JoGo: Joint Open Genome and Omics Platform

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SH3GL2_chr9_17574066_17802124	17622976	G G	GTTTCCTT others(23): Show GTTTCCTTTCCTTTCCTTTCCTTTCCGTTCC	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG00733.hp2 HG01258.hp1 others(5): Show HG00673.hp2 HG00733.hp2 HG01258.hp1 HG02165.hp2 HG02647.hp1 HG02647.hp2 HG03710.hp2 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0001 a0001c0001t0002 a0001c0006t0001 a0001c0001t0001 a0001c0001t0002 a0001c0006t0001	a0001c0001t0001g0032 a0001c0001t0001g0042 a0001c0001t0001g0043 others(5): Show a0001c0001t0001g0032 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0065 a0001c0001t0001g0114 a0001c0001t0001g0222 a0001c0001t0002g0202 a0001c0006t0001g0153	8	260	0.0308	30	c.45+ others(47): Show c.45+43698_45+43699insCTTTCCTTTCCTTTCCGTTCCTTTCCTT TC	SH3GL2	ENSG00000107295.10	transcript	ENST00000380607.5	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr9	TogoVar
SH3GL2_chr9_17574066_17802124	17622977	T T	TTTCCTTT others(23): Show TTTCCTTTCCTTTCCTTTCCTTTCCTTTCCG	intron_variant intron_variant	MODIFIER	NA18950.hp2 NA18950.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	260	0.0039	30	c.45+ others(47): Show c.45+43698_45+43699insCTTTCCTTTCCTTTCCTTTCCGTTCCTT TC	SH3GL2	ENSG00000107295.10	transcript	ENST00000380607.5	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr9	TogoVar
SH3GL2_chr9_17574066_17802124	17622982	T T	TTTCCTTT others(23): Show TTTCCTTTCCTTTCCTTTCCGTTCCTTTCCG	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01099.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0127 a0001c0001t0002g0127	1	260	0.0039	30	c.45+ others(47): Show c.45+43698_45+43699insCTTTCCTTTCCTTTCCGTTCCTTTCCGT TC	SH3GL2	ENSG00000107295.10	transcript	ENST00000380607.5	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr9	TogoVar
SH3GLB1_chr1_86699576_86753184	86724892	A A	AATATATA others(23): Show AATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG02922.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0111 a0001c0001t0007g0111	1	318	0.0031	30	c.570 others(45): Show c.570+508_570+509insTATATATATATATATATATATATATATATA	SH3GLB1	ENSG00000097033.15	transcript	ENST00000370558.8	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr1	TogoVar
SH3PXD2A_chr10_103589027_103860576	103801542	T T	TACACACA others(23): Show TACACACACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG01928.hp1 HG02132.hp1 others(8): Show HG00558.hp2 HG01928.hp1 HG02132.hp1 HG02155.hp2 HG02257.hp2 HG02293.hp1 HG02818.hp1 NA18966.hp2 NA19002.hp1 NA19010.hp1 NA19043.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0003 others(4): Show a0001c0001 a0001c0002 a0001c0003 a0001c0008 a0001c0010 a0002c0006 a0003c0019	a0001c0001t0005 a0001c0002t0076 a0001c0002t0087 others(8): Show a0001c0001t0005 a0001c0002t0076 a0001c0002t0087 a0001c0003t0033 a0001c0003t0058 a0001c0003t0060 a0001c0003t0065 a0001c0008t0027 a0001c0010t0028 a0002c0006t0003 a0003c0019t0001	a0001c0001t0005g0187 a0001c0002t0076g0068 a0001c0002t0087g0194 others(8): Show a0001c0001t0005g0187 a0001c0002t0076g0068 a0001c0002t0087g0194 a0001c0003t0033g0067 a0001c0003t0058g0066 a0001c0003t0060g0033 a0001c0003t0065g0025 a0001c0008t0027g0215 a0001c0010t0028g0032 a0002c0006t0003g0125 a0003c0019t0001g0123	11	250	0.0440	30	c.73- others(43): Show c.73-181_73-180insGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	SH3PXD2A	ENSG00000107957.17	transcript	ENST00000369774.9	protein_coding	1/14			chr10	TogoVar
SH3PXD2B_chr5_172328499_172459525	172368468	T T	TTATATAT others(23): Show TTATATATATATATAAAATATATATATATTA	intron_variant intron_variant	MODIFIER	NA19004.hp2 NA19004.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0015 a0001c0003t0015	a0001c0003t0015g0143 a0001c0003t0015g0143	1	280	0.0036	30	c.427 others(47): Show c.427+5292_427+5321dupTAATATATATATATTTTATATATATATA TA	SH3PXD2B	ENSG00000174705.13	transcript	ENST00000311601.6	protein_coding	6/12			chr5	TogoVar
SH3PXD2B_chr5_172328499_172459525	172368496	T T	TTATATAT others(23): Show TTATATATATATATAAAATATATATATATTA	intron_variant intron_variant	MODIFIER	HG02080.hp2 HG02129.hp1 HG04115.hp1 HG02080.hp2 HG02129.hp1 HG04115.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0004 a0001c0002t0007 a0001c0001t0002 a0001c0001t0004 a0001c0002t0007	a0001c0001t0002g0139 a0001c0001t0004g0273 a0001c0002t0007g0108 a0001c0001t0002g0139 a0001c0001t0004g0273 a0001c0002t0007g0108	3	280	0.0107	30	c.427 others(47): Show c.427+5293_427+5294insTAATATATATATATTTTATATATATATA TA	SH3PXD2B	ENSG00000174705.13	transcript	ENST00000311601.6	protein_coding	6/12			chr5	TogoVar
SH3RF1_chr4_169089259_169275956	169145761	A A	ATATATAA others(23): Show ATATATAAAATATATATTCTATATATTATTC	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02630.hp2 HG02886.hp1 others(2): Show HG01109.hp2 HG02630.hp2 HG02886.hp1 HG02965.hp1 HG03225.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0012 a0001c0002t0029 a0001c0002t0003 a0001c0002t0012 a0001c0002t0029	a0001c0002t0003g0008 a0001c0002t0003g0009 a0001c0002t0012g0010 others(2): Show a0001c0002t0003g0008 a0001c0002t0003g0009 a0001c0002t0012g0010 a0001c0002t0012g0016 a0001c0002t0029g0215	5	216	0.0232	30	c.766 others(47): Show c.766-9142_766-9141insGAATAATATATAGAATATATATTTTATA TA	SH3RF1	ENSG00000154447.15	transcript	ENST00000284637.14	protein_coding	4/11			chr4	TogoVar
SH3RF1_chr4_169089259_169275956	169145978	T T	TTATTCTA others(23): Show TTATTCTATATAAAATATTACATATTCTATA	intron_variant intron_variant	MODIFIER	HG02647.hp1 NA19043.hp1 HG02647.hp1 NA19043.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0007c0017 a0001c0001 a0007c0017	a0001c0001t0002 a0007c0017t0002 a0001c0001t0002 a0007c0017t0002	a0001c0001t0002g0142 a0007c0017t0002g0137 a0001c0001t0002g0142 a0007c0017t0002g0137	2	216	0.0093	30	c.766 others(47): Show c.766-9388_766-9359dupTATAGAATATGTAATATTTTATATAGAA TA	SH3RF1	ENSG00000154447.15	transcript	ENST00000284637.14	protein_coding	4/11			chr4	TogoVar
SH3RF3_chr2_109124205_109509634	109190722	G G	GGGTGTCT others(23): Show GGGTGTCTCCCTTCTTTTCCCAGTCACATGA	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0140 a0001c0001t0007g0140	1	172	0.0058	30	c.573 others(49): Show c.573+60610_573+60639dupGGTGTCTCCCTTCTTTTCCCAGTCAC ATGA	SH3RF3	ENSG00000172985.11	transcript	ENST00000309415.8	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
SH3RF3_chr2_109124205_109509634	109458572	C C	CAGAGAGA others(23): Show CAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01192.hp1 HG01256.hp2 others(2): Show HG00738.hp2 HG01192.hp1 HG01256.hp2 HG03486.hp2 NA18945.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0004 a0002c0002 a0001c0001 a0001c0004 a0002c0002	a0001c0001t0001 a0001c0001t0006 a0001c0001t0008 others(2): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0008 a0001c0004t0001 a0002c0002t0001	a0001c0001t0001g0020 a0001c0001t0006g0033 a0001c0001t0008g0015 others(2): Show a0001c0001t0001g0020 a0001c0001t0006g0033 a0001c0001t0008g0015 a0001c0004t0001g0007 a0002c0002t0001g0169	5	172	0.0291	30	c.214 others(49): Show c.2148+9112_2148+9113insGAGAGAGAGAGAGAGAGAGAGAGAGA GAGA	SH3RF3	ENSG00000172985.11	transcript	ENST00000309415.8	protein_coding	8/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
SHANK1_chr19_50654255_50724802	50665737	T T	TAAAAAAA others(23): Show TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02027.hp1 NA18960.hp2 NA18998.hp1 others(1): Show HG02027.hp1 NA18960.hp2 NA18998.hp1 NA19056.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0005 a0001c0002t0016 others(1): Show a0001c0002t0002 a0001c0002t0005 a0001c0002t0016 a0001c0002t0019	a0001c0002t0002g0295 a0001c0002t0005g0116 a0001c0002t0016g0112 others(1): Show a0001c0002t0002g0295 a0001c0002t0005g0116 a0001c0002t0016g0112 a0001c0002t0019g0272	4	316	0.0127	30	c.576 others(47): Show c.5768+454_5768+455insTTTTTTTTTTTTTTTTTTTTTTTTTTTT TT	SHANK1	ENSG00000161681.17	transcript	ENST00000293441.6	protein_coding	23/23			chr19	TogoVar
SHANK1_chr19_50654255_50724802	50678919	T T	TTACAAGC others(23): Show TTACAAGCATTACAGGTAAGGGGTGAGGGTG	intron_variant intron_variant	MODIFIER	HG01993.hp2 HG01993.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0012 a0001c0002t0012	a0001c0002t0012g0134 a0001c0002t0012g0134	1	316	0.0032	30	c.257 others(49): Show c.2578-6806_2578-6805insCACCCTCACCCCTTACCTGTAATGCT TGTA	SHANK1	ENSG00000161681.17	transcript	ENST00000293441.6	protein_coding	21/23			chr19	TogoVar
SHANK1_chr19_50654255_50724802	50692456	G G	GATATATA others(23): Show GATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02976.hp2 HG03017.hp1 others(1): Show HG02647.hp1 HG02976.hp2 HG03017.hp1 HG03195.hp2	a0001 a0008 a0001 a0008	a0001c0002 a0001c0003 a0001c0009 others(1): Show a0001c0002 a0001c0003 a0001c0009 a0008c0030	a0001c0002t0003 a0001c0003t0099 a0001c0009t0007 others(1): Show a0001c0002t0003 a0001c0003t0099 a0001c0009t0007 a0008c0030t0071	a0001c0002t0003g0276 a0001c0003t0099g0308 a0001c0009t0007g0270 others(1): Show a0001c0002t0003g0276 a0001c0003t0099g0308 a0001c0009t0007g0270 a0008c0030t0071g0072	4	316	0.0127	30	c.196 others(49): Show c.1965-3178_1965-3177insATATATATATATATATATATATATAT ATAT	SHANK1	ENSG00000161681.17	transcript	ENST00000293441.6	protein_coding	15/23			chr19	TogoVar
SHANK1_chr19_50654255_50724802	50707876	T T	TTTTTCTT others(23): Show TTTTTCTTTTCTTTTCTTTTCTTTTCTTTTC	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG00738.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0005 a0002c0001t0005	a0002c0001t0005g0169 a0002c0001t0005g0169	1	316	0.0032	30	c.107 others(49): Show c.1078-3392_1078-3363dupGAAAAGAAAAGAAAAGAAAAGAAAAG AAAA	SHANK1	ENSG00000161681.17	transcript	ENST00000293441.6	protein_coding	8/23			chr19	TogoVar
SHC3_chr9_89000771_89183818	89080755	A A	ATATATAT others(23): Show ATATATATGTATATATATATATATATATATG	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0046 a0001c0003t0046	a0001c0003t0046g0007 a0001c0003t0046g0007	1	188	0.0053	30	c.546 others(47): Show c.546-2853_546-2852insCATATATATATATATATATATACATATA TA	SHC3	ENSG00000148082.10	transcript	ENST00000375835.9	protein_coding	2/11			chr9	TogoVar
SHC3_chr9_89000771_89183818	89182522	A A	AAAAATAA others(23): Show AAAAATAAAATAACATAAAATAACATAAAAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp1 HG01106.hp2 HG01261.hp2 HG00280.hp1 HG01106.hp2 HG01261.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0004 a0001c0002t0006 a0001c0001t0004 a0001c0002t0006	a0001c0001t0004g0061 a0001c0002t0006g0059 a0001c0002t0006g0173 a0001c0001t0004g0061 a0001c0002t0006g0059 a0001c0002t0006g0173	3	188	0.0160	30	c.-40 others(41): Show c.-4063_-4062insATTTTATGTTATTTTATGTTATTTTATTTT	SHC3	ENSG00000148082.10	transcript	ENST00000375835.9	protein_coding		3705		chr9	TogoVar
SHC4_chr15_48818741_48968919	48919295	A A	ATTTTTTT others(23): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02630.hp1 HG02818.hp1 others(3): Show HG02622.hp2 HG02630.hp1 HG02818.hp1 HG03540.hp2 NA18747.hp2 NA19000.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 others(1): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 a0001c0001t0012	a0001c0001t0001g0023 a0001c0001t0001g0108 a0001c0001t0004g0184 others(3): Show a0001c0001t0001g0023 a0001c0001t0001g0108 a0001c0001t0004g0184 a0001c0001t0006g0088 a0001c0001t0006g0195 a0001c0001t0012g0017	6	384	0.0156	30	c.656 others(47): Show c.656+5583_656+5584insAAAAAAAAAAAAAAAAAAAAAAAAAAAA AA	SHC4	ENSG00000185634.12	transcript	ENST00000332408.9	protein_coding	2/11			chr15	TogoVar
SHCBP1L_chr1_182894865_182958166	182924699	A A	AGGAAAGG others(23): Show AGGAAAGGAAAGGAAAGGAAAGGAAAGGAAG	intron_variant intron_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0071 a0001c0003t0001g0071	1	302	0.0033	30	c.118 others(49): Show c.1182+4947_1182+4948insCTTCCTTTCCTTTCCTTTCCTTTCCT TTCC	SHCBP1L	ENSG00000157060.16	transcript	ENST00000367547.8	protein_coding	6/9			chr1	TogoVar
SHCBP1L_chr1_182894865_182958166	182924976	A A	AAGAAAGA others(23): Show AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG03486.hp2 NA18970.hp2 HG03486.hp2 NA18970.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0271 a0002c0002t0001g0014 a0001c0001t0001g0271 a0002c0002t0001g0014	2	302	0.0066	30	c.118 others(49): Show c.1182+4670_1182+4671insCTTTCTTTCTTTCTTTCTTTCTTTCT TTCT	SHCBP1L	ENSG00000157060.16	transcript	ENST00000367547.8	protein_coding	6/9			chr1	TogoVar
SHCBP1_chr16_46573591_46626379	46610544	A A	ATTTTTTT others(23): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01257.hp2 HG01257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0088 a0001c0001t0001g0088	1	184	0.0054	30	c.597 others(47): Show c.597-2156_597-2155insAAAAAAAAAAAAAAAAAAAAAAAAAAAA AA	SHCBP1	ENSG00000171241.9	transcript	ENST00000303383.8	protein_coding	4/12			chr16	TogoVar
SHH_chr7_155794980_155817463	155795293	G G	GTTTTTTT others(23): Show GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0040 a0001c0001t0040	a0001c0001t0040g0141 a0001c0001t0040g0141	1	414	0.0024	30	c.76 others(41): Show c.7606_*7607insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	SHH	ENSG00000164690.8	transcript	ENST00000297261.7	protein_coding		4686		chr7	TogoVar
SHISA5_chr3_48462876_48509174	48481441	A A	AAAAATAA others(23): Show AAAAATAAAATAAAATAAAATAAAATAAAAT	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG02145.hp1 HG02735.hp2 others(7): Show HG00544.hp2 HG02145.hp1 HG02735.hp2 HG02886.hp2 HG02896.hp1 HG06807.hp2 NA18963.hp1 NA19065.hp1 NA19076.hp1 NA19087.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0001 a0001c0002t0005 a0002c0003t0001 a0001c0001t0001 a0001c0002t0005 a0002c0003t0001	a0001c0001t0001g0024 a0001c0001t0001g0027 a0001c0001t0001g0029 others(7): Show a0001c0001t0001g0024 a0001c0001t0001g0027 a0001c0001t0001g0029 a0001c0001t0001g0035 a0001c0001t0001g0040 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0096 a0001c0002t0005g0101 a0002c0003t0001g0023	10	290	0.0345	30	c.234 others(47): Show c.234-2214_234-2185dupATTTTATTTTATTTTATTTTATTTTATT TT	SHISA5	ENSG00000164054.17	transcript	ENST00000296444.7	protein_coding	2/5			chr3	TogoVar
SHISA5_chr3_48462876_48509174	48486310	A A	ATGTTATA others(23): Show ATGTTATATATGTATAATATATATATAACAT	intron_variant intron_variant	MODIFIER	HG03239.hp2 NA20905.hp1 HG03239.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0009 a0001c0001t0001g0009	2	290	0.0069	30	c.234 others(47): Show c.234-7054_234-7053insATGTTATATATATATTATACATATATAA CA	SHISA5	ENSG00000164054.17	transcript	ENST00000296444.7	protein_coding	2/5			chr3	TogoVar
SHISA6_chr17_11236213_11569063	11277280	T T	TCTCTCTC others(23): Show TCTCTCTCTCTCTCTCTCACACACACACACA	intron_variant intron_variant	MODIFIER	NA19084.hp1 NA19084.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0094 a0001c0002t0003g0094	1	192	0.0052	30	c.799 others(49): Show c.799+13755_799+13756insTCTCTCTCTCTCTCTCACACACACAC ACAC	SHISA6	ENSG00000188803.15	transcript	ENST00000441885.8	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr17	TogoVar
SHISA6_chr17_11236213_11569063	11277280	T T	TCTCTCTC others(23): Show TCTCTCTCTCTCTCTCTCTCTCTCTCACACA	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0072 a0001c0001t0007g0072	1	192	0.0052	30	c.799 others(49): Show c.799+13755_799+13756insTCTCTCTCTCTCTCTCTCTCTCTCAC ACAC	SHISA6	ENSG00000188803.15	transcript	ENST00000441885.8	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr17	TogoVar
SHISA9_chr16_12896598_13245416	12970408	T T	TATATATA others(23): Show TATATATACATATATGTATATATATATATAC	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01167.hp2 HG02145.hp1 others(1): Show HG01074.hp2 HG01167.hp2 HG02145.hp1 HG02523.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0004 a0001c0001t0026 others(1): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0026 a0001c0002t0060	a0001c0001t0001g0120 a0001c0001t0004g0006 a0001c0001t0026g0065 others(1): Show a0001c0001t0001g0120 a0001c0001t0004g0006 a0001c0001t0026g0065 a0001c0002t0060g0183	4	214	0.0187	30	c.691 others(49): Show c.691+53600_691+53601insCATATATGTATATATATATATACATA TATA	SHISA9	ENSG00000237515.10	transcript	ENST00000558583.3	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr16	TogoVar
SHISA9_chr16_12896598_13245416	13015890	C C	CTTTCTTT others(23): Show CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	intron_variant intron_variant	MODIFIER	HG02300.hp1 HG02300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0163 a0001c0001t0002g0163	1	214	0.0047	30	c.691 others(49): Show c.691+99094_691+99095insCTTTCTTTCTTTTTCTTTCTTTCTTT CTTT	SHISA9	ENSG00000237515.10	transcript	ENST00000558583.3	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr16	TogoVar
SHISA9_chr16_12896598_13245416	13140128	T T	TCCCTCCC others(23): Show TCCCTCCCCTCCCCTCCCCTCCCCTCCCCTC	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02055.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0037 a0001c0001t0037	a0001c0001t0037g0157 a0001c0001t0037g0157	1	214	0.0047	30	c.692 others(49): Show c.692-63262_692-63261insCCCCTCCCCTCCCCTCCCCTCCCCTC CCCT	SHISA9	ENSG00000237515.10	transcript	ENST00000558583.3	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr16	TogoVar
SHISA9_chr16_12896598_13245416	13142989	C C	CTTTTATT others(23): Show CTTTTATTTTATTTTATTTTATTTTATTTTA	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG02922.hp2 NA19012.hp2 HG00280.hp2 HG02922.hp2 NA19012.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0028 a0001c0001t0001 a0001c0001t0002 a0001c0001t0028	a0001c0001t0001g0094 a0001c0001t0002g0177 a0001c0001t0028g0137 a0001c0001t0001g0094 a0001c0001t0002g0177 a0001c0001t0028g0137	3	214	0.0140	30	c.692 others(49): Show c.692-60399_692-60370dupTTTTATTTTATTTTATTTTATTTTAT TTTA	SHISA9	ENSG00000237515.10	transcript	ENST00000558583.3	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr16	TogoVar
SHISAL1_chr22_44238665_44317951	44241646	C C	CTTTTTTT others(23): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00408.hp1 HG00408.hp1	a0001 a0001	a0001c0107 a0001c0107	a0001c0107t0006 a0001c0107t0006	a0001c0107t0006g0216 a0001c0107t0006g0216	1	380	0.0026	30	c.80 others(41): Show c.8038_*8039insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	SHISAL1	ENSG00000138944.8	transcript	ENST00000381176.5	protein_coding		2018		chr22	TogoVar
SHISAL1_chr22_44238665_44317951	44261077	T T	TTATATAT others(23): Show TTATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02015.hp1 HG02809.hp2 HG03041.hp2 others(3): Show HG02015.hp1 HG02809.hp2 HG03041.hp2 HG03471.hp1 NA19003.hp1 NA19082.hp1	a0001 a0001	a0001c0049 a0001c0060 a0001c0163 others(3): Show a0001c0049 a0001c0060 a0001c0163 a0001c0182 a0001c0228 a0001c0349	a0001c0049t0074 a0001c0060t0001 a0001c0163t0021 others(3): Show a0001c0049t0074 a0001c0060t0001 a0001c0163t0021 a0001c0182t0001 a0001c0228t0075 a0001c0349t0017	a0001c0049t0074g0137 a0001c0060t0001g0234 a0001c0163t0021g0158 others(3): Show a0001c0049t0074g0137 a0001c0060t0001g0234 a0001c0163t0021g0158 a0001c0182t0001g0184 a0001c0228t0075g0262 a0001c0349t0017g0034	6	380	0.0158	30	c.600 others(49): Show c.600-11393_600-11392insTATATATATATATATATATATATATA TATA	SHISAL1	ENSG00000138944.8	transcript	ENST00000381176.5	protein_coding	4/4			chr22	TogoVar
SHISAL2A_chr1_52628168_52662065	52645396	C C	CGTTTTGT others(23): Show CGTTTTGTTTTGTTTTGTTTTGTTTTGTTTT	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00323.hp2 HG00408.hp2 others(91): Show HG00323.hp1 HG00323.hp2 HG00408.hp2 HG00438.hp2 HG00544.hp1 HG00609.hp1 HG00735.hp1 HG01069.hp1 HG01074.hp1 HG01106.hp1 HG01123.hp1 HG01169.hp1 HG01169.hp2 HG01192.hp2 HG01255.hp2 HG01346.hp1 HG01358.hp1 HG01358.hp2 HG01515.hp1 HG01516.hp2 HG01517.hp2 HG01943.hp2 HG02015.hp1 HG02027.hp2 HG02040.hp1 HG02056.hp2 HG02074.hp1 HG02083.hp2 HG02132.hp2 HG02523.hp1 HG02615.hp1 HG02698.hp1 HG02735.hp1 HG02886.hp2 HG03017.hp2 HG03453.hp2 HG03490.hp1 HG03492.hp2 HG03540.hp2 HG03688.hp1 HG03688.hp2 HG03710.hp2 HG03831.hp2 HG03834.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 NA18612.hp1 NA18747.hp2 NA18945.hp1 NA18946.hp2 NA18947.hp2 NA18948.hp1 NA18949.hp1 NA18950.hp2 NA18954.hp1 NA18954.hp2 NA18956.hp2 NA18962.hp1 NA18963.hp1 NA18964.hp2 NA18965.hp2 NA18968.hp1 NA18968.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp2 NA18978.hp2 NA18979.hp2 NA18980.hp1 NA18981.hp2 NA18984.hp2 NA18988.hp2 NA18991.hp2 NA18994.hp1 NA18998.hp1 NA19000.hp1 NA19001.hp2 NA19002.hp2 NA19004.hp1 NA19004.hp2 NA19009.hp2 NA19012.hp1 NA19043.hp1 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19064.hp1 NA19065.hp1 NA19066.hp1 NA19078.hp2 NA19085.hp2 NA19090.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0001c0003 a0005c0005 a0001c0001 a0001c0003 a0005c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0003t0002 a0005c0005t0001	a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 others(83): Show a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0019 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0102 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0159 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0170 a0001c0001t0001g0172 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0181 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0255 a0001c0001t0001g0263 a0001c0001t0001g0276 a0001c0001t0001g0277 a0001c0001t0001g0278 a0001c0001t0001g0279 a0001c0001t0001g0280 a0001c0001t0001g0284 a0001c0001t0001g0372 a0001c0001t0001g0417 a0001c0001t0002g0041 a0001c0001t0004g0002 a0001c0001t0004g0030 a0001c0001t0004g0126 a0001c0001t0004g0160 a0001c0001t0004g0161 a0001c0001t0004g0162 a0001c0001t0004g0183 a0001c0003t0002g0042 a0001c0003t0002g0043 a0005c0005t0001g0189	94	444	0.2117	30	c.322 others(47): Show c.322+2423_322+2424insTGTTTTGTTTTGTTTTGTTTTGTTTTGT TT	SHISAL2A	ENSG00000182183.15	transcript	ENST00000517870.2	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr1	TogoVar
SHLD1_chr20_5745401_5869395	5844799	A A	ATATATAT others(23): Show ATATATATTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02717.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0002 a0002c0004t0002	a0002c0004t0002g0081 a0002c0004t0002g0081	1	328	0.0031	30	c.179 others(49): Show c.179-18224_179-18223insATATATTTTTTTTTTTTTTTTTTTTT TTTT	SHLD1	ENSG00000171984.15	transcript	ENST00000303142.11	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr20	TogoVar
SHOX2_chr3_158090905_158111420	158096909	T T	TATATATA others(23): Show TATATATATATATATATATGGCAAATATATG	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01069.hp2 HG03130.hp2 HG01069.hp2 HG03130.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0063 a0001c0001t0064 a0001c0001t0063 a0001c0001t0064	a0001c0001t0063g0069 a0001c0001t0064g0067 a0001c0001t0063g0069 a0001c0001t0064g0067	2	380	0.0053	30	c.11 others(41): Show c.1117_*1118insCATATATTTGCCATATATATATATATATAT	SHOX2	ENSG00000168779.21	transcript	ENST00000483851.7	protein_coding	5/5	1117		chr3	TogoVar
SHOX2_chr3_158090905_158111420	158106571	C C	CAGAGAGA others(23): Show CAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01517.hp2 NA18965.hp1 HG01517.hp2 NA18965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0039 a0001c0001t0002g0003 a0001c0001t0001g0039 a0001c0001t0002g0003	2	380	0.0053	30	c.-57 others(39): Show c.-577_-548dupCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	SHOX2	ENSG00000168779.21	transcript	ENST00000483851.7	protein_coding		152		chr3	TogoVar
SHOX_chrX_625791_656584	628650	T T	TGTCTCTC others(23): Show TGTCTCTCCCTTTGTCTCTCTCTGTCTCTCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0161 a0001c0001t0161	a0001c0001t0161g0086 a0001c0001t0161g0086	1	220	0.0046	30	c.-22 others(41): Show c.-2248_-2247insGTCTCTCCCTTTGTCTCTCTCTGTCTCTCC	SHOX	ENSG00000185960.15	transcript	ENST00000686671.1	protein_coding		2140		chrX	TogoVar
SHOX_chrX_625791_656584	636970	A A	ATATATAT others(23): Show ATATATATATATATATATATATATATTTTTT	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0096 a0001c0001t0096	a0001c0001t0096g0121 a0001c0001t0096g0121	1	220	0.0046	30	c.486 others(47): Show c.486+2145_486+2146insATATATATATATATATATATATATTTTT TT	SHOX	ENSG00000185960.15	transcript	ENST00000686671.1	protein_coding	2/4		INFO_REALIGN_3_PRIME	chrX	TogoVar
SHOX_chrX_625791_656584	648942	C C	CTTTCTTT others(23): Show CTTTCTTTCTTTTCTTTCTTTGTTTCTTTCT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01975.hp2 HG01975.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0149 a0001c0001t0149	a0001c0001t0149g0134 a0001c0001t0149g0134	1	220	0.0046	30	c.43 others(41): Show c.4309_*4310insCTTTCTTTTCTTTCTTTGTTTCTTTCTTTT	SHOX	ENSG00000185960.15	transcript	ENST00000686671.1	protein_coding	5/5	4310	INFO_REALIGN_3_PRIME	chrX	TogoVar
SHPK_chr17_3603240_3641250	3635236	A A	AGGAAGGA others(23): Show AGGAAGGAAGGAAGGAAGGGAAGGAAGGAAG	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0012 a0002c0002t0012	a0002c0002t0012g0256 a0002c0002t0012g0256	1	382	0.0026	30	c.168 others(45): Show c.168+815_168+816insCTTCCTTCCTTCCCTTCCTTCCTTCCTTCC	SHPK	ENSG00000197417.9	transcript	ENST00000225519.5	protein_coding	1/6			chr17	TogoVar
SHPRH_chr6_145879807_145969358	145934473	T T	TAAATAAA others(23): Show TAAATAAAATAAAATAAAATAAAATAAAATA	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01123.hp2 HG01884.hp1 others(9): Show HG01081.hp1 HG01123.hp2 HG01884.hp1 HG02109.hp1 HG02145.hp1 HG02486.hp1 HG02559.hp2 HG02630.hp2 HG02723.hp1 HG02886.hp2 HG02976.hp2 HG03209.hp2	a0001 a0002 a0001 a0002	a0001c0015 a0002c0004 a0001c0015 a0002c0004	a0001c0015t0014 a0002c0004t0003 a0001c0015t0014 a0002c0004t0003	a0001c0015t0014g0253 a0002c0004t0003g0007 a0002c0004t0003g0264 others(6): Show a0001c0015t0014g0253 a0002c0004t0003g0007 a0002c0004t0003g0264 a0002c0004t0003g0265 a0002c0004t0003g0267 a0002c0004t0003g0269 a0002c0004t0003g0270 a0002c0004t0003g0271 a0002c0004t0003g0272	12	354	0.0339	30	c.299 others(47): Show c.2990+404_2990+433dupTATTTTATTTTATTTTATTTTATTTTAT TT	SHPRH	ENSG00000146414.17	transcript	ENST00000275233.12	protein_coding	13/29			chr6	TogoVar
SHROOM2_chrX_9781429_9954443	9815571	C C	CCTATATC others(23): Show CCTATATCTATATCTATATCTATATCTATAT	intron_variant intron_variant	MODIFIER	HG02273.hp2 HG02273.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0086 a0002c0002t0002g0086	1	256	0.0039	30	c.165 others(49): Show c.165+28867_165+28896dupTCTATATCTATATCTATATCTATATC TATA	SHROOM2	ENSG00000146950.13	transcript	ENST00000380913.8	protein_coding	1/9		INFO_REALIGN_3_PRIME	chrX	TogoVar
SHROOM2_chrX_9781429_9954443	9816580	C C	CCTGCTGC others(23): Show CCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG	intron_variant intron_variant	MODIFIER	HG02698.hp1 HG02698.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0133 a0001c0001t0001g0133	1	256	0.0039	30	c.165 others(49): Show c.165+29873_165+29902dupGCTGCTGCTGCTGCTGCTGCTGCTGC TGCT	SHROOM2	ENSG00000146950.13	transcript	ENST00000380913.8	protein_coding	1/9		INFO_REALIGN_3_PRIME	chrX	TogoVar
SHROOM3_chr4_76430229_76788253	76591637	A A	AACCTCTA others(23): Show AACCTCTATTTACGTGTTATTTAGATCTATT	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG01928.hp1 HG01943.hp1 others(29): Show HG00621.hp2 HG01928.hp1 HG01943.hp1 HG01978.hp1 HG02071.hp2 HG02074.hp2 HG02083.hp2 HG02273.hp1 HG02293.hp1 HG02451.hp2 HG03490.hp1 HG03491.hp1 HG03492.hp2 HG04115.hp1 HG04228.hp1 NA18939.hp2 NA18950.hp2 NA18953.hp2 NA18964.hp1 NA18967.hp1 NA18974.hp1 NA18978.hp2 NA18982.hp2 NA18993.hp1 NA19002.hp2 NA19003.hp1 NA19010.hp2 NA19064.hp1 NA19066.hp2 NA19068.hp1 NA19070.hp2 NA19091.hp2	a0001 a0002 a0003 others(7): Show a0001 a0002 a0003 a0004 a0005 a0014 a0016 a0020 a0021 a0033	a0001c0001 a0002c0002 a0003c0003 others(7): Show a0001c0001 a0002c0002 a0003c0003 a0004c0004 a0005c0005 a0014c0014 a0016c0016 a0020c0029 a0021c0030 a0033c0048	a0001c0001t0008 a0002c0002t0001 a0002c0002t0003 others(10): Show a0001c0001t0008 a0002c0002t0001 a0002c0002t0003 a0002c0002t0010 a0003c0003t0001 a0004c0004t0001 a0005c0005t0004 a0014c0014t0023 a0016c0016t0001 a0016c0016t0010 a0020c0029t0003 a0021c0030t0001 a0033c0048t0001	a0001c0001t0008g0198 a0002c0002t0001g0003 a0002c0002t0001g0010 others(29): Show a0001c0001t0008g0198 a0002c0002t0001g0003 a0002c0002t0001g0010 a0002c0002t0001g0011 a0002c0002t0001g0015 a0002c0002t0001g0021 a0002c0002t0001g0066 a0002c0002t0001g0084 a0002c0002t0001g0086 a0002c0002t0001g0116 a0002c0002t0001g0130 a0002c0002t0001g0164 a0002c0002t0001g0170 a0002c0002t0001g0182 a0002c0002t0003g0197 a0002c0002t0003g0199 a0002c0002t0003g0200 a0002c0002t0003g0209 a0002c0002t0003g0212 a0002c0002t0010g0215 a0003c0003t0001g0085 a0003c0003t0001g0096 a0003c0003t0001g0129 a0003c0003t0001g0171 a0004c0004t0001g0154 a0005c0005t0004g0050 a0014c0014t0023g0072 a0016c0016t0001g0099 a0016c0016t0010g0160 a0020c0029t0003g0190 a0021c0030t0001g0040 a0033c0048t0001g0108	32	218	0.1468	30	c.323 others(49): Show c.323+35877_323+35906dupCTCTATTTACGTGTTATTTAGATCTA TTAC	SHROOM3	ENSG00000138771.16	transcript	ENST00000296043.7	protein_coding	2/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
SHROOM3_chr4_76430229_76788253	76608743	T T	TAGCATAG others(23): Show TAGCATAGCATAGCATAGCATAGCATAGCAC	intron_variant intron_variant	MODIFIER	NA18978.hp2 NA18978.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0084 a0002c0002t0001g0084	1	218	0.0046	30	c.323 others(49): Show c.323+52984_323+52985insTAGCATAGCATAGCATAGCATAGCAC AGCA	SHROOM3	ENSG00000138771.16	transcript	ENST00000296043.7	protein_coding	2/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
SHROOM3_chr4_76430229_76788253	76646225	A A	AATAAATA others(23): Show AATAAATAAATAAATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18962.hp1 NA18982.hp2 NA18962.hp1 NA18982.hp2	a0002 a0015 a0002 a0015	a0002c0002 a0015c0032 a0002c0002 a0015c0032	a0002c0002t0001 a0015c0032t0008 a0002c0002t0001 a0015c0032t0008	a0002c0002t0001g0003 a0015c0032t0008g0207 a0002c0002t0001g0003 a0015c0032t0008g0207	2	218	0.0092	30	c.324 others(49): Show c.324-63928_324-63927insAATAAATAAATATATATATATATATA TATA	SHROOM3	ENSG00000138771.16	transcript	ENST00000296043.7	protein_coding	2/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
SHROOM3_chr4_76430229_76788253	76646225	A A	AATAAATA others(23): Show AATAAATAAATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0015 a0002c0002t0001g0015	1	218	0.0046	30	c.324 others(49): Show c.324-63928_324-63927insAATAAATATATATATATATATATATA TATA	SHROOM3	ENSG00000138771.16	transcript	ENST00000296043.7	protein_coding	2/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
SHROOM3_chr4_76430229_76788253	76646225	A A	AATAAATA others(23): Show AATAAATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0009 a0009	a0009c0011 a0009c0011	a0009c0011t0034 a0009c0011t0034	a0009c0011t0034g0144 a0009c0011t0034g0144	1	218	0.0046	30	c.324 others(49): Show c.324-63928_324-63927insAATATATATATATATATATATATATA TATA	SHROOM3	ENSG00000138771.16	transcript	ENST00000296043.7	protein_coding	2/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
SHROOM3_chr4_76430229_76788253	76681594	G G	GGGGTGTG others(23): Show GGGGTGTGTGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0015 a0001c0015	a0001c0015t0009 a0001c0015t0009	a0001c0015t0009g0111 a0001c0015t0009g0111	1	218	0.0046	30	c.324 others(49): Show c.324-28561_324-28560insGGTGTGTGTGTGTGTGTGTGTGTGTG TGTG	SHROOM3	ENSG00000138771.16	transcript	ENST00000296043.7	protein_coding	2/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
SHROOM3_chr4_76430229_76788253	76681625	G G	GTGTGTGT others(23): Show GTGTGTGTGTGTGTGTGTGTGTGTGTATGTA	intron_variant intron_variant	MODIFIER	HG01934.hp1 HG02074.hp1 HG02083.hp2 others(8): Show HG01934.hp1 HG02074.hp1 HG02083.hp2 HG03491.hp1 HG03492.hp2 HG03669.hp1 HG04228.hp1 NA18747.hp2 NA18983.hp1 NA19000.hp1 NA19066.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0016 a0033	a0001c0001 a0001c0019 a0002c0002 others(3): Show a0001c0001 a0001c0019 a0002c0002 a0003c0003 a0016c0016 a0033c0048	a0001c0001t0002 a0001c0019t0003 a0002c0002t0001 others(6): Show a0001c0001t0002 a0001c0019t0003 a0002c0002t0001 a0002c0002t0003 a0002c0002t0010 a0002c0002t0018 a0003c0003t0001 a0016c0016t0001 a0033c0048t0001	a0001c0001t0002g0020 a0001c0001t0002g0117 a0001c0019t0003g0211 others(8): Show a0001c0001t0002g0020 a0001c0001t0002g0117 a0001c0019t0003g0211 a0002c0002t0001g0151 a0002c0002t0003g0199 a0002c0002t0003g0200 a0002c0002t0010g0215 a0002c0002t0018g0216 a0003c0003t0001g0074 a0016c0016t0001g0099 a0033c0048t0001g0108	11	218	0.0505	30	c.324 others(49): Show c.324-28522_324-28521insGTGTGTGTGTGTGTGTATGTATGTGT GTGT	SHROOM3	ENSG00000138771.16	transcript	ENST00000296043.7	protein_coding	2/10		INFO_REALIGN_3_PRIME	chr4	TogoVar

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