Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

Chr

Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Samplehapid

No_hapid

No_samplehapid

Start

End

Minac

Maxac

Minlen

Maxlen

Sort By

Order by

regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
H2AC4_chr6_26028092_26038618	26031152	G G	GTATATAT others(23): Show GTATATATATATATATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00408.hp2 HG01074.hp2 HG02015.hp1 others(6): Show HG00408.hp2 HG01074.hp2 HG02015.hp1 HG02647.hp1 HG04204.hp1 NA18747.hp1 NA18980.hp2 NA19005.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0001c0002t0001	a0001c0001t0001g0000 a0001c0001t0002g0000 a0001c0001t0007g0000 others(1): Show a0001c0001t0001g0000 a0001c0001t0002g0000 a0001c0001t0007g0000 a0001c0002t0001g0000	9	406	0.0222	30	c.20 others(41): Show c.2023_*2024insTATATATATATATATATATATATATATATA	H2AC4	ENSG00000278463.2	transcript	ENST00000615868.2	protein_coding		1939		chr6	TogoVar
H3-3A_chr1_226057716_226077019	226074979	C C	CTTTTTTT others(23): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0028 a0001c0001t0002g0028	1	434	0.0023	30	c.35 others(41): Show c.3500_*3501insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	H3-3A	ENSG00000163041.13	transcript	ENST00000366815.10	protein_coding		2961		chr1	TogoVar
H3C14_chr1_149835687_149846208	149837562	C C	CAGATGGG others(23): Show CAGATGGGGCTAATGAAGGTGTCTTCCAGGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02135.hp2 HG02135.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	302	0.0033	30	c.31 others(41): Show c.3155_*3184dupTCCTGGAAGACACCTTCATTAGCCCCATCT	H3C14	ENSG00000203811.2	transcript	ENST00000369158.2	protein_coding		3124		chr1	TogoVar
H3C14_chr1_149835687_149846208	149842097	C C	CCCCGTCC others(23): Show CCCCGTCCCGTCCCGTCCCGTCCCGTCCCGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01358.hp1 HG01358.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	302	0.0033	30	c.-94 others(39): Show c.-941_-940insACGGGACGGGACGGGACGGGACGGGACGGG	H3C14	ENSG00000203811.2	transcript	ENST00000369158.2	protein_coding		890		chr1	TogoVar
H3C15_chr1_149847608_149858125	149856219	T T	TCCCCATC others(23): Show TCCCCATCTTCCTGGAAGACACCTTCATTAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02135.hp1 HG02135.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	332	0.0030	30	c.31 others(41): Show c.3154_*3155insCCCCATCTTCCTGGAAGACACCTTCATTAG	H3C15	ENSG00000203852.4	transcript	ENST00000403683.2	protein_coding		3095		chr1	TogoVar
H3C2_chr6_26026589_26037099	26031152	G G	GTATATAT others(23): Show GTATATATATATATATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00408.hp2 HG01074.hp2 HG02015.hp1 others(6): Show HG00408.hp2 HG01074.hp2 HG02015.hp1 HG02647.hp1 HG04204.hp1 NA18747.hp1 NA18980.hp2 NA19005.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	9	396	0.0227	30	c.49 others(39): Show c.497_*498insTATATATATATATATATATATATATATATA	H3C2	ENSG00000286522.2	transcript	ENST00000621411.3	protein_coding		436		chr6	TogoVar
H3C4_chr6_26191784_26202286	26198527	T T	TTATCTAG others(23): Show TTATCTAGTATTATCCAAAAGCAAAACAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18998.hp2 NA18998.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	396	0.0025	30	c.-12 others(41): Show c.-1278_-1277insTTTTGTTTTGCTTTTGGATAATACTAGATA	H3C4	ENSG00000197409.8	transcript	ENST00000356476.3	protein_coding		1242		chr6	TogoVar
H3Y1_chr5_17649868_17660849	17651922	C C	CTTTCTTT others(23): Show CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA20300.hp2 NA20300.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0000 a0001c0002t0002g0000	1	376	0.0027	30	c.32 others(41): Show c.3205_*3206insAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	H3Y1	ENSG00000269466.4	transcript	ENST00000598383.3	protein_coding		2945		chr5	TogoVar
H3Y2_chr5_17485967_17497076	17493385	C C	CATATATA others(23): Show CATATATATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp1 HG00423.hp1 HG00597.hp2 others(54): Show HG00323.hp1 HG00423.hp1 HG00597.hp2 HG00621.hp2 HG01070.hp1 HG01071.hp2 HG01074.hp2 HG01106.hp1 HG01169.hp2 HG01261.hp1 HG01516.hp1 HG01517.hp2 HG02155.hp1 HG02258.hp2 HG03130.hp1 HG03453.hp2 HG03491.hp2 HG03492.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 NA18941.hp1 NA18946.hp1 NA18949.hp1 NA18950.hp1 NA18956.hp2 NA18959.hp1 NA18962.hp1 NA18969.hp1 NA18970.hp1 NA18970.hp2 NA18972.hp1 NA18972.hp2 NA18974.hp1 NA18974.hp2 NA18983.hp2 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18990.hp1 NA18997.hp1 NA18997.hp2 NA18998.hp2 NA19009.hp2 NA19011.hp1 NA19030.hp2 NA19055.hp1 NA19060.hp2 NA19065.hp2 NA19070.hp2 NA19079.hp1 NA19081.hp2 NA19083.hp2 NA19086.hp1 NA19086.hp2 NA20129.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 a0001c0002t0005	a0001c0001t0001g0000 a0001c0001t0003g0000 a0001c0002t0001g0000 others(1): Show a0001c0001t0001g0000 a0001c0001t0003g0000 a0001c0002t0001g0000 a0001c0002t0005g0000	57	400	0.1425	30	c.-16 others(41): Show c.-1618_-1617insATATATATATATATATATATATATATATAT	H3Y2	ENSG00000268799.4	transcript	ENST00000600799.3	protein_coding		1310		chr5	TogoVar
H4C14_chr1_149827657_149838052	149827821	T T	TTTTCTTT others(23): Show TTTTCTTTCTTTTTCTTTCTTTCTTTCTTTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp1 HG00280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	236	0.0042	30	c.-48 others(41): Show c.-4864_-4863insTTTCTTTCTTTTTCTTTCTTTCTTTCTTTC	H4C14	ENSG00000270882.3	transcript	ENST00000578186.3	protein_coding		4835		chr1	TogoVar
H4C14_chr1_149827657_149838052	149827865	T T	TTTCTTTC others(23): Show TTTCTTTCTTTCTTTCTTTCTTTCTTCTTTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp2 HG01993.hp1 HG00408.hp2 HG01993.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	2	236	0.0085	30	c.-48 others(41): Show c.-4820_-4819insTTCTTTCTTTCTTTCTTTCTTTCTTCTTTC	H4C14	ENSG00000270882.3	transcript	ENST00000578186.3	protein_coding		4791		chr1	TogoVar
H4C14_chr1_149827657_149838052	149837562	C C	CAGATGGG others(23): Show CAGATGGGGCTAATGAAGGTGTCTTCCAGGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02135.hp2 HG02135.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	236	0.0042	30	c.45 others(41): Show c.4566_*4567insAGATGGGGCTAATGAAGGTGTCTTCCAGGA	H4C14	ENSG00000270882.3	transcript	ENST00000578186.3	protein_coding		4511		chr1	TogoVar
H4C2_chr6_26021896_26032283	26031152	G G	GTATATAT others(23): Show GTATATATATATATATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp1 HG01074.hp2 HG02015.hp2 others(6): Show HG00408.hp1 HG01074.hp2 HG02015.hp2 HG02647.hp1 HG04204.hp1 NA18747.hp1 NA18980.hp2 NA19005.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0002t0002 a0001c0001t0003 a0001c0002t0002	a0001c0001t0003g0000 a0001c0002t0002g0000 a0001c0001t0003g0000 a0001c0002t0002g0000	9	400	0.0225	30	c.-39 others(41): Show c.-3901_-3900insTATATATATATATATATATATATATATATA	H4C2	ENSG00000278705.3	transcript	ENST00000377745.5	protein_coding		3870		chr6	TogoVar
HACD2_chr3_123486554_123590053	123534798	T T	TTGTGTGT others(23): Show TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG03471.hp2 HG02451.hp1 HG03471.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0010 a0001c0003t0010	a0001c0003t0010g0338 a0001c0003t0010g0339 a0001c0003t0010g0338 a0001c0003t0010g0339	2	350	0.0057	30	c.293 others(47): Show c.293-6325_293-6324insCACACACACACACACACACACACACACA CA	HACD2	ENSG00000206527.10	transcript	ENST00000383657.10	protein_coding	3/6			chr3	TogoVar
HACD3_chr15_65525463_65583349	65527131	A A	AAAAATAA others(23): Show AAAAATAAAATAAAATAAAATAAAATAAAAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01070.hp1 HG01071.hp1 HG01123.hp1 others(19): Show HG01070.hp1 HG01071.hp1 HG01123.hp1 HG01243.hp1 HG01978.hp2 HG02451.hp1 HG02615.hp1 HG02647.hp1 HG02717.hp2 HG02723.hp2 HG02895.hp1 HG02897.hp1 HG03195.hp1 HG03195.hp2 HG03453.hp1 HG03486.hp1 HG03490.hp1 HG03492.hp1 HG03834.hp2 NA19240.hp1 NA20129.hp2 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0009 a0001c0001t0011 others(1): Show a0001c0001t0002 a0001c0001t0009 a0001c0001t0011 a0001c0002t0002	a0001c0001t0002g0015 a0001c0001t0002g0197 a0001c0001t0002g0209 others(18): Show a0001c0001t0002g0015 a0001c0001t0002g0197 a0001c0001t0002g0209 a0001c0001t0002g0210 a0001c0001t0002g0212 a0001c0001t0002g0230 a0001c0001t0002g0231 a0001c0001t0002g0238 a0001c0001t0002g0240 a0001c0001t0002g0241 a0001c0001t0002g0242 a0001c0001t0002g0252 a0001c0001t0009g0028 a0001c0001t0009g0029 a0001c0001t0011g0173 a0001c0002t0002g0200 a0001c0002t0002g0201 a0001c0002t0002g0224 a0001c0002t0002g0225 a0001c0002t0002g0237 a0001c0002t0002g0254	22	328	0.0671	30	c.-35 others(41): Show c.-3501_-3500insAAAATAAAATAAAATAAAATAAAATAAAAT	HACD3	ENSG00000074696.13	transcript	ENST00000261875.10	protein_coding		3331		chr15	TogoVar
HACE1_chr6_104723094_104864919	104831918	A A	AAGAAGAG others(23): Show AAGAAGAGAAGAGAAGAGAAGAGAAGAGAAG	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG01255.hp1 HG01928.hp1 others(6): Show HG00323.hp2 HG01255.hp1 HG01928.hp1 HG02155.hp1 HG02273.hp1 HG02970.hp1 HG03490.hp2 HG03492.hp2 NA18960.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0001t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0001g0246 a0001c0001t0001g0267 a0001c0001t0001g0296 others(6): Show a0001c0001t0001g0246 a0001c0001t0001g0267 a0001c0001t0001g0296 a0001c0001t0002g0035 a0001c0001t0002g0038 a0001c0001t0002g0050 a0001c0002t0001g0127 a0001c0002t0001g0128 a0001c0002t0001g0129	9	346	0.0260	30	c.534 others(47): Show c.534+1094_534+1123dupCTTCTCTTCTCTTCTCTTCTCTTCTCTT CT	HACE1	ENSG00000085382.12	transcript	ENST00000262903.9	protein_coding	6/23			chr6	TogoVar
HACL1_chr3_15555699_15606569	15592398	A A	ACATGTAG others(23): Show ACATGTAGACACACGTATACACACACGTATG	intron_variant intron_variant	MODIFIER	HG02970.hp1 HG02976.hp2 HG03195.hp1 others(3): Show HG02970.hp1 HG02976.hp2 HG03195.hp1 NA19082.hp1 NA19240.hp1 NA21309.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0001 a0001c0003t0001 a0001c0003t0003 a0001c0002t0001 a0001c0003t0001 a0001c0003t0003	a0001c0002t0001g0333 a0001c0003t0001g0044 a0001c0003t0001g0045 others(3): Show a0001c0002t0001g0333 a0001c0003t0001g0044 a0001c0003t0001g0045 a0001c0003t0001g0046 a0001c0003t0003g0054 a0001c0003t0003g0055	6	428	0.0140	30	c.228 others(45): Show c.228-748_228-719dupCATACGTGTGTGTATACGTGTGTCTACATG	HACL1	ENSG00000131373.15	transcript	ENST00000321169.10	protein_coding	3/16			chr3	TogoVar
HADHB_chr2_26239939_26295465	26266871	C C	CAAAAAAA others(23): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0128 a0001c0001t0001g0128	1	290	0.0035	30	c.210 others(47): Show c.210-3059_210-3058insAAAAAAAAAAAAAAAAAAAAAAAAAAAA AA	HADHB	ENSG00000138029.14	transcript	ENST00000317799.10	protein_coding	4/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
HAGH_chr16_1802629_1831825	1804244	C C	CTATATAT others(23): Show CTATATATATGTATGTGTGTGTATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02135.hp1 HG02135.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0007 a0001c0004t0007	a0001c0004t0007g0145 a0001c0004t0007g0145	1	436	0.0023	30	c.50 others(41): Show c.5038_*5039insTATATATATACACACACATACATATATATA	HAGH	ENSG00000063854.13	transcript	ENST00000397356.8	protein_coding		3384		chr16	TogoVar
HAO1_chr20_7877985_7945458	7936503	C C	CGTGTGTG others(23): Show CGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	NA18949.hp2 NA18949.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0315 a0001c0001t0002g0315	1	348	0.0029	30	c.138 others(47): Show c.138-1898_138-1869dupACACACACACACACACACACACACACAC AC	HAO1	ENSG00000101323.5	transcript	ENST00000378789.4	protein_coding	1/7			chr20	TogoVar
HAO2_chr1_119363785_119399130	119394614	C C	CATATATA others(23): Show CATATATATATACTCATATATATATACTTAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00544.hp2 HG00642.hp1 HG01069.hp1 others(66): Show HG00544.hp2 HG00642.hp1 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp2 HG01109.hp1 HG01993.hp1 HG02027.hp2 HG02074.hp2 HG02083.hp2 HG02135.hp2 HG02451.hp1 HG02683.hp1 HG02698.hp1 HG03239.hp2 HG03669.hp2 HG03927.hp2 HG03942.hp2 HG04115.hp2 HG04199.hp1 HG04204.hp2 HG04228.hp1 NA18939.hp1 NA18944.hp1 NA18949.hp1 NA18952.hp2 NA18954.hp1 NA18955.hp2 NA18956.hp2 NA18962.hp2 NA18963.hp1 NA18964.hp1 NA18973.hp2 NA18974.hp1 NA18984.hp1 NA18986.hp2 NA18989.hp1 NA18991.hp2 NA18992.hp2 NA18993.hp2 NA18998.hp2 NA19000.hp1 NA19001.hp2 NA19002.hp2 NA19005.hp1 NA19007.hp1 NA19009.hp2 NA19010.hp1 NA19011.hp1 NA19054.hp1 NA19055.hp2 NA19059.hp1 NA19063.hp2 NA19066.hp1 NA19072.hp1 NA19074.hp2 NA19076.hp2 NA19077.hp2 NA19080.hp1 NA19085.hp1 NA19086.hp2 NA19088.hp2 NA19090.hp1 NA19091.hp1 NA20752.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	a0001 a0005 a0006 others(1): Show a0001 a0005 a0006 a0007	a0001c0001 a0001c0012 a0005c0009 others(2): Show a0001c0001 a0001c0012 a0005c0009 a0006c0010 a0007c0008	a0001c0001t0001 a0001c0001t0004 a0001c0012t0001 others(3): Show a0001c0001t0001 a0001c0001t0004 a0001c0012t0001 a0005c0009t0001 a0006c0010t0001 a0007c0008t0001	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0035 others(22): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0035 a0001c0001t0001g0058 a0001c0001t0001g0146 a0001c0001t0001g0150 a0001c0001t0001g0152 a0001c0001t0001g0250 a0001c0001t0001g0251 a0001c0001t0001g0252 a0001c0001t0001g0254 a0001c0001t0001g0256 a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0001g0262 a0001c0001t0001g0263 a0001c0001t0001g0288 a0001c0001t0004g0001 a0001c0001t0004g0255 a0001c0001t0004g0261 a0001c0001t0004g0269 a0001c0012t0001g0001 a0005c0009t0001g0001 a0006c0010t0001g0258 a0007c0008t0001g0264	69	428	0.1612	30	c.77 others(39): Show c.774_*775insATATATATATACTCATATATATATACTTAT	HAO2	ENSG00000116882.15	transcript	ENST00000325945.4	protein_coding		485		chr1	TogoVar
HAP1_chr17_41717640_41739643	41730053	G G	GAGAGAGA others(23): Show GAGAGAGAGAGAGAGAGAAGGAAAGAAAGAA	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG03130.hp2 NA19030.hp1 others(1): Show HG01891.hp2 HG03130.hp2 NA19030.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0010 a0001c0001t0001 a0001c0001t0010	a0001c0001t0001g0013 a0001c0001t0001g0192 a0001c0001t0010g0314 a0001c0001t0001g0013 a0001c0001t0001g0192 a0001c0001t0010g0314	4	374	0.0107	30	c.106 others(49): Show c.1069+1439_1069+1440insTTCTTTCTTTCCTTCTCTCTCTCTCT CTCT	HAP1	ENSG00000173805.16	transcript	ENST00000347901.9	protein_coding	6/10			chr17	TogoVar
HAPLN1_chr5_83632805_83725855	83661197	C C	CATCTATA others(23): Show CATCTATATCTATATCTATATCTATATCTAT	intron_variant intron_variant	MODIFIER	NA19054.hp1 NA19054.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0102 a0001c0001t0003g0102	1	372	0.0027	30	c.101 others(47): Show c.101-8374_101-8373insATAGATATAGATATAGATATAGATATAG AT	HAPLN1	ENSG00000145681.11	transcript	ENST00000274341.9	protein_coding	2/4			chr5	TogoVar
HAPSTR1_chr16_9086644_9126635	9087606	T T	TCCCCCCC others(23): Show TCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19091.hp2 NA19091.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	398	0.0025	30	c.-44 others(41): Show c.-4439_-4438insCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC	HAPSTR1	ENSG00000182831.12	transcript	ENST00000327827.12	protein_coding		4037		chr16	TogoVar
HARBI1_chr11_46597861_46622227	46609588	C C	CACCCACC others(23): Show CACCCACCTCGGCCTCCAAAATGCTGGGATT	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0040 a0001c0001t0001g0040	1	258	0.0039	30	c.671 others(47): Show c.671-5680_671-5679insAATCCCAGCATTTTGGAGGCCGAGGTGG GT	HARBI1	ENSG00000180423.4	transcript	ENST00000326737.3	protein_coding	2/2			chr11	TogoVar
HASPIN_chr17_3718903_3731699	3730454	A A	AAAAAAAA others(23): Show AAAAAAAAATAAAATAAAAAAATAAATAAAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18939.hp1 NA18939.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0000 a0002c0002t0002g0000	1	414	0.0024	30	c.41 others(41): Show c.4122_*4123insAAAAAAAATAAAATAAAAAAATAAATAAAT	HASPIN	ENSG00000177602.5	transcript	ENST00000325418.5	protein_coding		3756		chr17	TogoVar
HAT1_chr2_171917461_171988686	171963192	C C	CATATTTA others(23): Show CATATTTATATACATAACTATTTATAAATAT	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0322 a0001c0001t0001g0322	1	326	0.0031	30	c.310 others(47): Show c.310-2134_310-2105dupCATAACTATTTATAAATATATATTTATA TA	HAT1	ENSG00000128708.13	transcript	ENST00000264108.5	protein_coding	4/10		INFO_REALIGN_3_PRIME	chr2	TogoVar
HAT1_chr2_171917461_171988686	171977524	A A	AAAATATA others(23): Show AAAATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03654.hp2 HG03654.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0227 a0001c0001t0001g0227	1	326	0.0031	30	c.975 others(47): Show c.975+1217_975+1218insAATATATATATATATATATATATATATA TA	HAT1	ENSG00000128708.13	transcript	ENST00000264108.5	protein_coding	9/10		INFO_REALIGN_3_PRIME	chr2	TogoVar
HAUS2_chr15_42543838_42574994	42544840	C C	CTATATAT others(23): Show CTATATATATATATATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0048 a0001c0001t0003g0048	1	350	0.0029	30	c.-40 others(41): Show c.-4033_-4032insTATATATATATATATATATATATATATATA	HAUS2	ENSG00000137814.12	transcript	ENST00000260372.8	protein_coding		3997		chr15	TogoVar
HAUS2_chr15_42543838_42574994	42544842	C C	CAATATAT others(23): Show CAATATATATATATATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0028 a0001c0001t0005g0028	1	350	0.0029	30	c.-40 others(41): Show c.-4031_-4030insAATATATATATATATATATATATATATATA	HAUS2	ENSG00000137814.12	transcript	ENST00000260372.8	protein_coding		3995		chr15	TogoVar
HAUS2_chr15_42543838_42574994	42544842	C C	CACAATAT others(23): Show CACAATATATATATATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0030 a0001c0001t0005g0030	1	350	0.0029	30	c.-40 others(41): Show c.-4031_-4030insACAATATATATATATATATATATATATATA	HAUS2	ENSG00000137814.12	transcript	ENST00000260372.8	protein_coding		3995		chr15	TogoVar
HAUS2_chr15_42543838_42574994	42544842	C C	CACTATAT others(23): Show CACTATATATATATATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01515.hp2 HG01515.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0033 a0001c0001t0005g0033	1	350	0.0029	30	c.-40 others(41): Show c.-4031_-4030insACTATATATATATATATATATATATATATA	HAUS2	ENSG00000137814.12	transcript	ENST00000260372.8	protein_coding		3995		chr15	TogoVar
HAUS2_chr15_42543838_42574994	42544842	C C	CTATATAT others(23): Show CTATATATATATATATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02895.hp2 HG02895.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0031 a0001c0001t0017g0031	1	350	0.0029	30	c.-40 others(41): Show c.-4031_-4030insTATATATATATATATATATATATATATATA	HAUS2	ENSG00000137814.12	transcript	ENST00000260372.8	protein_coding		3995		chr15	TogoVar
HAVCR1_chr5_157024413_157064116	157044615	G G	GAGAAAGA others(23): Show GAGAAAGAAAGAAAGAAAGAAAAAGAAAGAA	intron_variant intron_variant	MODIFIER	NA20752.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0106 a0001c0001t0001g0106	1	352	0.0028	30	c.782 others(47): Show c.782-1934_782-1933insTTCTTTCTTTTTCTTTCTTTCTTTCTTT CT	HAVCR1	ENSG00000113249.14	transcript	ENST00000523175.6	protein_coding	5/8			chr5	TogoVar
HBA1_chr16_171680_182522	181982	C C	CCACACAC others(23): Show CCACACACACACACACACACACACACACACA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01943.hp2 HG02615.hp1 HG02615.hp2 others(8): Show HG01943.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp1 NA18964.hp1 NA18978.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19057.hp2 NA19074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	11	398	0.0276	30	c.45 others(41): Show c.4571_*4572insCACACACACACACACACACACACACACACA	HBA1	ENSG00000206172.8	transcript	ENST00000320868.9	protein_coding		4461		chr16	TogoVar
HBP1_chr7_107164003_107207522	107170920	T T	TATGTATA others(23): Show TATGTATATGTATAAAATATATAACATATAC	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01358.hp2 HG01517.hp1 HG01167.hp1 HG01358.hp2 HG01517.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188	3	368	0.0082	30	c.-16 others(47): Show c.-16+1744_-16+1773dupGTATAAAATATATAACATATACATGTAT AT	HBP1	ENSG00000105856.14	transcript	ENST00000222574.9	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr7	TogoVar
HBP1_chr7_107164003_107207522	107170974	C C	CATACATG others(23): Show CATACATGTATATATATAAAATATATAACAT	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0130 a0001c0001t0001g0130	1	368	0.0027	30	c.-16 others(47): Show c.-16+1831_-16+1860dupTATATAAAATATATAACATATACATGTA TA	HBP1	ENSG00000105856.14	transcript	ENST00000222574.9	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr7	TogoVar
HBQ1_chr16_175459_186179	181982	C C	CCACACAC others(23): Show CCACACACACACACACACACACACACACACA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01943.hp2 HG02615.hp2 HG02630.hp1 others(8): Show HG01943.hp2 HG02615.hp2 HG02630.hp1 NA18964.hp1 NA18978.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19057.hp2 NA19070.hp2 NA19074.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0001t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0001g0001 a0001c0001t0002g0001 a0001c0002t0001g0001 a0001c0001t0001g0001 a0001c0001t0002g0001 a0001c0002t0001g0001	11	384	0.0287	30	c.87 others(39): Show c.874_*875insCACACACACACACACACACACACACACACA	HBQ1	ENSG00000086506.3	transcript	ENST00000199708.3	protein_coding		804		chr16	TogoVar
HCFC2_chr12_104059531_104111524	104110813	G G	GAAGTTCT others(23): Show GAAGTTCTGTCAGTTCTGTAAGTGCAGTATT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19060.hp2 NA19060.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0013 a0001c0001t0001g0013	1	382	0.0026	30	c.75 others(41): Show c.7540_*7541insAAGTTCTGTCAGTTCTGTAAGTGCAGTATT	HCFC2	ENSG00000111727.12	transcript	ENST00000229330.9	protein_coding		4290		chr12	TogoVar
HCK_chr20_32047242_32106856	32094807	A A	AGGAAAGA others(23): Show AGGAAAGAAAGAAAGAGAGAGAAAGAGAAAG	intron_variant intron_variant	MODIFIER	HG02083.hp1 HG02083.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0200 a0001c0001t0001g0200	1	290	0.0035	30	c.124 others(47): Show c.1246+791_1246+792insGGAAAGAAAGAAAGAGAGAGAAAGAGAA AG	HCK	ENSG00000101336.18	transcript	ENST00000375852.5	protein_coding	11/12			chr20	TogoVar
HCN1_chr5_45249948_45701380	45375097	A A	ATTTTATA others(23): Show ATTTTATAATATATAATATATTATATATAAT	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0089 a0001c0001t0005g0089	1	226	0.0044	30	c.123 others(51): Show c.1230+21394_1230+21395insATTATATATAATATATTATATATT ATAAAA	HCN1	ENSG00000164588.8	transcript	ENST00000303230.6	protein_coding	4/7			chr5	TogoVar
HCN1_chr5_45249948_45701380	45682290	C C	CATATATA others(23): Show CATATATATATATATACATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01891.hp1 HG02055.hp1 others(3): Show HG01261.hp2 HG01891.hp1 HG02055.hp1 HG02717.hp1 HG03579.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0122 a0001c0001t0005g0123 a0001c0001t0005g0124 others(3): Show a0001c0001t0005g0122 a0001c0001t0005g0123 a0001c0001t0005g0124 a0001c0001t0005g0125 a0001c0001t0005g0126 a0001c0001t0005g0127	6	226	0.0266	30	c.425 others(49): Show c.425+13378_425+13379insATATATATATATATGTATATATATAT ATAT	HCN1	ENSG00000164588.8	transcript	ENST00000303230.6	protein_coding	1/7			chr5	TogoVar
HCN4_chr15_73314859_73373958	73316252	A A	AATATATA others(23): Show AATATATATATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00741.hp2 NA18961.hp1 NA20300.hp1 HG00741.hp2 NA18961.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0002 a0001c0003t0001 a0001c0001t0002 a0001c0003t0001	a0001c0001t0002g0190 a0001c0001t0002g0221 a0001c0003t0001g0049 a0001c0001t0002g0190 a0001c0001t0002g0221 a0001c0003t0001g0049	3	344	0.0087	30	c.62 others(41): Show c.6228_*6229insATATATATATATATATATATATATATATAT	HCN4	ENSG00000138622.4	transcript	ENST00000261917.4	protein_coding		3606		chr15	TogoVar
HCN4_chr15_73314859_73373958	73373755	G G	GAAAGAAA others(23): Show GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0021 a0001c0001t0021	a0001c0001t0021g0243 a0001c0001t0021g0243	1	344	0.0029	30	c.-54 others(41): Show c.-5486_-5485insTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	HCN4	ENSG00000138622.4	transcript	ENST00000261917.4	protein_coding		4798		chr15	TogoVar
HCRTR2_chr6_55169515_55287617	55245469	T T	TTATATAT others(23): Show TTATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01952.hp1 HG02976.hp1 HG01952.hp1 HG02976.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0002 a0001c0001t0001 a0001c0003t0002	a0001c0001t0001g0072 a0001c0003t0002g0327 a0001c0001t0001g0072 a0001c0003t0002g0327	2	368	0.0054	30	c.224 others(47): Show c.224-3162_224-3133dupATATATATATATATATATATATATATAT AT	HCRTR2	ENSG00000137252.10	transcript	ENST00000370862.4	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr6	TogoVar
HCRTR2_chr6_55169515_55287617	55274278	C C	CATATATT others(23): Show CATATATTTTATGAAATATATATACTTATAT	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00438.hp2 HG00597.hp1 others(63): Show HG00323.hp1 HG00438.hp2 HG00597.hp1 HG00597.hp2 HG00642.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG01074.hp2 HG01081.hp1 HG01099.hp1 HG01099.hp2 HG01123.hp1 HG01168.hp2 HG01346.hp2 HG01515.hp2 HG01934.hp2 HG01978.hp1 HG01993.hp2 HG02015.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp2 HG02083.hp2 HG02129.hp2 HG02148.hp2 HG02165.hp2 HG02300.hp2 HG02486.hp1 HG02602.hp2 HG02683.hp1 HG03017.hp1 HG03491.hp2 HG03710.hp2 HG03942.hp2 HG04199.hp1 HG04199.hp2 NA18941.hp2 NA18942.hp1 NA18951.hp1 NA18959.hp2 NA18961.hp1 NA18965.hp1 NA18968.hp1 NA18969.hp1 NA18970.hp1 NA18979.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18986.hp1 NA18989.hp1 NA18991.hp1 NA18995.hp2 NA19010.hp2 NA19011.hp1 NA19056.hp2 NA19066.hp1 NA19074.hp1 NA19079.hp1 NA19081.hp2 NA19086.hp1 NA19240.hp2 NA20805.hp2	a0001 a0005 a0006 others(2): Show a0001 a0005 a0006 a0007 a0009	a0001c0001 a0005c0006 a0006c0009 others(2): Show a0001c0001 a0005c0006 a0006c0009 a0007c0007 a0009c0013	a0001c0001t0001 a0001c0001t0003 a0005c0006t0001 others(3): Show a0001c0001t0001 a0001c0001t0003 a0005c0006t0001 a0006c0009t0001 a0007c0007t0001 a0009c0013t0001	a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 others(63): Show a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0027 a0001c0001t0001g0046 a0001c0001t0001g0051 a0001c0001t0001g0060 a0001c0001t0001g0062 a0001c0001t0001g0075 a0001c0001t0001g0088 a0001c0001t0001g0090 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0118 a0001c0001t0001g0124 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0129 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0146 a0001c0001t0001g0161 a0001c0001t0001g0166 a0001c0001t0001g0198 a0001c0001t0001g0216 a0001c0001t0001g0220 a0001c0001t0001g0227 a0001c0001t0001g0240 a0001c0001t0001g0275 a0001c0001t0001g0277 a0001c0001t0001g0279 a0001c0001t0001g0280 a0001c0001t0001g0285 a0001c0001t0001g0286 a0001c0001t0001g0288 a0001c0001t0001g0291 a0001c0001t0001g0294 a0001c0001t0001g0295 a0001c0001t0001g0296 a0001c0001t0001g0297 a0001c0001t0001g0298 a0001c0001t0001g0299 a0001c0001t0001g0300 a0001c0001t0001g0301 a0001c0001t0001g0302 a0001c0001t0001g0310 a0001c0001t0001g0312 a0001c0001t0001g0313 a0001c0001t0001g0316 a0001c0001t0001g0324 a0001c0001t0001g0345 a0001c0001t0001g0347 a0001c0001t0001g0353 a0001c0001t0001g0354 a0001c0001t0003g0041 a0005c0006t0001g0315 a0006c0009t0001g0346 a0007c0007t0001g0303 a0009c0013t0001g0140	66	368	0.1794	30	c.763 others(47): Show c.763-3055_763-3026dupATATATACTTATATATATATTTTATGAA AT	HCRTR2	ENSG00000137252.10	transcript	ENST00000370862.4	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr6	TogoVar
HDAC10_chr22_50240183_50256265	50243632	A A	AAAAAAGA others(23): Show AAAAAAGAAGAAGAAGAAGAAGAAGAAGAAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0006 a0006	a0006c0018 a0006c0018	a0006c0018t0001 a0006c0018t0001	a0006c0018t0001g0058 a0006c0018t0001g0058	1	448	0.0022	30	c.18 others(41): Show c.1874_*1875insCTTCTTCTTCTTCTTCTTCTTCTTCTTTTT	HDAC10	ENSG00000100429.18	transcript	ENST00000216271.10	protein_coding		1550		chr22	TogoVar
HDAC1_chr1_32287083_32338626	32290799	G G	GGCACAGA others(23): Show GGCACAGAACAGCTTCACAGAAGCTGTTAAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0040 a0001c0001t0001g0040	1	146	0.0069	30	c.-13 others(41): Show c.-1371_-1370insGCACAGAACAGCTTCACAGAAGCTGTTAAT	HDAC1	ENSG00000116478.12	transcript	ENST00000373548.8	protein_coding		1283		chr1	TogoVar
HDAC2_chr6_113928028_113976148	113930729	T T	TCTCTCTC others(23): Show TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01993.hp2 HG01993.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0031 a0001c0001t0004g0031	1	402	0.0025	30	c.10 others(43): Show c.10328_*10329insGGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	HDAC2	ENSG00000196591.12	transcript	ENST00000519065.6	protein_coding		2298		chr6	TogoVar
HDAC2_chr6_113928028_113976148	113930739	T T	TCTCTCTC others(23): Show TCTCTCTCTCTCTCTCTCTCTCCCTCTCTCC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01952.hp2 HG01952.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0031 a0001c0001t0004g0031	1	402	0.0025	30	c.10 others(43): Show c.10318_*10319insGGAGAGAGGGAGAGAGAGAGAGAGAGAGAG	HDAC2	ENSG00000196591.12	transcript	ENST00000519065.6	protein_coding		2288		chr6	TogoVar

Search by Variant

Search

Search Results