Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
PTPN18_chr2_130351056_130380405	130361532	T T	TTCTTTCT others(23): Show TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0021 a0002c0002t0021	a0002c0002t0021g0188 a0002c0002t0021g0188	1	378	0.0026	30	c.414 others(47): Show c.414+1888_414+1917dupCTTTCTTTCTTTCTTTCTTTCTTTCTTT CT	PTPN18	ENSG00000072135.13	transcript	ENST00000175756.10	protein_coding	5/14		INFO_REALIGN_3_PRIME	chr2	TogoVar
PTPN18_chr2_130351056_130380405	130361536	T T	TTCTTTCT others(23): Show TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0016 a0002c0002t0016	a0002c0002t0016g0189 a0002c0002t0016g0189	1	376	0.0027	30	c.414 others(47): Show c.414+1891_414+1920dupTCTTTCTTTCTTTCTTTCTTTCTTTCTT TC	PTPN18	ENSG00000072135.13	transcript	ENST00000175756.10	protein_coding	5/14		INFO_REALIGN_3_PRIME	chr2	TogoVar
PTPN1_chr20_50505383_50590241	50524569	C C	CTTTTTTT others(23): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02895.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0197 a0001c0002t0001g0197	1	108	0.0093	30	c.63+ others(47): Show c.63+14004_63+14005insTTTTTTTTTTTTTTTTTTTTTTTTTTTT TT	PTPN1	ENSG00000196396.10	transcript	ENST00000371621.5	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr20	TogoVar
PTPN2_chr18_12787152_12889237	12807586	A A	AAAAAAAA others(23): Show AAAAAAAAAAAAAAAAAAAAAATATATATAT	intron_variant intron_variant	MODIFIER	HG04228.hp1 HG04228.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0155 a0001c0001t0004g0155	1	58	0.0172	30	c.859 others(47): Show c.859-5436_859-5435insATATATATATTTTTTTTTTTTTTTTTTT TT	PTPN2	ENSG00000175354.20	transcript	ENST00000309660.10	protein_coding	7/8			chr18	TogoVar
PTPN2_chr18_12787152_12889237	12876296	A A	AAAGAAGA others(23): Show AAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG03017.hp1 HG03486.hp1 others(6): Show HG02723.hp1 HG03017.hp1 HG03486.hp1 HG03540.hp2 HG03669.hp1 HG03942.hp2 NA18906.hp1 NA20300.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0001 a0001c0001t0002 a0001c0001t0005	a0001c0001t0001g0006 a0001c0001t0001g0172 a0001c0001t0001g0206 others(6): Show a0001c0001t0001g0006 a0001c0001t0001g0172 a0001c0001t0001g0206 a0001c0001t0001g0229 a0001c0001t0002g0005 a0001c0001t0002g0031 a0001c0001t0002g0032 a0001c0001t0002g0081 a0001c0001t0005g0079	9	78	0.1154	30	c.69+ others(45): Show c.69+7776_69+7777insCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	PTPN2	ENSG00000175354.20	transcript	ENST00000309660.10	protein_coding	1/8			chr18	TogoVar
PTPN3_chr9_109370700_109503307	109408794	A A	ATATATAT others(23): Show ATATATATATATATATATATATATGGGCTTT	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0122 a0001c0001t0001g0122	1	190	0.0053	30	c.157 others(47): Show c.1579-418_1579-417insAAAGCCCATATATATATATATATATATA TA	PTPN3	ENSG00000070159.14	transcript	ENST00000374541.4	protein_coding	16/25			chr9	TogoVar
PTPN4_chr2_119754922_119989899	119845253	G G	GGAGGGAG others(23): Show GGAGGGAGAGGGAGAGGGAGAGGGAGAGGGA	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02698.hp2 HG02738.hp2 others(1): Show HG02630.hp2 HG02698.hp2 HG02738.hp2 NA19007.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0014 a0001c0001t0025 a0001c0001t0002 a0001c0001t0014 a0001c0001t0025	a0001c0001t0002g0184 a0001c0001t0002g0239 a0001c0001t0014g0238 others(1): Show a0001c0001t0002g0184 a0001c0001t0002g0239 a0001c0001t0014g0238 a0001c0001t0025g0199	4	170	0.0235	30	c.139 others(49): Show c.139-17278_139-17277insAGAGGGAGAGGGAGAGGGAGAGGGAG AGGG	PTPN4	ENSG00000088179.9	transcript	ENST00000263708.7	protein_coding	2/26		INFO_REALIGN_3_PRIME	chr2	TogoVar
PTPN5_chr11_18722928_18796798	18746162	A A	AATATATA others(23): Show AATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0026 a0001c0001t0001g0026	1	229	0.0044	30	c.98- others(45): Show c.98-1993_98-1964dupATATATATATATATATATATATATATATAT	PTPN5	ENSG00000110786.18	transcript	ENST00000358540.7	protein_coding	3/14			chr11	TogoVar
PTPN9_chr15_75458251_75584315	75530555	T T	TTATATAT others(23): Show TTATATATTATTATATTATAATATACTATAA	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01928.hp1 HG02965.hp1 others(2): Show HG01884.hp2 HG01928.hp1 HG02965.hp1 NA19030.hp2 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0007 a0001c0001t0008 a0001c0001t0002 a0001c0001t0007 a0001c0001t0008	a0001c0001t0002g0237 a0001c0001t0002g0290 a0001c0001t0007g0177 others(2): Show a0001c0001t0002g0237 a0001c0001t0002g0290 a0001c0001t0007g0177 a0001c0001t0008g0214 a0001c0001t0008g0216	5	151	0.0331	30	c.64- others(45): Show c.64-3324_64-3295dupTTATAGTATATTATAATATAATAATATATA	PTPN9	ENSG00000169410.11	transcript	ENST00000618819.5	protein_coding	1/12			chr15	TogoVar
PTPN9_chr15_75458251_75584315	75530713	A A	ATATAATA others(23): Show ATATAATATACTATTATATATATTATTATAT	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG00735.hp2 HG01978.hp2 others(23): Show HG00733.hp1 HG00735.hp2 HG01978.hp2 HG01981.hp2 HG01993.hp2 HG02074.hp1 HG02148.hp2 HG02257.hp2 HG02273.hp1 HG02630.hp1 HG02683.hp1 HG02965.hp2 NA18939.hp2 NA18944.hp1 NA18945.hp1 NA18946.hp2 NA18960.hp2 NA18970.hp2 NA18974.hp2 NA18980.hp1 NA18981.hp1 NA18994.hp2 NA19012.hp2 NA19030.hp2 NA19077.hp2 NA19081.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0034 others(1): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0034 a0001c0001t0049	a0001c0001t0002g0190 a0001c0001t0002g0191 a0001c0001t0002g0290 others(23): Show a0001c0001t0002g0190 a0001c0001t0002g0191 a0001c0001t0002g0290 a0001c0001t0004g0064 a0001c0001t0004g0124 a0001c0001t0004g0125 a0001c0001t0004g0126 a0001c0001t0004g0127 a0001c0001t0004g0128 a0001c0001t0004g0129 a0001c0001t0004g0130 a0001c0001t0004g0131 a0001c0001t0004g0132 a0001c0001t0004g0133 a0001c0001t0004g0134 a0001c0001t0004g0135 a0001c0001t0004g0136 a0001c0001t0004g0137 a0001c0001t0004g0138 a0001c0001t0004g0139 a0001c0001t0004g0140 a0001c0001t0004g0141 a0001c0001t0004g0142 a0001c0001t0004g0144 a0001c0001t0034g0192 a0001c0001t0049g0326	26	175	0.1486	30	c.64- others(45): Show c.64-3453_64-3452insATATAATAATATATATAATAGTATATTATA	PTPN9	ENSG00000169410.11	transcript	ENST00000618819.5	protein_coding	1/12			chr15	TogoVar
PTPN9_chr15_75458251_75584315	75530714	T T	TATAATAT others(23): Show TATAATATACTATTATATATATTATTATATA	intron_variant intron_variant	MODIFIER	HG01952.hp1 HG01952.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0143 a0001c0001t0004g0143	1	324	0.0031	30	c.64- others(45): Show c.64-3454_64-3453insTATATAATAATATATATAATAGTATATTAT	PTPN9	ENSG00000169410.11	transcript	ENST00000618819.5	protein_coding	1/12			chr15	TogoVar
PTPN9_chr15_75458251_75584315	75537753	C C	CAAAAAAA others(23): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA19009.hp1 NA19009.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0112 a0001c0001t0001g0112	1	89	0.0112	30	c.64- others(47): Show c.64-10493_64-10492insTTTTTTTTTTTTTTTTTTTTTTTTTTTT TT	PTPN9	ENSG00000169410.11	transcript	ENST00000618819.5	protein_coding	1/12			chr15	TogoVar
PTPRA_chr20_2868481_3043669	2910317	A A	ATATATAT others(23): Show ATATATATTTTATATAATATATTTTGTATAT	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0001 a0001c0007t0001	a0001c0007t0001g0146 a0001c0007t0001g0146	1	351	0.0028	30	c.-12 others(51): Show c.-128-12875_-128-12874insATATATTTTGTATATTATATATTT TATATA	PTPRA	ENSG00000132670.21	transcript	ENST00000399903.7	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr20	TogoVar
PTPRD_chr9_8309246_10618002	9947367	A A	ATATATTA others(23): Show ATATATTATATATAATATATATAATATATAT	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0017 a0001c0017	a0001c0017t0002 a0001c0017t0002	a0001c0017t0002g0005 a0001c0017t0002g0005	1	34	0.0294	30	c.-47 others(49): Show c.-471-8758_-471-8757insATATATATTATATATATTATATATAA TATA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	4/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	10031647	T T	TATATATA others(23): Show TATATATATATATATATACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01243.hp1 NA21309.hp1 HG01109.hp1 HG01243.hp1 NA21309.hp1	a0001 a0001	a0001c0002 a0001c0004 a0001c0014 a0001c0002 a0001c0004 a0001c0014	a0001c0002t0015 a0001c0004t0003 a0001c0014t0025 a0001c0002t0015 a0001c0004t0003 a0001c0014t0025	a0001c0002t0015g0010 a0001c0004t0003g0001 a0001c0014t0025g0033 a0001c0002t0015g0010 a0001c0004t0003g0001 a0001c0014t0025g0033	3	14	0.2143	30	c.-47 others(49): Show c.-472+2070_-472+2071insGTGTGTGTGTGTGTATATATATATAT ATAT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	4/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	10323202	T T	TCCCTCCC others(23): Show TCCCTCCCCTCCCCTCCCCTTCCCTTCTCTC	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0025 a0001c0002t0005g0025	1	33	0.0303	30	c.-54 others(51): Show c.-545+17731_-545+17760dupGAGAGAAGGGAAGGGGAGGGGAGG GGAGGG	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	3/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	10323264	C C	CCTCCCCT others(23): Show CCTCCCCTCCCCTCCCCTCCCCTTCCCTTCT	intron_variant intron_variant	MODIFIER	HG01981.hp1 HG01981.hp1	a0003 a0003	a0003c0008 a0003c0008	a0003c0008t0008 a0003c0008t0008	a0003c0008t0008g0003 a0003c0008t0008g0003	1	34	0.0294	30	c.-54 others(51): Show c.-545+17698_-545+17699insAGAAGGGAAGGGGAGGGGAGGGGA GGGGAG	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	3/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	10509557	T T	TTATATAT others(23): Show TTATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00642.hp1	a0001 a0001	a0001c0013 a0001c0013	a0001c0013t0012 a0001c0013t0012	a0001c0013t0012g0014 a0001c0013t0012g0014	1	3	0.3333	30	c.-60 others(53): Show c.-600+102840_-600+102841insTATATATATATATATATATATA TATATATA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	2/45			chr9	TogoVar
PTPRE_chr10_127902103_128090855	128010545	C C	CCTTTTCT others(23): Show CCTTTTCTTTTCTTTTCTTTTCTTTTCTTTT	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG01891.hp1 HG03041.hp1 others(1): Show HG00609.hp2 HG01891.hp1 HG03041.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0005 a0001c0001t0015 others(1): Show a0001c0001t0003 a0001c0001t0005 a0001c0001t0015 a0001c0001t0036	a0001c0001t0003g0064 a0001c0001t0005g0243 a0001c0001t0015g0135 others(1): Show a0001c0001t0003g0064 a0001c0001t0005g0243 a0001c0001t0015g0135 a0001c0001t0036g0024	4	55	0.0727	30	c.-8+ others(47): Show c.-8+28269_-8+28298dupTCTTTTCTTTTCTTTTCTTTTCTTTTCT TT	PTPRE	ENSG00000132334.17	transcript	ENST00000254667.8	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr10	TogoVar
PTPRE_chr10_127902103_128090855	128010590	T T	TCTTTTCT others(23): Show TCTTTTCTTTTCTTTTCTTTTCTTTTCTTTC	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0038 a0001c0001t0038	a0001c0001t0038g0042 a0001c0001t0038g0042	1	301	0.0033	30	c.-8+ others(47): Show c.-8+28298_-8+28299insTCTTTTCTTTTCTTTTCTTTTCTTTCCT TT	PTPRE	ENSG00000132334.17	transcript	ENST00000254667.8	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr10	TogoVar
PTPRE_chr10_127902103_128090855	128067189	T T	TGTGCACA others(23): Show TGTGCACACACATACACCCACACACATTCAC	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00738.hp1 HG03017.hp2 HG00642.hp1 HG00738.hp1 HG03017.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0013 a0001c0001t0010 a0001c0001t0013	a0001c0001t0010g0088 a0001c0001t0013g0046 a0001c0001t0013g0276 a0001c0001t0010g0088 a0001c0001t0013g0046 a0001c0001t0013g0276	3	302	0.0099	30	c.844 others(45): Show c.844-933_844-904dupGTGCACACACATACACCCACACACATTCAC	PTPRE	ENSG00000132334.17	transcript	ENST00000254667.8	protein_coding	11/20		INFO_REALIGN_3_PRIME	chr10	TogoVar
PTPRG_chr3_61556571_62302609	61621033	G G	GTGTATAT others(23): Show GTGTATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0091 a0001c0001t0002g0091	1	83	0.0120	30	c.85+ others(47): Show c.85+58662_85+58663insGTATATATATATATATATATATATATAT AT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	1/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61621051	A A	ATATATAT others(23): Show ATATATATATATATATATATATATGTGTGTG	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0067 a0002c0003t0001g0067	1	34	0.0294	30	c.85+ others(47): Show c.85+58680_85+58681insATATATATATATATATATATATGTGTGT GT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	1/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61621051	A A	ATATATAT others(23): Show ATATATATATATATATGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG03239.hp1 HG03669.hp1 HG01243.hp1 HG03239.hp1 HG03669.hp1	a0002 a0003 a0002 a0003	a0002c0002 a0003c0012 a0002c0002 a0003c0012	a0002c0002t0002 a0002c0002t0011 a0003c0012t0012 a0002c0002t0002 a0002c0002t0011 a0003c0012t0012	a0002c0002t0002g0078 a0002c0002t0011g0056 a0003c0012t0012g0049 a0002c0002t0002g0078 a0002c0002t0011g0056 a0003c0012t0012g0049	3	36	0.0833	30	c.85+ others(47): Show c.85+58680_85+58681insATATATATATATATGTGTGTGTGTGTGT GT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	1/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61621051	A A	ATATATAT others(23): Show ATATATATATATATGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG03239.hp2 HG03239.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0079 a0001c0001t0001g0079	1	34	0.0294	30	c.85+ others(47): Show c.85+58680_85+58681insATATATATATATGTGTGTGTGTGTGTGT GT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	1/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	62265896	T T	TACACACA others(23): Show TACACACACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02027.hp1 HG02027.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0008 a0002c0003t0008	a0002c0003t0008g0016 a0002c0003t0008g0016	1	9	0.1111	30	c.265 others(49): Show c.2657-1513_2657-1484dupACACACACACACACACACACACACAC ACAC	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	17/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	62265896	T T	TATACACA others(23): Show TATACACACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG04199.hp2 HG04199.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0046 a0002c0002t0002g0046	1	9	0.1111	30	c.265 others(49): Show c.2657-1513_2657-1512insTACACACACACACACACACACACACA CACA	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	17/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	62281538	C C	CTTTTTTT others(23): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02145.hp1 NA19087.hp2 HG02145.hp1 NA19087.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0045 a0001c0001t0001g0090 a0001c0001t0001g0045 a0001c0001t0001g0090	2	9	0.2222	30	c.376 others(45): Show c.3766-12_3766-11insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	26/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRJ_chr11_47975559_48175839	48159122	G G	GGGGTGTG others(23): Show GGGGTGTGTGTGTCTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	NA20905.hp2 NA20905.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0009 a0001c0005t0009	a0001c0005t0009g0206 a0001c0005t0009g0206	1	17	0.0588	30	c.343 others(47): Show c.3439-807_3439-806insGGTGTGTGTGTCTGTGTGTGTGTGTGTG TG	PTPRJ	ENSG00000149177.15	transcript	ENST00000418331.7	protein_coding	21/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
PTPRK_chr6_127963785_128525599	128322685	T T	TATATATA others(23): Show TATATATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0029 a0001c0003t0002g0029	1	52	0.0192	30	c.224 others(45): Show c.224-376_224-375insGTATATATATATATATATATATATATATAT	PTPRK	ENSG00000152894.15	transcript	ENST00000368226.9	protein_coding	2/29			chr6	TogoVar
PTPRM_chr18_7562316_8411856	7772244	T T	TTTTTCTT others(23): Show TTTTTCTTTTCTTTTCTTTTCTTTTCTTTTC	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0059 a0001c0001t0001g0059	1	16	0.0625	30	c.74- others(45): Show c.74-1891_74-1862dupTCTTTTCTTTTCTTTTCTTTTCTTTTCTTT	PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	1/32		INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRM_chr18_7562316_8411856	7984950	T T	TATATAAT others(23): Show TATATAATTATATACATATAATTATATATAC	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02559.hp1 HG01891.hp2 HG02559.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0001 a0001c0001t0001 a0001c0003t0001	a0001c0001t0001g0058 a0001c0003t0001g0019 a0001c0001t0001g0058 a0001c0003t0001g0019	2	80	0.0250	30	c.113 others(51): Show c.1132+29559_1132+29588dupATATATACATATAATTATATACAT ATAATT	PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	7/32		INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRM_chr18_7562316_8411856	7984973	A A	ATATATAC others(23): Show ATATATACATATAATTATATACATATAATTG	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0018 a0001c0018	a0001c0018t0003 a0001c0018t0003	a0001c0018t0003g0079 a0001c0018t0003g0079	1	79	0.0127	30	c.113 others(51): Show c.1132+29580_1132+29609dupCATATAATTGTATATACATATAAT TATATA	PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	7/32		INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRM_chr18_7562316_8411856	8054298	A A	AATATATA others(23): Show AATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG03130.hp1 HG03516.hp1 HG02723.hp1 HG03130.hp1 HG03516.hp1	a0001 a0002 a0001 a0002	a0001c0005 a0002c0007 a0002c0010 a0001c0005 a0002c0007 a0002c0010	a0001c0005t0003 a0002c0007t0001 a0002c0010t0001 a0001c0005t0003 a0002c0007t0001 a0002c0010t0001	a0001c0005t0003g0074 a0002c0007t0001g0010 a0002c0010t0001g0047 a0001c0005t0003g0074 a0002c0007t0001g0010 a0002c0010t0001g0047	3	28	0.1071	30	c.113 others(51): Show c.1133-15364_1133-15363insATATATATATATATATATATATAT ATATAT	PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	7/32		INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRM_chr18_7562316_8411856	8206268	A A	ATTTTATT others(23): Show ATTTTATTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0071 a0001c0003t0003g0071	1	75	0.0133	30	c.230 others(51): Show c.2301-37786_2301-37785insATTTTTTTTTTTTTTTTTTTTTTT TTTTTT	PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	14/32		INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRO_chr12_15317508_15603331	15319948	A A	AATATATA others(23): Show AATATATATATATATATATATATATATATAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01123.hp1 HG01123.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0119 a0001c0001t0001g0119	1	90	0.0111	30	c.-27 others(41): Show c.-2779_-2778insATATATATATATATATATATATATATATAC	PTPRO	ENSG00000151490.15	transcript	ENST00000281171.9	protein_coding		2559		chr12	TogoVar
PTPRQ_chr12_80439235_80685273	80558119	C C	CTTTCTTT others(23): Show CTTTCTTTTCTTTTCTTTTCTTTTCTTTTCT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG02257.hp2 HG03139.hp2 others(1): Show HG00280.hp1 HG02257.hp2 HG03139.hp2 NA18955.hp1	a0002 a0031 a0050 others(1): Show a0002 a0031 a0050 a0065	a0002c0029 a0031c0075 a0050c0073 others(1): Show a0002c0029 a0031c0075 a0050c0073 a0065c0034	a0002c0029t0001 a0031c0075t0004 a0050c0073t0003 others(1): Show a0002c0029t0001 a0031c0075t0004 a0050c0073t0003 a0065c0034t0001	a0002c0029t0001g0022 a0031c0075t0004g0088 a0050c0073t0003g0096 others(1): Show a0002c0029t0001g0022 a0031c0075t0004g0088 a0050c0073t0003g0096 a0065c0034t0001g0014	4	65	0.0615	30	c.428 others(49): Show c.4285+8408_4285+8437dupTCTTTTCTTTTCTTTTCTTTTCTTTT CTTT	PTPRQ	ENSG00000139304.16	transcript	ENST00000644991.3	protein_coding	25/44		INFO_REALIGN_3_PRIME	chr12	TogoVar
PTPRS_chr19_5200508_5345812	5303954	A A	AAAAAAAA others(23): Show AAAAAAAAAAAAATAAAAAAAAAAAAATAAT	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG03017.hp2 HG03209.hp1 others(4): Show HG01069.hp1 HG03017.hp2 HG03209.hp1 HG03239.hp2 HG03453.hp1 HG03490.hp1 NA19030.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0005 others(3): Show a0001c0002 a0001c0003 a0001c0005 a0001c0008 a0001c0020 a0001c0030	a0001c0002t0003 a0001c0003t0004 a0001c0005t0003 others(3): Show a0001c0002t0003 a0001c0003t0004 a0001c0005t0003 a0001c0008t0007 a0001c0020t0001 a0001c0030t0008	a0001c0002t0003g0146 a0001c0003t0004g0106 a0001c0003t0004g0112 others(4): Show a0001c0002t0003g0146 a0001c0003t0004g0106 a0001c0003t0004g0112 a0001c0005t0003g0173 a0001c0008t0007g0108 a0001c0020t0001g0174 a0001c0030t0008g0027	7	154	0.0455	30	c.-94 others(49): Show c.-94-17721_-94-17720insATTATTTTTTTTTTTTTATTTTTTTT TTTT	PTPRS	ENSG00000105426.19	transcript	ENST00000262963.11	protein_coding	1/37			chr19	TogoVar
PTPRS_chr19_5200508_5345812	5303954	A A	AAAAAAAA others(23): Show AAAAAAAAAATAATAAAAAAAAAAAAATAAT	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01261.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0012 a0001c0002t0012	a0001c0002t0012g0118 a0001c0002t0012g0118	1	148	0.0068	30	c.-94 others(49): Show c.-94-17721_-94-17720insATTATTTTTTTTTTTTTATTATTTTT TTTT	PTPRS	ENSG00000105426.19	transcript	ENST00000262963.11	protein_coding	1/37			chr19	TogoVar
PTPRT_chr20_42067756_43194906	42184535	C C	CTCTTCTT others(23): Show CTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG00741.hp1	a0005 a0005	a0005c0017 a0005c0017	a0005c0017t0017 a0005c0017t0017	a0005c0017t0017g0022 a0005c0017t0017g0022	1	37	0.0270	30	c.249 others(51): Show c.2491+14704_2491+14705insAGAAGAAGAAGAAGAAGAAGAAGA AGAAGA	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	16/30			chr20	TogoVar
PTPRT_chr20_42067756_43194906	42184541	C C	CTCTTCTT others(23): Show CTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	intron_variant intron_variant	MODIFIER	HG02155.hp2 HG02155.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0019 a0002c0001t0019	a0002c0001t0019g0023 a0002c0001t0019g0023	1	11	0.0909	30	c.249 others(51): Show c.2491+14698_2491+14699insAGAAGAAGAAGAAGAAGAAGAAGA AGAAGA	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	16/30			chr20	TogoVar
PTPRT_chr20_42067756_43194906	42363300	A A	ATATATAT others(23): Show ATATATATATATATATATATTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0058 a0001c0002t0002g0058	1	44	0.0227	30	c.156 others(51): Show c.1561-11016_1561-11015insAAAAAAAAAAAATATATATATATA TATATA	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	9/30			chr20	TogoVar
PTPRT_chr20_42067756_43194906	42404972	T T	TTATATAT others(23): Show TTATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02647.hp2 HG02109.hp1 HG02647.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0018 a0001c0003t0020 a0001c0003t0018 a0001c0003t0020	a0001c0003t0018g0046 a0001c0003t0020g0047 a0001c0003t0018g0046 a0001c0003t0020g0047	2	17	0.1176	30	c.156 others(51): Show c.1560+43247_1560+43248insTATATATATATATATATATATATA TATATA	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	9/30			chr20	TogoVar
PTPRT_chr20_42067756_43194906	42404972	T T	TTTTATAT others(23): Show TTTTATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG02976.hp2 HG00738.hp2 HG02976.hp2	a0001 a0009 a0001 a0009	a0001c0025 a0009c0019 a0001c0025 a0009c0019	a0001c0025t0015 a0009c0019t0008 a0001c0025t0015 a0009c0019t0008	a0001c0025t0015g0028 a0009c0019t0008g0050 a0001c0025t0015g0028 a0009c0019t0008g0050	2	17	0.1176	30	c.156 others(51): Show c.1560+43247_1560+43248insTATATATATATATATATATATATA TATAAA	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	9/30			chr20	TogoVar
PTPRT_chr20_42067756_43194906	42569077	A A	AATATATA others(23): Show AATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0021 a0001c0021	a0001c0021t0001 a0001c0021t0001	a0001c0021t0001g0053 a0001c0021t0001g0053	1	50	0.0200	30	c.115 others(51): Show c.1154-96516_1154-96515insATATATATATATATATATATATAT ATATAT	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	7/30			chr20	TogoVar
PTPRT_chr20_42067756_43194906	42683271	T T	TTTTTGTT others(23): Show TTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG01496.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0003 a0002c0001t0003	a0002c0001t0003g0008 a0002c0001t0003g0008	1	17	0.0588	30	c.860 others(47): Show c.860-5113_860-5112insCAAAACAAAACAAAACAAAACAAAACAA AA	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	6/30			chr20	TogoVar
PTPRT_chr20_42067756_43194906	43083320	G G	GTGTATAT others(23): Show GTGTATATATATATATATATATATATACACA	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG02896.hp1	a0002 a0002	a0002c0011 a0002c0011	a0002c0011t0006 a0002c0011t0006	a0002c0011t0006g0003 a0002c0011t0006g0003	1	8	0.1250	30	c.88+ others(49): Show c.88+106325_88+106326insTGTGTATATATATATATATATATATA TACA	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	1/30			chr20	TogoVar
PTPRT_chr20_42067756_43194906	43083321	T T	TGTATATA others(23): Show TGTATATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0023 a0001c0002t0023	a0001c0002t0023g0044 a0001c0002t0023g0044	1	61	0.0164	30	c.88+ others(49): Show c.88+106324_88+106325insGTATATATATATATATATATATATAT ATAC	PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	1/30			chr20	TogoVar
PTPRZ1_chr7_121868161_122067036	122023747	T T	TTATATAT others(23): Show TTATATATATAATGTATAATTTTATATATAA	intron_variant intron_variant	MODIFIER	HG02735.hp2 HG02735.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0281 a0002c0002t0001g0281	1	310	0.0032	30	c.498 others(49): Show c.4988+4487_4988+4516dupATAATGTATAATTTTATATATAATAT ATAT	PTPRZ1	ENSG00000106278.12	transcript	ENST00000393386.7	protein_coding	13/29		INFO_REALIGN_3_PRIME	chr7	TogoVar
PTPRZ1_chr7_121868161_122067036	122023757	A A	AATGTATA others(23): Show AATGTATAATTTTATATATAATATATATTAT	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG02572.hp2 HG02622.hp1 others(3): Show HG01496.hp1 HG02572.hp2 HG02622.hp1 HG02970.hp1 HG03579.hp1 NA20300.hp2	a0004 a0007 a0004 a0007	a0004c0008 a0007c0037 a0004c0008 a0007c0037	a0004c0008t0001 a0004c0008t0002 a0007c0037t0004 a0004c0008t0001 a0004c0008t0002 a0007c0037t0004	a0004c0008t0001g0036 a0004c0008t0001g0046 a0004c0008t0001g0205 others(3): Show a0004c0008t0001g0036 a0004c0008t0001g0046 a0004c0008t0001g0205 a0004c0008t0002g0009 a0004c0008t0002g0019 a0007c0037t0004g0211	6	308	0.0195	30	c.498 others(49): Show c.4988+4511_4988+4540dupATATATTATATGTATAATTTTATATA TAAT	PTPRZ1	ENSG00000106278.12	transcript	ENST00000393386.7	protein_coding	13/29		INFO_REALIGN_3_PRIME	chr7	TogoVar

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