| regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SCG5_chr15_32636710_32702092 | 32657209 | A | ATATATAT others(25): Show |
intron_variant | MODIFIER | HG01975.hp2 HG02895.hp1 NA19030.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0008 | a0001c0001t0001g0081a0001c0001t0003g0385a0001c0001t0008g0188 | 3 | 415 | 0.0072 | 32 | c.226 others(51): Show |
SCG5 | ENSG00000166922.9 | transcript | ENST00000300175.9 | protein_coding | 2/5 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
| SCGB2B2_chr19_34585644_34682159 | 34608660 | C | CATATATA others(25): Show |
intron_variant | MODIFIER | HG00544.hp1 HG01975.hp2 HG02273.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0006a0001c0001t0030others(1): Show | a0001c0001t0002g0262a0001c0001t0006g0155a0001c0001t0030g0234others(1): Show | 4 | 370 | 0.0108 | 32 | c.-20 others(55): Show |
SCGB2B2 | ENSG00000205209.8 | transcript | ENST00000601241.6 | protein_coding | 1/3 | chr19 | TogoVar | ||||||
| SCGB2B2_chr19_34585644_34682159 | 34608684 | T | TATATATA others(25): Show |
intron_variant | MODIFIER | HG02698.hp1 | a0001 | a0001c0001 | a0001c0001t0024 | a0001c0001t0024g0349 | 1 | 370 | 0.0027 | 32 | c.-20 others(55): Show |
SCGB2B2 | ENSG00000205209.8 | transcript | ENST00000601241.6 | protein_coding | 1/3 | chr19 | TogoVar | ||||||
| SCGB2B2_chr19_34585644_34682159 | 34669714 | T | TACACACA others(25): Show |
intron_variant | MODIFIER | HG02055.hp2 HG02486.hp1 HG02630.hp2 others(5): Show |
a0001a0003 | a0001c0001a0003c0005 | a0001c0001t0005a0001c0001t0012a0001c0001t0015others(5): Show | a0001c0001t0005g0084a0001c0001t0012g0198a0001c0001t0015g0195others(5): Show | 8 | 370 | 0.0216 | 32 | c.-20 others(53): Show |
SCGB2B2 | ENSG00000205209.8 | transcript | ENST00000601241.6 | protein_coding | 1/3 | chr19 | TogoVar | ||||||
| SCHIP1_chr3_159268244_159902359 | 159550058 | C | CTTAATTA others(25): Show |
intron_variant | MODIFIER | HG00642.hp2 HG01167.hp2 HG01169.hp2 others(18): Show |
a0001a0003 | a0001c0001a0001c0002a0003c0005 | a0001c0001t0001a0001c0002t0001a0003c0005t0001 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0009others(18): Show | 21 | 100 | 0.2100 | 32 | c.64- others(51): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
| SCHIP1_chr3_159268244_159902359 | 159828367 | A | ATATATAT others(25): Show |
intron_variant | MODIFIER | NA18522.hp2 NA19043.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0027a0001c0001t0001g0049 | 2 | 100 | 0.0200 | 32 | c.760 others(51): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
| SCIN_chr7_12565720_12665182 | 12578909 | G | GTTTTTTT others(25): Show |
intron_variant | MODIFIER | HG01257.hp2 | a0002 | a0002c0002 | a0002c0002t0133 | a0002c0002t0133g0289 | 1 | 372 | 0.0027 | 32 | c.354 others(47): Show |
SCIN | ENSG00000006747.15 | transcript | ENST00000297029.10 | protein_coding | 2/15 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
| SCIN_chr7_12565720_12665182 | 12578909 | G | GTTTTTTT others(25): Show |
intron_variant | MODIFIER | NA18981.hp1 | a0001 | a0001c0001 | a0001c0001t0251 | a0001c0001t0251g0024 | 1 | 372 | 0.0027 | 32 | c.354 others(47): Show |
SCIN | ENSG00000006747.15 | transcript | ENST00000297029.10 | protein_coding | 2/15 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
| SCIN_chr7_12565720_12665182 | 12578909 | G | GTTTTTTT others(25): Show |
intron_variant | MODIFIER | NA19064.hp1 | a0001 | a0001c0001 | a0001c0001t0137 | a0001c0001t0137g0029 | 1 | 372 | 0.0027 | 32 | c.354 others(47): Show |
SCIN | ENSG00000006747.15 | transcript | ENST00000297029.10 | protein_coding | 2/15 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
| SCLT1_chr4_128878993_129098539 | 128975040 | C | CTTTTTTT others(25): Show |
intron_variant | MODIFIER | HG01981.hp2 HG02155.hp2 HG03486.hp2 others(2): Show |
a0001 | a0001c0002a0001c0004 | a0001c0002t0001a0001c0004t0001 | a0001c0002t0001g0106a0001c0004t0001g0113a0001c0004t0001g0114others(2): Show | 5 | 288 | 0.0174 | 32 | c.687 others(49): Show |
SCLT1 | ENSG00000151466.12 | transcript | ENST00000281142.10 | protein_coding | 9/20 | chr4 | TogoVar | ||||||
| SCML4_chr6_107697154_107829313 | 107778222 | A | AAAAAAAA others(25): Show |
intron_variant | MODIFIER | HG03225.hp2 | a0001 | a0001c0001 | a0001c0001t0014 | a0001c0001t0014g0125 | 1 | 250 | 0.0040 | 32 | c.-59 others(49): Show |
SCML4 | ENSG00000146285.15 | transcript | ENST00000369020.8 | protein_coding | 1/7 | chr6 | TogoVar | ||||||
| SCML4_chr6_107697154_107829313 | 107778222 | A | AAAAAAAA others(25): Show |
intron_variant | MODIFIER | NA19043.hp2 | a0001 | a0001c0001 | a0001c0001t0006 | a0001c0001t0006g0046 | 1 | 250 | 0.0040 | 32 | c.-59 others(49): Show |
SCML4 | ENSG00000146285.15 | transcript | ENST00000369020.8 | protein_coding | 1/7 | chr6 | TogoVar | ||||||
| SCN10A_chr3_38691807_38821217 | 38737798 | C | CTCTTTCT others(25): Show |
intron_variant | MODIFIER | HG02056.hp2 HG02135.hp2 HG02148.hp1 others(10): Show |
a0001a0002a0028 | a0001c0003a0001c0006a0001c0007others(3): Show | a0001c0003t0001a0001c0003t0002a0001c0006t0002others(4): Show | a0001c0003t0001g0014a0001c0003t0001g0015a0001c0003t0001g0033others(10): Show | 13 | 372 | 0.0350 | 32 | c.228 others(51): Show |
SCN10A | ENSG00000185313.9 | transcript | ENST00000449082.3 | protein_coding | 15/27 | chr3 | TogoVar | ||||||
| SCN10A_chr3_38691807_38821217 | 38746063 | G | GTGTATAT others(25): Show |
intron_variant | MODIFIER | HG00423.hp1 HG00609.hp2 HG01168.hp1 others(11): Show |
a0002a0025a0028 | a0002c0001a0025c0041a0028c0037 | a0002c0001t0001a0002c0001t0002a0025c0041t0001others(1): Show | a0002c0001t0001g0063a0002c0001t0001g0123a0002c0001t0001g0126others(11): Show | 14 | 372 | 0.0376 | 32 | c.186 others(51): Show |
SCN10A | ENSG00000185313.9 | transcript | ENST00000449082.3 | protein_coding | 13/27 | chr3 | TogoVar | ||||||
| SCN11A_chr3_38840764_39056944 | 38995799 | G | GTCTATCT others(25): Show |
intron_variant | MODIFIER | HG02895.hp2 HG02897.hp2 HG03516.hp2 others(1): Show |
a0001 | a0001c0005 | a0001c0005t0001 | a0001c0005t0001g0250a0001c0005t0001g0254a0001c0005t0001g0255others(1): Show | 4 | 314 | 0.0127 | 32 | c.-27 others(53): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 2/29 | chr3 | TogoVar | ||||||
| SCN11A_chr3_38840764_39056944 | 38995799 | G | GTCTATCT others(25): Show |
intron_variant | MODIFIER | HG01109.hp2 NA20129.hp1 |
a0001 | a0001c0005 | a0001c0005t0001 | a0001c0005t0001g0243a0001c0005t0001g0244 | 2 | 314 | 0.0064 | 32 | c.-27 others(53): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 2/29 | chr3 | TogoVar | ||||||
| SCN11A_chr3_38840764_39056944 | 38995799 | G | GTCTATCT others(25): Show |
intron_variant | MODIFIER | HG02647.hp2 | a0001 | a0001c0006 | a0001c0006t0001 | a0001c0006t0001g0313 | 1 | 314 | 0.0032 | 32 | c.-27 others(53): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 2/29 | chr3 | TogoVar | ||||||
| SCN11A_chr3_38840764_39056944 | 38995819 | G | GTCTATCT others(25): Show |
intron_variant | MODIFIER | NA18940.hp2 NA18964.hp1 |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0002a0002c0003t0001 | a0001c0001t0002g0004a0002c0003t0001g0035 | 2 | 314 | 0.0064 | 32 | c.-27 others(53): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 2/29 | chr3 | TogoVar | ||||||
| SCN1A_chr2_165980813_166133020 | 166050613 | G | GTATATAT others(25): Show |
intron_variant | MODIFIER | NA18522.hp1 NA19002.hp2 NA20805.hp1 |
a0001a0002 | a0001c0003a0002c0002 | a0001c0003t0020a0002c0002t0010a0002c0002t0027 | a0001c0003t0020g0329a0002c0002t0010g0326a0002c0002t0027g0152 | 3 | 356 | 0.0084 | 32 | c.964 others(49): Show |
SCN1A | ENSG00000144285.23 | transcript | ENST00000674923.1 | protein_coding | 9/28 | chr2 | TogoVar | ||||||
| SCN1A_chr2_165980813_166133020 | 166050629 | A | ATATATAT others(25): Show |
intron_variant | MODIFIER | HG03453.hp1 | a0001 | a0001c0001 | a0001c0001t0024 | a0001c0001t0024g0293 | 1 | 356 | 0.0028 | 32 | c.964 others(49): Show |
SCN1A | ENSG00000144285.23 | transcript | ENST00000674923.1 | protein_coding | 9/28 | chr2 | TogoVar | ||||||
| SCN1A_chr2_165980813_166133020 | 166072789 | T | TTTCCTTC others(25): Show |
intron_variant | MODIFIER | HG00558.hp2 HG01074.hp1 HG01261.hp1 others(8): Show |
a0001a0002 | a0001c0001a0001c0004a0002c0002 | a0001c0001t0006a0001c0001t0031a0001c0001t0051others(5): Show | a0001c0001t0006g0290a0001c0001t0031g0346a0001c0001t0031g0347others(8): Show | 11 | 356 | 0.0309 | 32 | c.264 others(47): Show |
SCN1A | ENSG00000144285.23 | transcript | ENST00000674923.1 | protein_coding | 4/28 | chr2 | TogoVar | ||||||
| SCN4A_chr17_63933554_63977918 | 63961874 | A | ACCTCCTC others(25): Show |
intron_variant | MODIFIER | HG01934.hp2 HG02055.hp1 HG02896.hp1 others(4): Show |
a0001 | a0001c0013a0001c0025a0001c0038 | a0001c0013t0003a0001c0013t0007a0001c0025t0008others(1): Show | a0001c0013t0003g0011a0001c0013t0007g0260a0001c0025t0008g0259others(2): Show | 7 | 356 | 0.0197 | 32 | c.160 others(49): Show |
SCN4A | ENSG00000007314.12 | transcript | ENST00000435607.3 | protein_coding | 10/23 | chr17 | TogoVar | ||||||
| SCN5A_chr3_38543062_38654687 | 38585662 | G | GGTGTGTG others(25): Show |
intron_variant | MODIFIER | HG00423.hp2 HG03139.hp2 NA18939.hp2 others(2): Show |
a0001a0002 | a0001c0003a0001c0012a0001c0022others(1): Show | a0001c0003t0006a0001c0012t0001a0001c0022t0006others(1): Show | a0001c0003t0006g0171a0001c0012t0001g0040a0001c0022t0006g0240others(2): Show | 5 | 340 | 0.0147 | 32 | c.278 others(47): Show |
SCN5A | ENSG00000183873.18 | transcript | ENST00000413689.6 | protein_coding | 16/27 | chr3 | TogoVar | ||||||
| SCN7A_chr2_166398573_166499249 | 166475104 | G | GTATATAT others(25): Show |
intron_variant | MODIFIER | NA20129.hp2 | a0001 | a0001c0001 | a0001c0001t0020 | a0001c0001t0020g0370 | 1 | 394 | 0.0025 | 32 | c.235 others(47): Show |
SCN7A | ENSG00000136546.17 | transcript | ENST00000643258.1 | protein_coding | 3/25 | chr2 | TogoVar | ||||||
| SCN7A_chr2_166398573_166499249 | 166475122 | A | ATATATAC others(25): Show |
intron_variant | MODIFIER | HG00140.hp2 HG00323.hp1 HG00609.hp2 others(35): Show |
a0001a0024 | a0001c0001a0001c0012a0024c0027 | a0001c0001t0001a0001c0001t0003a0001c0001t0012others(3): Show | a0001c0001t0001g0015a0001c0001t0001g0297a0001c0001t0001g0299others(34): Show | 38 | 394 | 0.0965 | 32 | c.235 others(47): Show |
SCN7A | ENSG00000136546.17 | transcript | ENST00000643258.1 | protein_coding | 3/25 | chr2 | TogoVar | ||||||
| SCN8A_chr12_51586233_51817864 | 51721081 | T | TTATATAT others(25): Show |
intron_variant | MODIFIER | HG03130.hp2 NA18974.hp2 |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0006 | a0001c0001t0003g0015a0001c0001t0006g0202 | 2 | 202 | 0.0099 | 32 | c.163 others(49): Show |
SCN8A | ENSG00000196876.19 | transcript | ENST00000354534.11 | protein_coding | 11/26 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
| SCNN1B_chr16_23297302_23386294 | 23343475 | A | AAAGGAAG others(25): Show |
intron_variant | MODIFIER | HG01884.hp1 HG03209.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001a0001c0001t0001g0108 | 2 | 306 | 0.0065 | 32 | c.-8- others(47): Show |
SCNN1B | ENSG00000168447.11 | transcript | ENST00000343070.7 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
| SCNN1D_chr1_1275436_1297025 | 1288086 | C | CAGGGGGT others(25): Show |
intron_variant | MODIFIER | HG02622.hp2 HG02886.hp2 HG02895.hp1 |
a0005 | a0005c0011 | a0005c0011t0001 | a0005c0011t0001g0156a0005c0011t0001g0157a0005c0011t0001g0158 | 3 | 290 | 0.0103 | 32 | c.166 others(47): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | chr1 | TogoVar | ||||||
| SCNN1D_chr1_1275436_1297025 | 1288227 | C | CTGCTCCG others(25): Show |
intron_variant | MODIFIER | HG03490.hp1 NA18967.hp2 NA18970.hp1 others(2): Show |
a0003 | a0003c0004 | a0003c0004t0003 | a0003c0004t0003g0134a0003c0004t0003g0144a0003c0004t0003g0145others(2): Show | 5 | 290 | 0.0172 | 32 | c.166 others(49): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
| SCNN1D_chr1_1275436_1297025 | 1289928 | C | CCGTGTCT others(25): Show |
intron_variant | MODIFIER | HG02559.hp2 | a0025 | a0025c0044 | a0025c0044t0003 | a0025c0044t0003g0257 | 1 | 290 | 0.0035 | 32 | c.166 others(49): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
| SCNN1G_chr16_23177745_23221883 | 23204332 | T | TACATATA others(25): Show |
intron_variant | MODIFIER | NA18948.hp2 | a0001 | a0001c0002 | a0001c0002t0003 | a0001c0002t0003g0299 | 1 | 320 | 0.0031 | 32 | c.107 others(51): Show |
SCNN1G | ENSG00000166828.3 | transcript | ENST00000300061.3 | protein_coding | 6/12 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
| SCNN1G_chr16_23177745_23221883 | 23204332 | T | TACATATA others(25): Show |
intron_variant | MODIFIER | NA18945.hp1 | a0001 | a0001c0002 | a0001c0002t0003 | a0001c0002t0003g0294 | 1 | 320 | 0.0031 | 32 | c.107 others(51): Show |
SCNN1G | ENSG00000166828.3 | transcript | ENST00000300061.3 | protein_coding | 6/12 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
| SCNN1G_chr16_23177745_23221883 | 23204334 | T | TACATATA others(25): Show |
intron_variant | MODIFIER | HG00642.hp1 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0114 | 1 | 320 | 0.0031 | 32 | c.107 others(51): Show |
SCNN1G | ENSG00000166828.3 | transcript | ENST00000300061.3 | protein_coding | 6/12 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
| SCNN1G_chr16_23177745_23221883 | 23204334 | T | TATATATA others(25): Show |
intron_variant | MODIFIER | HG03704.hp1 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0247 | 1 | 320 | 0.0031 | 32 | c.107 others(51): Show |
SCNN1G | ENSG00000166828.3 | transcript | ENST00000300061.3 | protein_coding | 6/12 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
| SCNN1G_chr16_23177745_23221883 | 23204334 | T | TATATATA others(25): Show |
intron_variant | MODIFIER | HG02080.hp2 NA18966.hp1 |
a0001 | a0001c0002 | a0001c0002t0003 | a0001c0002t0003g0280a0001c0002t0003g0306 | 2 | 320 | 0.0063 | 32 | c.107 others(51): Show |
SCNN1G | ENSG00000166828.3 | transcript | ENST00000300061.3 | protein_coding | 6/12 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
| SCUBE1_chr22_43192280_43348372 | 43192588 | A | ACGTATAT others(25): Show |
downstream_gene_variant | MODIFIER | HG00280.hp2 HG01346.hp1 HG01981.hp1 others(3): Show |
a0001a0002 | a0001c0003a0001c0054a0002c0002 | a0001c0003t0003a0001c0003t0064a0001c0054t0030others(1): Show | a0001c0003t0003g0127a0001c0003t0003g0140a0001c0003t0064g0167others(3): Show | 6 | 280 | 0.0214 | 32 | c.*11 others(45): Show |
SCUBE1 | ENSG00000159307.20 | transcript | ENST00000360835.9 | protein_coding | 4691 | chr22 | TogoVar | ||||||
| SCUBE1_chr22_43192280_43348372 | 43192591 | C | CGTATATA others(25): Show |
downstream_gene_variant | MODIFIER | HG03225.hp1 | a0001 | a0001c0008 | a0001c0008t0032 | a0001c0008t0032g0010 | 1 | 280 | 0.0036 | 32 | c.*11 others(45): Show |
SCUBE1 | ENSG00000159307.20 | transcript | ENST00000360835.9 | protein_coding | 4688 | chr22 | TogoVar | ||||||
| SCUBE1_chr22_43192280_43348372 | 43192591 | C | CGTATATA others(25): Show |
downstream_gene_variant | MODIFIER | HG00544.hp1 HG00597.hp1 HG02015.hp1 others(16): Show |
a0002a0003a0008others(2): Show | a0002c0002a0003c0007a0008c0017others(2): Show | a0002c0002t0002a0002c0002t0024a0002c0002t0059others(7): Show | a0002c0002t0002g0036a0002c0002t0002g0080a0002c0002t0002g0096others(16): Show | 19 | 280 | 0.0679 | 32 | c.*11 others(45): Show |
SCUBE1 | ENSG00000159307.20 | transcript | ENST00000360835.9 | protein_coding | 4688 | chr22 | TogoVar | ||||||
| SCUBE1_chr22_43192280_43348372 | 43192592 | G | GTATATAT others(25): Show |
downstream_gene_variant | MODIFIER | HG02615.hp1 HG03453.hp2 HG03579.hp1 |
a0001a0003 | a0001c0006a0001c0010a0003c0001 | a0001c0006t0075a0001c0010t0092a0003c0001t0085 | a0001c0006t0075g0024a0001c0010t0092g0274a0003c0001t0085g0267 | 3 | 280 | 0.0107 | 32 | c.*11 others(45): Show |
SCUBE1 | ENSG00000159307.20 | transcript | ENST00000360835.9 | protein_coding | 4687 | chr22 | TogoVar | ||||||
| SCUBE1_chr22_43192280_43348372 | 43341083 | A | ACACACAC others(25): Show |
intron_variant | MODIFIER | HG02055.hp2 HG02258.hp2 HG03041.hp2 others(1): Show |
a0001a0002 | a0001c0004a0001c0020a0002c0002 | a0001c0004t0016a0001c0020t0017a0002c0002t0018 | a0001c0004t0016g0015a0001c0020t0017g0014a0002c0002t0018g0011others(1): Show | 4 | 280 | 0.0143 | 32 | c.89- others(47): Show |
SCUBE1 | ENSG00000159307.20 | transcript | ENST00000360835.9 | protein_coding | 1/21 | chr22 | TogoVar | ||||||
| SCUBE2_chr11_9014476_9096599 | 9054725 | A | ATATATAT others(25): Show |
intron_variant | MODIFIER | HG01943.hp1 HG02080.hp2 |
a0003a0012 | a0003c0003a0012c0016 | a0003c0003t0021a0012c0016t0007 | a0003c0003t0021g0180a0012c0016t0007g0216 | 2 | 358 | 0.0056 | 32 | c.120 others(49): Show |
SCUBE2 | ENSG00000175356.14 | transcript | ENST00000649792.2 | protein_coding | 10/22 | chr11 | TogoVar | ||||||
| SCUBE2_chr11_9014476_9096599 | 9054725 | A | ATATATAT others(25): Show |
intron_variant | MODIFIER | HG01109.hp2 | a0002 | a0002c0002 | a0002c0002t0015 | a0002c0002t0015g0100 | 1 | 358 | 0.0028 | 32 | c.120 others(49): Show |
SCUBE2 | ENSG00000175356.14 | transcript | ENST00000649792.2 | protein_coding | 10/22 | chr11 | TogoVar | ||||||
| SCX_chr8_144261453_144273481 | 144262743 | A | ACACCCCT others(25): Show |
upstream_gene_variant | MODIFIER | HG01891.hp2 HG02055.hp1 HG02109.hp2 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 15 | 440 | 0.0341 | 32 | c.-38 others(43): Show |
SCX | ENSG00000260428.3 | transcript | ENST00000567180.3 | protein_coding | 3709 | chr8 | TogoVar | ||||||
| SCX_chr8_144261453_144273481 | 144262804 | C | CCCCCCCC others(25): Show |
upstream_gene_variant | MODIFIER | HG01123.hp1 HG02257.hp2 HG02280.hp1 others(15): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0003others(1): Show | 18 | 440 | 0.0409 | 32 | c.-38 others(43): Show |
SCX | ENSG00000260428.3 | transcript | ENST00000567180.3 | protein_coding | 3648 | chr8 | TogoVar | ||||||
| SCX_chr8_144261453_144273481 | 144262805 | C | CCCCCCCC others(25): Show |
upstream_gene_variant | MODIFIER | NA19240.hp1 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0011 | 1 | 440 | 0.0023 | 32 | c.-38 others(43): Show |
SCX | ENSG00000260428.3 | transcript | ENST00000567180.3 | protein_coding | 3647 | chr8 | TogoVar | ||||||
| SCYGR8_chr2_227740894_227751220 | 227749841 | A | ATCCTTCC others(25): Show |
downstream_gene_variant | MODIFIER | HG00280.hp2 HG00323.hp2 HG00408.hp1 others(31): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0006a0002c0002others(3): Show | a0001c0001t0000a0001c0006t0000a0002c0002t0000others(3): Show | a0001c0001t0000g0000a0001c0006t0000g0000a0002c0002t0000g0000others(3): Show | 34 | 457 | 0.0744 | 32 | c.*36 others(43): Show |
SCYGR8 | ENSG00000284635.2 | transcript | ENST00000641981.2 | protein_coding | 3622 | chr2 | TogoVar | ||||||
| SCYL1_chr11_65520083_65543704 | 65520956 | C | CTGTTAGC others(25): Show |
upstream_gene_variant | MODIFIER | NA19057.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | 1 | 278 | 0.0036 | 32 | c.-41 others(43): Show |
SCYL1 | ENSG00000142186.18 | transcript | ENST00000270176.10 | protein_coding | 4126 | chr11 | TogoVar | ||||||
| SCYL3_chr1_169844631_169898896 | 169851045 | C | CTTTTTTT others(25): Show |
3_prime_UTR_variant | MODIFIER | HG01256.hp2 | a0001 | a0001c0001 | a0001c0001t0087 | a0001c0001t0087g0308 | 1 | 418 | 0.0024 | 32 | c.*26 others(43): Show |
SCYL3 | ENSG00000000457.14 | transcript | ENST00000367771.11 | protein_coding | 13/13 | 2667 | chr1 | TogoVar | |||||
| SDAD1_chr4_75944915_75995945 | 75945783 | T | TTTCCCAG others(25): Show |
downstream_gene_variant | MODIFIER | HG01516.hp2 | a0002 | a0002c0003 | a0002c0003t0004 | a0002c0003t0004g0035 | 1 | 376 | 0.0027 | 32 | c.*49 others(43): Show |
SDAD1 | ENSG00000198301.12 | transcript | ENST00000356260.10 | protein_coding | 4131 | chr4 | TogoVar | ||||||
| SDAD1_chr4_75944915_75995945 | 75994045 | A | ATAATATA others(25): Show |
upstream_gene_variant | MODIFIER | HG02970.hp1 | a0001 | a0001c0002 | a0001c0002t0004 | a0001c0002t0004g0338 | 1 | 376 | 0.0027 | 32 | c.-32 others(43): Show |
SDAD1 | ENSG00000198301.12 | transcript | ENST00000356260.10 | protein_coding | 3101 | chr4 | TogoVar |