 | protein_coding | 134 | chr21 | TogoVar | ||||||
SPATC1L_chr21_46156160_46189459 | 46161025 | G | GTGGAGGG others(203): Show |
downstream_gene_variant | MODIFIER | HG01069.hp1 | a0001 | a0001c0001 | a0001c0001t0008 | a0001c0001t0008g0021 | 1 | 251 | 0.0040 | 210 | c.*35 others(219): Show |
SPATC1L | ENSG00000160284.15 | transcript | ENST00000291672.6 | protein_coding | 134 | chr21 | TogoVar | ||||||
SRXN1_chr20_641615_658200 | 642167 | G | GGGGGCCC others(203): Show |
downstream_gene_variant | MODIFIER | HG03491.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0044 | 1 | 422 | 0.0024 | 210 | c.*65 others(221): Show |
SRXN1 | ENSG00000271303.2 | transcript | ENST00000381962.4 | protein_coding | 4447 | chr20 | TogoVar |