Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CCDC88B_chr11_64335204_64362534	64336089	C C	CATATATA others(23): Show CATATATATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02818.hp2 HG03209.hp2 HG02818.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0007 a0001c0001t0001g0026 a0001c0001t0001g0007 a0001c0001t0001g0026	2	283	0.0071	30	c.-41 others(41): Show c.-4178_-4177insATATATATATATATATATATATATATATAT	CCDC88B	ENSG00000168071.22	transcript	ENST00000356786.10	protein_coding		4114		chr11	TogoVar
CCDC88B_chr11_64335204_64362534	64336091	C C	CATATATA others(23): Show CATATATATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00735.hp2 HG00735.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0049 a0001c0001t0001g0049	1	231	0.0043	30	c.-41 others(41): Show c.-4176_-4175insATATATATATATATATATATATATATATAT	CCDC88B	ENSG00000168071.22	transcript	ENST00000356786.10	protein_coding		4112		chr11	TogoVar
CCDC88B_chr11_64335204_64362534	64336093	C C	CATATATA others(23): Show CATATATATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01169.hp2 HG01169.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0007 a0001c0001t0001g0007	1	254	0.0039	30	c.-41 others(41): Show c.-4174_-4173insATATATATATATATATATATATATATATAT	CCDC88B	ENSG00000168071.22	transcript	ENST00000356786.10	protein_coding		4110		chr11	TogoVar
CCDC88B_chr11_64335204_64362534	64336112	A A	ATATATAT others(23): Show ATATATATATATATATATATATATATATCTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0156 a0001c0001t0001g0156	1	398	0.0025	30	c.-41 others(41): Show c.-4155_-4154insTATATATATATATATATATATATATATCTC	CCDC88B	ENSG00000168071.22	transcript	ENST00000356786.10	protein_coding		4091		chr11	TogoVar
CCDC88C_chr14_91266323_91422820	91293201	T T	TCCGCTCA others(23): Show TCCGCTCACCTGCCACGGCCCACCTTCCTGC	intron_variant intron_variant	MODIFIER	HG01257.hp2 HG01257.hp2	a0010 a0010	a0010c0025 a0010c0025	a0010c0025t0001 a0010c0025t0001	a0010c0025t0001g0023 a0010c0025t0001g0023	1	280	0.0036	30	c.411 others(47): Show c.4112+971_4112+972insGCAGGAAGGTGGGCCGTGGCAGGTGAGC GG	CCDC88C	ENSG00000015133.20	transcript	ENST00000389857.11	protein_coding	23/29			chr14	TogoVar
CCDC88C_chr14_91266323_91422820	91293493	T T	TCCTCACC others(23): Show TCCTCACCTGCCACAGCCCACCTTCCTGTCC	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02280.hp1 HG01891.hp1 HG02280.hp1	a0011 a0011	a0011c0022 a0011c0022	a0011c0022t0001 a0011c0022t0001	a0011c0022t0001g0030 a0011c0022t0001g0031 a0011c0022t0001g0030 a0011c0022t0001g0031	2	206	0.0097	30	c.411 others(47): Show c.4112+679_4112+680insGGACAGGAAGGTGGGCTGTGGCAGGTGA GG	CCDC88C	ENSG00000015133.20	transcript	ENST00000389857.11	protein_coding	23/29			chr14	TogoVar
CCDC88C_chr14_91266323_91422820	91293537	G G	GGCCCACC others(23): Show GGCCCACCTTCCTGCCCCCTCGCCTGCCACA	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02897.hp2 HG03453.hp1 HG02895.hp1 HG02897.hp2 HG03453.hp1	a0001 a0001	a0001c0006 a0001c0031 a0001c0006 a0001c0031	a0001c0006t0001 a0001c0031t0001 a0001c0006t0001 a0001c0031t0001	a0001c0006t0001g0110 a0001c0006t0001g0111 a0001c0031t0001g0007 a0001c0006t0001g0110 a0001c0006t0001g0111 a0001c0031t0001g0007	3	239	0.0126	30	c.411 others(47): Show c.4112+635_4112+636insTGTGGCAGGCGAGGGGGCAGGAAGGTGG GC	CCDC88C	ENSG00000015133.20	transcript	ENST00000389857.11	protein_coding	23/29			chr14	TogoVar
CCDC88C_chr14_91266323_91422820	91293558	G G	GCCTGCCA others(23): Show GCCTGCCACGGCCCACCTTCCTGCCCCCTCA	intron_variant intron_variant	MODIFIER	HG02602.hp1 HG02602.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0015 a0002c0002t0001g0015	1	163	0.0061	30	c.411 others(47): Show c.4112+614_4112+615insTGAGGGGGCAGGAAGGTGGGCCGTGGCA GG	CCDC88C	ENSG00000015133.20	transcript	ENST00000389857.11	protein_coding	23/29			chr14	TogoVar
CCDC88C_chr14_91266323_91422820	91293567	G G	GGCCCACC others(23): Show GGCCCACCTTCCTGCCCCCTCGCCTGCCACA	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG04115.hp2 NA18957.hp1 others(1): Show HG02723.hp1 HG04115.hp2 NA18957.hp1 NA18979.hp2	a0001 a0002 a0014 a0001 a0002 a0014	a0001c0004 a0001c0006 a0002c0002 others(1): Show a0001c0004 a0001c0006 a0002c0002 a0014c0035	a0001c0004t0001 a0001c0006t0001 a0002c0002t0001 others(1): Show a0001c0004t0001 a0001c0006t0001 a0002c0002t0001 a0014c0035t0001	a0001c0004t0001g0009 a0001c0006t0001g0181 a0002c0002t0001g0149 others(1): Show a0001c0004t0001g0009 a0001c0006t0001g0181 a0002c0002t0001g0149 a0014c0035t0001g0073	4	109	0.0367	30	c.411 others(47): Show c.4112+605_4112+606insTGTGGCAGGCGAGGGGGCAGGAAGGTGG GC	CCDC88C	ENSG00000015133.20	transcript	ENST00000389857.11	protein_coding	23/29			chr14	TogoVar
CCDC88C_chr14_91266323_91422820	91293570	C C	CCACCTTC others(23): Show CCACCTTCCTGCCCCCTCGCCTGCCACAGCT	intron_variant intron_variant	MODIFIER	NA18950.hp1 NA18967.hp2 NA19060.hp1 others(2): Show NA18950.hp1 NA18967.hp2 NA19060.hp1 NA19077.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0007 a0001c0009 a0001c0001 a0001c0007 a0001c0009	a0001c0001t0001 a0001c0007t0001 a0001c0009t0002 a0001c0001t0001 a0001c0007t0001 a0001c0009t0002	a0001c0001t0001g0053 a0001c0001t0001g0103 a0001c0007t0001g0038 others(2): Show a0001c0001t0001g0053 a0001c0001t0001g0103 a0001c0007t0001g0038 a0001c0007t0001g0186 a0001c0009t0002g0260	5	245	0.0204	30	c.411 others(47): Show c.4112+602_4112+603insAGCTGTGGCAGGCGAGGGGGCAGGAAGG TG	CCDC88C	ENSG00000015133.20	transcript	ENST00000389857.11	protein_coding	23/29			chr14	TogoVar
CCDC88C_chr14_91266323_91422820	91293570	C C	CCACCTTC others(23): Show CCACCTTCCTGTCCCCTCGCCTGCCACAGCT	intron_variant intron_variant	MODIFIER	NA18969.hp2 NA18969.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0001 a0001c0007t0001	a0001c0007t0001g0185 a0001c0007t0001g0185	1	241	0.0041	30	c.411 others(47): Show c.4112+602_4112+603insAGCTGTGGCAGGCGAGGGGACAGGAAGG TG	CCDC88C	ENSG00000015133.20	transcript	ENST00000389857.11	protein_coding	23/29			chr14	TogoVar
CCDC88C_chr14_91266323_91422820	91293581	T T	TCCCCTCG others(23): Show TCCCCTCGCCTGCCACAGCCCACCTTCCTGC	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0018 a0018	a0018c0033 a0018c0033	a0018c0033t0007 a0018c0033t0007	a0018c0033t0007g0004 a0018c0033t0007g0004	1	243	0.0041	30	c.411 others(47): Show c.4112+591_4112+592insGCAGGAAGGTGGGCTGTGGCAGGCGAGG GG	CCDC88C	ENSG00000015133.20	transcript	ENST00000389857.11	protein_coding	23/29			chr14	TogoVar
CCDC91_chr12_28185456_28555166	28362280	T T	TTATATAT others(23): Show TTATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0242 a0003c0003t0001g0242	1	122	0.0082	30	c.577 others(45): Show c.577-143_577-142insATATATATATATATATATATATATATATAT	CCDC91	ENSG00000123106.11	transcript	ENST00000536442.6	protein_coding	6/12		INFO_REALIGN_3_PRIME	chr12	TogoVar
CCDC91_chr12_28185456_28555166	28394711	G G	GCTCTCTC others(23): Show GCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG01071.hp1 HG01243.hp1 HG01255.hp2 others(8): Show HG01071.hp1 HG01243.hp1 HG01255.hp2 HG02683.hp2 NA18956.hp1 NA18969.hp2 NA18973.hp2 NA18977.hp1 NA18983.hp2 NA19079.hp2 NA21309.hp2	a0003 a0003	a0003c0003 a0003c0008 a0003c0003 a0003c0008	a0003c0003t0001 a0003c0008t0001 a0003c0003t0001 a0003c0008t0001	a0003c0003t0001g0208 a0003c0003t0001g0216 a0003c0003t0001g0222 others(8): Show a0003c0003t0001g0208 a0003c0003t0001g0216 a0003c0003t0001g0222 a0003c0003t0001g0226 a0003c0003t0001g0227 a0003c0003t0001g0231 a0003c0003t0001g0237 a0003c0003t0001g0238 a0003c0003t0001g0239 a0003c0003t0001g0242 a0003c0008t0001g0225	11	215	0.0512	30	c.762 others(47): Show c.762+3321_762+3322insTCTCTCTCTCTCTCTCTCTCTCTCTCTC TC	CCDC91	ENSG00000123106.11	transcript	ENST00000536442.6	protein_coding	8/12		INFO_REALIGN_3_PRIME	chr12	TogoVar
CCDC91_chr12_28185456_28555166	28510236	C C	CGTGTGTG others(23): Show CGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01243.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0239 a0003c0003t0001g0239	1	207	0.0048	30	c.121 others(51): Show c.1215+26071_1215+26072insGTGTGTGTGTGTGTGTGTGTGTGT GTGTGT	CCDC91	ENSG00000123106.11	transcript	ENST00000536442.6	protein_coding	12/12			chr12	TogoVar
CCDC9B_chr15_40326452_40345939	40333566	T T	TAAAAAAA others(23): Show TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0041 a0001c0001t0041	a0001c0001t0041g0087 a0001c0001t0041g0087	1	105	0.0095	30	c.15 others(41): Show c.1591_*1592insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	CCDC9B	ENSG00000188549.13	transcript	ENST00000397536.7	protein_coding	11/11	1591		chr15	TogoVar
CCKBR_chr11_6254838_6277127	6261462	T T	TATATATA others(23): Show TATATATATATACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	NA18939.hp2 NA18939.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0064 a0002c0002t0001g0064	1	101	0.0099	30	c.151 others(47): Show c.151+1384_151+1385insTATATATATACACACACACACACACACA CA	CCKBR	ENSG00000110148.10	transcript	ENST00000334619.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr11	TogoVar
CCL25_chr19_8047760_8067650	8059153	T T	TATATAAA others(23): Show TATATAAATATATATAAATATATATTATATA	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG03486.hp2 HG02896.hp2 HG03486.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0062 a0002c0002t0001g0159 a0002c0002t0001g0062 a0002c0002t0001g0159	2	267	0.0075	30	c.445 others(47): Show c.445+1238_445+1239insAATATATATAAATATATATTATATAATA TA	CCL25	ENSG00000131142.14	transcript	ENST00000315626.6	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr19	TogoVar
CCL4_chr17_36098827_36110614	36101028	G G	GACATATA others(23): Show GACATATATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01358.hp1 HG06807.hp2 HG01358.hp1 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0010 a0001c0001t0001g0025 a0001c0001t0001g0010 a0001c0001t0001g0025	2	141	0.0142	30	c.-28 others(41): Show c.-2878_-2877insACATATATATATATATATATATATATATAT	CCL4	ENSG00000275302.2	transcript	ENST00000615863.2	protein_coding		2798		chr17	TogoVar
CCN4_chr8_133186039_133236690	133217936	C C	CCACACAC others(23): Show CCACACACACACACACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0036 a0001c0001t0001g0036	1	65	0.0154	30	c.350 others(47): Show c.350-2620_350-2619insACACACACACACACACACACACACACAC AC	CCN4	ENSG00000104415.14	transcript	ENST00000250160.11	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr8	TogoVar
CCNB1_chr5_69162150_69183245	69164026	A A	AAAAAAAA others(23): Show AAAAAAAAAAAAAATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0154 a0001c0002t0001g0154	1	139	0.0072	30	c.-32 others(41): Show c.-3237_-3236insAAAAAAAAAAAAATATATATATATATATAT	CCNB1	ENSG00000134057.15	transcript	ENST00000256442.10	protein_coding		3123		chr5	TogoVar
CCNB1_chr5_69162150_69183245	69175982	A A	AATATATA others(23): Show AATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01496.hp2 NA19082.hp1 NA19083.hp2 HG01496.hp2 NA19082.hp1 NA19083.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0033 a0001c0001t0001g0033	3	106	0.0283	30	c.108 others(47): Show c.1083+449_1083+478dupTATATATATATATATATATATATATATA TA	CCNB1	ENSG00000134057.15	transcript	ENST00000256442.10	protein_coding	7/8		INFO_REALIGN_3_PRIME	chr5	TogoVar
CCNB1_chr5_69162150_69183245	69176012	T T	TATATATA others(23): Show TATATATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02300.hp2 HG02300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0105 a0001c0001t0001g0105	1	417	0.0024	30	c.108 others(47): Show c.1083+478_1083+479insTATATATATATATATATATATATATACA TA	CCNB1	ENSG00000134057.15	transcript	ENST00000256442.10	protein_coding	7/8		INFO_REALIGN_3_PRIME	chr5	TogoVar
CCND2_chr12_4268762_4310353	4291207	C C	CTGTGTGT others(23): Show CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG01256.hp2 HG01258.hp2 others(4): Show HG00621.hp2 HG01256.hp2 HG01258.hp2 HG03942.hp2 NA18960.hp2 NA18965.hp2 NA19064.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0005 a0001c0001t0009 others(2): Show a0001c0001t0004 a0001c0001t0005 a0001c0001t0009 a0001c0001t0018 a0001c0001t0022	a0001c0001t0004g0151 a0001c0001t0005g0244 a0001c0001t0005g0308 others(4): Show a0001c0001t0004g0151 a0001c0001t0005g0244 a0001c0001t0005g0308 a0001c0001t0009g0247 a0001c0001t0018g0313 a0001c0001t0022g0150 a0001c0001t0022g0296	7	31	0.2258	30	c.720 others(47): Show c.720+2244_720+2245insGTGTGTGTGTGTGTGTGTGTGTGTGTGT GT	CCND2	ENSG00000118971.9	transcript	ENST00000261254.8	protein_coding	4/4		INFO_REALIGN_3_PRIME	chr12	TogoVar
CCNJ_chr10_96038583_96065870	96040815	T T	TATATATA others(23): Show TATATATATATATATATATATATATATACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01070.hp1 HG01934.hp1 HG02148.hp2 others(3): Show HG01070.hp1 HG01934.hp1 HG02148.hp2 HG04204.hp2 NA20752.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0007 a0001c0001t0009g0017 a0001c0001t0009g0055 a0001c0001t0009g0007 a0001c0001t0009g0017 a0001c0001t0009g0055	6	404	0.0149	30	c.-29 others(41): Show c.-2946_-2945insATATATATATATATATATATATATATACAC	CCNJ	ENSG00000107443.16	transcript	ENST00000465148.3	protein_coding		2767		chr10	TogoVar
CCNQ_chrX_153582925_153604139	153599211	C C	CCCGCCCC others(23): Show CCCGCCCCTCGCCGCCCCGCCCCGCCCCTCG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02135.hp1 NA19088.hp1 HG02135.hp1 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0057 a0001c0001t0001g0058	2	71	0.0282	30	c.-16 others(39): Show c.-168_-139dupCGAGGGGCGGGGCGGGGCGGCGAGGGGCGG	CCNQ	ENSG00000262919.8	transcript	ENST00000576892.8	protein_coding		73		chrX	TogoVar
CCNT2_chr2_134913822_134964342	134929613	C C	CAGAGAGA others(23): Show CAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG02922.hp2 HG02965.hp2 others(7): Show HG00544.hp2 HG02922.hp2 HG02965.hp2 HG03139.hp1 HG03492.hp1 NA18906.hp1 NA18952.hp1 NA18975.hp2 NA18998.hp2 NA19078.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0004 a0001c0001 a0001c0003 a0001c0004	a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 others(4): Show a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0011 a0001c0001t0024 a0001c0003t0002 a0001c0004t0005	a0001c0001t0004g0233 a0001c0001t0004g0243 a0001c0001t0005g0308 others(7): Show a0001c0001t0004g0233 a0001c0001t0004g0243 a0001c0001t0005g0308 a0001c0001t0006g0289 a0001c0001t0006g0316 a0001c0001t0011g0248 a0001c0001t0011g0250 a0001c0001t0024g0234 a0001c0003t0002g0034 a0001c0004t0005g0175	10	96	0.1042	30	c.241 others(47): Show c.241-7205_241-7204insGAGAGAGAGAGAGAGAGAGAGAGAGAGA GA	CCNT2	ENSG00000082258.13	transcript	ENST00000264157.10	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
CCNT2_chr2_134913822_134964342	134931262	C C	CTTTTTTT others(23): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02080.hp2 HG02080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0080 a0001c0001t0001g0080	1	73	0.0137	30	c.241 others(47): Show c.241-5554_241-5553insTTTTTTTTTTTTTTTTTTTTTTTTTTTT TT	CCNT2	ENSG00000082258.13	transcript	ENST00000264157.10	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
CCNY_chr10_35331509_35577667	35465938	A A	AGAGAGAG others(23): Show AGAGAGAGAGAGAGAGAGAGAGAGAGTGTGT	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG01891.hp1 HG00323.hp2 HG01891.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0005 a0001c0001t0004 a0001c0001t0005	a0001c0001t0004g0018 a0001c0001t0005g0085 a0001c0001t0004g0018 a0001c0001t0005g0085	2	135	0.0148	30	c.155 others(49): Show c.155-17465_155-17464insAGAGAGAGAGAGAGAGAGAGAGAGTG TGTG	CCNY	ENSG00000108100.18	transcript	ENST00000374704.8	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCNY_chr10_35331509_35577667	35516661	C C	CTTCCTTT others(23): Show CTTCCTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01978.hp2 HG01978.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0006 a0001c0001t0006g0006	1	105	0.0095	30	c.365 others(43): Show c.365+40_365+41insCCTTTTTTTTTTTTTTTTTTTTTTTTTTTT	CCNY	ENSG00000108100.18	transcript	ENST00000374704.8	protein_coding	4/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCR3_chr3_46237460_46271706	46242976	T T	TACACATA others(23): Show TACACATATATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02280.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0078 a0001c0001t0001g0078	1	405	0.0025	30	c.-12 others(45): Show c.-12+439_-12+440insCACATATATATATATATATATATATACACA	CCR3	ENSG00000183625.16	transcript	ENST00000395940.3	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
CCR3_chr3_46237460_46271706	46243002	T T	TACACATA others(23): Show TACACATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0156 a0001c0001t0001g0156	1	255	0.0039	30	c.-12 others(45): Show c.-12+466_-12+467insACATATATATATATATATATATATATACAC	CCR3	ENSG00000183625.16	transcript	ENST00000395940.3	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
CCR3_chr3_46237460_46271706	46243002	T T	TATACACA others(23): Show TATACACATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG00558.hp1 HG00597.hp1 others(60): Show HG00544.hp1 HG00558.hp1 HG00597.hp1 HG00609.hp2 HG00642.hp2 HG00673.hp1 HG00738.hp2 HG01123.hp1 HG01255.hp2 HG01515.hp2 HG01516.hp2 HG01891.hp1 HG01952.hp2 HG02015.hp1 HG02056.hp1 HG02080.hp1 HG02080.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02630.hp1 HG02698.hp1 HG02717.hp1 HG02723.hp2 HG02809.hp1 HG03041.hp1 HG03041.hp2 HG03139.hp1 HG03209.hp1 HG03486.hp1 HG03490.hp2 HG03654.hp2 HG03669.hp1 HG03688.hp2 NA18941.hp2 NA18944.hp1 NA18947.hp1 NA18948.hp1 NA18953.hp2 NA18957.hp2 NA18962.hp2 NA18966.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18974.hp2 NA18975.hp2 NA18985.hp2 NA18986.hp2 NA18995.hp2 NA18998.hp2 NA19003.hp1 NA19012.hp2 NA19058.hp1 NA19072.hp2 NA19075.hp1 NA19075.hp2 NA19077.hp2 NA19082.hp1 NA19085.hp2 NA19091.hp1 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 a0001c0001 a0001c0002 a0001c0005	a0001c0001t0001 a0001c0002t0001 a0001c0005t0001 a0001c0001t0001 a0001c0002t0001 a0001c0005t0001	a0001c0001t0001g0002 a0001c0001t0001g0019 a0001c0001t0001g0020 others(32): Show a0001c0001t0001g0002 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0053 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0196 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0002t0001g0186 a0001c0005t0001g0002	63	317	0.1987	30	c.-12 others(45): Show c.-12+465_-12+466insTACACATATATATATATATATATATATACA	CCR3	ENSG00000183625.16	transcript	ENST00000395940.3	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
CCR3_chr3_46237460_46271706	46243002	T T	TATATACA others(23): Show TATATACACATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG03540.hp1 HG02886.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0224 a0001c0001t0001g0225 a0001c0001t0001g0224 a0001c0001t0001g0225	2	256	0.0078	30	c.-12 others(45): Show c.-12+465_-12+466insTATACACATATATATATATATATATATACA	CCR3	ENSG00000183625.16	transcript	ENST00000395940.3	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
CCR6_chr6_167118096_167144141	167130970	G G	GGGCCCCC others(23): Show GGGCCCCCCTCCCTCCGGGACTCCTCCCTCT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG01074.hp2 HG01243.hp1 others(31): Show HG00280.hp1 HG01074.hp2 HG01243.hp1 HG01243.hp2 HG01891.hp1 HG01978.hp2 HG02015.hp1 HG02074.hp2 HG02109.hp2 HG02148.hp1 HG02280.hp1 HG02523.hp2 HG02559.hp2 HG02572.hp2 HG02683.hp2 HG02698.hp2 HG02895.hp1 HG03490.hp2 HG03492.hp1 HG03516.hp2 HG03540.hp2 HG03688.hp1 HG03704.hp2 HG03831.hp2 HG04184.hp2 NA18522.hp2 NA18949.hp2 NA18971.hp2 NA18983.hp1 NA18993.hp1 NA19001.hp2 NA19043.hp1 NA20129.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0011	a0001c0001t0001 a0001c0001t0007 a0001c0001t0012 others(10): Show a0001c0001t0001 a0001c0001t0007 a0001c0001t0012 a0001c0001t0017 a0001c0001t0019 a0001c0002t0002 a0001c0002t0003 a0001c0002t0006 a0001c0002t0010 a0001c0002t0022 a0001c0002t0031 a0001c0003t0004 a0001c0011t0005	a0001c0001t0001g0007 a0001c0001t0001g0273 a0001c0001t0001g0280 others(25): Show a0001c0001t0001g0007 a0001c0001t0001g0273 a0001c0001t0001g0280 a0001c0001t0007g0055 a0001c0001t0007g0056 a0001c0001t0007g0115 a0001c0001t0007g0244 a0001c0001t0012g0111 a0001c0001t0012g0112 a0001c0001t0012g0124 a0001c0001t0012g0227 a0001c0001t0017g0212 a0001c0001t0019g0185 a0001c0002t0002g0005 a0001c0002t0002g0016 a0001c0002t0002g0281 a0001c0002t0003g0002 a0001c0002t0003g0011 a0001c0002t0003g0019 a0001c0002t0003g0058 a0001c0002t0006g0020 a0001c0002t0010g0021 a0001c0002t0010g0035 a0001c0002t0022g0021 a0001c0002t0022g0034 a0001c0002t0031g0226 a0001c0003t0004g0189 a0001c0011t0005g0170	34	408	0.0833	30	c.-97 others(47): Show c.-97-5066_-97-5065insCCCCCCTCCCTCCGGGACTCCTCCCTCT GG	CCR6	ENSG00000112486.18	transcript	ENST00000341935.10	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr6	TogoVar
CCR6_chr6_167118096_167144141	167130973	A A	ACCCCCTC others(23): Show ACCCCCTCCCTCCGGGACTCCTCCCTCTGGG	intron_variant intron_variant	MODIFIER	HG03540.hp1 HG03579.hp1 HG03540.hp1 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0074 a0001c0001t0007g0139 a0001c0001t0007g0074 a0001c0001t0007g0139	2	386	0.0052	30	c.-97 others(47): Show c.-97-5063_-97-5062insCCCTCCCTCCGGGACTCCTCCCTCTGGG CC	CCR6	ENSG00000112486.18	transcript	ENST00000341935.10	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr6	TogoVar
CCR6_chr6_167118096_167144141	167130978	C C	CCTCCCTC others(23): Show CCTCCCTCTGGACCCCCTCCCTCTGGGACCT	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0004	a0001c0003t0004g0214 a0001c0003t0004g0214	1	455	0.0022	30	c.-97 others(47): Show c.-97-5039_-97-5038insCTGGGACCTCTCCCTCTGGACCCCCTCC CT	CCR6	ENSG00000112486.18	transcript	ENST00000341935.10	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr6	TogoVar
CCR8_chr3_39324709_39338680	39337233	C C	CATATATA others(23): Show CATATATATATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00621.hp1 HG02015.hp2 HG02056.hp1 others(18): Show HG00621.hp1 HG02015.hp2 HG02056.hp1 HG02080.hp1 HG02257.hp1 HG02717.hp1 HG02886.hp1 HG03490.hp1 HG03492.hp2 HG04184.hp2 HG06807.hp1 NA18946.hp1 NA18963.hp2 NA18993.hp2 NA19003.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp2 NA19066.hp1 NA19068.hp2 NA19079.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0006 others(5): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0012 a0001c0001t0001g0022 a0001c0001t0001g0026 a0002c0002t0001g0002 a0002c0002t0001g0003	21	54	0.3889	30	c.38 others(41): Show c.3834_*3835insATATATATATATATATATATATATATATAT	CCR8	ENSG00000179934.7	transcript	ENST00000326306.5	protein_coding		3554		chr3	TogoVar
CCSER1_chr4_90122394_91610295	90551706	C C	CTATATAT others(23): Show CTATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02717.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0006 a0002c0002t0001g0006	1	13	0.0769	30	c.172 others(51): Show c.1725-76298_1725-76297insATATATATATATATATATATATAT ATATAT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	5/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	91296483	A A	ATATATAT others(23): Show ATATATATATATATATATATATATATTTATT	intron_variant intron_variant	MODIFIER	HG02897.hp2 HG02897.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0006 a0002c0002t0006	a0002c0002t0006g0025 a0002c0002t0006g0025	1	19	0.0526	30	c.221 others(53): Show c.2217+210492_2217+210493insATATATATATATATATATATAT TTATTTAT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	91411491	C C	CATATATA others(23): Show CATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0007 a0001c0001t0007g0007	1	19	0.0526	30	c.221 others(53): Show c.2218-187075_2218-187046dupTATATATATATATATATATATA TATATATA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER2_chr10_84323589_84523517	84483953	T T	TTATATAT others(23): Show TTATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA18971.hp2 NA18971.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0005 a0002c0002t0005	a0002c0002t0005g0080 a0002c0002t0005g0080	1	41	0.0244	30	c.232 others(49): Show c.2325+6304_2325+6333dupTATATATATATATATATATATATATA TATA	CCSER2	ENSG00000107771.17	transcript	ENST00000372088.8	protein_coding	9/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCSER2_chr10_84323589_84523517	84512405	A A	AGAGAGAG others(23): Show AGAGAGAGAGAGAGGGGGAGGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG01496.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0006 a0002c0003t0006	a0002c0003t0006g0012 a0002c0003t0006g0012	1	248	0.0040	30	c.232 others(49): Show c.2326-1033_2326-1032insAGGGGGAGGAGAGAGAGAGGAGAGAG AGAG	CCSER2	ENSG00000107771.17	transcript	ENST00000372088.8	protein_coding	9/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCZ1B_chr7_6793937_6831275	6825641	C C	CCACACAC others(23): Show CCACACACACACACACACACACACACACACA	intron_variant intron_variant	MODIFIER	NA18970.hp1 NA18970.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0290 a0001c0001t0002g0290	1	131	0.0076	30	c.120 others(45): Show c.120+436_120+437insTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	CCZ1B	ENSG00000146574.16	transcript	ENST00000316731.13	protein_coding	1/14			chr7	TogoVar
CCZ1B_chr7_6793937_6831275	6825661	A A	ACACACAC others(23): Show ACACACACACACACACACACACCCACACACC	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0006 a0003c0004t0006	a0003c0004t0006g0030 a0003c0004t0006g0030	1	349	0.0029	30	c.120 others(45): Show c.120+416_120+417insGGTGTGTGGGTGTGTGTGTGTGTGTGTGTG	CCZ1B	ENSG00000146574.16	transcript	ENST00000316731.13	protein_coding	1/14			chr7	TogoVar
CCZ1B_chr7_6793937_6831275	6830739	C C	CACACACA others(23): Show CACACACACACACACACACACATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0011 a0003c0004t0011	a0003c0004t0011g0102 a0003c0004t0011g0102	1	88	0.0114	30	c.-45 others(41): Show c.-4543_-4542insATATATATATGTGTGTGTGTGTGTGTGTGT	CCZ1B	ENSG00000146574.16	transcript	ENST00000316731.13	protein_coding		4465		chr7	TogoVar
CCZ1B_chr7_6793937_6831275	6830739	C C	CACATATA others(23): Show CACATATATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19072.hp1 NA19072.hp1	a0005 a0005	a0005c0008 a0005c0008	a0005c0008t0006 a0005c0008t0006	a0005c0008t0006g0162 a0005c0008t0006g0162	1	88	0.0114	30	c.-45 others(41): Show c.-4543_-4542insATATATATATATATATATATATATATATGT	CCZ1B	ENSG00000146574.16	transcript	ENST00000316731.13	protein_coding		4465		chr7	TogoVar
CCZ1B_chr7_6793937_6831275	6830739	C C	CATATATA others(23): Show CATATATATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18949.hp1 NA18949.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0003 a0002c0003t0003	a0002c0003t0003g0128 a0002c0003t0003g0128	1	88	0.0114	30	c.-45 others(41): Show c.-4543_-4542insATATATATATATATATATATATATATATAT	CCZ1B	ENSG00000146574.16	transcript	ENST00000316731.13	protein_coding		4465		chr7	TogoVar
CCZ1_chr7_5893733_5931550	5920470	C C	CTTTTTTT others(23): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02056.hp2 HG02056.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0033 a0001c0001t0004g0033	1	13	0.0769	30	c.110 others(47): Show c.1106+521_1106+522insTTTTTTTTTTTTTTTTTTTTTTTTTTTT TT	CCZ1	ENSG00000122674.12	transcript	ENST00000325974.9	protein_coding	12/14		INFO_REALIGN_3_PRIME	chr7	TogoVar
CD109_chr6_73691203_73833313	73780752	C C	CATATAAA others(23): Show CATATAAATATATTTTATGTATATATATAAT	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG01515.hp1 HG01515.hp2 others(3): Show HG00140.hp2 HG01515.hp1 HG01515.hp2 HG02015.hp2 NA18963.hp2 NA19085.hp1	a0002 a0004 a0010 a0002 a0004 a0010	a0002c0002 a0002c0003 a0004c0005 others(1): Show a0002c0002 a0002c0003 a0004c0005 a0010c0016	a0002c0002t0002 a0002c0003t0004 a0004c0005t0007 others(1): Show a0002c0002t0002 a0002c0003t0004 a0004c0005t0007 a0010c0016t0018	a0002c0002t0002g0092 a0002c0003t0004g0057 a0004c0005t0007g0196 others(3): Show a0002c0002t0002g0092 a0002c0003t0004g0057 a0004c0005t0007g0196 a0004c0005t0007g0205 a0010c0016t0018g0041 a0010c0016t0018g0271	6	360	0.0167	30	c.190 others(47): Show c.1902+332_1902+361dupGTATATATATAATATATAAATATATTTT AT	CD109	ENSG00000156535.15	transcript	ENST00000287097.6	protein_coding	16/32		INFO_REALIGN_3_PRIME	chr6	TogoVar

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