Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
MEI4_chr6_77648039_77932045	77680128	A A	AAAAAAAA others(25): Show AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG02630.hp2 NA18943.hp2 others(3): Show HG01175.hp2 HG02630.hp2 NA18943.hp2 NA18955.hp2 NA19002.hp2 NA19060.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0012 a0001c0001t0001 a0001c0001t0012	a0001c0001t0001g0014 a0001c0001t0001g0017 a0001c0001t0001g0018 others(3): Show a0001c0001t0001g0014 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0021 a0001c0001t0001g0322 a0001c0001t0012g0126	6	360	0.0167	32	c.-14 others(51): Show c.-14-10529_-14-10528insAAAAAAAAAAAAAAAAAAAAAAAAAA AAAATA	MEI4	ENSG00000269964.4	transcript	ENST00000684080.1	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr6	TogoVar
MEIOB_chr16_1828986_1877164	1842623	C C	CAAAAAAA others(25): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02071.hp1 HG02280.hp1 others(4): Show HG01891.hp1 HG02071.hp1 HG02280.hp1 HG02723.hp2 NA18982.hp1 NA19066.hp2 NA19074.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0007 a0002c0002 a0001c0001 a0001c0007 a0002c0002	a0001c0001t0001 a0001c0007t0001 a0002c0002t0001 a0001c0001t0001 a0001c0007t0001 a0002c0002t0001	a0001c0001t0001g0086 a0001c0001t0001g0106 a0001c0001t0001g0107 others(4): Show a0001c0001t0001g0086 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0123 a0001c0007t0001g0012 a0002c0002t0001g0045 a0002c0002t0001g0057	7	380	0.0184	32	c.881 others(47): Show c.881-651_881-650insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TT	MEIOB	ENSG00000162039.18	transcript	ENST00000325962.9	protein_coding	10/13			chr16	TogoVar
MEIOC_chr17_44651468_44680801	44651862	T T	TATATATA others(25): Show TATATATATATATATATGTATGTATATATATAC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19057.hp1 NA19057.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	352	0.0028	32	c.-47 others(43): Show c.-4752_-4751insATATATATATATATATGTATGTATATATATAC	MEIOC	ENSG00000180336.18	transcript	ENST00000409122.7	protein_coding		4605		chr17	TogoVar
MEIOC_chr17_44651468_44680801	44651864	T T	TATATATA others(25): Show TATATATATATATATATGTATGTATATATATAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp1 HG01074.hp1 NA18964.hp1 others(5): Show HG00280.hp1 HG01074.hp1 NA18964.hp1 NA18991.hp2 NA19005.hp2 NA19010.hp1 NA19060.hp2 NA19064.hp2	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0001 a0001c0007t0001 a0001c0001t0001 a0001c0007t0001	a0001c0001t0001g0029 a0001c0001t0001g0146 a0001c0001t0001g0148 others(5): Show a0001c0001t0001g0029 a0001c0001t0001g0146 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0151 a0001c0001t0001g0179 a0001c0001t0001g0192 a0001c0007t0001g0017	8	352	0.0227	32	c.-47 others(43): Show c.-4750_-4749insATATATATATATATATGTATGTATATATATAC	MEIOC	ENSG00000180336.18	transcript	ENST00000409122.7	protein_coding		4603		chr17	TogoVar
MEIOC_chr17_44651468_44680801	44652113	G G	GTGTGTGT others(25): Show GTGTGTGTGTGTGTGTGTGTGTGTGTGTATACA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01361.hp2 HG02647.hp2 HG01361.hp2 HG02647.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0015 a0002c0002t0001g0027 a0002c0002t0001g0015 a0002c0002t0001g0027	2	352	0.0057	32	c.-45 others(43): Show c.-4501_-4500insTGTGTGTGTGTGTGTGTGTGTGTGTGTATACA	MEIOC	ENSG00000180336.18	transcript	ENST00000409122.7	protein_coding		4354		chr17	TogoVar
MEIOC_chr17_44651468_44680801	44652114	T T	TGTGTGTG others(25): Show TGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00609.hp1 HG00642.hp2 HG02056.hp2 others(17): Show HG00609.hp1 HG00642.hp2 HG02056.hp2 HG02165.hp2 HG02258.hp1 HG02523.hp1 HG02572.hp1 HG02818.hp1 HG03139.hp1 HG03540.hp1 HG03927.hp2 NA18747.hp2 NA18964.hp2 NA18973.hp1 NA18985.hp2 NA19001.hp1 NA19062.hp2 NA19087.hp2 NA20300.hp1 NA20905.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0103 a0001c0001t0001g0105 a0002c0002t0001g0005 others(11): Show a0001c0001t0001g0103 a0001c0001t0001g0105 a0002c0002t0001g0005 a0002c0002t0001g0013 a0002c0002t0001g0060 a0002c0002t0001g0078 a0002c0002t0001g0079 a0002c0002t0001g0083 a0002c0002t0001g0084 a0002c0002t0001g0094 a0002c0002t0001g0114 a0002c0002t0001g0116 a0002c0002t0001g0119 a0002c0002t0001g0121	20	352	0.0568	32	c.-45 others(43): Show c.-4500_-4499insGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAC	MEIOC	ENSG00000180336.18	transcript	ENST00000409122.7	protein_coding		4353		chr17	TogoVar
MEIOC_chr17_44651468_44680801	44670538	C C	CTTTTTTT others(25): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG02071.hp1 HG02071.hp2 HG01074.hp1 HG02071.hp1 HG02071.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0152 a0001c0001t0001g0179 a0001c0001t0001g0193 a0001c0001t0001g0152 a0001c0001t0001g0179 a0001c0001t0001g0193	3	352	0.0085	32	c.245 others(51): Show c.2457+1041_2457+1042insTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTT	MEIOC	ENSG00000180336.18	transcript	ENST00000409122.7	protein_coding	6/7		INFO_REALIGN_3_PRIME	chr17	TogoVar
MEIS1_chr2_66430125_66578869	66473397	A A	AAAAAAAA others(25): Show AAAAAAAAAAAATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0212 a0001c0001t0002g0212	1	246	0.0041	32	c.742 others(49): Show c.742+9178_742+9179insAAAAAAAAAATATATATATATATATATA TATA	MEIS1	ENSG00000143995.20	transcript	ENST00000272369.14	protein_coding	7/12		INFO_REALIGN_3_PRIME	chr2	TogoVar
MEIS3_chr19_47398124_47424527	47420524	A A	AGAGAGAG others(25): Show AGAGAGAGAGACAGAGACAGACGCGGGTGGGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01169.hp2 HG01169.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0083 a0001c0001t0002g0083	1	251	0.0040	32	c.-14 others(43): Show c.-1444_-1443insCTCCCACCCGCGTCTGTCTCTGTCTCTCTCTC	MEIS3	ENSG00000105419.18	transcript	ENST00000558555.6	protein_coding		998		chr19	TogoVar
MELK_chr9_36567895_36682682	36636782	T T	TTCTTTCT others(25): Show TTCTTTCTTTCTTTCTGTCTGTCTGTCTGTCTG	intron_variant intron_variant	MODIFIER	HG02074.hp1 HG02074.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0131 a0001c0002t0001g0131	1	242	0.0041	32	c.834 others(49): Show c.834+3585_834+3586insTTCTTTCTTTCTGTCTGTCTGTCTGTCT GTCT	MELK	ENSG00000165304.8	transcript	ENST00000298048.7	protein_coding	10/17		INFO_REALIGN_3_PRIME	chr9	TogoVar
MEMO1_chr2_31862823_32016008	31969359	T T	TTACGTGT others(25): Show TTACGTGTATATATATACACATGTGTATATATA	intron_variant intron_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0070 a0001c0001t0001g0070	1	304	0.0033	32	c.62- others(49): Show c.62-26008_62-25977dupTATATATACACATGTGTATATATATACA CGTA	MEMO1	ENSG00000162959.14	transcript	ENST00000404530.6	protein_coding	2/9			chr2	TogoVar
MEMO1_chr2_31862823_32016008	32002206	T T	TATATACG others(25): Show TATATACGTATATACGTATATGTGTATATATAC	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0003 a0001c0001t0002g0003	1	304	0.0033	32	c.61+ others(47): Show c.61+7949_61+7980dupGTATATATACACATATACGTATATACGTAT AT	MEMO1	ENSG00000162959.14	transcript	ENST00000404530.6	protein_coding	2/9			chr2	TogoVar
MERTK_chr2_111893607_112034561	111925275	G G	GATATATA others(25): Show GATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18993.hp2 NA19057.hp1 NA18993.hp2 NA19057.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0026 a0003c0003t0001g0045 a0003c0003t0001g0026 a0003c0003t0001g0045	2	288	0.0069	32	c.62- others(47): Show c.62-3827_62-3826insATATATATATATATATATATATATATATAT AT	MERTK	ENSG00000153208.19	transcript	ENST00000295408.9	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
MERTK_chr2_111893607_112034561	111925292	A A	ATATATAT others(25): Show ATATATATATATATATATATATATATATATTTT	intron_variant intron_variant	MODIFIER	HG04199.hp1 NA18906.hp1 HG04199.hp1 NA18906.hp1	a0003 a0005 a0003 a0005	a0003c0003 a0005c0005 a0003c0003 a0005c0005	a0003c0003t0001 a0005c0005t0003 a0003c0003t0001 a0005c0005t0003	a0003c0003t0001g0042 a0005c0005t0003g0010 a0003c0003t0001g0042 a0005c0005t0003g0010	2	288	0.0069	32	c.62- others(47): Show c.62-3827_62-3826insATATATATATATATATATATATATATATTT TT	MERTK	ENSG00000153208.19	transcript	ENST00000295408.9	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
MERTK_chr2_111893607_112034561	111925292	A A	ATATATAT others(25): Show ATATATATATATATATATATATATTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0155 a0002c0002t0001g0155	1	288	0.0035	32	c.62- others(47): Show c.62-3827_62-3826insATATATATATATATATATATATTTTTTTTT TT	MERTK	ENSG00000153208.19	transcript	ENST00000295408.9	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
MERTK_chr2_111893607_112034561	111925292	A A	ATATATAT others(25): Show ATATATATATATATATTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0005 a0005	a0005c0020 a0005c0020	a0005c0020t0001 a0005c0020t0001	a0005c0020t0001g0086 a0005c0020t0001g0086	1	288	0.0035	32	c.62- others(47): Show c.62-3827_62-3826insATATATATATATATTTTTTTTTTTTTTTTT TT	MERTK	ENSG00000153208.19	transcript	ENST00000295408.9	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
MERTK_chr2_111893607_112034561	111929580	A A	ATATTTAT others(25): Show ATATTTATTTATTTATTTATTTATTTATTTATT	intron_variant intron_variant	MODIFIER	HG03491.hp2 HG04115.hp2 HG03491.hp2 HG04115.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0017 a0003c0003t0001g0055 a0003c0003t0001g0017 a0003c0003t0001g0055	2	288	0.0069	32	c.482 others(45): Show c.482+58_482+59insTTTATTTATTTATTTATTTATTTATTTATTTA	MERTK	ENSG00000153208.19	transcript	ENST00000295408.9	protein_coding	2/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
MERTK_chr2_111893607_112034561	111951522	C C	CATATATA others(25): Show CATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18947.hp1 NA18963.hp2 NA18984.hp1 others(1): Show NA18947.hp1 NA18963.hp2 NA18984.hp1 NA19066.hp1	a0002 a0003 a0002 a0003	a0002c0002 a0003c0003 a0002c0002 a0003c0003	a0002c0002t0002 a0003c0003t0001 a0002c0002t0002 a0003c0003t0001	a0002c0002t0002g0265 a0003c0003t0001g0027 a0003c0003t0001g0036 others(1): Show a0002c0002t0002g0265 a0003c0003t0001g0027 a0003c0003t0001g0036 a0003c0003t0001g0044	4	288	0.0139	32	c.757 others(49): Show c.757+3982_757+3983insTATATATATATATATATATATATATATA TATA	MERTK	ENSG00000153208.19	transcript	ENST00000295408.9	protein_coding	4/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
METAP2_chr12_95469152_95520839	95476514	A A	AAAAGAAA others(25): Show AAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0340 a0001c0001t0018g0340	1	382	0.0026	32	c.259 others(47): Show c.259+363_259+364insGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA AA	METAP2	ENSG00000111142.14	transcript	ENST00000323666.10	protein_coding	2/10		INFO_REALIGN_3_PRIME	chr12	TogoVar
METRNL_chr17_83074609_83100122	83090116	T T	TGCCCCAG others(25): Show TGCCCCAGGGTGGGAGCCACACACCCCCGCCCC	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02647.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0032 a0001c0001t0002g0032	1	399	0.0025	32	c.557 others(49): Show c.557-3024_557-2993dupCGCCCCGCCCCAGGGTGGGAGCCACACA CCCC	METRNL	ENSG00000176845.13	transcript	ENST00000320095.12	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr17	TogoVar
METRNL_chr17_83074609_83100122	83090163	G G	GCCACACA others(25): Show GCCACACACCCCCGCCCCGCCCCAGGGTGGGAA	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01243.hp1 HG02109.hp2 others(1): Show HG00639.hp2 HG01243.hp1 HG02109.hp2 HG02559.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0006 a0001c0001t0002 a0001c0001t0006	a0001c0001t0002g0114 a0001c0001t0006g0061 a0001c0001t0006g0065 others(1): Show a0001c0001t0002g0114 a0001c0001t0006g0061 a0001c0001t0006g0065 a0001c0001t0006g0066	4	399	0.0100	32	c.557 others(49): Show c.557-2993_557-2992insCGCCCCGCCCCAGGGTGGGAACCACACA CCCC	METRNL	ENSG00000176845.13	transcript	ENST00000320095.12	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr17	TogoVar
METRNL_chr17_83074609_83100122	83090163	G G	GCCACACA others(25): Show GCCACACACCCCCTCCCCGCCCCAGGGTGGGAA	intron_variant intron_variant	MODIFIER	HG01981.hp1 HG01981.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0309 a0001c0001t0002g0309	1	399	0.0025	32	c.557 others(49): Show c.557-2993_557-2992insCTCCCCGCCCCAGGGTGGGAACCACACA CCCC	METRNL	ENSG00000176845.13	transcript	ENST00000320095.12	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr17	TogoVar
METRNL_chr17_83074609_83100122	83090298	A A	ACACACAC others(25): Show ACACACACCCCCGCCCCGCCCCAGGGTGGGAAC	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0022 a0001c0001t0002g0022	1	399	0.0025	32	c.557 others(49): Show c.557-2854_557-2853insCGCCCCAGGGTGGGAACCACACACCCCC GCCC	METRNL	ENSG00000176845.13	transcript	ENST00000320095.12	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr17	TogoVar
METRNL_chr17_83074609_83100122	83090329	G G	GCCACACA others(25): Show GCCACACACCCCCGCCCCGCCCCAGGGTGGGAA	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG02886.hp1 NA18961.hp2 HG00408.hp1 HG02886.hp1 NA18961.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0001 a0001c0001t0002 a0001c0001t0003	a0001c0001t0001g0325 a0001c0001t0002g0374 a0001c0001t0003g0379 a0001c0001t0001g0325 a0001c0001t0002g0374 a0001c0001t0003g0379	3	399	0.0075	32	c.557 others(49): Show c.557-2830_557-2829insCCCCGCCCCGCCCCAGGGTGGGAACCAC ACAC	METRNL	ENSG00000176845.13	transcript	ENST00000320095.12	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr17	TogoVar
METRNL_chr17_83074609_83100122	83090371	A A	ACACACAC others(25): Show ACACACACCCCCGCCCTGCCCCAGGGTGGGAGC	intron_variant intron_variant	MODIFIER	NA18967.hp2 NA19081.hp1 NA18967.hp2 NA19081.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0002 a0001c0001t0002 a0001c0002t0002	a0001c0001t0002g0329 a0001c0002t0002g0263 a0001c0001t0002g0329 a0001c0002t0002g0263	2	399	0.0050	32	c.557 others(49): Show c.557-2789_557-2788insCCCCGCCCTGCCCCAGGGTGGGAGCCAC ACAC	METRNL	ENSG00000176845.13	transcript	ENST00000320095.12	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr17	TogoVar
METRNL_chr17_83074609_83100122	83096801	C C	CACTGGCT others(25): Show CACTGGCTCAGGTGTGTACCGGCTCGGGTGTGT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0116 a0001c0001t0013g0116	1	399	0.0025	32	c.22 others(43): Show c.2226_*2227insACTGGCTCAGGTGTGTACCGGCTCGGGTGTGT	METRNL	ENSG00000176845.13	transcript	ENST00000320095.12	protein_coding		1680		chr17	TogoVar
METRNL_chr17_83074609_83100122	83098694	T T	TTGAGCTT others(25): Show TTGAGCTTCCTCTGCTGGGAGGGCTTTGTCAGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0173 a0001c0002t0001g0173	1	399	0.0025	32	c.41 others(43): Show c.4119_*4120insTGAGCTTCCTCTGCTGGGAGGGCTTTGTCAGA	METRNL	ENSG00000176845.13	transcript	ENST00000320095.12	protein_coding		3573		chr17	TogoVar
METTL15_chr11_28103388_28338507	28194122	A A	ATCTTTCT others(25): Show ATCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	intron_variant intron_variant	MODIFIER	HG02080.hp1 NA18747.hp1 NA18954.hp1 HG02080.hp1 NA18747.hp1 NA18954.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0043 a0001c0001t0003g0046 a0001c0001t0003g0048 a0001c0001t0003g0043 a0001c0001t0003g0046 a0001c0001t0003g0048	3	332	0.0090	32	c.271 others(51): Show c.271-16918_271-16887dupCTTTCTTTCTTTCTTTCTTTCTTTCT TTCTTT	METTL15	ENSG00000169519.21	transcript	ENST00000407364.8	protein_coding	3/6		INFO_REALIGN_3_PRIME	chr11	TogoVar
METTL21C_chr13_102680747_102700044	102685359	A A	AACAAACA others(25): Show AACAAACAAAAAAAAAAATATATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0006	a0001c0002t0006g0084 a0001c0002t0006g0084	1	488	0.0021	32	c.67 others(41): Show c.671_*672insATATATATATATATATTTTTTTTTTTGTTTGT	METTL21C	ENSG00000139780.8	transcript	ENST00000267273.7	protein_coding		387		chr13	TogoVar
METTL24_chr6_110238940_110363349	110302585	G G	GTATATAT others(25): Show GTATATATACACATATACACACACATATGTGTA	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG02040.hp1 NA19090.hp2 HG01099.hp2 HG02040.hp1 NA19090.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 a0001c0001t0001 a0001c0002t0001 a0001c0002t0002	a0001c0001t0001g0146 a0001c0002t0001g0084 a0001c0002t0002g0049 a0001c0001t0001g0146 a0001c0002t0001g0084 a0001c0002t0002g0049	3	268	0.0112	32	c.558 others(49): Show c.558-3467_558-3436dupTACACATATGTGTGTGTATATGTGTATA TATA	METTL24	ENSG00000053328.9	transcript	ENST00000338882.5	protein_coding	3/4			chr6	TogoVar
METTL8_chr2_171310746_171438990	171343462	T T	TAAATAAA others(25): Show TAAATAAATAAATAAATAAATAAATAAATAAAA	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG02040.hp1 NA18942.hp1 others(1): Show HG00408.hp1 HG02040.hp1 NA18942.hp1 NA19063.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0009 a0001c0002t0009	a0001c0002t0009g0290 a0001c0002t0009g0291 a0001c0002t0009g0292 others(1): Show a0001c0002t0009g0290 a0001c0002t0009g0291 a0001c0002t0009g0292 a0001c0002t0009g0293	4	332	0.0121	32	c.236 others(49): Show c.236-3909_236-3908insTTTTATTTATTTATTTATTTATTTATTT ATTT	METTL8	ENSG00000123600.21	transcript	ENST00000375258.9	protein_coding	3/9			chr2	TogoVar
METTL8_chr2_171310746_171438990	171363796	A A	ATATATAT others(25): Show ATATATATATATATATATATATATATATATATG	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0021 a0001c0003t0021	a0001c0003t0021g0239 a0001c0003t0021g0239	1	332	0.0030	32	c.144 others(49): Show c.144-3284_144-3283insCATATATATATATATATATATATATATA TATA	METTL8	ENSG00000123600.21	transcript	ENST00000375258.9	protein_coding	2/9			chr2	TogoVar
METTL8_chr2_171310746_171438990	171404052	C C	CATATATA others(25): Show CATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18946.hp1 NA18946.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0080 a0001c0001t0003g0080	1	332	0.0030	32	c.-12 others(51): Show c.-12-11887_-12-11856dupATATATATATATATATATATATATAT ATATAT	METTL8	ENSG00000123600.21	transcript	ENST00000375258.9	protein_coding	1/9			chr2	TogoVar
MET_chr7_116667196_116803377	116754983	G G	GGAAAGAA others(25): Show GGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	intron_variant intron_variant	MODIFIER	NA18945.hp1 NA18960.hp2 NA18945.hp1 NA18960.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0055 a0001c0002t0001g0175 a0001c0002t0001g0055 a0001c0002t0001g0175	2	340	0.0059	32	c.170 others(49): Show c.1702-343_1702-312dupGAAAGAAAGAAAGAAAGAAAGAAAGAAA GAAA	MET	ENSG00000105976.16	transcript	ENST00000397752.8	protein_coding	5/20		INFO_REALIGN_3_PRIME	chr7	TogoVar
MFGE8_chr15_88893683_88918379	88913993	T T	TAAAAAAA others(25): Show TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp2 HG01934.hp2 HG01993.hp2 others(1): Show HG00408.hp2 HG01934.hp2 HG01993.hp2 NA18956.hp1	a0001 a0012 a0001 a0012	a0001c0002 a0012c0016 a0001c0002 a0012c0016	a0001c0002t0002 a0012c0016t0002 a0001c0002t0002 a0012c0016t0002	a0001c0002t0002g0051 a0001c0002t0002g0160 a0001c0002t0002g0196 others(1): Show a0001c0002t0002g0051 a0001c0002t0002g0160 a0001c0002t0002g0196 a0012c0016t0002g0217	4	436	0.0092	32	c.-67 others(41): Show c.-675_-674insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	MFGE8	ENSG00000140545.16	transcript	ENST00000268150.13	protein_coding		615		chr15	TogoVar
MFGE8_chr15_88893683_88918379	88915900	A A	ATATATAT others(25): Show ATATATATACATATATATATGTATATATATGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18987.hp1 NA18987.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0233 a0002c0001t0001g0233	1	436	0.0023	32	c.-25 others(43): Show c.-2582_-2581insCACATATATATACATATATATATGTATATATA	MFGE8	ENSG00000140545.16	transcript	ENST00000268150.13	protein_coding		2522		chr15	TogoVar
MFN1_chr3_179342709_179399936	179397416	A A	AGGGGGGG others(25): Show AGGGGGGGGGGAGAGGGGGGGGGGGGGGGGGGG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0018 a0001c0001t0001g0018	1	402	0.0025	32	c.53 others(43): Show c.5357_*5358insGGGGGGGGGGAGAGGGGGGGGGGGGGGGGGGG	MFN1	ENSG00000171109.19	transcript	ENST00000471841.6	protein_coding		2481		chr3	TogoVar
MFSD14B_chr9_94369569_94466042	94373681	A A	ATTTTTTT others(25): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18944.hp1 NA18974.hp1 NA19009.hp1 others(2): Show NA18944.hp1 NA18974.hp1 NA19009.hp1 NA19057.hp1 NA19080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0002 a0001c0001t0003	a0001c0001t0002g0004 a0001c0001t0002g0145 a0001c0001t0002g0150 others(2): Show a0001c0001t0002g0004 a0001c0001t0002g0145 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0003g0147	5	350	0.0143	32	c.-11 others(43): Show c.-1139_-1138insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	MFSD14B	ENSG00000148110.17	transcript	ENST00000375344.8	protein_coding		887		chr9	TogoVar
MGAM2_chr7_142106718_142227324	142174715	C C	CTTTTTTT others(25): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18998.hp1 NA18998.hp2 NA18998.hp1 NA18998.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0154 a0002c0002t0001g0293 a0001c0001t0001g0154 a0002c0002t0001g0293	2	329	0.0061	32	c.368 others(49): Show c.3688-919_3688-918insTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTT	MGAM2	ENSG00000257743.9	transcript	ENST00000477922.4	protein_coding	31/47		INFO_REALIGN_3_PRIME	chr7	TogoVar
MGAM_chr7_141990879_142111747	142041862	T T	TATATATA others(25): Show TATATATATATTATATATATACGTATATATATA	intron_variant intron_variant	MODIFIER	HG03017.hp1 HG03017.hp1	a0005 a0005	a0005c0007 a0005c0007	a0005c0007t0001 a0005c0007t0001	a0005c0007t0001g0228 a0005c0007t0001g0228	1	316	0.0032	32	c.249 others(51): Show c.2498+1042_2498+1043insTATATAATATATATATTATATATATA CGTATA	MGAM	ENSG00000257335.8	transcript	ENST00000475668.6	protein_coding	21/70		INFO_REALIGN_3_PRIME	chr7	TogoVar
MGAM_chr7_141990879_142111747	142067986	A A	AAATATAT others(25): Show AAATATATATATATATATATATATATTTTTTTT	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG01069.hp1	a0001 a0001	a0001c0010 a0001c0010	a0001c0010t0001 a0001c0010t0001	a0001c0010t0001g0110 a0001c0010t0001g0110	1	316	0.0032	32	c.500 others(49): Show c.5004+561_5004+562insAATATATATATATATATATATATATTTT TTTT	MGAM	ENSG00000257335.8	transcript	ENST00000475668.6	protein_coding	42/70			chr7	TogoVar
MGAT1_chr5_180779780_180807806	180794411	T T	TTTTATAT others(25): Show TTTTATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0068 a0003c0004t0068	a0003c0004t0068g0257 a0003c0004t0068g0257	1	436	0.0023	32	c.-12 others(51): Show c.-126-1315_-126-1314insTATATATATATATATATATATATATA TATAAA	MGAT1	ENSG00000131446.17	transcript	ENST00000307826.5	protein_coding	1/1			chr5	TogoVar
MGAT3_chr22_39452012_39497194	39475128	C C	CTTTTTTT others(25): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0246 a0001c0001t0001g0246	1	306	0.0033	32	c.-1- others(49): Show c.-1-12197_-1-12196insTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTT	MGAT3	ENSG00000128268.12	transcript	ENST00000341184.7	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr22	TogoVar
MGAT5B_chr17_76863404_76955393	76925141	G G	GGGAGAAA others(25): Show GGGAGAAAGCTCCTCCTTCACGCCCTGCCCCCC	intron_variant intron_variant	MODIFIER	NA18954.hp2 NA18954.hp2	a0002 a0002	a0002c0006 a0002c0006	a0002c0006t0002 a0002c0006t0002	a0002c0006t0002g0005 a0002c0006t0002g0005	1	278	0.0036	32	c.115 others(47): Show c.1157+75_1157+76insCGGAGAAAGCTCCTCCTTCACGCCCTGCCC CC	MGAT5B	ENSG00000167889.13	transcript	ENST00000569840.7	protein_coding	9/17		INFO_REALIGN_3_PRIME	chr17	TogoVar
MGAT5_chr2_134249072_134459621	134381536	C C	CAGACAGA others(25): Show CAGACAGATAGATAGATAGATAGATAGATAGAT	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01074.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0036 a0001c0001t0036	a0001c0001t0036g0076 a0001c0001t0036g0076	1	282	0.0036	32	c.138 others(53): Show c.1380+19131_1380+19132insCAGATAGATAGATAGATAGATAGA TAGATAGA	MGAT5	ENSG00000152127.9	transcript	ENST00000281923.4	protein_coding	10/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
MGAT5_chr2_134249072_134459621	134387332	A A	ATATATAT others(25): Show ATATATATATATATATATATATATTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03927.hp2 NA18939.hp2 HG03927.hp2 NA18939.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0077 a0001c0001t0001 a0001c0001t0077	a0001c0001t0001g0090 a0001c0001t0077g0161 a0001c0001t0001g0090 a0001c0001t0077g0161	2	282	0.0071	32	c.138 others(53): Show c.1381-15655_1381-15654insATATATATATATATATATATATTT TTTTTTTT	MGAT5	ENSG00000152127.9	transcript	ENST00000281923.4	protein_coding	10/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
MGA_chr15_41655405_41774940	41725834	C C	CAAAAAAA others(25): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02647.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0001 a0004c0004t0001	a0004c0004t0001g0083 a0004c0004t0001g0083	1	292	0.0034	32	c.343 others(51): Show c.3431-1324_3431-1323insAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAA	MGA	ENSG00000174197.19	transcript	ENST00000703841.1	protein_coding	9/23		INFO_REALIGN_3_PRIME	chr15	TogoVar
MGLL_chr3_127684066_127827515	127742846	T T	TTTTTTTT others(25): Show TTTTTTTTTTTTTTTTTGGGACGAGAGTCCTTC	intron_variant intron_variant	MODIFIER	NA18963.hp1 NA18963.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0283 a0001c0001t0001g0283	1	314	0.0032	32	c.263 others(51): Show c.263-20281_263-20280insGAAGGACTCTCGTCCCAAAAAAAAAA AAAAAA	MGLL	ENSG00000074416.16	transcript	ENST00000265052.10	protein_coding	3/7			chr3	TogoVar
MGMT_chr10_129462241_129775983	129518337	T T	TACACACA others(25): Show TACACACACACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	NA18962.hp2 NA18962.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0023 a0001c0001t0023	a0001c0001t0023g0181 a0001c0001t0023g0181	1	194	0.0052	32	c.-12 others(51): Show c.-12-17898_-12-17867dupCACACACACACACACACACACACACA CACACA	MGMT	ENSG00000170430.10	transcript	ENST00000651593.1	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr10	TogoVar
MGMT_chr10_129462241_129775983	129646719	A A	AATATATA others(25): Show AATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03540.hp1 HG03225.hp2 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0031 a0001c0001t0001 a0001c0001t0031	a0001c0001t0001g0165 a0001c0001t0031g0192 a0001c0001t0001g0165 a0001c0001t0031g0192	2	194	0.0103	32	c.126 others(51): Show c.126-61171_126-61140dupATATATATATATATATATATATATAT ATATAT	MGMT	ENSG00000170430.10	transcript	ENST00000651593.1	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr10	TogoVar

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