Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LRIT1_chr10_84226520_84246546	84240830	A A	AGGCAAGT others(25): Show AGGCAAGTGGTCCCATCATGGGTGGGGTTGTAG	intron_variant intron_variant	MODIFIER	HG03654.hp1 HG03654.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0040 a0001c0001t0002g0040	1	418	0.0024	32	c.122 others(47): Show c.122+456_122+487dupCTACAACCCCACCCATGATGGGACCACTTG CC	LRIT1	ENSG00000148602.6	transcript	ENST00000372105.4	protein_coding	1/3			chr10	TogoVar
LRIT3_chr4_109843107_109877315	109850422	C C	CCTTTCTT others(25): Show CCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0005 a0001c0004t0005	a0001c0004t0005g0096 a0001c0004t0005g0096	1	17	0.0588	32	c.117 others(49): Show c.117-1049_117-1018dupCTTTCTTTCTTTCTTTCTTTCTTTCTTT CTTT	LRIT3	ENSG00000183423.12	transcript	ENST00000594814.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr4	TogoVar
LRMDA_chr10_75426624_76565168	76365107	T T	TATATATA others(25): Show TATATATATATATATATATATATATATACACAC	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0002 a0002	a0002c0006 a0002c0006	a0002c0006t0009 a0002c0006t0009	a0002c0006t0009g0001 a0002c0006t0009g0001	1	7	0.1429	32	c.601 others(51): Show c.601+40623_601+40624insTATATATATATATATATATATATATA CACACA	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRP11_chr6_149813757_149869359	149859376	T T	TTATATAT others(25): Show TTATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG00741.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0253 a0001c0001t0001g0253	1	332	0.0030	32	c.613 others(49): Show c.613+4031_613+4032insTATATATATATATATATATATATATATA TATA	LRP11	ENSG00000120256.11	transcript	ENST00000239367.7	protein_coding	1/6			chr6	TogoVar
LRP11_chr6_149813757_149869359	149859377	C C	CATATATA others(25): Show CATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0022	a0001c0001t0022g0197 a0001c0001t0022g0197	1	284	0.0035	32	c.613 others(49): Show c.613+4030_613+4031insATATATATATATATATATATATATATAT ATAT	LRP11	ENSG00000120256.11	transcript	ENST00000239367.7	protein_coding	1/6			chr6	TogoVar
LRP11_chr6_149813757_149869359	149859396	A A	ATATATAT others(25): Show ATATATATATATATATATATATATATATATTTT	intron_variant intron_variant	MODIFIER	HG00423.hp2 NA18968.hp1 HG00423.hp2 NA18968.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0237 a0001c0001t0001g0238 a0001c0001t0001g0237 a0001c0001t0001g0238	2	163	0.0123	32	c.613 others(49): Show c.613+4011_613+4012insAAAATATATATATATATATATATATATA TATA	LRP11	ENSG00000120256.11	transcript	ENST00000239367.7	protein_coding	1/6			chr6	TogoVar
LRP11_chr6_149813757_149869359	149859396	A A	ATATATAT others(25): Show ATATATATATATATATATATATATATATTTTTT	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG02523.hp1 HG00140.hp1 HG02523.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0161 a0001c0001t0001g0227 a0001c0001t0001g0161 a0001c0001t0001g0227	2	163	0.0123	32	c.613 others(49): Show c.613+4011_613+4012insAAAAAATATATATATATATATATATATA TATA	LRP11	ENSG00000120256.11	transcript	ENST00000239367.7	protein_coding	1/6			chr6	TogoVar
LRP1B_chr2_140226423_142136016	140389713	A A	ATATATAT others(25): Show ATATATATAGTTATATATATGTATATATAGTTT	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0014 a0001c0014	a0001c0014t0004 a0001c0014t0004	a0001c0014t0004g0001 a0001c0014t0004g0001	1	28	0.0357	32	c.104 others(53): Show c.10415-3736_10415-3705dupAAACTATATATACATATATATAAC TATATATA	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	66/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	140532947	T T	TATATATA others(25): Show TATATATATATATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG03225.hp1 HG02559.hp1 HG03225.hp1	a0001 a0001	a0001c0023 a0001c0025 a0001c0023 a0001c0025	a0001c0023t0003 a0001c0025t0005 a0001c0023t0003 a0001c0025t0005	a0001c0023t0003g0004 a0001c0025t0005g0018 a0001c0023t0003g0004 a0001c0025t0005g0018	2	12	0.1667	32	c.776 others(51): Show c.7762+1073_7762+1074insGTGTATATATATATATATATATATAT ATATAT	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	47/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	141103522	T T	TTCTCTCT others(25): Show TTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG02723.hp2 NA18522.hp2 NA19240.hp1 HG02723.hp2 NA18522.hp2 NA19240.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0001c0028 a0002c0006 a0001c0002 a0001c0028 a0002c0006	a0001c0002t0010 a0001c0028t0002 a0002c0006t0002 a0001c0002t0010 a0001c0028t0002 a0002c0006t0002	a0001c0002t0010g0022 a0001c0028t0002g0020 a0002c0006t0002g0025 a0001c0002t0010g0022 a0001c0028t0002g0020 a0002c0006t0002g0025	3	24	0.1250	32	c.101 others(53): Show c.1014-41250_1014-41249insGAGAGAGAGAGAGAGAGAGAGAGA GAGAGAGA	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	7/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	141517259	T T	TACACACA others(25): Show TACACACACACACACACACACACACATACACAC	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG01884.hp2 HG02559.hp1 others(2): Show HG01261.hp1 HG01884.hp2 HG02559.hp1 HG02723.hp2 NA18522.hp2	a0001 a0001	a0001c0002 a0001c0007 a0001c0016 others(2): Show a0001c0002 a0001c0007 a0001c0016 a0001c0023 a0001c0028	a0001c0002t0010 a0001c0007t0003 a0001c0016t0001 others(2): Show a0001c0002t0010 a0001c0007t0003 a0001c0016t0001 a0001c0023t0003 a0001c0028t0002	a0001c0002t0010g0022 a0001c0007t0003g0002 a0001c0016t0001g0011 others(2): Show a0001c0002t0010g0022 a0001c0007t0003g0002 a0001c0016t0001g0011 a0001c0023t0003g0004 a0001c0028t0002g0020	5	14	0.3571	32	c.206 others(51): Show c.206-36727_206-36726insGTGTGTATGTGTGTGTGTGTGTGTGT GTGTGT	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	2/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	141544298	C C	CTTCTTCT others(25): Show CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG01261.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0003 a0001c0007t0003	a0001c0007t0003g0002 a0001c0007t0003g0002	1	28	0.0357	32	c.206 others(51): Show c.206-63797_206-63766dupAAGAAGAAGAAGAAGAAGAAGAAGAA GAAGAA	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	2/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	141691465	A A	AACACACA others(25): Show AACACACACACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02486.hp2 HG02965.hp1 others(2): Show HG01884.hp2 HG02486.hp2 HG02965.hp1 HG02965.hp2 HG03516.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0001c0016 a0001c0024 others(2): Show a0001c0001 a0001c0016 a0001c0024 a0001c0027 a0004c0021	a0001c0001t0006 a0001c0016t0001 a0001c0024t0005 others(2): Show a0001c0001t0006 a0001c0016t0001 a0001c0024t0005 a0001c0027t0001 a0004c0021t0001	a0001c0001t0006g0023 a0001c0016t0001g0011 a0001c0024t0005g0009 others(2): Show a0001c0001t0006g0023 a0001c0016t0001g0011 a0001c0024t0005g0009 a0001c0027t0001g0021 a0004c0021t0001g0026	5	16	0.3125	32	c.205 others(53): Show c.205+118813_205+118814insGTGTGTGTGTGTGTGTGTGTGTGT GTGTGTGT	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	2/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	142115614	A A	ATATTATA others(25): Show ATATTATATATATATTATATATGTAATATATAT	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0023 a0001c0001t0006g0023	1	28	0.0357	32	c.82+ others(49): Show c.82+15033_82+15034insATATATATTACATATATAATATATATAT AATA	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	1/90			chr2	TogoVar
LRP2BP_chr4_185358872_185400924	185375494	A A	ATATATAT others(25): Show ATATATATATATATATATGTATATATATATGTG	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0056 a0001c0003t0056	a0001c0003t0056g0066 a0001c0003t0056g0066	1	342	0.0029	32	c.330 others(47): Show c.330+118_330+119insCACATATATATATACATATATATATATATA TA	LRP2BP	ENSG00000109771.16	transcript	ENST00000505916.6	protein_coding	4/8			chr4	TogoVar
LRP2_chr2_169122109_169367534	169168018	A A	AATATATA others(25): Show AATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18949.hp2 NA18949.hp2	a0009 a0009	a0009c0012 a0009c0012	a0009c0012t0008 a0009c0012t0008	a0009c0012t0008g0212 a0009c0012t0008g0212	1	20	0.0500	32	c.116 others(51): Show c.11635+520_11635+521insATATATATATATATATATATATATAT ATATAT	LRP2	ENSG00000081479.15	transcript	ENST00000649046.1	protein_coding	61/78			chr2	TogoVar
LRP2_chr2_169122109_169367534	169326172	C C	CTCCCTCT others(25): Show CTCCCTCTCCCTCTCCCTCCCCCTCTCCCCTCT	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG06807.hp2 NA20129.hp2 HG02109.hp2 HG06807.hp2 NA20129.hp2	a0017 a0022 a0055 a0017 a0022 a0055	a0017c0155 a0022c0158 a0055c0114 a0017c0155 a0022c0158 a0055c0114	a0017c0155t0001 a0022c0158t0002 a0055c0114t0006 a0017c0155t0001 a0022c0158t0002 a0055c0114t0006	a0017c0155t0001g0062 a0022c0158t0002g0020 a0055c0114t0006g0071 a0017c0155t0001g0062 a0022c0158t0002g0020 a0055c0114t0006g0071	3	159	0.0189	32	c.80- others(47): Show c.80-5289_80-5288insAGAGGGGAGAGGGGGAGGGAGAGGGAGAGG GA	LRP2	ENSG00000081479.15	transcript	ENST00000649046.1	protein_coding	1/78			chr2	TogoVar
LRP8_chr1_53237364_53333070	53284220	C C	CGCTTACT others(25): Show CGCTTACTTACCTACTACATACCCGGGCCGCTT	intron_variant intron_variant	MODIFIER	NA18939.hp1 NA18939.hp1	a0002 a0002	a0002c0009 a0002c0009	a0002c0009t0018 a0002c0009t0018	a0002c0009t0018g0142 a0002c0009t0018g0142	1	283	0.0035	32	c.368 others(49): Show c.368-3506_368-3505insAAGCGGCCCGGGTATGTAGTAGGTAAGT AAGC	LRP8	ENSG00000157193.18	transcript	ENST00000306052.12	protein_coding	3/18			chr1	TogoVar
LRP8_chr1_53237364_53333070	53330505	A A	AAAGGAAG others(25): Show AAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04228.hp2 HG04228.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0272 a0001c0001t0011g0272	1	223	0.0045	32	c.-25 others(43): Show c.-2594_-2593insCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT	LRP8	ENSG00000157193.18	transcript	ENST00000306052.12	protein_coding		2436		chr1	TogoVar
LRRC18_chr10_48904480_48944840	48923496	G G	GTATATAT others(25): Show GTATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02976.hp2 NA18906.hp2 NA19030.hp2 HG02976.hp2 NA18906.hp2 NA19030.hp2	a0002 a0003 a0002 a0003	a0002c0002 a0003c0003 a0002c0002 a0003c0003	a0002c0002t0001 a0003c0003t0002 a0002c0002t0001 a0003c0003t0002	a0002c0002t0001g0051 a0002c0002t0001g0346 a0003c0003t0002g0311 a0002c0002t0001g0051 a0002c0002t0001g0346 a0003c0003t0002g0311	3	365	0.0082	32	c.-77 others(49): Show c.-77-9265_-77-9264insTATATATATATATATATATATATATATA TATA	LRRC18	ENSG00000165383.12	transcript	ENST00000374160.8	protein_coding	2/3			chr10	TogoVar
LRRC18_chr10_48904480_48944840	48923506	A A	ATATATAT others(25): Show ATATATATATATATATATATATATATATGTATG	intron_variant intron_variant	MODIFIER	HG03669.hp2 HG03669.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0303 a0002c0002t0001g0303	1	134	0.0075	32	c.-77 others(49): Show c.-77-9275_-77-9274insCATACATATATATATATATATATATATA TATA	LRRC18	ENSG00000165383.12	transcript	ENST00000374160.8	protein_coding	2/3			chr10	TogoVar
LRRC18_chr10_48904480_48944840	48923506	A A	ATATATAT others(25): Show ATATATATATATATATATATATATGTATGTATG	intron_variant intron_variant	MODIFIER	HG01515.hp1 HG02615.hp1 HG03492.hp2 HG01515.hp1 HG02615.hp1 HG03492.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0201 a0001c0001t0001g0250 a0002c0002t0001g0121 a0001c0001t0001g0201 a0001c0001t0001g0250 a0002c0002t0001g0121	3	136	0.0221	32	c.-77 others(49): Show c.-77-9275_-77-9274insCATACATACATATATATATATATATATA TATA	LRRC18	ENSG00000165383.12	transcript	ENST00000374160.8	protein_coding	2/3			chr10	TogoVar
LRRC23_chr12_6899822_6919229	6909396	T T	TATATAAT others(25): Show TATATAATAGTATAATTATATATAATATATAAA	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01175.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0123 a0002c0002t0002g0123	1	228	0.0044	32	c.622 others(47): Show c.622-494_622-493insATATAATAGTATAATTATATATAATATATA AA	LRRC23	ENSG00000010626.15	transcript	ENST00000443597.7	protein_coding	5/7			chr12	TogoVar
LRRC27_chr10_132327193_132386508	132358789	G G	GAGCAGCG others(25): Show GAGCAGCGTGGGGAGGAGCCGAGGTGATGGAGC	intron_variant intron_variant	MODIFIER	HG03492.hp1 HG03492.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0197 a0001c0001t0001g0197	1	218	0.0046	32	c.117 others(51): Show c.1171-2666_1171-2665insCAGCGTGGGGAGGAGCCGAGGTGATG GAGCAG	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132364445	A A	ACACCCGC others(25): Show ACACCCGCGCTTACACCCACCCACACTTACACC	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0005 a0005	a0005c0017 a0005c0017	a0005c0017t0049 a0005c0017t0049	a0005c0017t0049g0269 a0005c0017t0049g0269	1	252	0.0040	32	c.129 others(49): Show c.1290-974_1290-973insGCGCTTACACCCACCCACACTTACACCC ACCC	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	9/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132364456	C C	CACACCCA others(25): Show CACACCCACCCACACTTACACCCACCCACACTT	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01074.hp1 HG01074.hp2 others(8): Show HG00735.hp1 HG01074.hp1 HG01074.hp2 HG01123.hp2 HG01928.hp2 HG01993.hp2 HG02056.hp1 HG02056.hp2 HG02293.hp2 NA18951.hp2 NA18963.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0028 a0001c0001t0039 a0001c0001t0001 a0001c0001t0028 a0001c0001t0039	a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0001g0067 others(7): Show a0001c0001t0001g0002 a0001c0001t0001g0057 a0001c0001t0001g0067 a0001c0001t0001g0122 a0001c0001t0001g0148 a0001c0001t0001g0152 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0028g0052 a0001c0001t0039g0075	11	215	0.0512	32	c.129 others(49): Show c.1290-957_1290-926dupACACTTACACCCACCCACACTTACACCC ACCC	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	9/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132364644	C C	CCACGCTT others(25): Show CCACGCTTACATCTACCTCCACACTCGCACTTA	intron_variant intron_variant	MODIFIER	HG01515.hp1 HG01515.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0256 a0001c0002t0004g0256	1	279	0.0036	32	c.129 others(49): Show c.1290-777_1290-776insGCTTACATCTACCTCCACACTCGCACTT ACAC	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	9/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132364644	C C	CCACGCTT others(25): Show CCACGCTTACATCTACCTGCACACCCACACTTA	intron_variant intron_variant	MODIFIER	HG01993.hp1 HG02145.hp2 HG02293.hp1 others(1): Show HG01993.hp1 HG02145.hp2 HG02293.hp1 HG02615.hp2	a0001 a0003 a0006 a0001 a0003 a0006	a0001c0003 a0003c0008 a0006c0012 a0001c0003 a0003c0008 a0006c0012	a0001c0003t0006 a0001c0003t0007 a0003c0008t0007 others(1): Show a0001c0003t0006 a0001c0003t0007 a0003c0008t0007 a0006c0012t0006	a0001c0003t0006g0088 a0001c0003t0007g0087 a0003c0008t0007g0094 others(1): Show a0001c0003t0006g0088 a0001c0003t0007g0087 a0003c0008t0007g0094 a0006c0012t0006g0109	4	282	0.0142	32	c.129 others(49): Show c.1290-777_1290-776insGCTTACATCTACCTGCACACCCACACTT ACAC	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	9/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC28_chr15_99246481_99395729	99282177	G G	GTTTTTTT others(25): Show GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0003 a0003	a0003c0005 a0003c0005	a0003c0005t0105 a0003c0005t0105	a0003c0005t0105g0279 a0003c0005t0105g0279	1	50	0.0200	32	c.210 others(49): Show c.210-5066_210-5065insTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTT	LRRC28	ENSG00000168904.15	transcript	ENST00000301981.8	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
LRRC2_chr3_46510385_46571302	46533803	C C	CTTTCTTT others(25): Show CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTG	intron_variant intron_variant	MODIFIER	HG01123.hp2 HG01123.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0311 a0002c0002t0002g0311	1	307	0.0033	32	c.491 others(47): Show c.491-895_491-894insCAAAGAAAGAAAGAAAGAAAGAAAGAAAGA AA	LRRC2	ENSG00000163827.14	transcript	ENST00000395905.8	protein_coding	4/8			chr3	TogoVar
LRRC31_chr3_169834172_169874935	169857415	C C	CATATATA others(25): Show CATATATACATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG01123.hp2 HG01358.hp2 others(16): Show HG00438.hp2 HG01123.hp2 HG01358.hp2 HG01975.hp1 HG02027.hp2 HG02135.hp1 HG03831.hp2 HG04115.hp1 NA18747.hp2 NA18966.hp2 NA18971.hp1 NA18982.hp1 NA18982.hp2 NA18993.hp1 NA19002.hp2 NA19072.hp1 NA19091.hp2 NA20300.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0012 a0001c0001 a0001c0002 a0001c0012	a0001c0001t0001 a0001c0002t0001 a0001c0012t0001 a0001c0001t0001 a0001c0002t0001 a0001c0012t0001	a0001c0001t0001g0013 a0001c0001t0001g0045 a0001c0001t0001g0080 others(14): Show a0001c0001t0001g0013 a0001c0001t0001g0045 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0089 a0001c0001t0001g0096 a0001c0001t0001g0111 a0001c0001t0001g0116 a0001c0001t0001g0173 a0001c0001t0001g0188 a0001c0001t0001g0205 a0001c0001t0001g0208 a0001c0001t0001g0238 a0001c0002t0001g0088 a0001c0002t0001g0203 a0001c0002t0001g0204 a0001c0012t0001g0209	19	165	0.1152	32	c.488 others(47): Show c.488-544_488-543insATATATATATATATATATATATATGTATAT AT	LRRC31	ENSG00000114248.10	transcript	ENST00000316428.10	protein_coding	3/8			chr3	TogoVar
LRRC31_chr3_169834172_169874935	169857415	C C	CATATATA others(25): Show CATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0136 a0001c0001t0001g0136	1	147	0.0068	32	c.488 others(47): Show c.488-544_488-543insATATATATATATATATATATATATATATAT AT	LRRC31	ENSG00000114248.10	transcript	ENST00000316428.10	protein_coding	3/8			chr3	TogoVar
LRRC36_chr16_67321815_67390204	67340935	C C	CTCTATAG others(25): Show CTCTATAGAATATAGAATATGTACTACATATAT	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG03139.hp2 HG02257.hp1 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0175 a0001c0001t0003g0176 a0001c0001t0003g0175 a0001c0001t0003g0176	2	145	0.0138	32	c.71- others(45): Show c.71-999_71-968dupCTACATATATTCTATAGAATATAGAATATGTA	LRRC36	ENSG00000159708.18	transcript	ENST00000329956.11	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
LRRC3B_chr3_26617772_26715776	26636812	C C	CCCTCCCT others(25): Show CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTG	intron_variant intron_variant	MODIFIER	HG03942.hp2 NA18952.hp1 NA19057.hp2 others(1): Show HG03942.hp2 NA18952.hp1 NA19057.hp2 NA19083.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0265 a0001c0001t0001g0297 a0001c0001t0001g0310 others(1): Show a0001c0001t0001g0265 a0001c0001t0001g0297 a0001c0001t0001g0310 a0001c0001t0001g0342	4	368	0.0109	32	c.-16 others(53): Show c.-161+13602_-161+13603insCCCTGCCTCCCTCCCTCCCTCCCT CCCTCCCT	LRRC3B	ENSG00000179796.13	transcript	ENST00000396641.7	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRRC3B_chr3_26617772_26715776	26671371	T T	TAGAGAGA others(25): Show TAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG01257.hp1 HG01258.hp1 HG01257.hp1 HG01258.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0150 a0001c0003t0001g0207 a0001c0003t0001g0150 a0001c0003t0001g0207	2	240	0.0083	32	c.-16 others(53): Show c.-160-38141_-160-38140insGAGAGAGAGAGAGAGAGAGAGAGA GAGAGAGA	LRRC3B	ENSG00000179796.13	transcript	ENST00000396641.7	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRRC3B_chr3_26617772_26715776	26671373	T T	TAGAGAGA others(25): Show TAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG01255.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0170 a0001c0001t0001g0170	1	46	0.0217	32	c.-16 others(53): Show c.-160-38130_-160-38099dupGAGAGAGAGAGAGAGAGAGAGAGA GAGAGAGA	LRRC3B	ENSG00000179796.13	transcript	ENST00000396641.7	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRRC3B_chr3_26617772_26715776	26671373	T T	TATAGAGA others(25): Show TATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02165.hp2 NA18941.hp1 NA18992.hp1 HG02165.hp2 NA18941.hp1 NA18992.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0061 a0001c0001t0001g0077 a0001c0001t0002g0323 a0001c0001t0001g0061 a0001c0001t0001g0077 a0001c0001t0002g0323	3	48	0.0625	32	c.-16 others(53): Show c.-160-38139_-160-38138insTAGAGAGAGAGAGAGAGAGAGAGA GAGAGAGA	LRRC3B	ENSG00000179796.13	transcript	ENST00000396641.7	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRRC3B_chr3_26617772_26715776	26671373	T T	TATATAGA others(25): Show TATATAGAGAGAGAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG03688.hp2 HG03688.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0273 a0001c0002t0002g0273	1	46	0.0217	32	c.-16 others(53): Show c.-160-38139_-160-38138insTATAGAGAGAGAGAGAGAGAGAGA GAGAGAGA	LRRC3B	ENSG00000179796.13	transcript	ENST00000396641.7	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRRC3B_chr3_26617772_26715776	26671373	T T	TATATATA others(25): Show TATATATAGAGAGAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG06807.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0028 a0001c0001t0001g0028	1	46	0.0217	32	c.-16 others(53): Show c.-160-38139_-160-38138insTATATAGAGAGAGAGAGAGAGAGA GAGAGAGA	LRRC3B	ENSG00000179796.13	transcript	ENST00000396641.7	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRRC3B_chr3_26617772_26715776	26671373	T T	TATATATA others(25): Show TATATATATATATAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	NA19011.hp1 NA19011.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0331 a0001c0001t0001g0331	1	46	0.0217	32	c.-16 others(53): Show c.-160-38139_-160-38138insTATATATATATAGAGAGAGAGAGA GAGAGAGA	LRRC3B	ENSG00000179796.13	transcript	ENST00000396641.7	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRRC3B_chr3_26617772_26715776	26671373	T T	TATATATA others(25): Show TATATATATATATATATATATAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	NA18952.hp1 NA18952.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0297 a0001c0001t0001g0297	1	46	0.0217	32	c.-16 others(53): Show c.-160-38139_-160-38138insTATATATATATATATATATAGAGA GAGAGAGA	LRRC3B	ENSG00000179796.13	transcript	ENST00000396641.7	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRRC3B_chr3_26617772_26715776	26671373	T T	TATATATA others(25): Show TATATATATATATATATATATATATAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0137 a0001c0001t0001g0137	1	46	0.0217	32	c.-16 others(53): Show c.-160-38139_-160-38138insTATATATATATATATATATATATA GAGAGAGA	LRRC3B	ENSG00000179796.13	transcript	ENST00000396641.7	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRRC3C_chr17_39922732_39949999	39949844	A A	AGAATATA others(25): Show AGAATATATATATATATATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02451.hp2 HG06807.hp1 HG02451.hp2 HG06807.hp1	a0001 a0001	a0001c0006 a0001c0012 a0001c0006 a0001c0012	a0001c0006t0003 a0001c0012t0004 a0001c0006t0003 a0001c0012t0004	a0001c0006t0003g0177 a0001c0012t0004g0056 a0001c0006t0003g0177 a0001c0012t0004g0056	2	400	0.0050	32	c.51 others(43): Show c.5110_*5111insGAATATATATATATATATATATATATATATAT	LRRC3C	ENSG00000204913.7	transcript	ENST00000377924.6	protein_coding		4846		chr17	TogoVar
LRRC40_chr1_70139805_70210579	70190677	T T	TAAAAAAA others(25): Show TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01081.hp1 NA19091.hp1 HG00738.hp2 HG01081.hp1 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0125 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0125	3	93	0.0323	32	c.152 others(49): Show c.152-1405_152-1404insTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTT	LRRC40	ENSG00000066557.6	transcript	ENST00000370952.4	protein_coding	1/14			chr1	TogoVar
LRRC40_chr1_70139805_70210579	70207785	G G	GTGCGATC others(25): Show GTGCGATCACAGCTCACTGCAACCTCGAAATCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03490.hp1 HG03490.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0196 a0001c0001t0002g0196	1	318	0.0031	32	c.-22 others(43): Show c.-2277_-2246dupGGATTTCGAGGTTGCAGTGAGCTGTGATCGCA	LRRC40	ENSG00000066557.6	transcript	ENST00000370952.4	protein_coding		2207		chr1	TogoVar
LRRC4B_chr19_50511892_50573435	50552622	A A	ATTCATCC others(25): Show ATTCATCCATCCGCCCATCCGTCCATCCATCTG	intron_variant intron_variant	MODIFIER	NA18990.hp1 NA19079.hp2 NA18990.hp1 NA19079.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0329 a0001c0001t0002g0330 a0001c0001t0002g0329 a0001c0001t0002g0330	2	358	0.0056	32	c.-35 others(49): Show c.-35-3750_-35-3749insCAGATGGATGGACGGATGGGCGGATGGA TGAA	LRRC4B	ENSG00000131409.13	transcript	ENST00000652263.1	protein_coding	1/2			chr19	TogoVar
LRRC4B_chr19_50511892_50573435	50552646	G G	GTCCATCC others(25): Show GTCCATCCATCTGTCCATCCATCCATCCATCCA	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00140.hp2 others(72): Show HG00099.hp1 HG00140.hp1 HG00140.hp2 HG00280.hp2 HG00597.hp2 HG00609.hp1 HG00621.hp2 HG00733.hp2 HG00735.hp1 HG01069.hp1 HG01071.hp2 HG01081.hp2 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01168.hp1 HG01175.hp2 HG01243.hp2 HG01257.hp2 HG01358.hp1 HG01496.hp2 HG01517.hp2 HG01934.hp1 HG01952.hp1 HG01975.hp1 HG01981.hp1 HG02004.hp1 HG02109.hp1 HG02132.hp1 HG02165.hp1 HG02273.hp2 HG02293.hp2 HG02451.hp2 HG02622.hp2 HG02630.hp1 HG02683.hp2 HG02698.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp2 HG02818.hp2 HG02897.hp2 HG03041.hp1 HG03139.hp2 HG03209.hp2 HG03486.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03579.hp1 HG03669.hp1 HG03831.hp1 HG03927.hp1 HG04199.hp2 HG04204.hp2 NA18612.hp1 NA18747.hp2 NA18942.hp1 NA18964.hp2 NA18983.hp1 NA18986.hp1 NA18990.hp2 NA18992.hp2 NA18995.hp1 NA19005.hp1 NA19005.hp2 NA19011.hp2 NA19012.hp2 NA19030.hp2 NA19085.hp1 NA19087.hp1 NA19090.hp2 NA20752.hp2 NA20805.hp1 NA20905.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0008 others(2): Show a0001c0001 a0001c0003 a0001c0008 a0002c0002 a0002c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0003t0002 a0001c0008t0001 a0002c0002t0001 a0002c0004t0001	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0013 others(70): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0025 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0047 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0091 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0100 a0001c0001t0001g0107 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0158 a0001c0001t0001g0163 a0001c0001t0001g0169 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0220 a0001c0001t0001g0260 a0001c0001t0001g0270 a0001c0001t0001g0282 a0001c0001t0001g0287 a0001c0001t0001g0297 a0001c0001t0001g0304 a0001c0001t0001g0306 a0001c0001t0001g0322 a0001c0001t0001g0327 a0001c0001t0001g0328 a0001c0001t0001g0331 a0001c0001t0001g0335 a0001c0001t0001g0337 a0001c0001t0002g0015 a0001c0001t0002g0020 a0001c0001t0002g0119 a0001c0001t0002g0120 a0001c0001t0002g0128 a0001c0001t0002g0165 a0001c0001t0002g0191 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0234 a0001c0001t0002g0239 a0001c0001t0002g0280 a0001c0001t0003g0344 a0001c0001t0003g0345 a0001c0001t0004g0352 a0001c0001t0005g0008 a0001c0003t0002g0283 a0001c0008t0001g0236 a0002c0002t0001g0027 a0002c0002t0001g0061 a0002c0002t0001g0110 a0002c0002t0001g0141 a0002c0002t0001g0164 a0002c0002t0001g0176 a0002c0002t0001g0233 a0002c0002t0001g0243 a0002c0002t0001g0244 a0002c0002t0001g0249 a0002c0002t0001g0262 a0002c0002t0001g0279 a0002c0004t0001g0127 a0002c0004t0001g0323 a0002c0004t0001g0324	75	300	0.2500	32	c.-35 others(49): Show c.-35-3774_-35-3773insTGGATGGATGGATGGATGGACAGATGGA TGGA	LRRC4B	ENSG00000131409.13	transcript	ENST00000652263.1	protein_coding	1/2			chr19	TogoVar
LRRC4B_chr19_50511892_50573435	50552646	G G	GTCCATCC others(25): Show GTCCATCCATCTGTCCGTCCATCCATCCATCCA	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02615.hp1 HG02622.hp1 others(7): Show HG02451.hp1 HG02615.hp1 HG02622.hp1 HG02647.hp2 HG02717.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp2 NA19043.hp2 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0002 a0001c0001 a0001c0003 a0002c0002	a0001c0001t0001 a0001c0003t0001 a0002c0002t0001 a0001c0001t0001 a0001c0003t0001 a0002c0002t0001	a0001c0001t0001g0064 a0001c0001t0001g0070 a0001c0001t0001g0072 others(7): Show a0001c0001t0001g0064 a0001c0001t0001g0070 a0001c0001t0001g0072 a0001c0003t0001g0065 a0001c0003t0001g0069 a0001c0003t0001g0071 a0001c0003t0001g0075 a0001c0003t0001g0103 a0002c0002t0001g0073 a0002c0002t0001g0074	10	235	0.0426	32	c.-35 others(49): Show c.-35-3774_-35-3773insTGGATGGATGGATGGACGGACAGATGGA TGGA	LRRC4B	ENSG00000131409.13	transcript	ENST00000652263.1	protein_coding	1/2			chr19	TogoVar
LRRC4C_chr11_40109209_41464652	40584177	C C	CATATATA others(25): Show CATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02572.hp2 HG02280.hp2 HG02572.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0018 a0001c0002t0001g0030 a0001c0002t0001g0018 a0001c0002t0001g0030	2	13	0.1538	32	c.-27 others(53): Show c.-270+63964_-270+63965insATATATATATATATATATATATAT ATATATAT	LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	3/6			chr11	TogoVar
LRRC4C_chr11_40109209_41464652	40633371	T T	TTCTTTCT others(25): Show TTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTC	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01074.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0036 a0001c0001t0002g0036	1	5	0.2000	32	c.-27 others(53): Show c.-270+14770_-270+14771insGAGAGAGAAAGAAAGAAAGAAAGA AAGAAAGA	LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	3/6			chr11	TogoVar

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