Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
PCDH11X_chrX_91774375_92628230	92148173	C C	CTTCCTTC others(25): Show CTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCT	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG01496.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0081 a0001c0001t0003g0081	1	154	0.0065	32	c.303 others(53): Show c.3034-53199_3034-53198insCTTCCTTCCTTCCTTCCTTCTTTC TTTCTTTC	PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	6/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92148173	C C	CTTCCTTC others(25): Show CTTCCTTCCTTCCTTCCTTCTTTCTTTCTTTCT	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0128 a0001c0001t0010g0128	1	154	0.0065	32	c.303 others(53): Show c.3034-53199_3034-53198insCTTCCTTCCTTCCTTCTTTCTTTC TTTCTTTC	PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	6/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92148173	C C	CTTCTTTC others(25): Show CTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	intron_variant intron_variant	MODIFIER	HG03453.hp1 HG03453.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0012 a0001c0003t0012	a0001c0003t0012g0144 a0001c0003t0012g0144	1	154	0.0065	32	c.303 others(53): Show c.3034-53197_3034-53166dupTTCTTTCTTTCTTTCTTTCTTTCT TTCTTTCT	PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	6/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92208508	A A	AATATATA others(25): Show AATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00280.hp1 NA18984.hp1 NA19085.hp1 HG00280.hp1 NA18984.hp1 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0026 a0001c0001t0001 a0001c0001t0003 a0001c0001t0026	a0001c0001t0001g0072 a0001c0001t0003g0123 a0001c0001t0026g0138 a0001c0001t0001g0072 a0001c0001t0003g0123 a0001c0001t0026g0138	3	154	0.0195	32	c.311 others(51): Show c.3114+7082_3114+7083insTATATATATATATATATATATATATA TATATA	PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	7/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92326639	T T	TATATATA others(25): Show TATATATATATATATAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0049 a0001c0001t0002g0049	1	154	0.0065	32	c.314 others(53): Show c.3145-61095_3145-61094insTATATATATATATAGAGAGAGAGA GAGAGAGA	PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	8/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11Y_chrY_4995296_5747224	5373126	C C	CCCTCCCT others(25): Show CCCTCCCTCCCTCCCTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG00609.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0060 a0001c0001t0001g0060	1	115	0.0087	32	c.285 others(55): Show c.2854-127930_2854-127929insCTCCCTCCCTCCCTTCTTTCTT TCTTTCTTTC	PCDH11Y	ENSG00000099715.15	transcript	ENST00000698851.1	protein_coding	3/5		INFO_REALIGN_3_PRIME	chrY	TogoVar
PCDH11Y_chrY_4995296_5747224	5373126	C C	CCCTCCCT others(25): Show CCCTCCCTCCCTCCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01952.hp1 HG03654.hp1 HG01109.hp1 HG01952.hp1 HG03654.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0048 a0001c0001t0001g0058 a0001c0001t0001g0099 a0001c0001t0001g0048 a0001c0001t0001g0058 a0001c0001t0001g0099	3	115	0.0261	32	c.285 others(55): Show c.2854-127930_2854-127929insCTCCCTCCCTCCTTTCTTTCTT TCTTTCTTTC	PCDH11Y	ENSG00000099715.15	transcript	ENST00000698851.1	protein_coding	3/5		INFO_REALIGN_3_PRIME	chrY	TogoVar
PCDH11Y_chrY_4995296_5747224	5373126	C C	CCCTCCCT others(25): Show CCCTCCCTCCTTTCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG00673.hp1 NA18960.hp1 HG00673.hp1 NA18960.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0037 a0001c0001t0001g0066 a0001c0001t0001g0037 a0001c0001t0001g0066	2	115	0.0174	32	c.285 others(55): Show c.2854-127930_2854-127929insCTCCCTCCTTTCTTTCTTTCTT TCTTTCTTTC	PCDH11Y	ENSG00000099715.15	transcript	ENST00000698851.1	protein_coding	3/5		INFO_REALIGN_3_PRIME	chrY	TogoVar
PCDH11Y_chrY_4995296_5747224	5373126	C C	CCCTCCTT others(25): Show CCCTCCTTTCTTTCTTTCTTTCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	NA19085.hp1 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0054 a0001c0001t0001g0054	1	115	0.0087	32	c.285 others(55): Show c.2854-127930_2854-127929insCTCCTTTCTTTCTTTCTTTCTT TCTTTCTTTC	PCDH11Y	ENSG00000099715.15	transcript	ENST00000698851.1	protein_coding	3/5		INFO_REALIGN_3_PRIME	chrY	TogoVar
PCDH15_chr10_53797771_54806231	53855904	G G	GTATATAT others(25): Show GTATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG02027.hp2 HG02145.hp2 HG00642.hp2 HG02027.hp2 HG02145.hp2	a0001 a0004 a0022 a0001 a0004 a0022	a0001c0001 a0004c0004 a0022c0028 a0001c0001 a0004c0004 a0022c0028	a0001c0001t0002 a0004c0004t0002 a0022c0028t0004 a0001c0001t0002 a0004c0004t0002 a0022c0028t0004	a0001c0001t0002g0070 a0004c0004t0002g0096 a0022c0028t0004g0013 a0001c0001t0002g0070 a0004c0004t0002g0096 a0022c0028t0004g0013	3	102	0.0294	32	c.380 others(51): Show c.3806+1270_3806+1271insTATATATATATATATATATATATATA TATATA	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	28/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	53888300	A A	ATACACAT others(25): Show ATACACATATATATATATATGTATATATATACG	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0006	1	102	0.0098	32	c.350 others(53): Show c.3501+14942_3501+14943insCGTATATATATACATATATATATA TATGTGTA	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	26/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54697625	A A	AAAGGAAG others(25): Show AAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG01261.hp1	a0009 a0009	a0009c0008 a0009c0008	a0009c0008t0001 a0009c0008t0001	a0009c0008t0001g0048 a0009c0008t0001g0048	1	102	0.0098	32	c.-28 others(51): Show c.-28-33367_-28-33336dupCCTTCCTTCCTTCCTTCCTTCCTTCC TTCCTT	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	1/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54731563	T T	TATATATA others(25): Show TATATATATATATATATATATATATATGCACAC	intron_variant intron_variant	MODIFIER	HG02145.hp2 NA18906.hp2 HG02145.hp2 NA18906.hp2	a0003 a0022 a0003 a0022	a0003c0003 a0022c0028 a0003c0003 a0022c0028	a0003c0003t0001 a0022c0028t0004 a0003c0003t0001 a0022c0028t0004	a0003c0003t0001g0009 a0022c0028t0004g0013 a0003c0003t0001g0009 a0022c0028t0004g0013	2	102	0.0196	32	c.-28 others(51): Show c.-28-67274_-28-67273insGTGTGCATATATATATATATATATAT ATATAT	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	1/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54804927	T T	TTATATAT others(25): Show TTATATATATATATATATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp2 HG02109.hp2 HG01243.hp2 HG02109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0022 a0001c0001t0001g0090 a0001c0001t0001g0022 a0001c0001t0001g0090	2	102	0.0196	32	c.-40 others(43): Show c.-4032_-4031insTATATATATATATATATATATATATATATATA	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding		3697		chr10	TogoVar
PCDH15_chr10_53816099_54806231	53855904	G G	GTATATAT others(25): Show GTATATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG02027.hp2 HG02145.hp1 HG00642.hp1 HG02027.hp2 HG02145.hp1	a0001 a0004 a0018 a0001 a0004 a0018	a0001c0001 a0004c0044 a0018c0034 a0001c0001 a0004c0044 a0018c0034	a0001c0001t0001 a0004c0044t0001 a0018c0034t0003 a0001c0001t0001 a0004c0044t0001 a0018c0034t0003	a0001c0001t0001g0064 a0004c0044t0001g0088 a0018c0034t0003g0013 a0001c0001t0001g0064 a0004c0044t0001g0088 a0018c0034t0003g0013	3	94	0.0319	32	c.380 others(51): Show c.3806+1270_3806+1271insTATATATATATATATATATATATATA TATATA	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	28/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	53888300	A A	ATACACAT others(25): Show ATACACATATATATATATATGTATATATATACG	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0006	1	94	0.0106	32	c.350 others(53): Show c.3501+14942_3501+14943insCGTATATATATACATATATATATA TATGTGTA	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	26/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54697625	A A	AAAGGAAG others(25): Show AAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01261.hp2	a0007 a0007	a0007c0019 a0007c0019	a0007c0019t0001 a0007c0019t0001	a0007c0019t0001g0045 a0007c0019t0001g0045	1	94	0.0106	32	c.-28 others(51): Show c.-28-33367_-28-33336dupCCTTCCTTCCTTCCTTCCTTCCTTCC TTCCTT	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	1/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54731563	T T	TATATATA others(25): Show TATATATATATATATATATATATATATGCACAC	intron_variant intron_variant	MODIFIER	HG02145.hp1 NA18906.hp2 HG02145.hp1 NA18906.hp2	a0003 a0018 a0003 a0018	a0003c0003 a0018c0034 a0003c0003 a0018c0034	a0003c0003t0001 a0018c0034t0003 a0003c0003t0001 a0018c0034t0003	a0003c0003t0001g0009 a0018c0034t0003g0013 a0003c0003t0001g0009 a0018c0034t0003g0013	2	94	0.0213	32	c.-28 others(51): Show c.-28-67274_-28-67273insGTGTGCATATATATATATATATATAT ATATAT	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	1/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54804927	T T	TTATATAT others(25): Show TTATATATATATATATATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp1 HG01243.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0082 a0001c0001t0001g0082	1	94	0.0106	32	c.-40 others(43): Show c.-4032_-4031insTATATATATATATATATATATATATATATATA	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding		3697		chr10	TogoVar
PCDH19_chrX_100286644_100415273	100322865	A A	ATATATAT others(25): Show ATATATATATATATATATATATATATATTTTTT	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0106 a0001c0001t0002g0106	1	281	0.0036	32	c.284 others(53): Show c.2848+19037_2848+19038insAAAAAATATATATATATATATATA TATATATA	PCDH19	ENSG00000165194.15	transcript	ENST00000373034.8	protein_coding	5/5			chrX	TogoVar
PCDH19_chrX_100286644_100415273	100322865	A A	ATATATAT others(25): Show ATATATATATATATATATATATATTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0101 a0001c0001t0002g0101	1	281	0.0036	32	c.284 others(53): Show c.2848+19037_2848+19038insAAAAAAAAAATATATATATATATA TATATATA	PCDH19	ENSG00000165194.15	transcript	ENST00000373034.8	protein_coding	5/5			chrX	TogoVar
PCDH19_chrX_100286644_100415273	100322865	A A	ATATATAT others(25): Show ATATATATATATATATATATTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03516.hp1 HG03486.hp2 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0260 a0001c0001t0008g0266 a0001c0001t0008g0260 a0001c0001t0008g0266	2	281	0.0071	32	c.284 others(53): Show c.2848+19037_2848+19038insAAAAAAAAAAAAAATATATATATA TATATATA	PCDH19	ENSG00000165194.15	transcript	ENST00000373034.8	protein_coding	5/5			chrX	TogoVar
PCDH19_chrX_100286644_100415273	100333174	G G	GAAGGAAG others(25): Show GAAGGAAGGAAGGGAGAGAGAGAGAGAGAAAGA	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0141 a0001c0001t0011g0141	1	281	0.0036	32	c.284 others(51): Show c.2848+8728_2848+8729insTCTTTCTCTCTCTCTCTCTCCCTTCC TTCCTT	PCDH19	ENSG00000165194.15	transcript	ENST00000373034.8	protein_coding	5/5			chrX	TogoVar
PCDH7_chr4_30715369_31151800	30960147	A A	AAGGGAGG others(25): Show AAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0031 a0001c0001t0031	a0001c0001t0031g0170 a0001c0001t0031g0170	1	214	0.0047	32	c.339 others(53): Show c.3391+39781_3391+39782insGAGGGAGGGAGGGAGGGAGGGAGG GAGGGAGG	PCDH7	ENSG00000169851.16	transcript	ENST00000695919.1	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr4	TogoVar
PCDH7_chr4_30715369_31151800	30960151	A A	AAGGAAGG others(25): Show AAGGAAGGAAGGAAGGAAGGAAGGGAGGGAGGG	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG03453.hp1 NA19030.hp1 HG02559.hp1 HG03453.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0006 a0001c0008 a0001c0001 a0001c0006 a0001c0008	a0001c0001t0001 a0001c0006t0007 a0001c0008t0010 a0001c0001t0001 a0001c0006t0007 a0001c0008t0010	a0001c0001t0001g0169 a0001c0006t0007g0210 a0001c0008t0010g0017 a0001c0001t0001g0169 a0001c0006t0007g0210 a0001c0008t0010g0017	3	214	0.0140	32	c.339 others(53): Show c.3391+39785_3391+39786insAAGGAAGGAAGGAAGGAAGGGAGG GAGGGAGG	PCDH7	ENSG00000169851.16	transcript	ENST00000695919.1	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr4	TogoVar
PCDH7_chr4_30715369_31151800	30960151	A A	AAGGAAGG others(25): Show AAGGAAGGAAGGAAGGAAGGGAGGGAGGGAGGG	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00642.hp2 HG00735.hp1 others(8): Show HG00544.hp2 HG00642.hp2 HG00735.hp1 HG03239.hp1 HG04199.hp1 HG04204.hp1 NA18943.hp1 NA18969.hp2 NA18998.hp2 NA18999.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0018 a0001c0001t0001 a0001c0001t0002 a0001c0001t0018	a0001c0001t0001g0168 a0001c0001t0001g0173 a0001c0001t0001g0175 others(8): Show a0001c0001t0001g0168 a0001c0001t0001g0173 a0001c0001t0001g0175 a0001c0001t0001g0183 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0002g0081 a0001c0001t0002g0085 a0001c0001t0018g0055	11	214	0.0514	32	c.339 others(53): Show c.3391+39785_3391+39786insAAGGAAGGAAGGAAGGGAGGGAGG GAGGGAGG	PCDH7	ENSG00000169851.16	transcript	ENST00000695919.1	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr4	TogoVar
PCDH7_chr4_30715369_31151800	30960151	A A	AAGGAAGG others(25): Show AAGGAAGGAAGGAAGGGAGGGAGGGAGGGAGGG	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG01952.hp2 HG02015.hp1 others(9): Show HG00544.hp1 HG01952.hp2 HG02015.hp1 HG02040.hp1 HG02083.hp1 HG02155.hp1 HG02717.hp1 HG03831.hp2 NA18950.hp2 NA18999.hp1 NA19009.hp2 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(5): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0014 a0001c0001t0027 a0001c0001t0036	a0001c0001t0001g0115 a0001c0001t0003g0058 a0001c0001t0003g0100 others(9): Show a0001c0001t0001g0115 a0001c0001t0003g0058 a0001c0001t0003g0100 a0001c0001t0004g0047 a0001c0001t0004g0059 a0001c0001t0005g0028 a0001c0001t0005g0035 a0001c0001t0005g0045 a0001c0001t0008g0044 a0001c0001t0014g0038 a0001c0001t0027g0031 a0001c0001t0036g0057	12	214	0.0561	32	c.339 others(53): Show c.3391+39785_3391+39786insAAGGAAGGAAGGGAGGGAGGGAGG GAGGGAGG	PCDH7	ENSG00000169851.16	transcript	ENST00000695919.1	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr4	TogoVar
PCDH7_chr4_30715369_31151800	30960151	A A	AAGGAAGG others(25): Show AAGGAAGGAAGGGAGGGAGGGAGGGAGGGAGGG	intron_variant intron_variant	MODIFIER	HG06807.hp1 NA18975.hp2 HG06807.hp1 NA18975.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0005c0014 a0001c0001 a0005c0014	a0001c0001t0002 a0005c0014t0010 a0001c0001t0002 a0005c0014t0010	a0001c0001t0002g0060 a0005c0014t0010g0108 a0001c0001t0002g0060 a0005c0014t0010g0108	2	214	0.0094	32	c.339 others(53): Show c.3391+39785_3391+39786insAAGGAAGGGAGGGAGGGAGGGAGG GAGGGAGG	PCDH7	ENSG00000169851.16	transcript	ENST00000695919.1	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr4	TogoVar
PCDH7_chr4_30715369_31151800	31079333	T T	TATATATA others(25): Show TATATATATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	NA19009.hp1 NA19009.hp1	a0004 a0004	a0004c0017 a0004c0017	a0004c0017t0003 a0004c0017t0003	a0004c0017t0003g0190 a0004c0017t0003g0190	1	214	0.0047	32	c.339 others(53): Show c.3392-63138_3392-63107dupTATATATATATATATATATATATA TATATACA	PCDH7	ENSG00000169851.16	transcript	ENST00000695919.1	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr4	TogoVar
PCDH7_chr4_30715369_31151800	31150365	A A	ATTTTTCT others(25): Show ATTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02145.hp2 HG03704.hp1 NA19030.hp2 HG02145.hp2 HG03704.hp1 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0026 a0001c0003t0012 a0001c0001t0026 a0001c0003t0012	a0001c0001t0026g0029 a0001c0003t0012g0003 a0001c0003t0012g0006 a0001c0001t0026g0029 a0001c0003t0012g0003 a0001c0003t0012g0006	3	214	0.0140	32	c.75 others(43): Show c.7516_*7517insTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTT	PCDH7	ENSG00000169851.16	transcript	ENST00000695919.1	protein_coding		3566		chr4	TogoVar
PCDH9_chr13_66297834_67235336	66779873	A A	ATATATAT others(25): Show ATATATATATATATACACATATATGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0003 a0003	a0003c0010 a0003c0010	a0003c0010t0007 a0003c0010t0007	a0003c0010t0007g0001 a0003c0010t0007g0001	1	80	0.0125	32	c.313 others(55): Show c.3138+123630_3138+123631insCACACACACATATATGTGTATA TATATATATA	PCDH9	ENSG00000184226.15	transcript	ENST00000377865.7	protein_coding	3/4			chr13	TogoVar
PCDH9_chr13_66297834_67235336	66932681	T T	TATATATA others(25): Show TATATATATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0058 a0001c0001t0012g0058	1	80	0.0125	32	c.303 others(53): Show c.3037-29077_3037-29076insGTATATATATATATATATATATAT ATATATAT	PCDH9	ENSG00000184226.15	transcript	ENST00000377865.7	protein_coding	2/4			chr13	TogoVar
PCDH9_chr13_66297834_67235336	67216683	C C	CATATATA others(25): Show CATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01167.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0005 a0001c0003t0005	a0001c0003t0005g0045 a0001c0003t0005g0045	1	80	0.0125	32	c.303 others(51): Show c.3036+8721_3036+8722insATATATATATATATATATATATATAT ATATAT	PCDH9	ENSG00000184226.15	transcript	ENST00000377865.7	protein_coding	2/4			chr13	TogoVar
PCDHA10_chr5_140850897_141017347	140925082	A A	AAAGGAAG others(25): Show AAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00280.hp1	a0010 a0010	a0010c0029 a0010c0029	a0010c0029t0001 a0010c0029t0001	a0010c0029t0001g0012 a0010c0029t0001g0012	1	260	0.0039	32	c.238 others(53): Show c.2389-53842_2389-53841insAGGAAGGAAGGAAGGAAGGAAGGA AGGAAGGA	PCDHA10	ENSG00000250120.8	transcript	ENST00000307360.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA10_chr5_140850897_141017347	140946611	A A	AATATATA others(25): Show AATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00642.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0041 a0003c0003t0001g0041	1	260	0.0039	32	c.238 others(53): Show c.2389-32317_2389-32316insTATATATATATATATATATATATA TATATATA	PCDHA10	ENSG00000250120.8	transcript	ENST00000307360.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA10_chr5_140850897_141017347	140946631	T T	TATATATA others(25): Show TATATATATATATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0001 a0005c0005t0001	a0005c0005t0001g0081 a0005c0005t0001g0081	1	260	0.0039	32	c.238 others(53): Show c.2389-32317_2389-32316insTATATATATATATATATATATATA TATACACA	PCDHA10	ENSG00000250120.8	transcript	ENST00000307360.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA10_chr5_140850897_141017347	140946631	T T	TATATATA others(25): Show TATATATATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG03579.hp2 NA19030.hp2 HG03579.hp2 NA19030.hp2	a0003 a0019 a0003 a0019	a0003c0018 a0019c0016 a0003c0018 a0019c0016	a0003c0018t0002 a0019c0016t0001 a0003c0018t0002 a0019c0016t0001	a0003c0018t0002g0029 a0019c0016t0001g0043 a0003c0018t0002g0029 a0019c0016t0001g0043	2	260	0.0077	32	c.238 others(53): Show c.2389-32317_2389-32316insTATATATATATATATATATATATA TATATACA	PCDHA10	ENSG00000250120.8	transcript	ENST00000307360.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA11_chr5_140863957_141017347	140925082	A A	AAAGGAAG others(25): Show AAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00280.hp2	a0006 a0006	a0006c0016 a0006c0016	a0006c0016t0001 a0006c0016t0001	a0006c0016t0001g0001 a0006c0016t0001g0001	1	260	0.0039	32	c.239 others(53): Show c.2391+53613_2391+53614insAGGAAGGAAGGAAGGAAGGAAGGA AGGAAGGA	PCDHA11	ENSG00000249158.7	transcript	ENST00000398640.7	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA11_chr5_140863957_141017347	140946611	A A	AATATATA others(25): Show AATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00642.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0141 a0001c0004t0001g0141	1	260	0.0039	32	c.239 others(53): Show c.2392-32317_2392-32316insTATATATATATATATATATATATA TATATATA	PCDHA11	ENSG00000249158.7	transcript	ENST00000398640.7	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA11_chr5_140863957_141017347	140946631	T T	TATATATA others(25): Show TATATATATATATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0161 a0001c0002t0001g0161	1	260	0.0039	32	c.239 others(53): Show c.2392-32317_2392-32316insTATATATATATATATATATATATA TATACACA	PCDHA11	ENSG00000249158.7	transcript	ENST00000398640.7	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA11_chr5_140863957_141017347	140946631	T T	TATATATA others(25): Show TATATATATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG03579.hp1 NA19030.hp1 HG03579.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0249 a0001c0001t0002g0112 a0001c0001t0001g0249 a0001c0001t0002g0112	2	260	0.0077	32	c.239 others(53): Show c.2392-32317_2392-32316insTATATATATATATATATATATATA TATATACA	PCDHA11	ENSG00000249158.7	transcript	ENST00000398640.7	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA12_chr5_140870308_141017347	140925082	A A	AAAGGAAG others(25): Show AAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00280.hp1	a0013 a0013	a0013c0026 a0013c0026	a0013c0026t0017 a0013c0026t0017	a0013c0026t0017g0113 a0013c0026t0017g0113	1	260	0.0039	32	c.236 others(53): Show c.2367+47268_2367+47269insAGGAAGGAAGGAAGGAAGGAAGGA AGGAAGGA	PCDHA12	ENSG00000251664.5	transcript	ENST00000398631.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA12_chr5_140870308_141017347	140946611	A A	AATATATA others(25): Show AATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00642.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0145 a0001c0001t0001g0145	1	260	0.0039	32	c.236 others(53): Show c.2368-32317_2368-32316insTATATATATATATATATATATATA TATATATA	PCDHA12	ENSG00000251664.5	transcript	ENST00000398631.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA12_chr5_140870308_141017347	140946631	T T	TATATATA others(25): Show TATATATATATATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0130 a0001c0002t0001g0130	1	260	0.0039	32	c.236 others(53): Show c.2368-32317_2368-32316insTATATATATATATATATATATATA TATACACA	PCDHA12	ENSG00000251664.5	transcript	ENST00000398631.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA12_chr5_140870308_141017347	140946631	T T	TATATATA others(25): Show TATATATATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG03579.hp2 NA19030.hp1 HG03579.hp2 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0021 a0001c0001 a0001c0021	a0001c0001t0001 a0001c0021t0002 a0001c0001t0001 a0001c0021t0002	a0001c0001t0001g0227 a0001c0021t0002g0110 a0001c0001t0001g0227 a0001c0021t0002g0110	2	260	0.0077	32	c.236 others(53): Show c.2368-32317_2368-32316insTATATATATATATATATATATATA TATATACA	PCDHA12	ENSG00000251664.5	transcript	ENST00000398631.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA13_chr5_140877124_141017347	140925082	A A	AAAGGAAG others(25): Show AAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00280.hp2	a0009 a0009	a0009c0023 a0009c0023	a0009c0023t0001 a0009c0023t0001	a0009c0023t0001g0004 a0009c0023t0001g0004	1	260	0.0039	32	c.239 others(53): Show c.2394+40445_2394+40446insAGGAAGGAAGGAAGGAAGGAAGGA AGGAAGGA	PCDHA13	ENSG00000239389.8	transcript	ENST00000289272.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA13_chr5_140877124_141017347	140946611	A A	AATATATA others(25): Show AATATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00642.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0154 a0001c0001t0001g0154	1	260	0.0039	32	c.239 others(53): Show c.2395-32317_2395-32316insTATATATATATATATATATATATA TATATATA	PCDHA13	ENSG00000239389.8	transcript	ENST00000289272.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA13_chr5_140877124_141017347	140946631	T T	TATATATA others(25): Show TATATATATATATATATATATATATATATACAC	intron_variant intron_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0143 a0001c0004t0001g0143	1	260	0.0039	32	c.239 others(53): Show c.2395-32317_2395-32316insTATATATATATATATATATATATA TATACACA	PCDHA13	ENSG00000239389.8	transcript	ENST00000289272.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA13_chr5_140877124_141017347	140946631	T T	TATATATA others(25): Show TATATATATATATATATATATATATATATATAC	intron_variant intron_variant	MODIFIER	HG03579.hp2 NA19030.hp2 HG03579.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0257 a0001c0001t0002g0119 a0001c0001t0001g0257 a0001c0001t0002g0119	2	260	0.0077	32	c.239 others(53): Show c.2395-32317_2395-32316insTATATATATATATATATATATATA TATATACA	PCDHA13	ENSG00000239389.8	transcript	ENST00000289272.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA1_chr5_140781140_141017347	140925082	A A	AAAGGAAG others(25): Show AAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00280.hp1	a0014 a0014	a0014c0018 a0014c0018	a0014c0018t0001 a0014c0018t0001	a0014c0018t0001g0100 a0014c0018t0001g0100	1	200	0.0050	32	c.239 others(53): Show c.2395-53842_2395-53841insAGGAAGGAAGGAAGGAAGGAAGGA AGGAAGGA	PCDHA1	ENSG00000204970.10	transcript	ENST00000504120.4	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar

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