Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
GPALPP1_chr13_44984538_45035305	44995169	A A	AACACACA others(23): Show AACACACACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01192.hp1 HG02135.hp2 others(5): Show HG01109.hp1 HG01192.hp1 HG02135.hp2 HG02818.hp2 NA18985.hp1 NA19065.hp1 NA19077.hp2 NA19089.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006	a0001c0001t0003g0251 a0001c0001t0003g0252 a0001c0001t0003g0253 others(5): Show a0001c0001t0003g0251 a0001c0001t0003g0252 a0001c0001t0003g0253 a0001c0001t0004g0261 a0001c0001t0004g0275 a0001c0001t0004g0276 a0001c0001t0006g0262 a0001c0001t0006g0277	8	348	0.0230	30	c.88+ others(45): Show c.88+5432_88+5461dupACACACACACACACACACACACACACACAC	GPALPP1	ENSG00000133114.18	transcript	ENST00000379151.9	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPAT2_chr2_96016946_96039916	96029482	C C	CATACAGA others(23): Show CATACAGATGGTGTTTAAAGCAACCCGGAGA	intron_variant intron_variant	MODIFIER	NA18946.hp1 NA18946.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0043 a0001c0001t0001g0043	1	422	0.0024	30	c.485 others(45): Show c.485+923_485+924insTCTCCGGGTTGCTTTAAACACCATCTGTAT	GPAT2	ENSG00000186281.13	transcript	ENST00000434632.6	protein_coding	6/21			chr2	TogoVar
GPAT3_chr4_83531108_83610875	83562181	A A	ATATATAT others(23): Show ATATATATATATATATATAATATATATATAT	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01884.hp2 HG02895.hp1 others(2): Show HG01081.hp1 HG01884.hp2 HG02895.hp1 HG03516.hp1 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0069 a0001c0001t0001g0118 a0001c0001t0001g0119 others(2): Show a0001c0001t0001g0069 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0125	5	334	0.0150	30	c.208 others(49): Show c.208+17594_208+17623dupTATAATATATATATATTATATATATA TATA	GPAT3	ENSG00000138678.11	transcript	ENST00000264409.5	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr4	TogoVar
GPATCH8_chr17_44390281_44508406	44453494	G G	GGTGTGTG others(23): Show GGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02300.hp1 HG02300.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0288 a0001c0002t0001g0288	1	326	0.0031	30	c.193 others(49): Show c.193+10977_193+10978insACACACACACACACACACACACACAC ACAC	GPATCH8	ENSG00000186566.13	transcript	ENST00000591680.6	protein_coding	3/7			chr17	TogoVar
GPATCH8_chr17_44390281_44508406	44453500	G G	GGTGTGTG others(23): Show GGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	326	0.0031	30	c.193 others(49): Show c.193+10942_193+10971dupACACACACACACACACACACACACAC ACAC	GPATCH8	ENSG00000186566.13	transcript	ENST00000591680.6	protein_coding	3/7			chr17	TogoVar
GPATCH8_chr17_44390281_44508406	44483176	A A	AAAAAAAA others(23): Show AAAAAAAAAAAAAAAAAAAAAATATATATAT	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0071 a0001c0001t0001g0071	1	326	0.0031	30	c.46- others(45): Show c.46-8274_46-8273insATATATATATTTTTTTTTTTTTTTTTTTTT	GPATCH8	ENSG00000186566.13	transcript	ENST00000591680.6	protein_coding	1/7			chr17	TogoVar
GPATCH8_chr17_44390281_44508406	44483176	A A	AAAAAAAA others(23): Show AAAAAAAAAAAAAAAATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18957.hp1 NA18957.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0174 a0001c0003t0001g0174	1	326	0.0031	30	c.46- others(45): Show c.46-8274_46-8273insATATATATATATATATTTTTTTTTTTTTTT	GPATCH8	ENSG00000186566.13	transcript	ENST00000591680.6	protein_coding	1/7			chr17	TogoVar
GPATCH8_chr17_44390281_44508406	44483176	A A	AAAAAAAA others(23): Show AAAAAAAAAAAAAATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18992.hp2 NA19030.hp2 NA18992.hp2 NA19030.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0303 a0001c0002t0001g0307 a0001c0002t0001g0303 a0001c0002t0001g0307	2	326	0.0061	30	c.46- others(45): Show c.46-8274_46-8273insATATATATATATATATATTTTTTTTTTTTT	GPATCH8	ENSG00000186566.13	transcript	ENST00000591680.6	protein_coding	1/7			chr17	TogoVar
GPATCH8_chr17_44390281_44508406	44483176	A A	AAAAAAAA others(23): Show AAAAAAAAAAAATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19087.hp2 NA19087.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0166 a0001c0003t0001g0166	1	326	0.0031	30	c.46- others(45): Show c.46-8274_46-8273insATATATATATATATATATATTTTTTTTTTT	GPATCH8	ENSG00000186566.13	transcript	ENST00000591680.6	protein_coding	1/7			chr17	TogoVar
GPBP1_chr5_57169059_57269673	57229941	G G	GCGTCCCG others(23): Show GCGTCCCGTCCCGTCCCGTCCCGTCCCGTCC	intron_variant intron_variant	MODIFIER	HG03710.hp1 HG03710.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0012 a0001c0001t0016g0012	1	290	0.0035	30	c.64- others(43): Show c.64-903_64-874dupGTCCCGTCCCGTCCCGTCCCGTCCCGTCCC	GPBP1	ENSG00000062194.16	transcript	ENST00000506184.7	protein_coding	3/11		INFO_REALIGN_3_PRIME	chr5	TogoVar
GPBP1_chr5_57169059_57269673	57249784	C C	CTCTCCCC others(23): Show CTCTCCCCTTCCCCTCCTTCACCCCTCCCCA	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0017 a0001c0007t0017	a0001c0007t0017g0108 a0001c0007t0017g0108	1	290	0.0035	30	c.972 others(45): Show c.972+210_972+211insTCCCCTTCCCCTCCTTCACCCCTCCCCATC	GPBP1	ENSG00000062194.16	transcript	ENST00000506184.7	protein_coding	9/11		INFO_REALIGN_3_PRIME	chr5	TogoVar
GPC3_chrX_133530745_133990594	133842362	A A	ATATATTA others(23): Show ATATATTATATTATATTATATTATATTATAT	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG03130.hp1 HG02922.hp2 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0008 a0001c0002t0002 a0001c0001t0008 a0001c0002t0002	a0001c0001t0008g0067 a0001c0002t0002g0063 a0001c0001t0008g0067 a0001c0002t0002g0063	2	152	0.0132	30	c.338 others(49): Show c.338-88187_338-88186insATATAATATAATATAATATAATATAA TATA	GPC3	ENSG00000147257.16	transcript	ENST00000370818.8	protein_coding	2/7			chrX	TogoVar
GPC5_chr13_91393621_92872237	91791599	T T	TTTACATC others(23): Show TTTACATCAACAATTACATGTTGATGTTTAA	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02809.hp1 HG02280.hp2 HG02809.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0004 a0002c0002t0001 a0002c0002t0004	a0002c0002t0001g0008 a0002c0002t0004g0026 a0002c0002t0001g0008 a0002c0002t0004g0026	2	42	0.0476	30	c.128 others(51): Show c.1280+35224_1280+35253dupACATGTTGATGTTTAATTACATCA ACAATT	GPC5	ENSG00000179399.16	transcript	ENST00000377067.9	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC5_chr13_91393621_92872237	92421698	C C	CAAAAAAA others(23): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0036 a0001c0001t0002g0036	1	42	0.0238	30	c.156 others(53): Show c.1561+276731_1561+276732insAAAAAAAAAAAAAAAAAAAAAA AAAAAAAA	GPC5	ENSG00000179399.16	transcript	ENST00000377067.9	protein_coding	7/7		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC5_chr13_91393621_92872237	92840092	T T	TATATATA others(23): Show TATATATATACATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02280.hp1 HG03579.hp1 HG01109.hp1 HG02280.hp1 HG03579.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0002c0002t0002 a0001c0001t0001 a0001c0001t0002 a0002c0002t0002	a0001c0001t0001g0032 a0001c0001t0002g0040 a0002c0002t0002g0015 a0001c0001t0001g0032 a0001c0001t0002g0040 a0002c0002t0002g0015	3	42	0.0714	30	c.156 others(51): Show c.1562-26181_1562-26180insCATATATATATATATATATACATA TATATA	GPC5	ENSG00000179399.16	transcript	ENST00000377067.9	protein_coding	7/7		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC6_chr13_93221807_94413020	93418407	T T	TTTTATTA others(23): Show TTTTATTAATAGCACTATACCATAGTATTGC	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01884.hp1 HG02451.hp1 others(3): Show HG01243.hp1 HG01884.hp1 HG02451.hp1 HG02615.hp1 HG02886.hp2 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0009 a0001c0001t0013 others(3): Show a0001c0001t0007 a0001c0001t0009 a0001c0001t0013 a0001c0001t0016 a0001c0001t0019 a0001c0001t0035	a0001c0001t0007g0020 a0001c0001t0009g0016 a0001c0001t0013g0030 others(3): Show a0001c0001t0007g0020 a0001c0001t0009g0016 a0001c0001t0013g0030 a0001c0001t0016g0018 a0001c0001t0019g0074 a0001c0001t0035g0073	6	76	0.0790	30	c.161 others(51): Show c.161-126828_161-126827insGCTTTATTAATAGCACTATACCAT AGTATT	GPC6	ENSG00000183098.12	transcript	ENST00000377047.9	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC6_chr13_93221807_94413020	93418729	T T	TGTCATTT others(23): Show TGTCATTTTATTAATGGCACTATACCGTAGC	intron_variant intron_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0035 a0001c0001t0016g0035	1	76	0.0132	30	c.161 others(51): Show c.161-126533_161-126504dupGTCATTTTATTAATGGCACTATAC CGTAGC	GPC6	ENSG00000183098.12	transcript	ENST00000377047.9	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC6_chr13_93221807_94413020	93561404	G G	GAGATATA others(23): Show GAGATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0070 a0001c0001t0004g0070	1	76	0.0132	30	c.319 others(49): Show c.319+15984_319+15985insGATATATATATATATATATATATATA TATA	GPC6	ENSG00000183098.12	transcript	ENST00000377047.9	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC6_chr13_93221807_94413020	93561404	G G	GATATATA others(23): Show GATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG03041.hp2 HG02895.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0020 a0001c0001t0015 a0001c0001t0020	a0001c0001t0015g0048 a0001c0001t0020g0061 a0001c0001t0015g0048 a0001c0001t0020g0061	2	76	0.0263	30	c.319 others(49): Show c.319+16005_319+16006insATATATATATATATATATATATATAT ATAT	GPC6	ENSG00000183098.12	transcript	ENST00000377047.9	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC6_chr13_93221807_94413020	93667743	T T	TTTTTTTT others(23): Show TTTTTTTTTTTTTTTTCCTGTCAAATTTGTA	intron_variant intron_variant	MODIFIER	HG01975.hp1 HG01981.hp1 HG02451.hp1 others(7): Show HG01975.hp1 HG01981.hp1 HG02451.hp1 HG02886.hp2 HG02895.hp2 HG03041.hp1 HG03098.hp1 HG03225.hp1 HG03579.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0005 a0001c0001t0008 others(7): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0008 a0001c0001t0013 a0001c0001t0015 a0001c0001t0019 a0001c0001t0031 a0001c0001t0032 a0001c0001t0036 a0001c0003t0014	a0001c0001t0001g0026 a0001c0001t0005g0062 a0001c0001t0008g0060 others(7): Show a0001c0001t0001g0026 a0001c0001t0005g0062 a0001c0001t0008g0060 a0001c0001t0013g0030 a0001c0001t0015g0048 a0001c0001t0019g0074 a0001c0001t0031g0031 a0001c0001t0032g0027 a0001c0001t0036g0001 a0001c0003t0014g0021	10	76	0.1316	30	c.319 others(51): Show c.319+122327_319+122328insTTTTTTTTTTCCTGTCAAATTTGT ATTTTT	GPC6	ENSG00000183098.12	transcript	ENST00000377047.9	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC6_chr13_93221807_94413020	93789604	T T	TATATAAT others(23): Show TATATAATACTACATATATATATAATACTAC	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG02886.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0030 a0001c0001t0013g0030	1	76	0.0132	30	c.320 others(49): Show c.320-40545_320-40544insATACTACATATATATATAATACTACA TATA	GPC6	ENSG00000183098.12	transcript	ENST00000377047.9	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC6_chr13_93221807_94413020	93789610	T T	TAATACTA others(23): Show TAATACTACATATATATATATATAATACTAC	intron_variant intron_variant	MODIFIER	HG02886.hp1 NA19043.hp2 NA21309.hp2 HG02886.hp1 NA19043.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0006 a0001c0001t0011 a0001c0001t0004 a0001c0001t0006 a0001c0001t0011	a0001c0001t0004g0042 a0001c0001t0006g0072 a0001c0001t0011g0010 a0001c0001t0004g0042 a0001c0001t0006g0072 a0001c0001t0011g0010	3	76	0.0395	30	c.320 others(49): Show c.320-40543_320-40542insATACTACATATATATATATATAATAC TACA	GPC6	ENSG00000183098.12	transcript	ENST00000377047.9	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC6_chr13_93221807_94413020	94150814	G G	GTATATAT others(23): Show GTATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03540.hp1 NA19043.hp1 HG03540.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0007 a0001c0001t0004 a0001c0001t0007	a0001c0001t0004g0070 a0001c0001t0007g0034 a0001c0001t0004g0070 a0001c0001t0007g0034	2	76	0.0263	30	c.877 others(51): Show c.877+122937_877+122938insATATATATATATATATATATATAT ATATAT	GPC6	ENSG00000183098.12	transcript	ENST00000377047.9	protein_coding	4/8		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC6_chr13_93221807_94413020	94288792	A A	AATATATA others(23): Show AATATATATATATTTGTTATATATAATAAAT	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01433.hp1 HG01975.hp1 others(8): Show HG01167.hp1 HG01433.hp1 HG01975.hp1 HG02055.hp2 HG02258.hp1 HG02451.hp2 HG03471.hp2 HG03540.hp1 HG03540.hp2 HG04228.hp1 NA20752.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0003 a0002c0002 others(1): Show a0001c0001 a0001c0003 a0002c0002 a0003c0004	a0001c0001t0001 a0001c0001t0007 a0001c0001t0015 others(6): Show a0001c0001t0001 a0001c0001t0007 a0001c0001t0015 a0001c0001t0024 a0001c0003t0026 a0001c0003t0030 a0002c0002t0002 a0002c0002t0008 a0003c0004t0003	a0001c0001t0001g0009 a0001c0001t0001g0026 a0001c0001t0001g0028 others(8): Show a0001c0001t0001g0009 a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0007g0034 a0001c0001t0015g0036 a0001c0001t0024g0014 a0001c0003t0026g0006 a0001c0003t0030g0024 a0002c0002t0002g0039 a0002c0002t0008g0044 a0003c0004t0003g0058	11	76	0.1447	30	c.100 others(49): Show c.1008+2323_1008+2324insATTTGTTATATATAATAAATATATAT ATAT	GPC6	ENSG00000183098.12	transcript	ENST00000377047.9	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPC6_chr13_93221807_94413020	94288885	A A	AATATATA others(23): Show AATATATATAACAAATATATATATATTTGTT	intron_variant intron_variant	MODIFIER	HG01433.hp2 HG01981.hp2 HG02615.hp1 others(19): Show HG01433.hp2 HG01981.hp2 HG02615.hp1 HG02818.hp2 HG02895.hp2 HG02970.hp1 HG02970.hp2 HG03017.hp1 HG03017.hp2 HG03098.hp1 HG03098.hp2 HG03209.hp1 HG03225.hp2 HG03453.hp2 HG03486.hp2 HG03579.hp2 NA18522.hp1 NA19012.hp1 NA19043.hp1 NA19043.hp2 NA21309.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0002 a0001c0001 a0001c0003 a0002c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(13): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0008 a0001c0001t0009 a0001c0001t0012 a0001c0001t0015 a0001c0001t0016 a0001c0001t0021 a0001c0001t0022 a0001c0001t0034 a0001c0001t0035 a0001c0003t0011 a0001c0003t0014 a0002c0002t0008	a0001c0001t0001g0019 a0001c0001t0001g0032 a0001c0001t0001g0037 others(19): Show a0001c0001t0001g0019 a0001c0001t0001g0032 a0001c0001t0001g0037 a0001c0001t0001g0071 a0001c0001t0003g0065 a0001c0001t0004g0042 a0001c0001t0004g0067 a0001c0001t0004g0070 a0001c0001t0006g0025 a0001c0001t0006g0072 a0001c0001t0008g0060 a0001c0001t0009g0016 a0001c0001t0012g0002 a0001c0001t0015g0048 a0001c0001t0016g0035 a0001c0001t0021g0053 a0001c0001t0022g0040 a0001c0001t0034g0076 a0001c0001t0035g0073 a0001c0003t0011g0015 a0001c0003t0014g0021 a0002c0002t0008g0023	22	76	0.2895	30	c.100 others(49): Show c.1008+2425_1008+2454dupTATATATTTGTTATATATATAACAAA TATA	GPC6	ENSG00000183098.12	transcript	ENST00000377047.9	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr13	TogoVar
GPCPD1_chr20_5539439_5616006	5615194	A A	AATATATA others(23): Show AATATATATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0023 a0001c0001t0008g0023	1	386	0.0026	30	c.-43 others(41): Show c.-4382_-4381insATATATATATATATATATATATATATATAT	GPCPD1	ENSG00000125772.14	transcript	ENST00000379019.7	protein_coding		4189		chr20	TogoVar
GPCPD1_chr20_5539439_5616006	5615204	A A	AAAAAAAA others(23): Show AAAAAAAAAATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	386	0.0026	30	c.-43 others(41): Show c.-4392_-4391insATATATATATATATATATATATTTTTTTTT	GPCPD1	ENSG00000125772.14	transcript	ENST00000379019.7	protein_coding		4199		chr20	TogoVar
GPD1_chr12_50099008_50116313	50112907	C C	CGTTATGT others(23): Show CGTTATGTTATGTTATGTTATGTTATGTTAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0056 a0001c0001t0001g0056	1	406	0.0025	30	c.33 others(41): Show c.3388_*3389insGTTATGTTATGTTATGTTATGTTATGTTAT	GPD1	ENSG00000167588.13	transcript	ENST00000301149.8	protein_coding		1595		chr12	TogoVar
GPHN_chr14_66503147_67186803	66639121	A A	AATATATA others(23): Show AATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0124 a0001c0001t0001g0124	1	234	0.0043	30	c.65- others(47): Show c.65-41970_65-41969insATATATATATATATATATATATATATAT AT	GPHN	ENSG00000171723.16	transcript	ENST00000478722.6	protein_coding	1/22		INFO_REALIGN_3_PRIME	chr14	TogoVar
GPHN_chr14_66503147_67186803	67070715	A A	AAAAAAAA others(23): Show AAAAAAAAAATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0026 a0001c0001t0001g0026	1	234	0.0043	30	c.114 others(51): Show c.1144+11930_1144+11931insAAAAAAAATATATATATATATATA TATATA	GPHN	ENSG00000171723.16	transcript	ENST00000478722.6	protein_coding	11/22		INFO_REALIGN_3_PRIME	chr14	TogoVar
GPHN_chr14_66503147_67186803	67070715	A A	AAAAAAAA others(23): Show AAAAAAAATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00423.hp1 NA19063.hp2 HG00423.hp1 NA19063.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0188 a0001c0001t0001g0192 a0001c0001t0001g0188 a0001c0001t0001g0192	2	234	0.0086	30	c.114 others(51): Show c.1144+11930_1144+11931insAAAAAATATATATATATATATATA TATATA	GPHN	ENSG00000171723.16	transcript	ENST00000478722.6	protein_coding	11/22		INFO_REALIGN_3_PRIME	chr14	TogoVar
GPHN_chr14_66503147_67186803	67070715	A A	AAAATATA others(23): Show AAAATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03491.hp1 HG03491.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0108 a0001c0001t0001g0108	1	234	0.0043	30	c.114 others(51): Show c.1144+11930_1144+11931insAATATATATATATATATATATATA TATATA	GPHN	ENSG00000171723.16	transcript	ENST00000478722.6	protein_coding	11/22		INFO_REALIGN_3_PRIME	chr14	TogoVar
GPHN_chr14_66503147_67186803	67144262	T T	TATATATA others(23): Show TATATATATATATATACATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02015.hp2 HG02738.hp1 HG02015.hp2 HG02738.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0172 a0001c0001t0001g0219 a0001c0001t0001g0172 a0001c0001t0001g0219	2	234	0.0086	30	c.183 others(47): Show c.1836+828_1836+829insCATATATATATATACATATATATATATA TA	GPHN	ENSG00000171723.16	transcript	ENST00000478722.6	protein_coding	18/22		INFO_REALIGN_3_PRIME	chr14	TogoVar
GPHN_chr14_66503147_67186803	67144286	T T	TATACACA others(23): Show TATACACATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG00597.hp1 NA19066.hp2 NA19082.hp1 HG00597.hp1 NA19066.hp2 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0214 a0001c0001t0001g0216 a0001c0001t0001g0222 a0001c0001t0001g0214 a0001c0001t0001g0216 a0001c0001t0001g0222	3	234	0.0128	30	c.183 others(47): Show c.1836+838_1836+839insTACACATATATATATATATATATATATA CA	GPHN	ENSG00000171723.16	transcript	ENST00000478722.6	protein_coding	18/22		INFO_REALIGN_3_PRIME	chr14	TogoVar
GPHN_chr14_66503147_67186803	67144286	T T	TATATACA others(23): Show TATATACATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG02300.hp2 NA19005.hp2 HG02300.hp2 NA19005.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0191 a0001c0001t0001g0211 a0001c0001t0001g0191 a0001c0001t0001g0211	2	234	0.0086	30	c.183 others(47): Show c.1836+838_1836+839insTATACATATATATATATATATATATATA CA	GPHN	ENSG00000171723.16	transcript	ENST00000478722.6	protein_coding	18/22		INFO_REALIGN_3_PRIME	chr14	TogoVar
GPHN_chr14_66503147_67186803	67144286	T T	TATATATA others(23): Show TATATATACATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	NA18950.hp1 NA20300.hp1 NA18950.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0175 a0001c0001t0001g0213 a0001c0001t0001g0175 a0001c0001t0001g0213	2	234	0.0086	30	c.183 others(47): Show c.1836+838_1836+839insTATATACATATATATATATATATATATA CA	GPHN	ENSG00000171723.16	transcript	ENST00000478722.6	protein_coding	18/22		INFO_REALIGN_3_PRIME	chr14	TogoVar
GPM6A_chr4_175627937_175817264	175668519	A A	ATGTGTGT others(23): Show ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG01074.hp1 HG01433.hp2 others(17): Show HG00438.hp1 HG01074.hp1 HG01433.hp2 HG01928.hp2 HG01978.hp1 HG02602.hp1 HG02698.hp1 HG03471.hp1 HG03490.hp2 HG03540.hp1 HG03834.hp1 HG04204.hp1 HG04204.hp2 HG06807.hp1 NA18943.hp1 NA18952.hp1 NA18986.hp1 NA19002.hp2 NA19065.hp2 NA19078.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0002c0003t0014	a0001c0001t0001g0047 a0001c0001t0001g0114 a0001c0001t0001g0160 others(17): Show a0001c0001t0001g0047 a0001c0001t0001g0114 a0001c0001t0001g0160 a0001c0001t0001g0166 a0001c0001t0001g0174 a0001c0001t0001g0200 a0001c0001t0001g0205 a0001c0001t0001g0215 a0001c0001t0001g0225 a0001c0001t0001g0246 a0001c0001t0001g0258 a0001c0001t0002g0035 a0001c0001t0002g0078 a0001c0001t0002g0239 a0001c0001t0002g0245 a0001c0001t0003g0231 a0001c0001t0003g0267 a0001c0001t0005g0178 a0001c0001t0005g0183 a0002c0003t0014g0202	20	270	0.0741	30	c.387 others(47): Show c.387+5160_387+5161insCACACACACACACACACACACACACACA CA	GPM6A	ENSG00000150625.17	transcript	ENST00000393658.7	protein_coding	3/6			chr4	TogoVar
GPNMB_chr7_23241775_23280108	23275421	T T	TATATACA others(23): Show TATATACATATATATATATATATATATATAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0032 a0001c0002t0002g0032	1	380	0.0026	30	c.11 others(41): Show c.1197_*1198insATATACATATATATATATATATATATATAC	GPNMB	ENSG00000136235.17	transcript	ENST00000258733.9	protein_coding		314		chr7	TogoVar
GPR107_chr9_130048906_130145164	130084047	C C	CATATATA others(23): Show CATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18971.hp1 NA18990.hp1 NA19068.hp1 others(1): Show NA18971.hp1 NA18990.hp1 NA19068.hp1 NA19077.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0001 a0001c0001t0005	a0001c0001t0001g0014 a0001c0001t0005g0012 a0001c0001t0005g0015 others(1): Show a0001c0001t0001g0014 a0001c0001t0005g0012 a0001c0001t0005g0015 a0001c0001t0005g0021	4	306	0.0131	30	c.564 others(45): Show c.564+467_564+468insATATATATATATATATATATATATATATAT	GPR107	ENSG00000148358.21	transcript	ENST00000347136.11	protein_coding	6/17		INFO_REALIGN_3_PRIME	chr9	TogoVar
GPR137B_chr1_236137539_236213907	236178785	G G	GTTTTTTT others(23): Show GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01981.hp1 HG02040.hp2 HG03492.hp2 others(1): Show HG01981.hp1 HG02040.hp2 HG03492.hp2 NA18954.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0024 a0001c0001t0001g0037 a0001c0001t0001g0044 others(1): Show a0001c0001t0001g0024 a0001c0001t0001g0037 a0001c0001t0001g0044 a0001c0001t0001g0060	4	386	0.0104	30	c.687 others(45): Show c.687+150_687+179dupTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	GPR137B	ENSG00000077585.14	transcript	ENST00000366592.8	protein_coding	3/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
GPR139_chr16_20023239_20078890	20041147	A A	AGAGGGGA others(23): Show AGAGGGGAGGGGAGGGGAGGGGAGGGGAGGG	intron_variant intron_variant	MODIFIER	NA19057.hp2 NA19057.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0284 a0001c0001t0016g0284	1	364	0.0028	30	c.128 others(47): Show c.128-8479_128-8478insCCCTCCCCTCCCCTCCCCTCCCCTCCCC TC	GPR139	ENSG00000180269.8	transcript	ENST00000570682.2	protein_coding	1/1			chr16	TogoVar
GPR139_chr16_20023239_20078890	20041152	A A	AGAGGGGA others(23): Show AGAGGGGAGGGGAGGGGAGGGGAGGGGAGGG	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG04184.hp2 HG00621.hp2 HG04184.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0010 a0001c0002t0015 a0001c0001t0010 a0001c0002t0015	a0001c0001t0010g0343 a0001c0002t0015g0196 a0001c0001t0010g0343 a0001c0002t0015g0196	2	364	0.0055	30	c.128 others(47): Show c.128-8513_128-8484dupCCCTCCCCTCCCCTCCCCTCCCCTCCCC TC	GPR139	ENSG00000180269.8	transcript	ENST00000570682.2	protein_coding	1/1			chr16	TogoVar
GPR139_chr16_20023239_20078890	20074946	G G	GGGGGGAG others(23): Show GGGGGGAGAGAGAGAGAGAGAGAGAGAGAGA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0186 a0001c0002t0001g0186	1	364	0.0028	30	c.-13 others(41): Show c.-1331_-1330insTCTCTCTCTCTCTCTCTCTCTCTCTCCCCC	GPR139	ENSG00000180269.8	transcript	ENST00000570682.2	protein_coding		1057		chr16	TogoVar
GPR142_chr17_74362506_74377600	74365044	C C	CATATATA others(23): Show CATATATATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00423.hp2 NA18952.hp1 HG00423.hp2 NA18952.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0001 a0001c0002t0001g0017 a0001c0002t0001g0001 a0001c0002t0001g0017	2	452	0.0044	30	c.-28 others(41): Show c.-2824_-2823insATATATATATATATATATATATATATATAT	GPR142	ENSG00000257008.7	transcript	ENST00000582579.6	protein_coding		2461		chr17	TogoVar
GPR146_chr7_1039546_1064261	1059904	A A	AGGCGGGT others(23): Show AGGCGGGTCTTAGTGAGGCAGGTCTTAGTGG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01081.hp1 HG01928.hp1 HG01934.hp1 others(13): Show HG01081.hp1 HG01928.hp1 HG01934.hp1 HG01943.hp2 HG01952.hp1 HG01975.hp1 HG01993.hp1 HG02293.hp2 HG02300.hp2 HG02451.hp1 HG02486.hp1 HG02615.hp2 HG02723.hp1 HG03540.hp1 HG04199.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0010 a0001c0001t0001 a0001c0001t0002 a0001c0001t0010	a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0002g0022 others(11): Show a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0002g0022 a0001c0001t0002g0036 a0001c0001t0002g0130 a0001c0001t0002g0131 a0001c0001t0002g0132 a0001c0001t0002g0152 a0001c0001t0002g0170 a0001c0001t0010g0034 a0001c0001t0010g0105 a0001c0001t0010g0106 a0001c0001t0010g0108 a0001c0001t0010g0110	16	434	0.0369	30	c.13 others(41): Show c.1387_*1388insGGCGGGTCTTAGTGAGGCAGGTCTTAGTGG	GPR146	ENSG00000164849.10	transcript	ENST00000444847.2	protein_coding		644		chr7	TogoVar
GPR146_chr7_1039546_1064261	1059971	G G	GTAGTGGG others(23): Show GTAGTGGGGCGGGTCTTAGTGGGGCGGGTCT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01109.hp2 HG02738.hp1 HG02809.hp2 others(1): Show HG01109.hp2 HG02738.hp1 HG02809.hp2 HG02895.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0073 a0001c0001t0001g0109 others(1): Show a0001c0001t0001g0001 a0001c0001t0001g0073 a0001c0001t0001g0109 a0001c0001t0001g0207	4	434	0.0092	30	c.14 others(41): Show c.1454_*1455insTAGTGGGGCGGGTCTTAGTGGGGCGGGTCT	GPR146	ENSG00000164849.10	transcript	ENST00000444847.2	protein_coding		711		chr7	TogoVar
GPR146_chr7_1039546_1064261	1060001	T T	TTAGTGGG others(23): Show TTAGTGGGGCGGGTCTGTAGTGGGGCGGGTC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00741.hp2 HG01070.hp2 HG01071.hp1 others(19): Show HG00741.hp2 HG01070.hp2 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01168.hp1 HG01515.hp2 HG01516.hp2 HG01884.hp2 HG01978.hp2 HG01981.hp1 HG02280.hp1 HG02602.hp1 HG02615.hp1 HG02735.hp1 HG03098.hp1 HG03688.hp1 HG03688.hp2 HG03710.hp2 HG04115.hp1 NA20752.hp2 NA20805.hp1	a0002 a0009 a0002 a0009	a0002c0003 a0009c0007 a0002c0003 a0009c0007	a0002c0003t0004 a0009c0007t0004 a0002c0003t0004 a0009c0007t0004	a0002c0003t0004g0006 a0002c0003t0004g0012 a0002c0003t0004g0020 others(6): Show a0002c0003t0004g0006 a0002c0003t0004g0012 a0002c0003t0004g0020 a0002c0003t0004g0055 a0002c0003t0004g0056 a0002c0003t0004g0136 a0002c0003t0004g0173 a0002c0003t0004g0225 a0009c0007t0004g0012	22	434	0.0507	30	c.14 others(41): Show c.1484_*1485insTAGTGGGGCGGGTCTGTAGTGGGGCGGGTC	GPR146	ENSG00000164849.10	transcript	ENST00000444847.2	protein_coding		741		chr7	TogoVar
GPR146_chr7_1039546_1064261	1060034	G G	GTAGTGAG others(23): Show GTAGTGAGGCGGGTCTTAGTGAGGCGGGTCT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp1 HG03225.hp1 HG03453.hp1 HG01243.hp1 HG03225.hp1 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0008 a0001c0001t0001 a0001c0001t0008	a0001c0001t0001g0224 a0001c0001t0008g0145 a0001c0001t0008g0146 a0001c0001t0001g0224 a0001c0001t0008g0145 a0001c0001t0008g0146	3	434	0.0069	30	c.15 others(41): Show c.1517_*1518insTAGTGAGGCGGGTCTTAGTGAGGCGGGTCT	GPR146	ENSG00000164849.10	transcript	ENST00000444847.2	protein_coding		774		chr7	TogoVar
GPR155_chr2_174426571_174492029	174454804	G G	GAAGGGAA others(23): Show GAAGGGAAGGAAGGGAAAGGAAGGAAAGGGA	intron_variant intron_variant	MODIFIER	HG03490.hp2 HG03490.hp2	a0003 a0003	a0003c0014 a0003c0014	a0003c0014t0025 a0003c0014t0025	a0003c0014t0025g0152 a0003c0014t0025g0152	1	300	0.0033	30	c.177 others(47): Show c.1772-964_1772-963insTCCCTTTCCTTCCTTTCCCTTCCTTCCC TT	GPR155	ENSG00000163328.14	transcript	ENST00000392552.7	protein_coding	10/15			chr2	TogoVar
GPR157_chr1_9095305_9134102	9116363	A A	ATATATAT others(23): Show ATATATATTATATATATATAATATATATAAT	intron_variant intron_variant	MODIFIER	NA18747.hp1 NA18747.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0041 a0002c0002t0041	a0002c0002t0041g0141 a0002c0002t0041g0141	1	404	0.0025	30	c.384 others(47): Show c.384-4875_384-4874insATTATATATATTATATATATATAATATA TA	GPR157	ENSG00000180758.12	transcript	ENST00000377411.5	protein_coding	1/3			chr1	TogoVar

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