Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CDH2_chr18_27945966_28182130	28166149	C C	CATATATA others(23): Show CATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00423.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0009 a0002c0003t0009	a0002c0003t0009g0253 a0002c0003t0009g0253	1	268	0.0037	30	c.60+ others(47): Show c.60+10813_60+10814insATATATATATATATATATATATATATAT AT	CDH2	ENSG00000170558.10	transcript	ENST00000269141.8	protein_coding	1/15			chr18	TogoVar
CDH4_chr20_61247261_61945617	61534665	C C	CTTTTTTT others(23): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02145.hp1 NA19030.hp2 HG02145.hp1 NA19030.hp2	a0001 a0001	a0001c0003 a0001c0007 a0001c0003 a0001c0007	a0001c0003t0037 a0001c0007t0010 a0001c0003t0037 a0001c0007t0010	a0001c0003t0037g0023 a0001c0007t0010g0037 a0001c0003t0037g0023 a0001c0007t0010g0037	2	106	0.0189	30	c.170 others(51): Show c.170-208876_170-208875insTTTTTTTTTTTTTTTTTTTTTTTT TTTTTT	CDH4	ENSG00000179242.16	transcript	ENST00000614565.5	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
CDH4_chr20_61247261_61945617	61565062	T T	TTGGTGGT others(23): Show TTGGTGGTGGTGGTGGTGGTGGTGGTGGTGG	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG02922.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0010 a0001c0007t0010	a0001c0007t0010g0018 a0001c0007t0010g0018	1	106	0.0094	30	c.170 others(51): Show c.170-178475_170-178474insGTGGTGGTGGTGGTGGTGGTGGTG GTGGTG	CDH4	ENSG00000179242.16	transcript	ENST00000614565.5	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
CDH4_chr20_61247261_61945617	61714021	T T	TTTTTATT others(23): Show TTTTTATTTTATTTTATTTTATTTTATTTTA	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03704.hp2 HG03139.hp2 HG03704.hp2	a0001 a0001	a0001c0003 a0001c0021 a0001c0003 a0001c0021	a0001c0003t0017 a0001c0021t0008 a0001c0003t0017 a0001c0021t0008	a0001c0003t0017g0067 a0001c0021t0008g0047 a0001c0003t0017g0067 a0001c0021t0008g0047	2	106	0.0189	30	c.170 others(49): Show c.170-29528_170-29499dupTATTTTATTTTATTTTATTTTATTTT ATTT	CDH4	ENSG00000179242.16	transcript	ENST00000614565.5	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
CDH4_chr20_61247261_61945617	61714023	T T	TTTATGTT others(23): Show TTTATGTTATGTTATGTTATGTTATGTTATG	intron_variant intron_variant	MODIFIER	HG02040.hp2 HG03209.hp1 HG02040.hp2 HG03209.hp1	a0001 a0002 a0001 a0002	a0001c0007 a0002c0024 a0001c0007 a0002c0024	a0001c0007t0046 a0002c0024t0047 a0001c0007t0046 a0002c0024t0047	a0001c0007t0046g0066 a0002c0024t0047g0051 a0001c0007t0046g0066 a0002c0024t0047g0051	2	106	0.0189	30	c.170 others(49): Show c.170-29536_170-29535insGTTATGTTATGTTATGTTATGTTATG TTAT	CDH4	ENSG00000179242.16	transcript	ENST00000614565.5	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
CDH7_chr18_65746012_65895337	65780971	T T	TCTGATGC others(23): Show TCTGATGCTCATTTATTTGCACTAGCTATGG	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0077 a0002c0004t0077	a0002c0004t0077g0100 a0002c0004t0077g0100	1	208	0.0048	30	c.210 others(49): Show c.210+17920_210+17949dupCTGATGCTCATTTATTTGCACTAGCT ATGG	CDH7	ENSG00000081138.14	transcript	ENST00000397968.4	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CDH7_chr18_65746012_65895337	65844174	G G	GATATATA others(23): Show GATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG02451.hp2 HG00280.hp1 HG02451.hp2	a0002 a0002	a0002c0003 a0002c0004 a0002c0003 a0002c0004	a0002c0003t0006 a0002c0004t0080 a0002c0003t0006 a0002c0004t0080	a0002c0003t0006g0141 a0002c0004t0080g0180 a0002c0003t0006g0141 a0002c0004t0080g0180	2	208	0.0096	30	c.123 others(47): Show c.1235+123_1235+124insATATATATATATATATATATATATATAT AT	CDH7	ENSG00000081138.14	transcript	ENST00000397968.4	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CDH7_chr18_65746012_65895337	65844174	G G	GATTTATA others(23): Show GATTTATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03710.hp2 HG03831.hp2 HG03710.hp2 HG03831.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0044 a0002c0002t0097 a0002c0002t0044 a0002c0002t0097	a0002c0002t0044g0038 a0002c0002t0097g0065 a0002c0002t0044g0038 a0002c0002t0097g0065	2	208	0.0096	30	c.123 others(47): Show c.1235+111_1235+112insTTATATATATATATATATATATATATAT AT	CDH7	ENSG00000081138.14	transcript	ENST00000397968.4	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CDH8_chr16_61642250_62041438	61739734	A A	AAAAAGAA others(23): Show AAAAAGAAAAGAAAAGAAAAGAAAAGAAAAG	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01109.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0028 a0001c0002t0028	a0001c0002t0028g0008 a0001c0002t0028g0008	1	168	0.0060	30	c.141 others(51): Show c.1415-12520_1415-12519insCTTTTCTTTTCTTTTCTTTTCTTT TCTTTT	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	8/11			chr16	TogoVar
CDH8_chr16_61642250_62041438	61768367	T T	TCTCTCTC others(23): Show TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCC	intron_variant intron_variant	MODIFIER	HG03486.hp1 NA19058.hp1 HG03486.hp1 NA19058.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0030 a0001c0001t0005 a0001c0001t0030	a0001c0001t0005g0059 a0001c0001t0030g0003 a0001c0001t0005g0059 a0001c0001t0030g0003	2	168	0.0119	30	c.141 others(51): Show c.1414+20978_1414+20979insGGAGAGAGAGAGAGAGAGAGAGAG AGAGAG	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	8/11			chr16	TogoVar
CDH8_chr16_61642250_62041438	61953895	T T	TTATATAT others(23): Show TTATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0032 a0001c0001t0032	a0001c0001t0032g0014 a0001c0001t0032g0014	1	168	0.0060	30	c.253 others(49): Show c.253-52452_253-52423dupTATATATATATATATATATATATATA TATA	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	2/11			chr16	TogoVar
CDH8_chr16_61642250_62041438	61960089	G G	GTGTGTGT others(23): Show GTGTGTGTGTATACACATACATATATACATA	intron_variant intron_variant	MODIFIER	HG02109.hp2 NA18980.hp2 NA19007.hp1 HG02109.hp2 NA18980.hp2 NA19007.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0043 a0001c0002t0004 a0001c0002t0075 a0001c0001t0043 a0001c0002t0004 a0001c0002t0075	a0001c0001t0043g0110 a0001c0002t0004g0140 a0001c0002t0075g0099 a0001c0001t0043g0110 a0001c0002t0004g0140 a0001c0002t0075g0099	3	168	0.0179	30	c.253 others(49): Show c.253-58646_253-58617dupTATGTATATATGTATGTGTATACACA CACA	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	2/11			chr16	TogoVar
CDH8_chr16_61642250_62041438	61960121	G G	GTGTGTGT others(23): Show GTGTGTGTGTATACACATACATATATACATA	intron_variant intron_variant	MODIFIER	HG01071.hp1 HG01496.hp2 NA19002.hp2 HG01071.hp1 HG01496.hp2 NA19002.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0050 a0001c0001t0072 a0001c0001t0011 a0001c0001t0050 a0001c0001t0072	a0001c0001t0011g0125 a0001c0001t0050g0127 a0001c0001t0072g0060 a0001c0001t0011g0125 a0001c0001t0050g0127 a0001c0001t0072g0060	3	168	0.0179	30	c.253 others(49): Show c.253-58678_253-58649dupTATGTATATATGTATGTGTATACACA CACA	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	2/11			chr16	TogoVar
CDH8_chr16_61642250_62041438	61960153	G G	GTGTGTGT others(23): Show GTGTGTGTGTATACACATACATATATACATA	intron_variant intron_variant	MODIFIER	NA18978.hp1 NA18978.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0037 a0001c0001t0001g0037	1	168	0.0060	30	c.253 others(49): Show c.253-58710_253-58681dupTATGTATATATGTATGTGTATACACA CACA	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	2/11			chr16	TogoVar
CDH8_chr16_61642250_62041438	61960284	C C	CACATATA others(23): Show CACATATATACATGTGTGTGTGTATACACAT	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0076 a0001c0001t0001g0076	1	168	0.0060	30	c.253 others(49): Show c.253-58812_253-58811insATGTGTATACACACACACATGTATAT ATGT	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	2/11			chr16	TogoVar
CDH8_chr16_61642250_62041438	61960310	C C	CATACATA others(23): Show CATACATATATACATGTGTGTGTATACACAT	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0068 a0001c0001t0068	a0001c0001t0068g0080 a0001c0001t0068g0080	1	168	0.0060	30	c.253 others(49): Show c.253-58838_253-58837insATGTGTATACACACACATGTATATAT GTAT	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	2/11			chr16	TogoVar
CDH8_chr16_61642250_62041438	61960336	C C	CACATATA others(23): Show CACATATATACATGTGTGTGTGTATACACAT	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0047 a0001c0001t0047	a0001c0001t0047g0077 a0001c0001t0047g0077	1	168	0.0060	30	c.253 others(49): Show c.253-58893_253-58864dupATGTGTATACACACACACATGTATAT ATGT	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	2/11			chr16	TogoVar
CDH8_chr16_61642250_62041438	61960336	C C	CATACATA others(23): Show CATACATATATACATGTGTGTGTATACACAT	intron_variant intron_variant	MODIFIER	HG01943.hp2 NA18964.hp2 NA18966.hp2 HG01943.hp2 NA18964.hp2 NA18966.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0002 a0001c0003t0002 a0001c0001t0002 a0001c0003t0002	a0001c0001t0002g0025 a0001c0003t0002g0143 a0001c0003t0002g0144 a0001c0001t0002g0025 a0001c0003t0002g0143 a0001c0003t0002g0144	3	168	0.0179	30	c.253 others(49): Show c.253-58864_253-58863insATGTGTATACACACACATGTATATAT GTAT	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	2/11			chr16	TogoVar
CDH8_chr16_61642250_62041438	61960377	A A	ATGTGTGT others(23): Show ATGTGTGTGTATACACATACATATATACATG	intron_variant intron_variant	MODIFIER	HG02572.hp1 NA19058.hp1 HG02572.hp1 NA19058.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0048 a0001c0001t0005 a0001c0001t0048	a0001c0001t0005g0059 a0001c0001t0048g0044 a0001c0001t0005g0059 a0001c0001t0048g0044	2	168	0.0119	30	c.253 others(49): Show c.253-58905_253-58904insCATGTATATATGTATGTGTATACACA CACA	CDH8	ENSG00000150394.14	transcript	ENST00000577390.6	protein_coding	2/11			chr16	TogoVar
CDHR5_chr11_611583_629955	613610	A A	AGCTGTGA others(23): Show AGCTGTGAGTGACGGGGGTGGGCGGGGACAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0002 a0002c0002t0001g0002	1	409	0.0024	30	c.37 others(41): Show c.3711_*3740dupCTGTCCCCGCCCACCCCCGTCACTCACAGC	CDHR5	ENSG00000099834.19	transcript	ENST00000397542.7	protein_coding		2972		chr11	TogoVar
CDHR5_chr11_611583_629955	627743	C C	CCGTTCAC others(23): Show CCGTTCACAGACGCTCCCGTCCTCCCAAAAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02080.hp1 HG02559.hp2 HG03471.hp1 others(1): Show HG02080.hp1 HG02559.hp2 HG03471.hp1 NA18522.hp2	a0010 a0025 a0010 a0025	a0010c0017 a0025c0051 a0010c0017 a0025c0051	a0010c0017t0001 a0025c0051t0001 a0010c0017t0001 a0025c0051t0001	a0010c0017t0001g0045 a0010c0017t0001g0131 a0025c0051t0001g0120 a0010c0017t0001g0045 a0010c0017t0001g0131 a0025c0051t0001g0120	4	409	0.0098	30	c.-28 others(41): Show c.-2842_-2841insATTTTGGGAGGACGGGAGCGTCTGTGAACG	CDHR5	ENSG00000099834.19	transcript	ENST00000397542.7	protein_coding		2789		chr11	TogoVar
CDIN1_chr15_36574626_36815244	36703269	T T	TGATAGAT others(23): Show TGATAGATCTATCAGATATATACATATATCA	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01192.hp2 HG01243.hp1 others(3): Show HG00738.hp2 HG01192.hp2 HG01243.hp1 HG02723.hp1 HG02896.hp2 HG02897.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0002c0002t0003 a0002c0002t0004 others(1): Show a0001c0001t0002 a0002c0002t0003 a0002c0002t0004 a0002c0002t0017	a0001c0001t0002g0068 a0001c0001t0002g0069 a0002c0002t0003g0061 others(3): Show a0001c0001t0002g0068 a0001c0001t0002g0069 a0002c0002t0003g0061 a0002c0002t0004g0106 a0002c0002t0004g0107 a0002c0002t0017g0078	6	238	0.0252	30	c.545 others(47): Show c.545-5880_545-5851dupGATATATACATATATCAGATAGATCTAT CA	CDIN1	ENSG00000186073.14	transcript	ENST00000566621.6	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr15	TogoVar
CDK12_chr17_39456486_39539544	39476711	C C	CTTTTTTT others(23): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG02976.hp2 HG01496.hp1 HG02976.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0005 a0001c0001t0004 a0001c0001t0005	a0001c0001t0004g0017 a0001c0001t0005g0024 a0001c0001t0004g0017 a0001c0001t0005g0024	2	260	0.0077	30	c.193 others(49): Show c.1931+4977_1931+4978insTTTTTTTTTTTTTTTTTTTTTTTTTT TTTT	CDK12	ENSG00000167258.16	transcript	ENST00000447079.6	protein_coding	2/13		INFO_REALIGN_3_PRIME	chr17	TogoVar
CDK12_chr17_39456486_39539544	39532102	T T	TTCTCTCT others(23): Show TTCTCTCTCTCTCTATCTCTCTCTCTCTCTC	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02809.hp2 HG02809.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0036 a0001c0001t0036	a0001c0001t0036g0092 a0001c0001t0036g0092	1	260	0.0039	30	c.79 others(39): Show c.799_*800insATCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CDK12	ENSG00000167258.16	transcript	ENST00000447079.6	protein_coding	14/14	800	INFO_REALIGN_3_PRIME	chr17	TogoVar
CDK13_chr7_39945256_40104580	39976323	T T	TCTCTCTC others(23): Show TCTCTCTCACACACACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG01943.hp2 HG01943.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0005 a0001c0001t0008g0005	1	322	0.0031	30	c.121 others(51): Show c.1212-11275_1212-11274insTCTCTCACACACACACACACACAC ACACAC	CDK13	ENSG00000065883.18	transcript	ENST00000181839.10	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr7	TogoVar
CDK13_chr7_39945256_40104580	39976323	T T	TCTCTCTC others(23): Show TCTCTCTCTCACACACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02895.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0007 a0001c0001t0006g0007	1	322	0.0031	30	c.121 others(51): Show c.1212-11275_1212-11274insTCTCTCTCACACACACACACACAC ACACAC	CDK13	ENSG00000065883.18	transcript	ENST00000181839.10	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr7	TogoVar
CDK13_chr7_39945256_40104580	39976323	T T	TCTCTCTC others(23): Show TCTCTCTCTCTCTCACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG01515.hp1 HG01515.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0013 a0001c0001t0006g0013	1	322	0.0031	30	c.121 others(51): Show c.1212-11275_1212-11274insTCTCTCTCTCTCACACACACACAC ACACAC	CDK13	ENSG00000065883.18	transcript	ENST00000181839.10	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr7	TogoVar
CDK13_chr7_39945256_40104580	39976323	T T	TCTCTCTC others(23): Show TCTCTCTCTCTCTCTCTCTCTCACACACACA	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0171 a0001c0001t0001g0171	1	322	0.0031	30	c.121 others(51): Show c.1212-11275_1212-11274insTCTCTCTCTCTCTCTCTCTCACAC ACACAC	CDK13	ENSG00000065883.18	transcript	ENST00000181839.10	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr7	TogoVar
CDK13_chr7_39945256_40104580	39976323	T T	TCTCTCTC others(23): Show TCTCTCTCTCTCTCTCTCTCTCTCTCACACA	intron_variant intron_variant	MODIFIER	NA18981.hp2 NA18981.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0114 a0001c0001t0001g0114	1	322	0.0031	30	c.121 others(51): Show c.1212-11275_1212-11274insTCTCTCTCTCTCTCTCTCTCTCTC ACACAC	CDK13	ENSG00000065883.18	transcript	ENST00000181839.10	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr7	TogoVar
CDK13_chr7_39945256_40104580	39976323	T T	TCTCTCTC others(23): Show TCTCTCTCTCTCTCTCTCTCTCTCTCTCACA	intron_variant intron_variant	MODIFIER	NA18942.hp2 NA19055.hp1 NA18942.hp2 NA19055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0100 a0001c0001t0003g0132 a0001c0001t0003g0100 a0001c0001t0003g0132	2	322	0.0062	30	c.121 others(51): Show c.1212-11275_1212-11274insTCTCTCTCTCTCTCTCTCTCTCTC TCACAC	CDK13	ENSG00000065883.18	transcript	ENST00000181839.10	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr7	TogoVar
CDK13_chr7_39945256_40104580	39976323	T T	TCTCTCTC others(23): Show TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCA	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00423.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0118 a0001c0001t0003g0118	1	322	0.0031	30	c.121 others(51): Show c.1212-11275_1212-11274insTCTCTCTCTCTCTCTCTCTCTCTC TCTCAC	CDK13	ENSG00000065883.18	transcript	ENST00000181839.10	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr7	TogoVar
CDK14_chr7_90591321_91215590	90895374	C C	CCCTCCCC others(23): Show CCCTCCCCTCCCCTCCCCTCCCCTCCCCTCT	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0039 a0001c0001t0005g0039	1	168	0.0060	30	c.640 others(47): Show c.640-3913_640-3912insCCCTCCCCTCCCCTCCCCTCCCCTCTCC TC	CDK14	ENSG00000058091.17	transcript	ENST00000380050.8	protein_coding	6/14		INFO_REALIGN_3_PRIME	chr7	TogoVar
CDK14_chr7_90591321_91215590	90895504	T T	TCCTCCCT others(23): Show TCCTCCCTTCCCCTCCCTTCCCCTCCCTTCC	intron_variant intron_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0040 a0001c0001t0006g0040	1	168	0.0060	30	c.640 others(47): Show c.640-3770_640-3741dupTTCCCCTCCCTTCCCCTCCCTTCCCCTC CC	CDK14	ENSG00000058091.17	transcript	ENST00000380050.8	protein_coding	6/14		INFO_REALIGN_3_PRIME	chr7	TogoVar
CDK14_chr7_90591321_91215590	90981803	G G	GAAACAAA others(23): Show GAAACAAAACAAAACAAAACAAAACAAAACA	intron_variant intron_variant	MODIFIER	HG02132.hp1 HG02257.hp1 HG02258.hp2 others(4): Show HG02132.hp1 HG02257.hp1 HG02258.hp2 HG03486.hp1 HG03834.hp1 NA18957.hp2 NA19003.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0002t0001 a0001c0002t0021	a0001c0001t0001g0050 a0001c0001t0002g0082 a0001c0001t0003g0051 others(4): Show a0001c0001t0001g0050 a0001c0001t0002g0082 a0001c0001t0003g0051 a0001c0001t0004g0084 a0001c0001t0006g0107 a0001c0002t0001g0024 a0001c0002t0021g0108	7	168	0.0417	30	c.948 others(47): Show c.948-2344_948-2315dupAAACAAAACAAAACAAAACAAAACAAAA CA	CDK14	ENSG00000058091.17	transcript	ENST00000380050.8	protein_coding	9/14		INFO_REALIGN_3_PRIME	chr7	TogoVar
CDK14_chr7_90591321_91215590	91091501	T T	TTATATAT others(23): Show TTATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0091 a0001c0001t0001g0091	1	168	0.0060	30	c.115 others(51): Show c.1154+12037_1154+12038insTATATATATATATATATATATATA TATATA	CDK14	ENSG00000058091.17	transcript	ENST00000380050.8	protein_coding	12/14		INFO_REALIGN_3_PRIME	chr7	TogoVar
CDK14_chr7_90591321_91215590	91211567	T T	TAAAAAAA others(23): Show TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03942.hp1 HG03942.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0080 a0001c0001t0005g0080	1	168	0.0060	30	c.44 others(41): Show c.4431_*4432insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	CDK14	ENSG00000058091.17	transcript	ENST00000380050.8	protein_coding		978		chr7	TogoVar
CDK15_chr2_201801537_201900550	201857232	C C	CAAAAAAA others(23): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18952.hp1 NA18978.hp1 NA18984.hp2 others(1): Show NA18952.hp1 NA18978.hp1 NA18984.hp2 NA19079.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0016 a0001c0001t0001 a0001c0001t0004 a0001c0001t0016	a0001c0001t0001g0169 a0001c0001t0001g0176 a0001c0001t0004g0284 others(1): Show a0001c0001t0001g0169 a0001c0001t0001g0176 a0001c0001t0004g0284 a0001c0001t0016g0153	4	322	0.0124	30	c.100 others(49): Show c.1009+2311_1009+2312insAAAAAAAAAAAAAAAAAAAAAAAAAA AAAA	CDK15	ENSG00000138395.17	transcript	ENST00000652192.3	protein_coding	10/13		INFO_REALIGN_3_PRIME	chr2	TogoVar
CDK18_chr1_205499669_205537790	205532933	G G	GTATATAT others(23): Show GTATATATATATATATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18944.hp1 NA18944.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0294 a0001c0001t0003g0294	1	388	0.0026	30	c.15 others(41): Show c.1555_*1556insTATATATATATATATATATATATATATATA	CDK18	ENSG00000117266.16	transcript	ENST00000429964.7	protein_coding		144		chr1	TogoVar
CDK18_chr1_205499669_205537790	205532937	G G	GTGTGTAT others(23): Show GTGTGTATGTGTGTGTGTGTGTGTGTGTATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0106 a0001c0001t0018g0106	1	388	0.0026	30	c.15 others(41): Show c.1559_*1560insTGTGTATGTGTGTGTGTGTGTGTGTGTATA	CDK18	ENSG00000117266.16	transcript	ENST00000429964.7	protein_coding		148		chr1	TogoVar
CDK18_chr1_205499669_205537790	205532937	G G	GTGTGTGT others(23): Show GTGTGTGTGTGTGTATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp1 HG01243.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0008 a0002c0002t0008	a0002c0002t0008g0151 a0002c0002t0008g0151	1	388	0.0026	30	c.15 others(41): Show c.1559_*1560insTGTGTGTGTGTGTATATATATATATATATA	CDK18	ENSG00000117266.16	transcript	ENST00000429964.7	protein_coding		148		chr1	TogoVar
CDK18_chr1_205499669_205537790	205532937	G G	GTGTGTGT others(23): Show GTGTGTGTGTGTGTGTGTATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0153 a0001c0001t0010g0153	1	388	0.0026	30	c.15 others(41): Show c.1559_*1560insTGTGTGTGTGTGTGTGTATATATATATATA	CDK18	ENSG00000117266.16	transcript	ENST00000429964.7	protein_coding		148		chr1	TogoVar
CDK19_chr6_110604978_110820469	110734520	G G	GCTCGCTC others(23): Show GCTCGCTCTCTCTCTCTCTCTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG00609.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0122 a0001c0001t0002g0122	1	300	0.0033	30	c.204 others(49): Show c.204+11605_204+11606insAGAGAGAGAGAGAGAGAGAGAGAGAG CGAG	CDK19	ENSG00000155111.15	transcript	ENST00000368911.8	protein_coding	2/12			chr6	TogoVar
CDK19_chr6_110604978_110820469	110734520	G G	GCTCTCTC others(23): Show GCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01081.hp2 HG02896.hp1 others(3): Show HG00741.hp1 HG01081.hp2 HG02896.hp1 HG03139.hp1 HG03710.hp2 HG04204.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 others(1): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0041	a0001c0001t0002g0060 a0001c0001t0002g0104 a0001c0001t0002g0106 others(3): Show a0001c0001t0002g0060 a0001c0001t0002g0104 a0001c0001t0002g0106 a0001c0001t0004g0092 a0001c0001t0005g0003 a0001c0001t0041g0300	6	300	0.0200	30	c.204 others(49): Show c.204+11576_204+11605dupAGAGAGAGAGAGAGAGAGAGAGAGAG AGAG	CDK19	ENSG00000155111.15	transcript	ENST00000368911.8	protein_coding	2/12			chr6	TogoVar
CDK5R2_chr2_218954666_218967155	218962924	T T	TTCAACAG others(23): Show TTCAACAGAGTGCCCGCGGCTCCGACCCTAG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	388	0.0026	30	c.20 others(41): Show c.2000_*2001insTCAACAGAGTGCCCGCGGCTCCGACCCTAG	CDK5R2	ENSG00000171450.6	transcript	ENST00000302625.6	protein_coding		770		chr2	TogoVar
CDK5R2_chr2_218954666_218967155	218966479	A A	AAAAAAAA others(23): Show AAAAAAAAAAAAAAAAAATATATATATGTAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18954.hp1 NA18954.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0000 a0001c0002t0002g0000	1	388	0.0026	30	c.55 others(41): Show c.5555_*5556insAAAAAAAAAAAAAAAAATATATATATGTAT	CDK5R2	ENSG00000171450.6	transcript	ENST00000302625.6	protein_coding		4325		chr2	TogoVar
CDK5R2_chr2_218954666_218967155	218966479	A A	AAAAAAAA others(23): Show AAAAAAAATATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02155.hp1 HG02155.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	388	0.0026	30	c.55 others(41): Show c.5555_*5556insAAAAAAATATATATATATATATATATATAT	CDK5R2	ENSG00000171450.6	transcript	ENST00000302625.6	protein_coding		4325		chr2	TogoVar
CDK5R2_chr2_218954666_218967155	218966503	T T	TATATATA others(23): Show TATATATATATATATATATACACACACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp1 NA18991.hp2 HG01433.hp1 NA18991.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0000 a0001c0002t0002g0000	2	388	0.0052	30	c.55 others(41): Show c.5579_*5580insATATATATATATATATATACACACACACAC	CDK5R2	ENSG00000171450.6	transcript	ENST00000302625.6	protein_coding		4349		chr2	TogoVar
CDK6_chr7_92599921_92841573	92778946	T T	TATATATA others(23): Show TATATATATATATATATATATATATATATAA	intron_variant intron_variant	MODIFIER	HG03225.hp1 NA18950.hp2 NA20905.hp2 HG03225.hp1 NA18950.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0035 a0001c0001t0002 a0001c0001t0004 a0001c0001t0035	a0001c0001t0002g0118 a0001c0001t0004g0045 a0001c0001t0035g0040 a0001c0001t0002g0118 a0001c0001t0004g0045 a0001c0001t0035g0040	3	124	0.0242	30	c.234 others(47): Show c.234-4116_234-4115insTTATATATATATATATATATATATATAT AT	CDK6	ENSG00000105810.10	transcript	ENST00000424848.3	protein_coding	2/7			chr7	TogoVar
CDK6_chr7_92599921_92841573	92840593	A A	AGGCAACC others(23): Show AGGCAACCCGATTCTTTCAGGATGAATGGCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00639.hp2 HG00639.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0031 a0001c0001t0031	a0001c0001t0031g0092 a0001c0001t0031g0092	1	124	0.0081	30	c.-44 others(41): Show c.-4484_-4483insGGCCATTCATCCTGAAAGAATCGGGTTGCC	CDK6	ENSG00000105810.10	transcript	ENST00000424848.3	protein_coding		4021		chr7	TogoVar
CDKAL1_chr6_20529457_21237404	20600771	C C	CATATATA others(23): Show CATATATATATATATATATATACACATATAT	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG01943.hp1 HG02055.hp1 others(9): Show HG01192.hp2 HG01943.hp1 HG02055.hp1 HG02257.hp1 HG02559.hp1 HG02630.hp1 HG02723.hp1 HG02897.hp2 HG03453.hp1 HG03471.hp2 HG03579.hp1 NA18978.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0001c0002 a0001c0008 others(2): Show a0001c0001 a0001c0002 a0001c0008 a0001c0010 a0004c0016	a0001c0001t0001 a0001c0001t0015 a0001c0001t0027 others(8): Show a0001c0001t0001 a0001c0001t0015 a0001c0001t0027 a0001c0001t0032 a0001c0002t0002 a0001c0002t0003 a0001c0002t0007 a0001c0002t0043 a0001c0008t0011 a0001c0010t0017 a0004c0016t0001	a0001c0001t0001g0188 a0001c0001t0015g0186 a0001c0001t0015g0191 others(9): Show a0001c0001t0001g0188 a0001c0001t0015g0186 a0001c0001t0015g0191 a0001c0001t0027g0180 a0001c0001t0032g0196 a0001c0002t0002g0195 a0001c0002t0003g0184 a0001c0002t0007g0187 a0001c0002t0043g0190 a0001c0008t0011g0181 a0001c0010t0017g0194 a0004c0016t0001g0185	12	196	0.0612	30	c.287 others(49): Show c.287-48505_287-48504insTATACACATATATATATATATATATA TATA	CDKAL1	ENSG00000145996.11	transcript	ENST00000274695.8	protein_coding	4/15		INFO_REALIGN_3_PRIME	chr6	TogoVar

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