Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LAX1_chr1_203760183_203781372	203770454	A A	AGAGAGAG others(25): Show AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGG	intron_variant intron_variant	MODIFIER	HG03654.hp2 HG03654.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0301 a0001c0001t0001g0301	1	422	0.0024	32	c.90- others(45): Show c.90-374_90-373insGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGG	LAX1	ENSG00000122188.13	transcript	ENST00000442561.7	protein_coding	1/4			chr1	TogoVar
LCA5L_chr21_39400728_39450778	39428598	A A	ATATATAT others(25): Show ATATATATATATATATATATATATATATATATT	intron_variant intron_variant	MODIFIER	NA19001.hp2 NA19006.hp2 NA20752.hp2 NA19001.hp2 NA19006.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0062 a0001c0001t0001g0117 a0001c0001t0001g0161 a0001c0001t0001g0062 a0001c0001t0001g0117 a0001c0001t0001g0161	3	340	0.0088	32	c.-10 others(45): Show c.-10-96_-10-95insAATATATATATATATATATATATATATATATA	LCA5L	ENSG00000157578.14	transcript	ENST00000288350.8	protein_coding	4/10			chr21	TogoVar
LCE1A_chr1_152822473_152833097	152825347	G G	GTGTGTAT others(25): Show GTGTGTATATACATATATATGTACATACATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02970.hp2 HG03139.hp2 HG03490.hp2 others(1): Show HG02970.hp2 HG03139.hp2 HG03490.hp2 HG04228.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	4	414	0.0097	32	c.-21 others(43): Show c.-2126_-2125insTGTGTATATACATATATATGTACATACATATA	LCE1A	ENSG00000186844.6	transcript	ENST00000335123.4	protein_coding		2125		chr1	TogoVar
LCE1A_chr1_152822473_152833097	152825360	T T	TATATATG others(25): Show TATATATGTACATACATATATGTGTATATACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01433.hp1 HG02109.hp1 HG02280.hp1 others(5): Show HG01433.hp1 HG02109.hp1 HG02280.hp1 HG02559.hp2 HG02572.hp1 HG03471.hp1 HG03471.hp2 NA19240.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0000 a0001c0002t0001g0000	8	414	0.0193	32	c.-21 others(43): Show c.-2113_-2112insATATATGTACATACATATATGTGTATATACAC	LCE1A	ENSG00000186844.6	transcript	ENST00000335123.4	protein_coding		2112		chr1	TogoVar
LCE1A_chr1_152822473_152833097	152825360	T T	TATATATG others(25): Show TATATATGTACGTACATATATGTGTATATACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0000 a0001c0002t0001g0000	1	414	0.0024	32	c.-21 others(43): Show c.-2113_-2112insATATATGTACGTACATATATGTGTATATACAC	LCE1A	ENSG00000186844.6	transcript	ENST00000335123.4	protein_coding		2112		chr1	TogoVar
LCMT2_chr15_43318649_43335573	43334633	T T	TTATATAT others(25): Show TTATATATATATATATATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00735.hp2 HG01358.hp2 HG02004.hp1 others(2): Show HG00735.hp2 HG01358.hp2 HG02004.hp1 HG03654.hp1 NA18970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004	a0001c0001t0002g0000 a0001c0001t0003g0000 a0001c0001t0004g0000 a0001c0001t0002g0000 a0001c0001t0003g0000 a0001c0001t0004g0000	5	410	0.0122	32	c.-41 others(43): Show c.-4145_-4144insTATATATATATATATATATATATATATATATA	LCMT2	ENSG00000168806.8	transcript	ENST00000305641.7	protein_coding		4061		chr15	TogoVar
LCOR_chr10_96827298_97000956	96870140	T T	TGCCTCCT others(25): Show TGCCTCCTGGGTTCAGGCCATTCTCCTGCCTCA	intron_variant intron_variant	MODIFIER	HG01884.hp1 NA20300.hp2 HG01884.hp1 NA20300.hp2	a0007 a0007	a0007c0013 a0007c0013	a0007c0013t0080 a0007c0013t0141 a0007c0013t0080 a0007c0013t0141	a0007c0013t0080g0174 a0007c0013t0141g0175 a0007c0013t0080g0174 a0007c0013t0141g0175	2	288	0.0069	32	c.-33 others(53): Show c.-330+36669_-330+36670insGGTTCAGGCCATTCTCCTGCCTCA GCCTCCTG	LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr10	TogoVar
LCOR_chr10_96827298_97000956	96912607	T T	TCTTCCTT others(25): Show TCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02717.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0038 a0001c0001t0038	a0001c0001t0038g0060 a0001c0001t0038g0060	1	288	0.0035	32	c.-18 others(51): Show c.-184+4868_-184+4899dupCCTTCCTTCCTTCCTTCCTTCCTTCC TTCCTT	LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	4/7		INFO_REALIGN_3_PRIME	chr10	TogoVar
LCOR_chr10_96827298_97000956	96989695	A A	ATATATAT others(25): Show ATATATATATATATATATATATATATATATTTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0005 a0005	a0005c0006 a0005c0006	a0005c0006t0040 a0005c0006t0040	a0005c0006t0040g0288 a0005c0006t0040g0288	1	288	0.0035	32	c.45 others(43): Show c.4562_*4563insATATATATATATATATATATATATATATTTTT	LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	8/8	4563	INFO_REALIGN_3_PRIME	chr10	TogoVar
LCP1_chr13_46120923_46187177	46121514	G G	GAGATCTG others(25): Show GAGATCTGGAAAATGTGTTTTAATAAGCTCCCC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01109.hp2 HG01109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0022	a0001c0001t0022g0133 a0001c0001t0022g0133	1	382	0.0026	32	c.60 others(43): Show c.6076_*6077insGGGGAGCTTATTAAAACACATTTTCCAGATCT	LCP1	ENSG00000136167.15	transcript	ENST00000323076.7	protein_coding		4408		chr13	TogoVar
LDAH_chr2_20679031_20828101	20716720	G G	GTATATAT others(25): Show GTATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01952.hp2 HG02559.hp2 HG03927.hp2 HG01952.hp2 HG02559.hp2 HG03927.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006	a0001c0001t0003g0082 a0001c0001t0005g0051 a0001c0001t0006g0239 a0001c0001t0003g0082 a0001c0001t0005g0051 a0001c0001t0006g0239	3	258	0.0116	32	c.704 others(51): Show c.704-15069_704-15068insTATATATATATATATATATATATATA TATATA	LDAH	ENSG00000118961.15	transcript	ENST00000237822.8	protein_coding	5/6			chr2	TogoVar
LDB2_chr4_16496541_16903645	16659671	G G	GTGTGTAT others(25): Show GTGTGTATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02300.hp1 NA19070.hp2 HG02300.hp1 NA19070.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0067 a0001c0001t0003g0091 a0001c0001t0001g0067 a0001c0001t0003g0091	2	162	0.0124	32	c.236 others(51): Show c.236-63797_236-63796insTATATATATATATATATATATATATA TACACA	LDB2	ENSG00000169744.13	transcript	ENST00000304523.10	protein_coding	2/7			chr4	TogoVar
LDB2_chr4_16496541_16903645	16659671	G G	GTGTGTGT others(25): Show GTGTGTGTATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00438.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0059 a0001c0001t0001g0059	1	162	0.0062	32	c.236 others(51): Show c.236-63797_236-63796insTATATATATATATATATATATATATA CACACA	LDB2	ENSG00000169744.13	transcript	ENST00000304523.10	protein_coding	2/7			chr4	TogoVar
LDB2_chr4_16496541_16903645	16690459	C C	CAGGAAGG others(25): Show CAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	intron_variant intron_variant	MODIFIER	HG01071.hp2 HG02055.hp2 HG02083.hp2 others(1): Show HG01071.hp2 HG02055.hp2 HG02083.hp2 NA19056.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0005 a0001c0001t0001g0082 a0001c0001t0003g0083 others(1): Show a0001c0001t0001g0005 a0001c0001t0001g0082 a0001c0001t0003g0083 a0001c0001t0003g0116	4	162	0.0247	32	c.235 others(51): Show c.235+68698_235+68699insTCCTTCCTTCCTTCCTTCCTTCCTTC CTTCCT	LDB2	ENSG00000169744.13	transcript	ENST00000304523.10	protein_coding	2/7			chr4	TogoVar
LDLRAD3_chr11_35939062_36237136	36128117	C C	CATATATA others(25): Show CATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01175.hp1 HG01952.hp2 others(6): Show HG01167.hp1 HG01175.hp1 HG01952.hp2 HG02602.hp1 HG03195.hp1 HG03195.hp2 HG03516.hp2 HG03669.hp2 NA19087.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0002c0003 others(1): Show a0001c0001 a0001c0002 a0002c0003 a0003c0005	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(4): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0019 a0001c0002t0001 a0002c0003t0002 a0003c0005t0004	a0001c0001t0001g0046 a0001c0001t0001g0056 a0001c0001t0003g0109 others(6): Show a0001c0001t0001g0046 a0001c0001t0001g0056 a0001c0001t0003g0109 a0001c0001t0005g0044 a0001c0001t0019g0098 a0001c0002t0001g0072 a0002c0003t0002g0225 a0003c0005t0004g0093 a0003c0005t0004g0209	9	236	0.0381	32	c.454 others(51): Show c.454+29674_454+29675insATATATATATATATATATATATATAT ATATAT	LDLRAD3	ENSG00000179241.13	transcript	ENST00000315571.6	protein_coding	4/5		INFO_REALIGN_3_PRIME	chr11	TogoVar
LDLRAD3_chr11_35939062_36237136	36165976	C C	CCCTCCCT others(25): Show CCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTT	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0019 a0001c0002t0004g0019	1	236	0.0042	32	c.455 others(51): Show c.455-61106_455-61105insCCCTCCCTCCCTCCCTTCCTTCCTTC CTTCCT	LDLRAD3	ENSG00000179241.13	transcript	ENST00000315571.6	protein_coding	4/5		INFO_REALIGN_3_PRIME	chr11	TogoVar
LDLRAD4_chr18_13213760_13657751	13262205	C C	CGTGTGGC others(25): Show CGTGTGGCTCTGTGTGCCTGGGGGATGAGTCCT	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02615.hp1 HG02622.hp2 HG02486.hp2 HG02615.hp1 HG02622.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0056 a0001c0001t0002 a0001c0001t0004 a0001c0001t0056	a0001c0001t0002g0058 a0001c0001t0004g0057 a0001c0001t0056g0059 a0001c0001t0002g0058 a0001c0001t0004g0057 a0001c0001t0056g0059	3	178	0.0169	32	c.-46 others(53): Show c.-466-15884_-466-15853dupCCTGGGGGATGAGTCCTGTGTGGC TCTGTGTG	LDLRAD4	ENSG00000168675.19	transcript	ENST00000359446.11	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr18	TogoVar
LDLRAD4_chr18_13213760_13657751	13578827	C C	CTTTTTTT others(25): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03831.hp1 HG03831.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0025 a0001c0001t0007g0025	1	178	0.0056	32	c.182 others(51): Show c.182-42262_182-42261insTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTT	LDLRAD4	ENSG00000168675.19	transcript	ENST00000359446.11	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr18	TogoVar
LEF1_chr4_108042548_108173932	108149458	C C	CAAAAAAA others(25): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01255.hp1 HG02280.hp1 others(1): Show HG01109.hp2 HG01255.hp1 HG02280.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0260 others(1): Show a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0260 a0001c0001t0003g0244	4	264	0.0152	32	c.414 others(51): Show c.414+14109_414+14110insTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTT	LEF1	ENSG00000138795.10	transcript	ENST00000265165.6	protein_coding	3/11			chr4	TogoVar
LEMD3_chr12_65164583_65253355	65180989	A A	AACACACA others(25): Show AACACACACACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG02895.hp2 HG02896.hp2 others(1): Show HG02809.hp2 HG02895.hp2 HG02896.hp2 HG02922.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0028 a0001c0001t0005g0029 a0001c0001t0005g0030 others(1): Show a0001c0001t0005g0028 a0001c0001t0005g0029 a0001c0001t0005g0030 a0001c0001t0005g0031	4	398	0.0101	32	c.152 others(51): Show c.1522+9892_1522+9893insCACACACACACACACACACACACACA CACACA	LEMD3	ENSG00000174106.3	transcript	ENST00000308330.3	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr12	TogoVar
LEMD3_chr12_65164583_65253355	65194848	G G	GATTATAA others(25): Show GATTATAATTTATAAATTATAATTTAGATTATA	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00323.hp2 HG00558.hp2 others(123): Show HG00323.hp1 HG00323.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00639.hp2 HG00673.hp1 HG00673.hp2 HG00738.hp1 HG00741.hp1 HG01081.hp1 HG01109.hp1 HG01123.hp1 HG01169.hp2 HG01175.hp1 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01496.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01891.hp1 HG01928.hp1 HG01978.hp2 HG02027.hp1 HG02027.hp2 HG02056.hp1 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02135.hp2 HG02155.hp1 HG02165.hp2 HG02300.hp1 HG02523.hp1 HG02523.hp2 HG02602.hp2 HG02735.hp1 HG03209.hp1 HG03239.hp1 HG03490.hp1 HG03491.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp2 HG03831.hp1 HG04115.hp1 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04228.hp1 NA18612.hp2 NA18747.hp1 NA18939.hp2 NA18940.hp1 NA18942.hp1 NA18943.hp1 NA18945.hp1 NA18946.hp2 NA18949.hp1 NA18950.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18954.hp2 NA18956.hp1 NA18959.hp1 NA18959.hp2 NA18960.hp2 NA18962.hp1 NA18963.hp1 NA18965.hp2 NA18968.hp1 NA18969.hp2 NA18971.hp1 NA18971.hp2 NA18974.hp1 NA18977.hp2 NA18978.hp2 NA18982.hp1 NA18984.hp1 NA18988.hp1 NA18989.hp1 NA18990.hp2 NA18992.hp1 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18998.hp1 NA18998.hp2 NA18999.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp2 NA19007.hp1 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19054.hp1 NA19054.hp2 NA19055.hp2 NA19056.hp2 NA19060.hp2 NA19062.hp1 NA19064.hp2 NA19065.hp1 NA19066.hp1 NA19068.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19074.hp2 NA19076.hp2 NA19077.hp1 NA19079.hp2 NA19080.hp1 NA20752.hp1 NA20805.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0001t0009 a0001c0001t0010 others(1): Show a0001c0001t0001 a0001c0001t0009 a0001c0001t0010 a0001c0005t0001	a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0011 others(115): Show a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0026 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0198 a0001c0001t0001g0199 a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0223 a0001c0001t0001g0224 a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0001g0230 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0235 a0001c0001t0001g0236 a0001c0001t0001g0237 a0001c0001t0001g0238 a0001c0001t0001g0239 a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0001g0242 a0001c0001t0001g0243 a0001c0001t0001g0244 a0001c0001t0001g0245 a0001c0001t0001g0246 a0001c0001t0001g0247 a0001c0001t0001g0248 a0001c0001t0001g0249 a0001c0001t0001g0250 a0001c0001t0001g0251 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0255 a0001c0001t0001g0257 a0001c0001t0001g0258 a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0001g0261 a0001c0001t0001g0264 a0001c0001t0001g0265 a0001c0001t0001g0266 a0001c0001t0001g0267 a0001c0001t0001g0268 a0001c0001t0001g0269 a0001c0001t0001g0270 a0001c0001t0001g0273 a0001c0001t0001g0274 a0001c0001t0001g0276 a0001c0001t0001g0349 a0001c0001t0001g0352 a0001c0001t0009g0275 a0001c0001t0010g0153 a0001c0005t0001g0231 a0001c0005t0001g0256 a0001c0005t0001g0262 a0001c0005t0001g0263	126	398	0.3166	32	c.152 others(53): Show c.1523-16074_1523-16043dupATAATTTATAAATTATAATTTAGA TTATAATT	LEMD3	ENSG00000174106.3	transcript	ENST00000308330.3	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr12	TogoVar
LEPROT_chr1_65415668_65441007	65417065	C C	CATATATA others(25): Show CATATATATATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00558.hp1 HG00621.hp2 HG01074.hp1 others(16): Show HG00558.hp1 HG00621.hp2 HG01074.hp1 HG01255.hp2 HG02074.hp2 HG02135.hp2 HG02683.hp1 HG03130.hp1 HG03490.hp1 HG03492.hp2 NA18906.hp1 NA18952.hp1 NA18956.hp1 NA18959.hp2 NA18993.hp1 NA18995.hp1 NA19005.hp2 NA19030.hp1 NA19081.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(5): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0008 a0001c0001t0013 a0001c0001t0024 a0001c0002t0001 a0001c0002t0043	a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0058 others(8): Show a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0058 a0001c0001t0003g0005 a0001c0001t0004g0032 a0001c0001t0004g0088 a0001c0001t0008g0020 a0001c0001t0013g0105 a0001c0001t0024g0138 a0001c0002t0001g0001 a0001c0002t0043g0001	19	402	0.0473	32	c.-36 others(43): Show c.-3660_-3659insATATATATATATATATATATATATATATATAT	LEPROT	ENSG00000213625.9	transcript	ENST00000371065.9	protein_coding		3602		chr1	TogoVar
LEPR_chr1_65415668_65646559	65417065	C C	CATATATA others(25): Show CATATATATATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00558.hp1 HG00621.hp2 HG01074.hp1 others(4): Show HG00558.hp1 HG00621.hp2 HG01074.hp1 HG01255.hp2 NA18906.hp1 NA19030.hp1 NA19081.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0009	a0001c0001 a0002c0002 a0002c0010 others(3): Show a0001c0001 a0002c0002 a0002c0010 a0003c0004 a0003c0005 a0009c0018	a0001c0001t0031 a0002c0002t0001 a0002c0010t0016 others(3): Show a0001c0001t0031 a0002c0002t0001 a0002c0010t0016 a0003c0004t0041 a0003c0005t0032 a0009c0018t0004	a0001c0001t0031g0018 a0002c0002t0001g0044 a0002c0002t0001g0046 others(4): Show a0001c0001t0031g0018 a0002c0002t0001g0044 a0002c0002t0001g0046 a0002c0010t0016g0041 a0003c0004t0041g0206 a0003c0005t0032g0007 a0009c0018t0004g0107	7	216	0.0324	32	c.-37 others(43): Show c.-3772_-3771insATATATATATATATATATATATATATATATAT	LEPR	ENSG00000116678.20	transcript	ENST00000349533.11	protein_coding		3602		chr1	TogoVar
LEPR_chr1_65415668_65646559	65488159	C C	CCTTCCTT others(25): Show CCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0006 a0001c0008t0006	a0001c0008t0006g0078 a0001c0008t0006g0078	1	216	0.0046	32	c.-21 others(51): Show c.-21+62784_-21+62785insCCTTCCTTCCTTCCTTCCTTTCTTTC TTTCTT	LEPR	ENSG00000116678.20	transcript	ENST00000349533.11	protein_coding	2/19		INFO_REALIGN_3_PRIME	chr1	TogoVar
LEPR_chr1_65415668_65646559	65488159	C C	CCTTCCTT others(25): Show CCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG03831.hp1 HG03831.hp1	a0003 a0003	a0003c0006 a0003c0006	a0003c0006t0005 a0003c0006t0005	a0003c0006t0005g0109 a0003c0006t0005g0109	1	216	0.0046	32	c.-21 others(51): Show c.-21+62784_-21+62785insCCTTCCTTCCTTCCTTTCTTTCTTTC TTTCTT	LEPR	ENSG00000116678.20	transcript	ENST00000349533.11	protein_coding	2/19		INFO_REALIGN_3_PRIME	chr1	TogoVar
LEPR_chr1_65415668_65646559	65488210	T T	TTCTTTCT others(25): Show TTCTTTCTTTCTTTCTCTCTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG01168.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0074 a0001c0001t0003g0074	1	216	0.0046	32	c.-21 others(51): Show c.-21+62835_-21+62836insTTCTTTCTTTCTCTCTCTCTCTCTCT CTCTCT	LEPR	ENSG00000116678.20	transcript	ENST00000349533.11	protein_coding	2/19		INFO_REALIGN_3_PRIME	chr1	TogoVar
LEPR_chr1_65415668_65646559	65488222	C C	CTCTTTCT others(25): Show CTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	intron_variant intron_variant	MODIFIER	HG02129.hp1 HG02129.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0006 a0003c0004t0006	a0003c0004t0006g0082 a0003c0004t0006g0082	1	216	0.0046	32	c.-21 others(51): Show c.-21+62847_-21+62848insTTCTTTCTTTCTTTCTTTCTTTCTTT CTTTCT	LEPR	ENSG00000116678.20	transcript	ENST00000349533.11	protein_coding	2/19		INFO_REALIGN_3_PRIME	chr1	TogoVar
LEPR_chr1_65415668_65646559	65488232	C C	CTCTTTCT others(25): Show CTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG01515.hp1 HG02145.hp2 others(5): Show HG00609.hp2 HG01515.hp1 HG02145.hp2 HG02451.hp1 HG02523.hp1 HG02922.hp2 NA19043.hp2 NA20805.hp2	a0001 a0003 a0005 a0001 a0003 a0005	a0001c0001 a0003c0006 a0005c0007 others(1): Show a0001c0001 a0003c0006 a0005c0007 a0005c0012	a0001c0001t0009 a0001c0001t0033 a0001c0001t0043 others(3): Show a0001c0001t0009 a0001c0001t0033 a0001c0001t0043 a0003c0006t0005 a0005c0007t0003 a0005c0012t0002	a0001c0001t0009g0089 a0001c0001t0033g0069 a0001c0001t0043g0174 others(5): Show a0001c0001t0009g0089 a0001c0001t0033g0069 a0001c0001t0043g0174 a0003c0006t0005g0162 a0005c0007t0003g0098 a0005c0007t0003g0099 a0005c0007t0003g0101 a0005c0012t0002g0176	8	216	0.0370	32	c.-21 others(51): Show c.-21+62855_-21+62856insCTTTCTTTCTTTCTTTCTTTCTTTCT TTCTTT	LEPR	ENSG00000116678.20	transcript	ENST00000349533.11	protein_coding	2/19		INFO_REALIGN_3_PRIME	chr1	TogoVar
LEUTX_chr19_39773854_39791291	39789487	G G	GATATATA others(25): Show GATATATATATATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA20129.hp2 NA20300.hp2 NA20129.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0049 a0001c0001t0002g0106 a0001c0001t0002g0049 a0001c0001t0002g0106	2	476	0.0042	32	c.33 others(43): Show c.3352_*3353insATATATATATATATATATATATATATATATAT	LEUTX	ENSG00000213921.8	transcript	ENST00000638280.2	protein_coding		3197		chr19	TogoVar
LEXM_chr1_54801063_54847252	54819812	T T	TTTTCTTT others(25): Show TTTTCTTTCTCTTTCTTTCTTTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00558.hp2 HG00621.hp2 others(33): Show HG00099.hp2 HG00558.hp2 HG00621.hp2 HG00735.hp1 HG01106.hp2 HG01192.hp1 HG01243.hp2 HG01256.hp1 HG01361.hp1 HG01515.hp2 HG02004.hp2 HG02135.hp1 HG02148.hp1 HG02165.hp2 HG02300.hp1 HG02922.hp1 HG03453.hp1 HG03654.hp1 NA18946.hp2 NA18948.hp1 NA18951.hp2 NA18953.hp1 NA18956.hp1 NA18960.hp2 NA18968.hp2 NA18980.hp2 NA18983.hp2 NA18988.hp1 NA18995.hp2 NA18999.hp1 NA19001.hp1 NA19002.hp2 NA19012.hp2 NA19056.hp2 NA19082.hp1 NA19085.hp2	a0001 a0002 a0006 a0001 a0002 a0006	a0001c0003 a0001c0004 a0002c0005 others(1): Show a0001c0003 a0001c0004 a0002c0005 a0006c0014	a0001c0003t0003 a0001c0003t0008 a0001c0004t0003 others(2): Show a0001c0003t0003 a0001c0003t0008 a0001c0004t0003 a0002c0005t0004 a0006c0014t0003	a0001c0003t0003g0003 a0001c0003t0003g0004 a0001c0003t0003g0019 others(17): Show a0001c0003t0003g0003 a0001c0003t0003g0004 a0001c0003t0003g0019 a0001c0003t0003g0021 a0001c0003t0003g0022 a0001c0003t0003g0057 a0001c0003t0003g0224 a0001c0003t0003g0225 a0001c0003t0003g0232 a0001c0003t0003g0236 a0001c0003t0003g0239 a0001c0003t0003g0240 a0001c0003t0003g0244 a0001c0003t0003g0245 a0001c0003t0008g0226 a0001c0004t0003g0191 a0002c0005t0004g0030 a0002c0005t0004g0070 a0002c0005t0004g0082 a0006c0014t0003g0048	36	382	0.0942	32	c.118 others(51): Show c.1184+2699_1184+2700insCTTTCTTTCTTTTTCTTTCTTTCTTT CTTTCT	LEXM	ENSG00000162398.12	transcript	ENST00000371273.4	protein_coding	9/9		INFO_REALIGN_3_PRIME	chr1	TogoVar
LGALS3_chr14_55124252_55150423	55143843	C C	CAAATCTT others(25): Show CAAATCTTTGCTTCCTAGAAGCAAGTCTTCTAG	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00280.hp2 HG00323.hp1 others(107): Show HG00140.hp2 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00642.hp2 HG00735.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp1 HG01074.hp1 HG01081.hp2 HG01106.hp1 HG01109.hp2 HG01169.hp1 HG01175.hp1 HG01258.hp1 HG01346.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp2 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01928.hp2 HG01934.hp2 HG01978.hp1 HG02071.hp1 HG02135.hp2 HG02145.hp1 HG02155.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02486.hp1 HG02622.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02735.hp1 HG02738.hp2 HG02886.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG03139.hp1 HG03209.hp2 HG03225.hp2 HG03453.hp1 HG03486.hp2 HG03490.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03704.hp1 HG03710.hp2 HG03831.hp2 HG03942.hp2 HG04184.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 NA18522.hp1 NA18906.hp1 NA18906.hp2 NA18943.hp2 NA18947.hp2 NA18952.hp1 NA18960.hp2 NA18961.hp1 NA18963.hp2 NA18975.hp1 NA18980.hp2 NA18981.hp1 NA18982.hp1 NA18995.hp2 NA19001.hp2 NA19003.hp1 NA19010.hp1 NA19012.hp2 NA19030.hp1 NA19055.hp1 NA19057.hp2 NA19064.hp1 NA19065.hp1 NA19066.hp1 NA19070.hp1 NA19072.hp1 NA19080.hp2 NA19081.hp2 NA19083.hp2 NA19085.hp1 NA19089.hp1 NA19090.hp1 NA20300.hp1 NA20752.hp1 NA20905.hp2	a0002 a0003 a0004 a0002 a0003 a0004	a0002c0002 a0003c0003 a0004c0004 a0002c0002 a0003c0003 a0004c0004	a0002c0002t0001 a0003c0003t0001 a0004c0004t0001 a0002c0002t0001 a0003c0003t0001 a0004c0004t0001	a0002c0002t0001g0009 a0002c0002t0001g0046 a0002c0002t0001g0047 others(51): Show a0002c0002t0001g0009 a0002c0002t0001g0046 a0002c0002t0001g0047 a0002c0002t0001g0132 a0002c0002t0001g0133 a0002c0002t0001g0134 a0002c0002t0001g0135 a0002c0002t0001g0136 a0002c0002t0001g0137 a0002c0002t0001g0139 a0002c0002t0001g0140 a0002c0002t0001g0142 a0002c0002t0001g0143 a0002c0002t0001g0159 a0002c0002t0001g0164 a0003c0003t0001g0003 a0003c0003t0001g0008 a0003c0003t0001g0011 a0003c0003t0001g0019 a0003c0003t0001g0031 a0003c0003t0001g0032 a0003c0003t0001g0040 a0003c0003t0001g0041 a0003c0003t0001g0042 a0003c0003t0001g0053 a0003c0003t0001g0054 a0003c0003t0001g0104 a0003c0003t0001g0105 a0003c0003t0001g0106 a0003c0003t0001g0108 a0003c0003t0001g0110 a0003c0003t0001g0113 a0003c0003t0001g0115 a0003c0003t0001g0119 a0003c0003t0001g0120 a0003c0003t0001g0121 a0003c0003t0001g0122 a0003c0003t0001g0123 a0003c0003t0001g0124 a0003c0003t0001g0127 a0003c0003t0001g0128 a0003c0003t0001g0129 a0003c0003t0001g0130 a0003c0003t0001g0151 a0003c0003t0001g0152 a0003c0003t0001g0153 a0003c0003t0001g0154 a0003c0003t0001g0155 a0004c0004t0001g0010 a0004c0004t0001g0023 a0004c0004t0001g0049 a0004c0004t0001g0050 a0004c0004t0001g0051 a0004c0004t0001g0052	110	376	0.2926	32	c.597 others(49): Show c.597+1171_598-1165dupCCTAGAAGCAAGTCTTCTAGAAATCTTT GCTT	LGALS3	ENSG00000131981.16	transcript	ENST00000254301.14	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LHFPL3_chr7_104323603_104913561	104365787	C C	CAAAAAAA others(25): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0064 a0001c0001t0001g0064	1	86	0.0116	32	c.445 others(51): Show c.445+36581_445+36582insAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAA	LHFPL3	ENSG00000187416.13	transcript	ENST00000424859.7	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr7	TogoVar
LHFPL3_chr7_104323603_104913561	104365787	C C	CAAAAAAA others(25): Show CAAAAAAAATAAATAAATAAATAAATAAAATAA	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG01070.hp1 HG01258.hp2 others(3): Show HG00558.hp2 HG01070.hp1 HG01258.hp2 HG02293.hp2 HG02300.hp1 HG03017.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0013	a0001c0001t0001g0060 a0001c0001t0002g0059 a0001c0001t0002g0061 others(3): Show a0001c0001t0001g0060 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0003g0058 a0001c0001t0004g0082 a0001c0001t0013g0049	6	86	0.0698	32	c.445 others(51): Show c.445+36571_445+36572insTAAATAAATAAATAAATAAAATAAAA AAAAAA	LHFPL3	ENSG00000187416.13	transcript	ENST00000424859.7	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr7	TogoVar
LHFPL3_chr7_104323603_104913561	104430423	T T	TGTATATA others(25): Show TGTATATATATATATATATGTATATATATATAC	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0012 a0001c0002t0012	a0001c0002t0012g0010 a0001c0002t0012g0010	1	86	0.0116	32	c.445 others(53): Show c.445+101199_445+101200insGTATATATATATATATATGTATAT ATATATAC	LHFPL3	ENSG00000187416.13	transcript	ENST00000424859.7	protein_coding	1/2			chr7	TogoVar
LHFPL4_chr3_9493361_9558822	9557420	G G	GGAAAGAA others(25): Show GGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02071.hp1 HG02074.hp1 HG02071.hp1 HG02074.hp1	a0001 a0002 a0001 a0002	a0001c0003 a0002c0005 a0001c0003 a0002c0005	a0001c0003t0001 a0002c0005t0001 a0001c0003t0001 a0002c0005t0001	a0001c0003t0001g0211 a0002c0005t0001g0279 a0001c0003t0001g0211 a0002c0005t0001g0279	2	360	0.0056	32	c.-39 others(43): Show c.-3905_-3904insTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	LHFPL4	ENSG00000156959.9	transcript	ENST00000287585.8	protein_coding		3599		chr3	TogoVar
LHFPL5_chr6_35800352_35829070	35821857	A A	ATTTTTTT others(25): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0088 a0001c0001t0088	a0001c0001t0088g0022 a0001c0001t0088g0022	1	386	0.0026	32	c.17 others(49): Show c.17-1122_*17-1091dupTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTT	LHFPL5	ENSG00000197753.11	transcript	ENST00000360215.3	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr6	TogoVar
LHFPL6_chr13_39337892_39608193	39369567	T T	TTTCCTTC others(25): Show TTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG03490.hp2 HG03492.hp1 others(7): Show HG00597.hp2 HG03490.hp2 HG03492.hp1 NA18612.hp2 NA18942.hp2 NA18953.hp1 NA18989.hp2 NA18991.hp1 NA19082.hp1 NA19091.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0009 a0001c0001t0013 others(1): Show a0001c0001t0004 a0001c0001t0009 a0001c0001t0013 a0001c0001t0021	a0001c0001t0004g0001 a0001c0001t0004g0092 a0001c0001t0004g0101 others(6): Show a0001c0001t0004g0001 a0001c0001t0004g0092 a0001c0001t0004g0101 a0001c0001t0004g0144 a0001c0001t0004g0160 a0001c0001t0004g0174 a0001c0001t0009g0055 a0001c0001t0013g0080 a0001c0001t0021g0076	10	242	0.0413	32	c.484 others(49): Show c.484+8829_484+8860dupGGAAGGAAGGAAGGAAGGAAGGAAGGAA GGAA	LHFPL6	ENSG00000183722.9	transcript	ENST00000379589.4	protein_coding	3/3			chr13	TogoVar
LHFPL7_chr22_24930098_24951694	24940636	C C	CCCTTCCT others(25): Show CCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp1 HG00280.hp2 others(31): Show HG00099.hp2 HG00280.hp1 HG00280.hp2 HG01070.hp2 HG01071.hp2 HG01346.hp2 HG01981.hp1 HG02683.hp2 HG02895.hp1 HG02896.hp1 HG03130.hp2 HG03490.hp1 HG03492.hp1 HG03654.hp1 NA18951.hp1 NA18952.hp1 NA18973.hp1 NA18975.hp1 NA18983.hp1 NA18984.hp1 NA18987.hp1 NA18990.hp2 NA19004.hp1 NA19009.hp1 NA19060.hp1 NA19068.hp2 NA19076.hp1 NA19079.hp1 NA19081.hp2 NA19082.hp2 NA19083.hp2 NA19240.hp1 NA20129.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0014 a0001c0001t0001g0048 others(20): Show a0001c0001t0001g0004 a0001c0001t0001g0014 a0001c0001t0001g0048 a0001c0001t0001g0050 a0001c0001t0001g0056 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0160 a0001c0001t0001g0167 a0001c0001t0001g0178 a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0001g0195 a0001c0001t0001g0207 a0001c0001t0001g0223 a0001c0001t0001g0224 a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0001g0234 a0001c0001t0001g0238 a0001c0001t0001g0241 a0001c0001t0001g0242 a0001c0001t0001g0282	34	420	0.0810	32	c.-17 others(49): Show c.-17-1116_-17-1085dupAAGGAAGGAAGGAAGGAAGGAAGGAAGG AAGG	LHFPL7	ENSG00000206069.7	transcript	ENST00000640159.2	protein_coding	1/3			chr22	TogoVar
LHX3_chr9_136191250_136210128	136204332	C C	CGGGTGCA others(25): Show CGGGTGCAAAGCCGAGTGTGTGCGGGCTGTGCT	intron_variant intron_variant	MODIFIER	HG02735.hp2 HG02735.hp2	a0003 a0003	a0003c0007 a0003c0007	a0003c0007t0004 a0003c0007t0004	a0003c0007t0004g0111 a0003c0007t0004g0111	1	438	0.0023	32	c.79+ others(45): Show c.79+570_79+601dupAGCACAGCCCGCACACACTCGGCTTTGCACCC	LHX3	ENSG00000107187.17	transcript	ENST00000371748.10	protein_coding	1/5			chr9	TogoVar
LHX4_chr1_180225264_180283984	180264378	A A	AACACACA others(25): Show AACACACACACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02145.hp2 HG03209.hp2 HG01109.hp1 HG02145.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0036 a0001c0001t0053 a0001c0001t0011 a0001c0001t0036 a0001c0001t0053	a0001c0001t0011g0046 a0001c0001t0036g0122 a0001c0001t0053g0028 a0001c0001t0011g0046 a0001c0001t0036g0122 a0001c0001t0053g0028	3	402	0.0075	32	c.249 others(49): Show c.249-2010_249-1979dupCACACACACACACACACACACACACACA CACA	LHX4	ENSG00000121454.6	transcript	ENST00000263726.4	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr1	TogoVar
LHX5_chr12_113457033_113476871	113461038	C C	CTCTTTCT others(25): Show CTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03453.hp1 HG03834.hp2 NA18972.hp1 others(1): Show HG03453.hp1 HG03834.hp2 NA18972.hp1 NA18983.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0001 a0001c0001t0001g0003	4	396	0.0101	32	c.21 others(43): Show c.2151_*2152insAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA	LHX5	ENSG00000089116.4	transcript	ENST00000261731.4	protein_coding		994		chr12	TogoVar
LIFR_chr5_38469668_38561646	38517856	C C	CAAAAAAA others(25): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG01071.hp2 HG01069.hp1 HG01071.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0019	a0001c0001t0019g0013 a0001c0001t0019g0014 a0001c0001t0019g0013 a0001c0001t0019g0014	2	374	0.0054	32	c.561 others(49): Show c.561+5562_561+5563insTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTT	LIFR	ENSG00000113594.10	transcript	ENST00000453190.7	protein_coding	5/19			chr5	TogoVar
LIMA1_chr12_50170788_50288520	50175363	C C	CAAAAAAA others(25): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0138 a0001c0001t0004g0138	1	294	0.0034	32	c.17 others(43): Show c.1700_*1701insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	LIMA1	ENSG00000050405.14	transcript	ENST00000341247.9	protein_coding		424		chr12	TogoVar
LIMA1_chr12_50170788_50288520	50193578	T T	TACACATA others(25): Show TACACATATATGATATATATACACATATATATC	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG02630.hp2 HG02965.hp2 others(2): Show HG01167.hp2 HG02630.hp2 HG02965.hp2 HG03195.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0001 a0001c0001t0006	a0001c0001t0001g0222 a0001c0001t0006g0221 a0001c0001t0006g0234 others(2): Show a0001c0001t0001g0222 a0001c0001t0006g0221 a0001c0001t0006g0234 a0001c0001t0006g0291 a0001c0001t0006g0293	5	294	0.0170	32	c.103 others(51): Show c.1031-1018_1031-1017insGATATATATGTGTATATATATCATAT ATGTGT	LIMA1	ENSG00000050405.14	transcript	ENST00000341247.9	protein_coding	8/10			chr12	TogoVar
LIMD1_chr3_45589751_45691341	45686663	A A	ATATATAT others(25): Show ATATATATATATATATATATATATATTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01255.hp2 HG01255.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0030 a0001c0002t0030	a0001c0002t0030g0326 a0001c0002t0030g0326	1	358	0.0028	32	c.96 others(43): Show c.9604_*9605insTATATATATATATATATATATATATTTTTTTT	LIMD1	ENSG00000144791.10	transcript	ENST00000273317.5	protein_coding		323		chr3	TogoVar
LIMD1_chr3_45589751_45691341	45686663	A A	ATATATAT others(25): Show ATATATATATATATATATATATTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00735.hp1 HG03017.hp2 HG03209.hp2 HG00735.hp1 HG03017.hp2 HG03209.hp2	a0001 a0005 a0001 a0005	a0001c0002 a0001c0003 a0005c0012 a0001c0002 a0001c0003 a0005c0012	a0001c0002t0117 a0001c0003t0142 a0005c0012t0040 a0001c0002t0117 a0001c0003t0142 a0005c0012t0040	a0001c0002t0117g0337 a0001c0003t0142g0157 a0005c0012t0040g0271 a0001c0002t0117g0337 a0001c0003t0142g0157 a0005c0012t0040g0271	3	358	0.0084	32	c.96 others(43): Show c.9604_*9605insTATATATATATATATATATATTTTTTTTTTTT	LIMD1	ENSG00000144791.10	transcript	ENST00000273317.5	protein_coding		323		chr3	TogoVar
LIMD1_chr3_45589751_45691341	45686663	A A	ATATATAT others(25): Show ATATATATATATATATATTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00733.hp1 HG02056.hp1 HG02155.hp1 others(1): Show HG00733.hp1 HG02056.hp1 HG02155.hp1 NA18941.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0010 a0001c0001t0149 a0001c0002t0071 a0001c0001t0010 a0001c0001t0149 a0001c0002t0071	a0001c0001t0010g0050 a0001c0001t0010g0053 a0001c0001t0149g0048 others(1): Show a0001c0001t0010g0050 a0001c0001t0010g0053 a0001c0001t0149g0048 a0001c0002t0071g0313	4	358	0.0112	32	c.96 others(43): Show c.9604_*9605insTATATATATATATATATTTTTTTTTTTTTTTT	LIMD1	ENSG00000144791.10	transcript	ENST00000273317.5	protein_coding		323		chr3	TogoVar
LIME1_chr20_63731664_63744103	63732368	G G	GTGTGTGT others(25): Show GTGTGTGTGCGCGCATGTGTGTGGGTGAGGGCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00140.hp2 HG00423.hp1 others(189): Show HG00099.hp1 HG00140.hp2 HG00423.hp1 HG00438.hp2 HG00544.hp2 HG00621.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00735.hp2 HG00738.hp2 HG00741.hp2 HG01069.hp1 HG01074.hp2 HG01081.hp1 HG01106.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp2 HG01168.hp2 HG01169.hp1 HG01175.hp1 HG01175.hp2 HG01192.hp2 HG01243.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01346.hp1 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01496.hp2 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01928.hp1 HG01934.hp1 HG01934.hp2 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG02004.hp1 HG02027.hp1 HG02056.hp2 HG02074.hp1 HG02109.hp1 HG02129.hp2 HG02132.hp2 HG02148.hp1 HG02165.hp1 HG02257.hp1 HG02258.hp1 HG02258.hp2 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp2 HG02451.hp2 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02735.hp2 HG02738.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp2 HG02965.hp1 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp1 HG03209.hp1 HG03225.hp2 HG03239.hp2 HG03453.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03491.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03710.hp1 HG03831.hp1 HG03834.hp1 HG03942.hp2 HG04115.hp1 HG04184.hp2 HG04204.hp2 HG04228.hp1 HG06807.hp1 NA18522.hp1 NA18612.hp2 NA18906.hp2 NA18941.hp1 NA18942.hp1 NA18944.hp1 NA18946.hp1 NA18947.hp1 NA18949.hp1 NA18950.hp2 NA18952.hp2 NA18953.hp1 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18962.hp1 NA18965.hp2 NA18967.hp2 NA18973.hp2 NA18977.hp1 NA18979.hp1 NA18982.hp2 NA18983.hp2 NA18987.hp1 NA18988.hp2 NA18990.hp1 NA18991.hp1 NA18993.hp1 NA18997.hp2 NA18998.hp1 NA18999.hp2 NA19000.hp1 NA19002.hp1 NA19010.hp2 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19054.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19066.hp1 NA19066.hp2 NA19067.hp2 NA19070.hp1 NA19079.hp1 NA19080.hp2 NA19083.hp2 NA19086.hp1 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0006t0001	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0008 others(7): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0008 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0003g0001 a0001c0001t0004g0001 a0001c0001t0005g0003 a0001c0006t0001g0003	192	394	0.4873	32	c.-43 others(43): Show c.-4362_-4361insTGTGTGTGCGCGCATGTGTGTGGGTGAGGGCC	LIME1	ENSG00000203896.10	transcript	ENST00000309546.8	protein_coding		4295		chr20	TogoVar
LIME1_chr20_63731664_63744103	63732369	T T	TGTGTGTG others(25): Show TGTGTGTGCGCGCATGTGTGTGGGTGAGGGCCA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01069.hp2 HG01071.hp2 HG01168.hp1 others(3): Show HG01069.hp2 HG01071.hp2 HG01168.hp1 HG01169.hp2 HG03491.hp2 HG03492.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	6	394	0.0152	32	c.-43 others(43): Show c.-4361_-4360insGTGTGTGCGCGCATGTGTGTGGGTGAGGGCCA	LIME1	ENSG00000203896.10	transcript	ENST00000309546.8	protein_coding		4294		chr20	TogoVar
LIME1_chr20_63731664_63744103	63732378	G G	GCGCATGT others(25): Show GCGCATGTGTGTGGGTGAGGGCCTGTGTGTGCA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00609.hp1 HG00609.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	394	0.0025	32	c.-43 others(43): Show c.-4352_-4351insCGCATGTGTGTGGGTGAGGGCCTGTGTGTGCA	LIME1	ENSG00000203896.10	transcript	ENST00000309546.8	protein_coding		4285		chr20	TogoVar

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