Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	status	chr	external
ATRNL1_chr10_115088365_115953999	115605816	A A	AAAT AAAT	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02559.hp1 HG03041.hp1 HG02145.hp2 HG02559.hp1 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0002 a0001c0001t0013 a0001c0003t0003 a0001c0001t0002 a0001c0001t0013 a0001c0003t0003	a0001c0001t0002g0015 a0001c0001t0013g0019 a0001c0003t0003g0060 a0001c0001t0002g0015 a0001c0001t0013g0019 a0001c0003t0003g0060	3	128	0.0234	3	c.379 others(24): Show c.3795+56302_3795+56304dupAAT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115637603	C C	CTAT CTAT	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00738.hp1 HG00741.hp1 others(25): Show HG00735.hp1 HG00738.hp1 HG00741.hp1 HG01081.hp1 HG01258.hp1 HG01258.hp2 HG01361.hp1 HG01515.hp1 HG01943.hp1 HG01952.hp2 HG02015.hp2 HG02055.hp1 HG02300.hp2 HG02572.hp1 HG02896.hp1 HG02897.hp2 HG02970.hp1 HG03209.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03834.hp2 HG04115.hp2 NA18522.hp2 NA18906.hp1 NA18957.hp1 NA19003.hp2 NA20752.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(5): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006 a0001c0009 a0001c0011 a0002c0004	a0001c0001t0010 a0001c0001t0035 a0001c0001t0048 others(15): Show a0001c0001t0010 a0001c0001t0035 a0001c0001t0048 a0001c0002t0001 a0001c0002t0004 a0001c0002t0005 a0001c0002t0028 a0001c0003t0002 a0001c0003t0003 a0001c0003t0004 a0001c0003t0031 a0001c0003t0041 a0001c0003t0047 a0001c0005t0007 a0001c0006t0009 a0001c0009t0005 a0001c0011t0002 a0002c0004t0002	a0001c0001t0010g0033 a0001c0001t0010g0034 a0001c0001t0035g0118 others(25): Show a0001c0001t0010g0033 a0001c0001t0010g0034 a0001c0001t0035g0118 a0001c0001t0048g0107 a0001c0002t0001g0041 a0001c0002t0001g0045 a0001c0002t0001g0048 a0001c0002t0001g0052 a0001c0002t0004g0039 a0001c0002t0004g0040 a0001c0002t0004g0058 a0001c0002t0005g0037 a0001c0002t0005g0043 a0001c0002t0005g0053 a0001c0002t0005g0057 a0001c0002t0028g0076 a0001c0003t0002g0081 a0001c0003t0003g0049 a0001c0003t0004g0042 a0001c0003t0031g0016 a0001c0003t0041g0047 a0001c0003t0047g0128 a0001c0005t0007g0004 a0001c0005t0007g0009 a0001c0006t0009g0038 a0001c0009t0005g0059 a0001c0011t0002g0116 a0002c0004t0002g0013	28	128	0.2188	3	c.379 others(24): Show c.3795+88102_3795+88104dupATT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115638388	G G	GAGT GAGT	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02258.hp2 HG02559.hp2 others(6): Show HG01109.hp2 HG02258.hp2 HG02559.hp2 HG02630.hp2 HG02717.hp2 HG02976.hp2 HG03139.hp1 HG03209.hp1 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0010 a0001c0001t0019 a0001c0001t0024 others(6): Show a0001c0001t0010 a0001c0001t0019 a0001c0001t0024 a0001c0002t0006 a0001c0003t0001 a0001c0003t0014 a0001c0003t0039 a0001c0003t0045 a0001c0003t0047	a0001c0001t0010g0018 a0001c0001t0019g0020 a0001c0001t0024g0024 others(6): Show a0001c0001t0010g0018 a0001c0001t0019g0020 a0001c0001t0024g0024 a0001c0002t0006g0086 a0001c0003t0001g0083 a0001c0003t0014g0089 a0001c0003t0039g0126 a0001c0003t0045g0090 a0001c0003t0047g0128	9	128	0.0703	3	c.379 others(24): Show c.3795+88854_3795+88856dupGTA	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115646105	A A	AAGT AAGT	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG03471.hp2 HG02055.hp1 HG03471.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0033 a0001c0001t0010g0034 a0001c0001t0010g0033 a0001c0001t0010g0034	2	128	0.0156	3	c.379 others(24): Show c.3796-81142_3796-81140dupAGT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115682669	T T	TATG TATG	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01071.hp2 HG02015.hp2 others(6): Show HG00639.hp1 HG01071.hp2 HG02015.hp2 HG02055.hp1 HG02135.hp1 HG02723.hp1 HG03471.hp2 NA18522.hp2 NA18959.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0012 a0002c0008 a0002c0014	a0001c0001t0001 a0001c0001t0002 a0001c0001t0010 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0010 a0001c0002t0004 a0001c0003t0041 a0001c0012t0001 a0002c0008t0011 a0002c0014t0009	a0001c0001t0001g0068 a0001c0001t0002g0077 a0001c0001t0010g0033 others(6): Show a0001c0001t0001g0068 a0001c0001t0002g0077 a0001c0001t0010g0033 a0001c0001t0010g0034 a0001c0002t0004g0040 a0001c0003t0041g0047 a0001c0012t0001g0071 a0002c0008t0011g0073 a0002c0014t0009g0072	9	128	0.0703	3	c.379 others(24): Show c.3796-44549_3796-44547dupGAT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115683548	G G	GTTT GTTT	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00738.hp1 HG01081.hp1 others(6): Show HG00639.hp2 HG00738.hp1 HG01081.hp1 HG01361.hp1 HG02300.hp2 HG02896.hp1 HG02897.hp2 HG03195.hp1 NA19003.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005	a0001c0001t0014 a0001c0002t0001 a0001c0002t0004 others(4): Show a0001c0001t0014 a0001c0002t0001 a0001c0002t0004 a0001c0002t0005 a0001c0003t0004 a0001c0005t0007 a0001c0005t0032	a0001c0001t0014g0001 a0001c0002t0001g0041 a0001c0002t0004g0039 others(6): Show a0001c0001t0014g0001 a0001c0002t0001g0041 a0001c0002t0004g0039 a0001c0002t0004g0058 a0001c0002t0005g0057 a0001c0003t0004g0042 a0001c0005t0007g0004 a0001c0005t0007g0009 a0001c0005t0032g0005	9	128	0.0703	3	c.379 others(24): Show c.3796-43686_3796-43684dupTTT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115683553	T T	TTTG TTTG	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00738.hp2 HG01891.hp1 others(8): Show HG00735.hp2 HG00738.hp2 HG01891.hp1 HG02622.hp2 HG02896.hp2 HG02976.hp1 HG03195.hp2 HG03453.hp1 HG03579.hp1 NA18522.hp1 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0010 a0001c0001 a0001c0005 a0001c0010	a0001c0001t0002 a0001c0001t0011 a0001c0001t0019 others(6): Show a0001c0001t0002 a0001c0001t0011 a0001c0001t0019 a0001c0001t0020 a0001c0001t0036 a0001c0001t0042 a0001c0001t0043 a0001c0005t0018 a0001c0010t0006	a0001c0001t0002g0111 a0001c0001t0002g0113 a0001c0001t0002g0114 others(8): Show a0001c0001t0002g0111 a0001c0001t0002g0113 a0001c0001t0002g0114 a0001c0001t0011g0112 a0001c0001t0019g0020 a0001c0001t0020g0115 a0001c0001t0036g0117 a0001c0001t0042g0095 a0001c0001t0043g0094 a0001c0005t0018g0003 a0001c0010t0006g0087	11	128	0.0859	3	c.379 others(24): Show c.3796-43693_3796-43692insGTT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115713709	T T	TATC TATC	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01081.hp1 HG01891.hp1 others(10): Show HG00735.hp2 HG01081.hp1 HG01891.hp1 HG02300.hp2 HG02572.hp2 HG02723.hp1 HG02818.hp2 HG02896.hp2 HG02970.hp2 HG02976.hp1 HG03209.hp1 NA18522.hp2 NA18906.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0015 a0002c0008	a0001c0001t0002 a0001c0001t0003 a0001c0001t0019 others(9): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0019 a0001c0001t0042 a0001c0002t0004 a0001c0002t0006 a0001c0003t0004 a0001c0003t0041 a0001c0003t0047 a0001c0005t0018 a0001c0015t0034 a0002c0008t0011	a0001c0001t0002g0111 a0001c0001t0002g0114 a0001c0001t0003g0061 others(10): Show a0001c0001t0002g0111 a0001c0001t0002g0114 a0001c0001t0003g0061 a0001c0001t0019g0020 a0001c0001t0042g0095 a0001c0002t0004g0058 a0001c0002t0006g0062 a0001c0003t0004g0042 a0001c0003t0041g0047 a0001c0003t0047g0128 a0001c0005t0018g0003 a0001c0015t0034g0110 a0002c0008t0011g0073	13	128	0.1016	3	c.379 others(24): Show c.3796-13538_3796-13536dupATC	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115717548	C C	CTTT CTTT	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02559.hp1 HG03139.hp2 others(5): Show HG01891.hp2 HG02559.hp1 HG03139.hp2 HG03195.hp1 HG03453.hp1 HG03471.hp1 NA18522.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0010 a0001c0001 a0001c0005 a0001c0010	a0001c0001t0002 a0001c0001t0011 a0001c0001t0014 others(5): Show a0001c0001t0002 a0001c0001t0011 a0001c0001t0014 a0001c0001t0023 a0001c0001t0025 a0001c0001t0026 a0001c0005t0021 a0001c0010t0006	a0001c0001t0002g0015 a0001c0001t0011g0112 a0001c0001t0014g0001 others(5): Show a0001c0001t0002g0015 a0001c0001t0011g0112 a0001c0001t0014g0001 a0001c0001t0023g0022 a0001c0001t0025g0021 a0001c0001t0026g0010 a0001c0005t0021g0007 a0001c0010t0006g0087	8	128	0.0625	3	c.379 others(22): Show c.3796-9681_3796-9679dupTTT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115743238	T T	TAAA TAAA	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG02615.hp2 HG03209.hp1 others(2): Show HG01081.hp2 HG02615.hp2 HG03209.hp1 NA18994.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0003 a0001c0001t0015 a0001c0001t0016 others(2): Show a0001c0001t0003 a0001c0001t0015 a0001c0001t0016 a0001c0002t0004 a0001c0003t0047	a0001c0001t0003g0093 a0001c0001t0015g0064 a0001c0001t0016g0031 others(2): Show a0001c0001t0003g0093 a0001c0001t0015g0064 a0001c0001t0016g0031 a0001c0002t0004g0054 a0001c0003t0047g0128	5	128	0.0391	3	c.390 others(24): Show c.3903+15898_3903+15900dupAAA	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	27/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115867730	A A	ATTT ATTT	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01081.hp2 HG01515.hp2 others(15): Show HG00735.hp1 HG01081.hp2 HG01515.hp2 HG01943.hp1 HG01952.hp1 HG02055.hp2 HG02132.hp1 HG02135.hp2 HG02258.hp2 HG02300.hp1 HG02523.hp2 HG02622.hp1 HG03195.hp2 HG03239.hp1 HG03471.hp2 HG04115.hp1 NA18957.hp1 NA18959.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0001c0001t0010 a0001c0001t0022 a0001c0001t0029 a0001c0001t0043 a0001c0002t0001 a0001c0003t0002 a0001c0003t0003 a0001c0003t0045	a0001c0001t0001g0065 a0001c0001t0001g0120 a0001c0001t0001g0124 others(15): Show a0001c0001t0001g0065 a0001c0001t0001g0120 a0001c0001t0001g0124 a0001c0001t0002g0077 a0001c0001t0002g0080 a0001c0001t0002g0123 a0001c0001t0003g0092 a0001c0001t0003g0093 a0001c0001t0003g0104 a0001c0001t0008g0082 a0001c0001t0010g0033 a0001c0001t0022g0032 a0001c0001t0029g0075 a0001c0001t0043g0094 a0001c0002t0001g0045 a0001c0003t0002g0081 a0001c0003t0003g0049 a0001c0003t0045g0090	18	128	0.1406	3	c.401 others(24): Show c.4018+19754_4018+19756dupTTT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	28/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115907129	C C	CAGA CAGA	intron_variant intron_variant	MODIFIER	HG02015.hp2 NA18994.hp1 NA18995.hp1 others(3): Show HG02015.hp2 NA18994.hp1 NA18995.hp1 NA19003.hp2 NA19011.hp1 NA19070.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0039 a0001c0002t0004g0040 a0001c0002t0004g0054 others(3): Show a0001c0002t0004g0039 a0001c0002t0004g0040 a0001c0002t0004g0054 a0001c0002t0004g0056 a0001c0002t0004g0067 a0001c0002t0004g0127	6	128	0.0469	3	c.401 others(24): Show c.4019-37529_4019-37528insAGA	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	28/28		chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115917485	A A	AAAG AAAG	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00735.hp1 HG00735.hp2 others(71): Show HG00639.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01123.hp1 HG01123.hp2 HG01258.hp1 HG01258.hp2 HG01361.hp1 HG01361.hp2 HG01515.hp1 HG01515.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG02015.hp1 HG02015.hp2 HG02055.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02258.hp2 HG02300.hp1 HG02559.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp2 HG02723.hp1 HG02809.hp2 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02970.hp1 HG03139.hp1 HG03239.hp2 HG03453.hp1 HG03471.hp2 HG03579.hp2 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04115.hp2 HG06807.hp2 NA18522.hp2 NA18906.hp1 NA18957.hp1 NA18957.hp2 NA18959.hp2 NA18994.hp1 NA18995.hp1 NA18995.hp2 NA19003.hp1 NA19003.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19043.hp2 NA19070.hp1 NA19070.hp2 NA19240.hp1 NA19240.hp2 NA20752.hp1 NA20752.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(8): Show a0001c0001 a0001c0002 a0001c0003 a0001c0006 a0001c0009 a0001c0010 a0001c0012 a0001c0013 a0002c0004 a0002c0008 a0002c0014	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(33): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0015 a0001c0001t0016 a0001c0001t0024 a0001c0001t0029 a0001c0001t0035 a0001c0001t0046 a0001c0002t0001 a0001c0002t0004 a0001c0002t0005 a0001c0002t0006 a0001c0002t0028 a0001c0003t0002 a0001c0003t0003 a0001c0003t0004 a0001c0003t0015 a0001c0003t0031 a0001c0003t0038 a0001c0003t0041 a0001c0003t0045 a0001c0006t0009 a0001c0006t0033 a0001c0009t0005 a0001c0010t0006 a0001c0012t0001 a0001c0013t0009 a0002c0004t0006 a0002c0004t0012 a0002c0008t0011 a0002c0014t0009	a0001c0001t0001g0036 a0001c0001t0001g0055 a0001c0001t0001g0065 others(71): Show a0001c0001t0001g0036 a0001c0001t0001g0055 a0001c0001t0001g0065 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0091 a0001c0001t0001g0096 a0001c0001t0001g0098 a0001c0001t0001g0101 a0001c0001t0001g0105 a0001c0001t0001g0125 a0001c0001t0002g0077 a0001c0001t0002g0080 a0001c0001t0002g0113 a0001c0001t0002g0114 a0001c0001t0002g0123 a0001c0001t0003g0061 a0001c0001t0003g0066 a0001c0001t0003g0074 a0001c0001t0003g0092 a0001c0001t0003g0093 a0001c0001t0003g0104 a0001c0001t0008g0079 a0001c0001t0008g0082 a0001c0001t0009g0122 a0001c0001t0010g0018 a0001c0001t0010g0033 a0001c0001t0011g0119 a0001c0001t0015g0064 a0001c0001t0016g0031 a0001c0001t0024g0024 a0001c0001t0029g0075 a0001c0001t0035g0118 a0001c0001t0046g0099 a0001c0002t0001g0041 a0001c0002t0001g0045 a0001c0002t0001g0048 a0001c0002t0001g0050 a0001c0002t0001g0051 a0001c0002t0001g0052 a0001c0002t0004g0039 a0001c0002t0004g0040 a0001c0002t0004g0054 a0001c0002t0004g0056 a0001c0002t0004g0067 a0001c0002t0004g0127 a0001c0002t0005g0037 a0001c0002t0005g0043 a0001c0002t0005g0044 a0001c0002t0005g0046 a0001c0002t0005g0053 a0001c0002t0005g0057 a0001c0002t0006g0086 a0001c0002t0028g0076 a0001c0003t0002g0081 a0001c0003t0003g0049 a0001c0003t0004g0042 a0001c0003t0015g0108 a0001c0003t0031g0016 a0001c0003t0038g0106 a0001c0003t0041g0047 a0001c0003t0045g0090 a0001c0006t0009g0038 a0001c0006t0033g0035 a0001c0009t0005g0059 a0001c0010t0006g0087 a0001c0012t0001g0071 a0001c0013t0009g0078 a0002c0004t0006g0084 a0002c0004t0012g0025 a0002c0004t0012g0026 a0002c0008t0011g0073 a0002c0014t0009g0072	74	128	0.5781	3	c.401 others(24): Show c.4019-27173_4019-27172insAAG	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	28/28		chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115932139	A A	AAAG AAAG	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG03453.hp1 NA18906.hp2 HG02976.hp1 HG03453.hp1 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0010 a0001c0001 a0001c0005 a0001c0010	a0001c0001t0019 a0001c0005t0018 a0001c0010t0006 a0001c0001t0019 a0001c0005t0018 a0001c0010t0006	a0001c0001t0019g0020 a0001c0005t0018g0003 a0001c0010t0006g0087 a0001c0001t0019g0020 a0001c0005t0018g0003 a0001c0010t0006g0087	3	128	0.0234	3	c.401 others(24): Show c.4019-12518_4019-12516dupAAG	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	28/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRN_chr20_3466018_3656118	3481660	A A	ATTC ATTC	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00639.hp1 HG00733.hp2 others(54): Show HG00140.hp2 HG00639.hp1 HG00733.hp2 HG00735.hp1 HG00738.hp1 HG01074.hp1 HG01081.hp1 HG01106.hp1 HG01106.hp2 HG01123.hp2 HG01175.hp1 HG01243.hp2 HG01261.hp2 HG01358.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01943.hp1 HG02055.hp1 HG02109.hp2 HG02145.hp2 HG02451.hp2 HG02486.hp2 HG02559.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp2 HG02647.hp2 HG02717.hp2 HG02886.hp1 HG02895.hp1 HG02897.hp2 HG02965.hp1 HG02970.hp2 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03471.hp1 HG03579.hp1 HG03579.hp2 HG03942.hp2 HG04199.hp1 NA18522.hp1 NA18952.hp2 NA18985.hp1 NA19075.hp1 NA19081.hp1 NA20805.hp2	a0001 a0002 a0003 others(6): Show a0001 a0002 a0003 a0005 a0009 a0010 a0011 a0015 a0017	a0001c0003 a0001c0005 a0001c0006 others(13): Show a0001c0003 a0001c0005 a0001c0006 a0001c0007 a0002c0004 a0002c0012 a0003c0008 a0003c0017 a0003c0018 a0005c0009 a0009c0019 a0009c0020 a0010c0023 a0011c0022 a0015c0021 a0017c0032	a0001c0003t0002 a0001c0003t0005 a0001c0003t0007 others(28): Show a0001c0003t0002 a0001c0003t0005 a0001c0003t0007 a0001c0003t0010 a0001c0003t0031 a0001c0003t0035 a0001c0003t0037 a0001c0005t0007 a0001c0005t0038 a0001c0006t0003 a0001c0006t0004 a0001c0006t0020 a0001c0007t0003 a0001c0007t0006 a0002c0004t0004 a0002c0004t0011 a0002c0004t0016 a0002c0012t0012 a0002c0012t0013 a0002c0012t0019 a0003c0008t0005 a0003c0008t0029 a0003c0017t0021 a0003c0018t0007 a0005c0009t0004 a0009c0019t0004 a0009c0020t0014 a0010c0023t0007 a0011c0022t0004 a0015c0021t0034 a0017c0032t0001	a0001c0003t0002g0214 a0001c0003t0002g0215 a0001c0003t0002g0216 others(54): Show a0001c0003t0002g0214 a0001c0003t0002g0215 a0001c0003t0002g0216 a0001c0003t0002g0217 a0001c0003t0005g0178 a0001c0003t0005g0190 a0001c0003t0007g0179 a0001c0003t0007g0187 a0001c0003t0007g0188 a0001c0003t0010g0206 a0001c0003t0031g0218 a0001c0003t0035g0205 a0001c0003t0037g0194 a0001c0005t0007g0181 a0001c0005t0007g0183 a0001c0005t0007g0184 a0001c0005t0007g0191 a0001c0005t0007g0192 a0001c0005t0007g0213 a0001c0005t0038g0189 a0001c0006t0003g0211 a0001c0006t0003g0212 a0001c0006t0004g0177 a0001c0006t0004g0186 a0001c0006t0020g0180 a0001c0007t0003g0185 a0001c0007t0003g0193 a0001c0007t0006g0201 a0001c0007t0006g0202 a0001c0007t0006g0203 a0002c0004t0004g0153 a0002c0004t0004g0154 a0002c0004t0004g0159 a0002c0004t0004g0160 a0002c0004t0004g0162 a0002c0004t0011g0150 a0002c0004t0011g0151 a0002c0004t0011g0152 a0002c0004t0016g0155 a0002c0004t0016g0156 a0002c0012t0012g0158 a0002c0012t0013g0161 a0002c0012t0019g0157 a0003c0008t0005g0197 a0003c0008t0005g0198 a0003c0008t0029g0196 a0003c0017t0021g0199 a0003c0018t0007g0200 a0005c0009t0004g0006 a0005c0009t0004g0007 a0005c0009t0004g0008 a0009c0019t0004g0210 a0009c0020t0014g0209 a0010c0023t0007g0182 a0011c0022t0004g0009 a0015c0021t0034g0204 a0017c0032t0001g0195	57	220	0.2591	3	c.410 others(22): Show c.410+10145_410+10146insCTT	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	1/28	INFO_REALIGN_3_PRIME	chr20	TogoVar
ATRN_chr20_3466018_3656118	3484766	G G	GTGA GTGA	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02109.hp2 HG02451.hp2 others(14): Show HG01884.hp2 HG02109.hp2 HG02451.hp2 HG02559.hp1 HG02615.hp2 HG02622.hp1 HG02717.hp2 HG02965.hp1 HG02970.hp2 HG03098.hp2 HG03139.hp1 HG03225.hp1 HG03471.hp1 HG03579.hp1 HG03942.hp2 HG04199.hp1 NA18522.hp1	a0002 a0005 a0011 a0002 a0005 a0011	a0002c0004 a0002c0012 a0005c0009 others(1): Show a0002c0004 a0002c0012 a0005c0009 a0011c0022	a0002c0004t0004 a0002c0004t0011 a0002c0004t0016 others(5): Show a0002c0004t0004 a0002c0004t0011 a0002c0004t0016 a0002c0012t0012 a0002c0012t0013 a0002c0012t0019 a0005c0009t0004 a0011c0022t0004	a0002c0004t0004g0153 a0002c0004t0004g0154 a0002c0004t0004g0159 others(14): Show a0002c0004t0004g0153 a0002c0004t0004g0154 a0002c0004t0004g0159 a0002c0004t0004g0160 a0002c0004t0004g0162 a0002c0004t0011g0150 a0002c0004t0011g0151 a0002c0004t0011g0152 a0002c0004t0016g0155 a0002c0004t0016g0156 a0002c0012t0012g0158 a0002c0012t0013g0161 a0002c0012t0019g0157 a0005c0009t0004g0006 a0005c0009t0004g0007 a0005c0009t0004g0008 a0011c0022t0004g0009	17	220	0.0773	3	c.410 others(22): Show c.410+13250_410+13251insGAT	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	1/28	INFO_REALIGN_3_PRIME	chr20	TogoVar
ATRN_chr20_3466018_3656118	3484766	G G	GTTA GTTA	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00639.hp1 HG00733.hp2 others(55): Show HG00140.hp2 HG00639.hp1 HG00733.hp2 HG00735.hp1 HG00738.hp1 HG01074.hp1 HG01081.hp1 HG01106.hp1 HG01106.hp2 HG01123.hp2 HG01175.hp1 HG01243.hp2 HG01261.hp2 HG01358.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01884.hp1 HG01891.hp1 HG01943.hp1 HG02015.hp2 HG02055.hp1 HG02055.hp2 HG02145.hp2 HG02257.hp2 HG02300.hp2 HG02486.hp1 HG02486.hp2 HG02572.hp2 HG02602.hp1 HG02615.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02809.hp2 HG02886.hp1 HG02895.hp1 HG02897.hp2 HG02976.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03195.hp1 HG03209.hp2 HG03225.hp2 HG03453.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp2 HG03704.hp1 NA18952.hp2 NA18985.hp1 NA19043.hp2 NA19064.hp1 NA19075.hp1 NA19081.hp1 NA20805.hp2	a0001 a0003 a0004 others(4): Show a0001 a0003 a0004 a0009 a0010 a0015 a0017	a0001c0001 a0001c0002 a0001c0003 others(15): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006 a0001c0007 a0001c0013 a0001c0014 a0003c0008 a0003c0017 a0003c0018 a0004c0011 a0004c0016 a0009c0019 a0009c0020 a0010c0023 a0015c0021 a0017c0032	a0001c0001t0001 a0001c0001t0005 a0001c0001t0010 others(35): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0010 a0001c0001t0015 a0001c0002t0003 a0001c0002t0006 a0001c0003t0002 a0001c0003t0005 a0001c0003t0007 a0001c0003t0010 a0001c0003t0031 a0001c0003t0035 a0001c0003t0037 a0001c0005t0007 a0001c0005t0038 a0001c0006t0003 a0001c0006t0004 a0001c0006t0020 a0001c0007t0003 a0001c0007t0006 a0001c0013t0008 a0001c0013t0017 a0001c0013t0026 a0001c0014t0002 a0001c0014t0015 a0003c0008t0005 a0003c0008t0029 a0003c0017t0021 a0003c0018t0007 a0004c0011t0004 a0004c0011t0008 a0004c0016t0013 a0004c0016t0015 a0009c0019t0004 a0009c0020t0014 a0010c0023t0007 a0015c0021t0034 a0017c0032t0001	a0001c0001t0001g0163 a0001c0001t0001g0172 a0001c0001t0005g0175 others(55): Show a0001c0001t0001g0163 a0001c0001t0001g0172 a0001c0001t0005g0175 a0001c0001t0010g0025 a0001c0001t0015g0005 a0001c0002t0003g0176 a0001c0002t0006g0164 a0001c0003t0002g0214 a0001c0003t0002g0215 a0001c0003t0002g0216 a0001c0003t0002g0217 a0001c0003t0005g0178 a0001c0003t0005g0190 a0001c0003t0007g0179 a0001c0003t0007g0187 a0001c0003t0007g0188 a0001c0003t0010g0206 a0001c0003t0031g0218 a0001c0003t0035g0205 a0001c0003t0037g0194 a0001c0005t0007g0181 a0001c0005t0007g0183 a0001c0005t0007g0184 a0001c0005t0007g0191 a0001c0005t0007g0192 a0001c0005t0007g0213 a0001c0005t0038g0189 a0001c0006t0003g0211 a0001c0006t0003g0212 a0001c0006t0004g0177 a0001c0006t0004g0186 a0001c0006t0020g0180 a0001c0007t0003g0185 a0001c0007t0003g0193 a0001c0007t0006g0201 a0001c0007t0006g0202 a0001c0007t0006g0203 a0001c0013t0008g0171 a0001c0013t0017g0149 a0001c0013t0026g0169 a0001c0014t0002g0170 a0001c0014t0002g0174 a0001c0014t0015g0001 a0003c0008t0005g0197 a0003c0008t0005g0198 a0003c0008t0029g0196 a0003c0017t0021g0199 a0003c0018t0007g0200 a0004c0011t0004g0165 a0004c0011t0008g0168 a0004c0011t0008g0173 a0004c0016t0013g0167 a0004c0016t0015g0166 a0009c0019t0004g0210 a0009c0020t0014g0209 a0010c0023t0007g0182 a0015c0021t0034g0204 a0017c0032t0001g0195	58	220	0.2636	3	c.410 others(22): Show c.410+13251_410+13252insATT	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	1/28	INFO_REALIGN_3_PRIME	chr20	TogoVar
ATRN_chr20_3466018_3656118	3484909	A A	AATT AATT	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00673.hp1 HG01257.hp2 others(17): Show HG00438.hp2 HG00673.hp1 HG01257.hp2 HG01358.hp1 HG02055.hp1 HG02165.hp1 HG02300.hp2 HG02602.hp1 HG02622.hp2 HG02809.hp1 HG02895.hp2 HG03516.hp1 HG03704.hp1 HG03710.hp1 HG03710.hp2 NA18952.hp1 NA18955.hp1 NA18985.hp2 NA18994.hp1 NA19064.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0006 a0001c0001 a0001c0002 a0001c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0009 a0001c0001t0012 a0001c0002t0003 a0001c0002t0004 a0001c0006t0004	a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0043 others(17): Show a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0048 a0001c0001t0001g0125 a0001c0001t0001g0140 a0001c0001t0001g0172 a0001c0001t0002g0012 a0001c0001t0005g0175 a0001c0001t0009g0046 a0001c0001t0009g0047 a0001c0001t0009g0101 a0001c0001t0012g0133 a0001c0002t0003g0045 a0001c0002t0003g0176 a0001c0002t0004g0030 a0001c0002t0004g0091 a0001c0002t0004g0092 a0001c0006t0004g0177	20	220	0.0909	3	c.410 others(22): Show c.410+13429_410+13431dupATT	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	1/28	INFO_REALIGN_3_PRIME	chr20	TogoVar
ATRN_chr20_3466018_3656118	3504688	G G	GATA GATA	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG01081.hp2 HG01257.hp1 others(3): Show HG00438.hp1 HG01081.hp2 HG01257.hp1 HG01952.hp2 HG03130.hp2 HG04228.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0005 a0001c0001t0009 others(3): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0009 a0001c0001t0010 a0001c0002t0003 a0001c0002t0025	a0001c0001t0002g0116 a0001c0001t0005g0015 a0001c0001t0009g0103 others(3): Show a0001c0001t0002g0116 a0001c0001t0005g0015 a0001c0001t0009g0103 a0001c0001t0010g0145 a0001c0002t0003g0037 a0001c0002t0025g0090	6	220	0.0273	3	c.411 others(22): Show c.411-30516_411-30514dupATA	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	1/28	INFO_REALIGN_3_PRIME	chr20	TogoVar
ATRN_chr20_3466018_3656118	3512108	T T	TATA TATA	intron_variant intron_variant	MODIFIER	HG01123.hp2 HG02258.hp2 HG02559.hp2 others(3): Show HG01123.hp2 HG02258.hp2 HG02559.hp2 NA18522.hp2 NA18955.hp1 NA18955.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0002t0008 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0008 a0001c0002t0017 a0001c0003t0007	a0001c0001t0001g0123 a0001c0001t0002g0012 a0001c0002t0008g0081 others(3): Show a0001c0001t0001g0123 a0001c0001t0002g0012 a0001c0002t0008g0081 a0001c0002t0008g0142 a0001c0002t0017g0079 a0001c0003t0007g0188	6	220	0.0273	3	c.411 others(22): Show c.411-23145_411-23144insATA	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	1/28		chr20	TogoVar
ATRN_chr20_3466018_3656118	3545364	C C	CAAA CAAA	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01074.hp1 HG01106.hp1 others(2): Show HG00639.hp1 HG01074.hp1 HG01106.hp1 HG01358.hp2 HG01433.hp1	a0003 a0003	a0003c0008 a0003c0017 a0003c0018 a0003c0008 a0003c0017 a0003c0018	a0003c0008t0005 a0003c0008t0029 a0003c0017t0021 others(1): Show a0003c0008t0005 a0003c0008t0029 a0003c0017t0021 a0003c0018t0007	a0003c0008t0005g0197 a0003c0008t0005g0198 a0003c0008t0029g0196 others(2): Show a0003c0008t0005g0197 a0003c0008t0005g0198 a0003c0008t0029g0196 a0003c0017t0021g0199 a0003c0018t0007g0200	5	220	0.0227	3	c.609 others(18): Show c.609-383_609-381dupAAA	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	3/28	INFO_REALIGN_3_PRIME	chr20	TogoVar
ATRN_chr20_3466018_3656118	3566904	C C	CAAA CAAA	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG00673.hp2 HG01175.hp2 others(5): Show HG00621.hp1 HG00673.hp2 HG01175.hp2 HG01981.hp2 HG02055.hp2 HG02698.hp2 HG03041.hp1 HG03490.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0014 a0001c0001 a0001c0002 a0001c0014	a0001c0001t0001 a0001c0001t0002 a0001c0001t0012 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0012 a0001c0002t0003 a0001c0014t0002	a0001c0001t0001g0062 a0001c0001t0001g0070 a0001c0001t0001g0141 others(5): Show a0001c0001t0001g0062 a0001c0001t0001g0070 a0001c0001t0001g0141 a0001c0001t0002g0110 a0001c0001t0002g0112 a0001c0001t0012g0115 a0001c0002t0003g0147 a0001c0014t0002g0170	8	220	0.0364	3	c.187 others(22): Show c.1871+1490_1871+1492dupAAA	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	11/28	INFO_REALIGN_3_PRIME	chr20	TogoVar
ATRN_chr20_3466018_3656118	3588981	G G	GTTT GTTT	intron_variant intron_variant	MODIFIER	HG01943.hp2 HG02257.hp2 HG02486.hp1 others(10): Show HG01943.hp2 HG02257.hp2 HG02486.hp1 HG02572.hp2 HG02647.hp1 HG02809.hp2 HG02897.hp1 HG02922.hp1 HG02976.hp2 HG03139.hp2 NA18522.hp2 NA19043.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0013 others(1): Show a0001c0001 a0001c0002 a0001c0013 a0001c0014	a0001c0001t0010 a0001c0001t0015 a0001c0002t0003 others(7): Show a0001c0001t0010 a0001c0001t0015 a0001c0002t0003 a0001c0002t0004 a0001c0002t0006 a0001c0002t0008 a0001c0013t0008 a0001c0013t0026 a0001c0014t0002 a0001c0014t0015	a0001c0001t0010g0025 a0001c0001t0015g0005 a0001c0002t0003g0146 others(10): Show a0001c0001t0010g0025 a0001c0001t0015g0005 a0001c0002t0003g0146 a0001c0002t0004g0097 a0001c0002t0006g0018 a0001c0002t0008g0130 a0001c0002t0008g0131 a0001c0002t0008g0132 a0001c0002t0008g0142 a0001c0013t0008g0171 a0001c0013t0026g0169 a0001c0014t0002g0174 a0001c0014t0015g0001	13	220	0.0591	3	c.318 others(22): Show c.3185-2171_3185-2169dupTTT	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	18/28	INFO_REALIGN_3_PRIME	chr20	TogoVar
ATRN_chr20_3466018_3656118	3588989	T T	TTTG TTTG	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02630.hp1 HG02976.hp1 others(2): Show HG02615.hp1 HG02630.hp1 HG02976.hp1 HG03209.hp2 HG03540.hp2	a0004 a0004	a0004c0011 a0004c0016 a0004c0011 a0004c0016	a0004c0011t0004 a0004c0011t0008 a0004c0016t0013 others(1): Show a0004c0011t0004 a0004c0011t0008 a0004c0016t0013 a0004c0016t0015	a0004c0011t0004g0165 a0004c0011t0008g0168 a0004c0011t0008g0173 others(2): Show a0004c0011t0004g0165 a0004c0011t0008g0168 a0004c0011t0008g0173 a0004c0016t0013g0167 a0004c0016t0015g0166	5	220	0.0227	3	c.318 others(22): Show c.3185-2178_3185-2177insGTT	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	18/28	INFO_REALIGN_3_PRIME	chr20	TogoVar
ATRN_chr20_3466018_3656118	3602963	C C	CAAA CAAA	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02145.hp1 HG02257.hp2 others(3): Show HG02109.hp1 HG02145.hp1 HG02257.hp2 HG02486.hp1 HG02602.hp1 HG02809.hp2	a0001 a0001	a0001c0001 a0001c0013 a0001c0014 a0001c0001 a0001c0013 a0001c0014	a0001c0001t0005 a0001c0001t0012 a0001c0001t0013 others(3): Show a0001c0001t0005 a0001c0001t0012 a0001c0001t0013 a0001c0013t0008 a0001c0014t0002 a0001c0014t0015	a0001c0001t0005g0175 a0001c0001t0012g0208 a0001c0001t0013g0136 others(3): Show a0001c0001t0005g0175 a0001c0001t0012g0208 a0001c0001t0013g0136 a0001c0013t0008g0171 a0001c0014t0002g0174 a0001c0014t0015g0001	6	220	0.0273	3	c.364 others(22): Show c.3644-1112_3644-1110dupAAA	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	23/28	INFO_REALIGN_3_PRIME	chr20	TogoVar
ATRN_chr20_3466018_3656118	3608979	G G	GAAA GAAA	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01074.hp1 HG01106.hp1 others(2): Show HG00639.hp1 HG01074.hp1 HG01106.hp1 HG01358.hp2 HG01433.hp1	a0003 a0003	a0003c0008 a0003c0017 a0003c0018 a0003c0008 a0003c0017 a0003c0018	a0003c0008t0005 a0003c0008t0029 a0003c0017t0021 others(1): Show a0003c0008t0005 a0003c0008t0029 a0003c0017t0021 a0003c0018t0007	a0003c0008t0005g0197 a0003c0008t0005g0198 a0003c0008t0029g0196 others(2): Show a0003c0008t0005g0197 a0003c0008t0005g0198 a0003c0008t0029g0196 a0003c0017t0021g0199 a0003c0018t0007g0200	5	220	0.0227	3	c.380 others(22): Show c.3801+4728_3801+4730dupAAA	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	24/28	INFO_REALIGN_3_PRIME	chr20	TogoVar
ATRN_chr20_3466018_3656118	3610567	A A	ATTT ATTT	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01074.hp1 HG01106.hp1 others(3): Show HG00639.hp1 HG01074.hp1 HG01106.hp1 HG01358.hp2 HG01433.hp1 HG03130.hp1	a0003 a0015 a0003 a0015	a0003c0008 a0003c0017 a0003c0018 others(1): Show a0003c0008 a0003c0017 a0003c0018 a0015c0021	a0003c0008t0005 a0003c0008t0029 a0003c0017t0021 others(2): Show a0003c0008t0005 a0003c0008t0029 a0003c0017t0021 a0003c0018t0007 a0015c0021t0034	a0003c0008t0005g0197 a0003c0008t0005g0198 a0003c0008t0029g0196 others(3): Show a0003c0008t0005g0197 a0003c0008t0005g0198 a0003c0008t0029g0196 a0003c0017t0021g0199 a0003c0018t0007g0200 a0015c0021t0034g0204	6	220	0.0273	3	c.380 others(22): Show c.3801+6326_3801+6328dupTTT	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	24/28	INFO_REALIGN_3_PRIME	chr20	TogoVar
ATRN_chr20_3466018_3656118	3610742	C C	CTTT CTTT	intron_variant intron_variant	MODIFIER	HG01071.hp2 HG01884.hp2 HG01891.hp2 others(12): Show HG01071.hp2 HG01884.hp2 HG01891.hp2 HG02109.hp2 HG02451.hp2 HG02559.hp1 HG02615.hp2 HG02622.hp1 HG02897.hp1 HG02965.hp1 HG03130.hp1 HG03139.hp1 HG03225.hp1 HG03579.hp1 NA18522.hp1	a0001 a0002 a0005 others(1): Show a0001 a0002 a0005 a0015	a0001c0001 a0001c0002 a0002c0004 others(3): Show a0001c0001 a0001c0002 a0002c0004 a0002c0012 a0005c0009 a0015c0021	a0001c0001t0005 a0001c0001t0033 a0001c0002t0004 others(6): Show a0001c0001t0005 a0001c0001t0033 a0001c0002t0004 a0002c0004t0004 a0002c0004t0011 a0002c0012t0012 a0002c0012t0013 a0005c0009t0004 a0015c0021t0034	a0001c0001t0005g0080 a0001c0001t0033g0094 a0001c0002t0004g0097 others(12): Show a0001c0001t0005g0080 a0001c0001t0033g0094 a0001c0002t0004g0097 a0002c0004t0004g0153 a0002c0004t0004g0154 a0002c0004t0004g0159 a0002c0004t0004g0160 a0002c0004t0004g0162 a0002c0004t0011g0151 a0002c0004t0011g0152 a0002c0012t0012g0158 a0002c0012t0013g0161 a0005c0009t0004g0006 a0005c0009t0004g0008 a0015c0021t0034g0204	15	220	0.0682	3	c.380 others(22): Show c.3801+6503_3801+6505dupTTT	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	24/28	INFO_REALIGN_3_PRIME	chr20	TogoVar
ATRN_chr20_3466018_3656118	3618842	G G	GGTT GGTT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00323.hp1 HG00738.hp2 others(106): Show HG00099.hp1 HG00323.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01081.hp2 HG01099.hp1 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01169.hp2 HG01175.hp1 HG01243.hp1 HG01257.hp1 HG01261.hp2 HG01358.hp2 HG01361.hp2 HG01433.hp2 HG01496.hp1 HG01515.hp2 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01943.hp2 HG01952.hp1 HG01981.hp1 HG01981.hp2 HG02055.hp1 HG02109.hp2 HG02257.hp2 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02647.hp2 HG02717.hp1 HG02717.hp2 HG02809.hp1 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03942.hp2 HG04115.hp1 HG04199.hp1 HG04199.hp2 NA18522.hp1 NA18522.hp2 NA18952.hp2 NA18953.hp2 NA18966.hp1 NA18985.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19064.hp1 NA19075.hp2 NA19081.hp1 NA19240.hp1 NA19240.hp2 NA20805.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(8): Show a0001 a0002 a0003 a0004 a0005 a0007 a0008 a0009 a0011 a0013 a0015	a0001c0001 a0001c0002 a0001c0003 others(18): Show a0001c0001 a0001c0002 a0001c0003 a0001c0006 a0001c0007 a0001c0013 a0001c0014 a0002c0004 a0002c0012 a0003c0017 a0004c0011 a0004c0016 a0005c0009 a0007c0015 a0007c0027 a0008c0030 a0009c0019 a0009c0020 a0011c0022 a0013c0024 a0015c0021	a0001c0001t0010 a0001c0001t0012 a0001c0001t0014 others(44): Show a0001c0001t0010 a0001c0001t0012 a0001c0001t0014 a0001c0001t0015 a0001c0001t0019 a0001c0001t0023 a0001c0001t0033 a0001c0002t0003 a0001c0002t0004 a0001c0002t0006 a0001c0002t0008 a0001c0002t0017 a0001c0002t0020 a0001c0002t0021 a0001c0002t0022 a0001c0002t0025 a0001c0003t0010 a0001c0003t0031 a0001c0003t0035 a0001c0006t0003 a0001c0006t0004 a0001c0006t0020 a0001c0007t0003 a0001c0007t0006 a0001c0013t0008 a0001c0013t0017 a0001c0013t0026 a0001c0014t0015 a0002c0004t0004 a0002c0004t0011 a0002c0004t0016 a0002c0012t0012 a0002c0012t0019 a0003c0017t0021 a0004c0011t0004 a0004c0011t0008 a0004c0016t0015 a0005c0009t0004 a0007c0015t0004 a0007c0015t0024 a0007c0027t0014 a0008c0030t0011 a0009c0019t0004 a0009c0020t0014 a0011c0022t0004 a0013c0024t0003 a0015c0021t0034	a0001c0001t0010g0011 a0001c0001t0010g0025 a0001c0001t0010g0096 others(106): Show a0001c0001t0010g0011 a0001c0001t0010g0025 a0001c0001t0010g0096 a0001c0001t0010g0145 a0001c0001t0012g0115 a0001c0001t0012g0133 a0001c0001t0014g0010 a0001c0001t0015g0005 a0001c0001t0019g0129 a0001c0001t0023g0087 a0001c0001t0033g0094 a0001c0002t0003g0023 a0001c0002t0003g0028 a0001c0002t0003g0034 a0001c0002t0003g0037 a0001c0002t0003g0038 a0001c0002t0003g0045 a0001c0002t0003g0058 a0001c0002t0003g0063 a0001c0002t0003g0075 a0001c0002t0003g0076 a0001c0002t0003g0078 a0001c0002t0003g0083 a0001c0002t0003g0084 a0001c0002t0003g0085 a0001c0002t0003g0088 a0001c0002t0003g0089 a0001c0002t0003g0135 a0001c0002t0003g0146 a0001c0002t0003g0147 a0001c0002t0003g0176 a0001c0002t0003g0219 a0001c0002t0003g0220 a0001c0002t0004g0030 a0001c0002t0004g0055 a0001c0002t0004g0091 a0001c0002t0004g0092 a0001c0002t0004g0097 a0001c0002t0004g0124 a0001c0002t0004g0134 a0001c0002t0006g0018 a0001c0002t0006g0049 a0001c0002t0006g0050 a0001c0002t0006g0051 a0001c0002t0006g0052 a0001c0002t0006g0053 a0001c0002t0006g0067 a0001c0002t0006g0069 a0001c0002t0006g0073 a0001c0002t0006g0099 a0001c0002t0006g0164 a0001c0002t0008g0035 a0001c0002t0008g0081 a0001c0002t0008g0082 a0001c0002t0008g0130 a0001c0002t0008g0131 a0001c0002t0008g0132 a0001c0002t0008g0142 a0001c0002t0017g0079 a0001c0002t0020g0098 a0001c0002t0021g0004 a0001c0002t0022g0024 a0001c0002t0025g0090 a0001c0003t0010g0206 a0001c0003t0031g0218 a0001c0003t0035g0205 a0001c0006t0003g0211 a0001c0006t0003g0212 a0001c0006t0004g0177 a0001c0006t0004g0186 a0001c0006t0020g0180 a0001c0007t0003g0185 a0001c0007t0003g0193 a0001c0007t0006g0201 a0001c0007t0006g0202 a0001c0007t0006g0203 a0001c0013t0008g0171 a0001c0013t0017g0149 a0001c0013t0026g0169 a0001c0014t0015g0001 a0002c0004t0004g0153 a0002c0004t0004g0154 a0002c0004t0004g0159 a0002c0004t0004g0160 a0002c0004t0004g0162 a0002c0004t0011g0150 a0002c0004t0011g0151 a0002c0004t0011g0152 a0002c0004t0016g0155 a0002c0004t0016g0156 a0002c0012t0012g0158 a0002c0012t0019g0157 a0003c0017t0021g0199 a0004c0011t0004g0165 a0004c0011t0008g0168 a0004c0011t0008g0173 a0004c0016t0015g0166 a0005c0009t0004g0006 a0005c0009t0004g0007 a0005c0009t0004g0008 a0007c0015t0004g0026 a0007c0015t0024g0137 a0007c0027t0014g0029 a0008c0030t0011g0093 a0009c0019t0004g0210 a0009c0020t0014g0209 a0011c0022t0004g0009 a0013c0024t0003g0054 a0015c0021t0034g0204	109	220	0.4955	3	c.380 others(22): Show c.3802-5668_3802-5666dupGTT	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	24/28	INFO_REALIGN_3_PRIME	chr20	TogoVar
ATRN_chr20_3466018_3656118	3626781	C C	CTTT CTTT	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02572.hp2 HG03041.hp1 others(5): Show HG02559.hp1 HG02572.hp2 HG03041.hp1 HG03130.hp1 HG03516.hp1 NA18952.hp2 NA18985.hp1 NA19081.hp1	a0001 a0002 a0015 a0001 a0002 a0015	a0001c0001 a0001c0007 a0001c0013 others(2): Show a0001c0001 a0001c0007 a0001c0013 a0002c0012 a0015c0021	a0001c0001t0012 a0001c0007t0006 a0001c0013t0026 others(2): Show a0001c0001t0012 a0001c0007t0006 a0001c0013t0026 a0002c0012t0012 a0015c0021t0034	a0001c0001t0012g0115 a0001c0001t0012g0133 a0001c0007t0006g0201 others(5): Show a0001c0001t0012g0115 a0001c0001t0012g0133 a0001c0007t0006g0201 a0001c0007t0006g0202 a0001c0007t0006g0203 a0001c0013t0026g0169 a0002c0012t0012g0158 a0015c0021t0034g0204	8	220	0.0364	3	c.386 others(22): Show c.3863+2226_3863+2228dupTTT	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	25/28	INFO_REALIGN_3_PRIME	chr20	TogoVar
ATRN_chr20_3466018_3656118	3641590	C C	CAAA CAAA	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00738.hp2 HG00741.hp1 others(38): Show HG00099.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01099.hp1 HG01123.hp1 HG01169.hp2 HG01175.hp1 HG01257.hp1 HG01261.hp2 HG01358.hp2 HG01496.hp1 HG01515.hp2 HG01943.hp2 HG02257.hp2 HG02258.hp2 HG02622.hp1 HG02895.hp2 HG02922.hp1 HG02976.hp2 HG03139.hp2 HG03195.hp2 HG03209.hp2 HG03471.hp2 HG03490.hp2 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18952.hp2 NA18953.hp2 NA18966.hp1 NA18985.hp1 NA19043.hp1 NA19240.hp1 NA19240.hp2 NA20805.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0007 a0013	a0001c0001 a0001c0002 a0001c0007 others(6): Show a0001c0001 a0001c0002 a0001c0007 a0001c0014 a0002c0004 a0003c0017 a0004c0011 a0007c0015 a0013c0024	a0001c0001t0023 a0001c0002t0003 a0001c0002t0004 others(13): Show a0001c0001t0023 a0001c0002t0003 a0001c0002t0004 a0001c0002t0006 a0001c0002t0008 a0001c0002t0021 a0001c0002t0025 a0001c0002t0032 a0001c0007t0003 a0001c0007t0006 a0001c0014t0015 a0002c0004t0011 a0003c0017t0021 a0004c0011t0008 a0007c0015t0024 a0013c0024t0003	a0001c0001t0023g0087 a0001c0002t0003g0038 a0001c0002t0003g0045 others(38): Show a0001c0001t0023g0087 a0001c0002t0003g0038 a0001c0002t0003g0045 a0001c0002t0003g0063 a0001c0002t0003g0075 a0001c0002t0003g0076 a0001c0002t0003g0078 a0001c0002t0003g0083 a0001c0002t0003g0084 a0001c0002t0003g0085 a0001c0002t0003g0088 a0001c0002t0003g0146 a0001c0002t0003g0176 a0001c0002t0003g0220 a0001c0002t0004g0030 a0001c0002t0006g0018 a0001c0002t0006g0053 a0001c0002t0006g0069 a0001c0002t0006g0073 a0001c0002t0008g0035 a0001c0002t0008g0081 a0001c0002t0008g0082 a0001c0002t0008g0130 a0001c0002t0008g0131 a0001c0002t0008g0132 a0001c0002t0008g0142 a0001c0002t0021g0004 a0001c0002t0025g0090 a0001c0002t0032g0033 a0001c0007t0003g0185 a0001c0007t0003g0193 a0001c0007t0006g0201 a0001c0007t0006g0203 a0001c0014t0015g0001 a0002c0004t0011g0151 a0002c0004t0011g0152 a0003c0017t0021g0199 a0004c0011t0008g0168 a0004c0011t0008g0173 a0007c0015t0024g0137 a0013c0024t0003g0054	41	220	0.1864	3	c.405 others(22): Show c.4051-2541_4051-2539dupAAA	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	27/28	INFO_REALIGN_3_PRIME	chr20	TogoVar
ATRX_chrX_77499880_77791216	77509911	C C	CGGG CGGG	intron_variant intron_variant	MODIFIER	HG03239.hp2 NA18952.hp1 NA19240.hp2 others(1): Show HG03239.hp2 NA18952.hp1 NA19240.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0008 others(1): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0008 a0001c0001t0011	a0001c0001t0002g0092 a0001c0001t0005g0135 a0001c0001t0008g0005 others(1): Show a0001c0001t0002g0092 a0001c0001t0005g0135 a0001c0001t0008g0005 a0001c0001t0011g0001	4	218	0.0184	3	c.720 others(22): Show c.7201-1285_7201-1283dupCCC	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	34/34		chrX	TogoVar
ATRX_chrX_77499880_77791216	77538230	A A	ACAC ACAC	intron_variant intron_variant	MODIFIER	NA18964.hp1 NA18964.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0143 a0001c0001t0002g0143	1	218	0.0046	3	c.670 others(24): Show c.6700-14830_6700-14829insGTG	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	30/34		chrX	TogoVar
ATRX_chrX_77499880_77791216	77583299	G G	GGAA GGAA	intron_variant intron_variant	MODIFIER	NA19063.hp1 NA19063.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0107 a0001c0001t0002g0107	1	218	0.0046	3	c.621 others(22): Show c.6217+6534_6217+6535insTTC	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	27/34		chrX	TogoVar
ATRX_chrX_77499880_77791216	77634232	T T	TAAA TAAA	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG00323.hp1 others(90): Show HG00140.hp1 HG00280.hp1 HG00323.hp1 HG00597.hp2 HG00642.hp1 HG01081.hp1 HG01109.hp1 HG01167.hp1 HG01192.hp1 HG01256.hp1 HG01257.hp1 HG01261.hp1 HG01358.hp1 HG01496.hp1 HG01517.hp2 HG01928.hp1 HG01934.hp1 HG01975.hp1 HG01975.hp2 HG02055.hp1 HG02074.hp1 HG02083.hp1 HG02132.hp1 HG02145.hp1 HG02165.hp1 HG02257.hp1 HG02258.hp1 HG02273.hp2 HG02280.hp2 HG02451.hp2 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02647.hp1 HG02683.hp2 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02922.hp1 HG02965.hp1 HG02970.hp2 HG03017.hp1 HG03195.hp1 HG03195.hp2 HG03239.hp2 HG03453.hp2 HG03486.hp1 HG03490.hp1 HG03492.hp1 HG03540.hp2 HG03579.hp1 HG03688.hp1 HG03831.hp2 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04199.hp1 HG04228.hp1 NA18955.hp1 NA18959.hp1 NA18962.hp1 NA18964.hp2 NA18965.hp1 NA18967.hp1 NA18969.hp1 NA18970.hp1 NA18973.hp1 NA18977.hp1 NA18982.hp1 NA18984.hp1 NA18986.hp1 NA18988.hp1 NA18990.hp1 NA18992.hp1 NA19001.hp1 NA19001.hp2 NA19043.hp1 NA19056.hp1 NA19058.hp1 NA19060.hp1 NA19070.hp1 NA19074.hp1 NA19074.hp2 NA19080.hp2 NA19088.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0005 a0006	a0001c0001 a0001c0005 a0002c0002 others(4): Show a0001c0001 a0001c0005 a0002c0002 a0002c0004 a0003c0006 a0005c0009 a0006c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(19): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0011 a0001c0001t0017 a0001c0001t0018 a0001c0001t0021 a0001c0005t0005 a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 a0002c0002t0006 a0002c0002t0015 a0002c0004t0001 a0002c0004t0003 a0003c0006t0001 a0005c0009t0010 a0006c0008t0003	a0001c0001t0001g0087 a0001c0001t0001g0195 a0001c0001t0001g0198 others(90): Show a0001c0001t0001g0087 a0001c0001t0001g0195 a0001c0001t0001g0198 a0001c0001t0002g0158 a0001c0001t0002g0184 a0001c0001t0002g0199 a0001c0001t0003g0084 a0001c0001t0003g0085 a0001c0001t0003g0088 a0001c0001t0003g0115 a0001c0001t0003g0137 a0001c0001t0003g0138 a0001c0001t0003g0162 a0001c0001t0003g0164 a0001c0001t0003g0200 a0001c0001t0003g0201 a0001c0001t0003g0202 a0001c0001t0004g0122 a0001c0001t0004g0185 a0001c0001t0004g0187 a0001c0001t0004g0190 a0001c0001t0004g0192 a0001c0001t0004g0205 a0001c0001t0005g0073 a0001c0001t0005g0074 a0001c0001t0005g0135 a0001c0001t0005g0213 a0001c0001t0006g0179 a0001c0001t0008g0005 a0001c0001t0011g0001 a0001c0001t0017g0183 a0001c0001t0018g0193 a0001c0001t0021g0078 a0001c0005t0005g0076 a0001c0005t0005g0081 a0002c0002t0001g0010 a0002c0002t0001g0011 a0002c0002t0001g0013 a0002c0002t0001g0014 a0002c0002t0001g0016 a0002c0002t0001g0018 a0002c0002t0001g0024 a0002c0002t0001g0026 a0002c0002t0001g0028 a0002c0002t0001g0033 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0001g0040 a0002c0002t0001g0041 a0002c0002t0001g0042 a0002c0002t0001g0044 a0002c0002t0001g0045 a0002c0002t0001g0049 a0002c0002t0001g0050 a0002c0002t0001g0054 a0002c0002t0001g0058 a0002c0002t0001g0059 a0002c0002t0001g0060 a0002c0002t0001g0061 a0002c0002t0001g0062 a0002c0002t0001g0063 a0002c0002t0001g0097 a0002c0002t0001g0109 a0002c0002t0001g0114 a0002c0002t0001g0117 a0002c0002t0001g0141 a0002c0002t0001g0204 a0002c0002t0002g0007 a0002c0002t0002g0012 a0002c0002t0002g0020 a0002c0002t0002g0032 a0002c0002t0002g0037 a0002c0002t0002g0048 a0002c0002t0002g0057 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0110 a0002c0002t0002g0208 a0002c0002t0003g0025 a0002c0002t0003g0027 a0002c0002t0003g0177 a0002c0002t0006g0207 a0002c0002t0015g0043 a0002c0004t0001g0009 a0002c0004t0001g0023 a0002c0004t0001g0031 a0002c0004t0001g0055 a0002c0004t0003g0030 a0003c0006t0001g0015 a0003c0006t0001g0159 a0005c0009t0010g0086 a0006c0008t0003g0203	93	218	0.4266	3	c.480 others(20): Show c.4809+359_4809+361dupTTT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	17/34		chrX	TogoVar
ATRX_chrX_77499880_77791216	77636896	A A	AAAG AAAG	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02717.hp1 HG02809.hp1 others(3): Show HG02257.hp2 HG02717.hp1 HG02809.hp1 HG03540.hp2 NA18906.hp1 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0010 a0001c0001 a0001c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0010t0006	a0001c0001t0001g0160 a0001c0001t0001g0195 a0001c0001t0002g0158 others(3): Show a0001c0001t0001g0160 a0001c0001t0001g0195 a0001c0001t0002g0158 a0001c0001t0002g0178 a0001c0001t0003g0196 a0001c0010t0006g0197	6	218	0.0275	3	c.455 others(20): Show c.4558-843_4558-841dupCTT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	15/34		chrX	TogoVar
ATRX_chrX_77499880_77791216	77651217	C C	CAAA CAAA	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00597.hp2 HG01070.hp2 others(28): Show HG00280.hp1 HG00597.hp2 HG01070.hp2 HG01081.hp1 HG01109.hp1 HG01934.hp1 HG01952.hp1 HG01975.hp1 HG02027.hp1 HG02071.hp1 HG02083.hp1 HG02145.hp1 HG02683.hp2 HG02738.hp1 HG02965.hp1 HG03453.hp2 HG03490.hp1 HG03492.hp1 HG03831.hp2 HG03927.hp2 HG04115.hp1 HG04199.hp1 NA18960.hp1 NA18967.hp1 NA18973.hp2 NA18984.hp1 NA18989.hp1 NA18990.hp1 NA19003.hp2 NA19074.hp2 NA21309.hp2	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0002c0002 a0002c0004 others(1): Show a0001c0001 a0002c0002 a0002c0004 a0005c0009	a0001c0001t0002 a0001c0001t0003 a0001c0001t0021 others(8): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0021 a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 a0002c0002t0006 a0002c0002t0013 a0002c0004t0001 a0002c0004t0003 a0005c0009t0010	a0001c0001t0002g0118 a0001c0001t0002g0119 a0001c0001t0002g0120 others(28): Show a0001c0001t0002g0118 a0001c0001t0002g0119 a0001c0001t0002g0120 a0001c0001t0002g0130 a0001c0001t0002g0182 a0001c0001t0003g0085 a0001c0001t0021g0078 a0002c0002t0001g0014 a0002c0002t0001g0024 a0002c0002t0001g0026 a0002c0002t0001g0028 a0002c0002t0001g0033 a0002c0002t0001g0036 a0002c0002t0001g0041 a0002c0002t0001g0050 a0002c0002t0001g0062 a0002c0002t0001g0097 a0002c0002t0001g0109 a0002c0002t0001g0117 a0002c0002t0001g0204 a0002c0002t0002g0052 a0002c0002t0002g0053 a0002c0002t0002g0206 a0002c0002t0002g0208 a0002c0002t0002g0210 a0002c0002t0003g0025 a0002c0002t0006g0207 a0002c0002t0013g0008 a0002c0004t0001g0055 a0002c0004t0003g0030 a0005c0009t0010g0086	31	218	0.1422	3	c.455 others(20): Show c.4557+894_4557+896dupTTT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	15/34		chrX	TogoVar
ATRX_chrX_77499880_77791216	77671147	C C	CAAA CAAA	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01243.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0077 a0001c0001t0008g0077	1	218	0.0046	3	c.380 others(22): Show c.3809+5076_3809+5078dupTTT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	10/34		chrX	TogoVar
ATRX_chrX_77499880_77791216	77671161	A A	ATAT ATAT	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0066 a0001c0001t0007g0066	1	218	0.0046	3	c.380 others(22): Show c.3809+5064_3809+5065insATA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	10/34		chrX	TogoVar
ATRX_chrX_77499880_77791216	77671167	A A	AAAT AAAT	intron_variant intron_variant	MODIFIER	HG03471.hp1 NA18962.hp1 HG03471.hp1 NA18962.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0007 a0001c0001t0004 a0001c0001t0007	a0001c0001t0004g0190 a0001c0001t0007g0067 a0001c0001t0004g0190 a0001c0001t0007g0067	2	218	0.0092	3	c.380 others(22): Show c.3809+5058_3809+5059insATT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	10/34		chrX	TogoVar
ATRX_chrX_77499880_77791216	77671167	A A	ATAT ATAT	intron_variant intron_variant	MODIFIER	HG02040.hp1 HG02280.hp1 NA18947.hp1 others(1): Show HG02040.hp1 HG02280.hp1 NA18947.hp1 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0010 a0001c0001t0002 a0001c0001t0010	a0001c0001t0002g0144 a0001c0001t0002g0156 a0001c0001t0002g0211 others(1): Show a0001c0001t0002g0144 a0001c0001t0002g0156 a0001c0001t0002g0211 a0001c0001t0010g0083	4	218	0.0184	3	c.380 others(22): Show c.3809+5058_3809+5059insATA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	10/34		chrX	TogoVar
ATRX_chrX_77499880_77791216	77692892	T T	TGTG TGTG	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0136 a0001c0003t0001g0136	1	218	0.0046	3	c.484 others(18): Show c.484+931_484+932insCAC	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	6/34		chrX	TogoVar
ATRX_chrX_77499880_77791216	77702444	A A	AAAT AAAT	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG01975.hp2 HG02015.hp1 others(12): Show HG00558.hp1 HG01975.hp2 HG02015.hp1 HG02165.hp1 HG04204.hp1 NA18948.hp1 NA18962.hp1 NA18965.hp1 NA18970.hp1 NA18973.hp1 NA19001.hp2 NA19007.hp1 NA19074.hp1 NA19080.hp2 NA19084.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0017 others(1): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0017 a0001c0001t0018	a0001c0001t0002g0142 a0001c0001t0002g0184 a0001c0001t0004g0122 others(12): Show a0001c0001t0002g0142 a0001c0001t0002g0184 a0001c0001t0004g0122 a0001c0001t0004g0185 a0001c0001t0004g0186 a0001c0001t0004g0187 a0001c0001t0004g0188 a0001c0001t0004g0190 a0001c0001t0004g0191 a0001c0001t0004g0192 a0001c0001t0004g0194 a0001c0001t0004g0205 a0001c0001t0004g0218 a0001c0001t0017g0183 a0001c0001t0018g0193	15	218	0.0688	3	c.134 others(20): Show c.134-3818_134-3816dupATT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	2/34		chrX	TogoVar
ATRX_chrX_77499880_77791216	77716110	A A	ATTT ATTT	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG02165.hp1 HG02165.hp2 others(10): Show HG01070.hp1 HG02165.hp1 HG02165.hp2 HG02273.hp1 HG02970.hp1 HG03453.hp1 HG03831.hp1 HG04184.hp1 NA18612.hp1 NA18945.hp1 NA18969.hp2 NA18983.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0009 a0001c0003t0001	a0001c0001t0001g0102 a0001c0001t0001g0108 a0001c0001t0001g0121 others(10): Show a0001c0001t0001g0102 a0001c0001t0001g0108 a0001c0001t0001g0121 a0001c0001t0001g0157 a0001c0001t0002g0072 a0001c0001t0002g0127 a0001c0001t0002g0128 a0001c0001t0002g0182 a0001c0001t0002g0216 a0001c0001t0004g0192 a0001c0001t0009g0004 a0001c0003t0001g0095 a0001c0003t0001g0151	13	218	0.0596	3	c.133 others(20): Show c.133+1018_133+1020dupAAA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	2/34		chrX	TogoVar
ATRX_chrX_77499880_77791216	77716301	T T	TAAA TAAA	intron_variant intron_variant	MODIFIER	HG01257.hp2 HG01257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0132 a0001c0001t0001g0132	1	218	0.0046	3	c.133 others(18): Show c.133+827_133+829dupTTT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	2/34		chrX	TogoVar
ATRX_chrX_77499880_77791216	77716319	A A	ATAT ATAT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG02083.hp1 NA19056.hp1 others(2): Show HG00280.hp1 HG02083.hp1 NA19056.hp1 NA19088.hp1 homoSapiens_chm13v2.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0002 a0002c0002t0001 a0002c0002t0002	a0002c0002t0001g0018 a0002c0002t0001g0061 a0002c0002t0001g0062 others(2): Show a0002c0002t0001g0018 a0002c0002t0001g0061 a0002c0002t0001g0062 a0002c0002t0001g0117 a0002c0002t0002g0065	5	218	0.0229	3	c.133 others(18): Show c.133+811_133+812insATA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	2/34		chrX	TogoVar
ATRX_chrX_77499880_77791216	77716321	A A	ATAT ATAT	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00597.hp2 HG01081.hp1 others(25): Show HG00140.hp1 HG00597.hp2 HG01081.hp1 HG01106.hp1 HG01256.hp1 HG01496.hp1 HG01928.hp1 HG01934.hp1 HG01975.hp1 HG02027.hp1 HG02071.hp1 HG02132.hp1 HG02735.hp1 HG03492.hp1 HG03688.hp1 HG03927.hp2 HG04115.hp1 NA18947.hp2 NA18959.hp1 NA18961.hp1 NA18967.hp1 NA18992.hp1 NA18995.hp1 NA19000.hp1 NA19011.hp1 NA19083.hp1 NA20805.hp1 NA20905.hp1	a0002 a0002	a0002c0002 a0002c0004 a0002c0002 a0002c0004	a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 others(3): Show a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 a0002c0002t0015 a0002c0004t0001 a0002c0004t0003	a0002c0002t0001g0011 a0002c0002t0001g0013 a0002c0002t0001g0014 others(25): Show a0002c0002t0001g0011 a0002c0002t0001g0013 a0002c0002t0001g0014 a0002c0002t0001g0017 a0002c0002t0001g0024 a0002c0002t0001g0029 a0002c0002t0001g0033 a0002c0002t0001g0034 a0002c0002t0001g0039 a0002c0002t0001g0040 a0002c0002t0001g0041 a0002c0002t0001g0042 a0002c0002t0001g0097 a0002c0002t0001g0140 a0002c0002t0001g0209 a0002c0002t0002g0032 a0002c0002t0002g0051 a0002c0002t0002g0052 a0002c0002t0002g0206 a0002c0002t0002g0208 a0002c0002t0003g0019 a0002c0002t0003g0021 a0002c0002t0015g0043 a0002c0004t0001g0009 a0002c0004t0001g0023 a0002c0004t0001g0031 a0002c0004t0001g0055 a0002c0004t0003g0030	28	218	0.1284	3	c.133 others(18): Show c.133+809_133+810insATA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	2/34		chrX	TogoVar
ATRX_chrX_77499880_77791216	77716323	A A	AAAT AAAT	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG03195.hp2 HG03486.hp1 others(1): Show HG01109.hp1 HG03195.hp2 HG03486.hp1 NA19043.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0005c0009 a0001c0001 a0005c0009	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0005c0009t0010	a0001c0001t0001g0198 a0001c0001t0002g0199 a0001c0001t0003g0200 others(1): Show a0001c0001t0001g0198 a0001c0001t0002g0199 a0001c0001t0003g0200 a0005c0009t0010g0086	4	218	0.0184	3	c.133 others(18): Show c.133+807_133+808insATT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	2/34		chrX	TogoVar
ATRX_chrX_77499880_77791216	77716323	A A	ATAT ATAT	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01516.hp2 HG01517.hp2 others(5): Show HG01070.hp2 HG01516.hp2 HG01517.hp2 HG02015.hp1 HG02145.hp1 HG02280.hp1 HG03942.hp1 NA20752.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0004 a0001c0001t0010 a0002c0002t0001 others(5): Show a0001c0001t0004 a0001c0001t0010 a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 a0002c0002t0006 a0002c0002t0013 a0002c0002t0016	a0001c0001t0004g0188 a0001c0001t0010g0083 a0002c0002t0001g0045 others(5): Show a0001c0001t0004g0188 a0001c0001t0010g0083 a0002c0002t0001g0045 a0002c0002t0002g0048 a0002c0002t0003g0177 a0002c0002t0006g0207 a0002c0002t0013g0008 a0002c0002t0016g0046	8	218	0.0367	3	c.133 others(18): Show c.133+807_133+808insATA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	2/34		chrX	TogoVar
ATRX_chrX_77499880_77791216	77735834	A A	AAAT AAAT	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG01167.hp1 HG02015.hp1 others(14): Show HG00558.hp1 HG01167.hp1 HG02015.hp1 HG02165.hp1 HG02451.hp2 HG04204.hp1 NA18948.hp1 NA18962.hp1 NA18965.hp1 NA18970.hp1 NA18973.hp1 NA19001.hp2 NA19007.hp1 NA19074.hp1 NA19080.hp1 NA19084.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(2): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0017 a0001c0001t0018	a0001c0001t0002g0142 a0001c0001t0002g0184 a0001c0001t0002g0189 others(14): Show a0001c0001t0002g0142 a0001c0001t0002g0184 a0001c0001t0002g0189 a0001c0001t0003g0115 a0001c0001t0003g0137 a0001c0001t0003g0138 a0001c0001t0004g0185 a0001c0001t0004g0186 a0001c0001t0004g0188 a0001c0001t0004g0190 a0001c0001t0004g0191 a0001c0001t0004g0192 a0001c0001t0004g0194 a0001c0001t0004g0205 a0001c0001t0004g0218 a0001c0001t0017g0183 a0001c0001t0018g0193	17	218	0.0780	3	c.21- others(20): Show c.21-18592_21-18591insATT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	1/34		chrX	TogoVar

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